pycom11g07270

Protein of unknown function (DUF674)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000148
Physical Location & Seq
Reverse (-)
5512773 .. 5513957
1185 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g07270.1

Sequence Viewer

Length: 1002 bp
ATGATGAATGTGGAGACCACATTTAAAAGGAAAGAAACCGAAGGTGGTGGGGTTTTTGTTAAAGGACCAGCCAGATTTATAATTAGTGATGATTTACAAGTGCTGCCCCCATTTACTTCTGCAATCTCTTCTTTAGTTGGGTTAAATGGATTTGCGGACTGGAATACCGTTGAGGAGCTGACTTTCGATGTAGGAGCCGATGAGGTTTTGAATGTGCTTATGTGCTCATTAGTATCAAAGACACCTCTGTCCGATACTCTCCTGAAGGATAAAACCGTTCCAAACGTGAGCATCGAATATCTTGACGAAGAAATACACATTGAATCTCAAAAGGTGGAGGACAAAATGAATAAGGAAGAACAAAAGATTCCTATCAAGCTTATAGTGAGCAAATCTAAGAAGAAGGTTTGTTATGCAGAAGCCGGGGTGGATTTCGTTACCTTAATCTTCAGTTTCTTGACTCTACCACTAGGGTTTATAGTAAAACAGATGCAAAATAACTCTATGAAAGGTTGCAATGACCGGCTTTACAGAGGTGTCCGCGATCTTGATGAGCAGTACTTGAAGTCATATCTCCACAAGAAAATGTTGCTGAGTCCGGAGCTTCCCCCTAAATATGGCTATGAGAATCATCCTTTGGGAATTGAGGAATCCTCGTATAAAGATATATCTGGCGTGCCCGCGAAAGTGATTGATTTCGTAGACCCCAAATCGCATGACAATGAAGATGTTAAAGCTTGCGGATTCATGAAAGGACCAGAGATGTTCATGGTAACTGACAATCTCAATGTGAGTCCAATATCTGCAATTCTTGGCATGTCGATACTACGCGAAATGAATGTACCTGTCACTGACGTTGAGGTACGAGTTGCTCATGTGGGCGCGGAAGAGGCGTTCCGTCTTTTGGTGGCTTCTTTTGTTTGCGACGCTGCTCTAACTAGTGCCTTCCTTGCGAAGCCAAAGCGAGATGGAGAACTGGGATGCCTTGGTTTTCTAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

334

Amino Acids

36.95

Weight (kDa)

5.1

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 9 - 295 2.1e-68 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 80
AasI GACNNNNNNGTC 1 cut(s) 247
AccI GTMKAC 1 cut(s) 702
AccII CGCG 4 cut(s) 543, 683, 831, 884
AccIII TCCGGA 1 cut(s) 598
AciI CCGC 5 cut(s) 155, 541, 681, 741, 884
AcuI CTGAAG 2 cut(s) 284, 433
AfaI GTAC 3 cut(s) 560, 843, 864
AfiI CCNNNNNNNGG 2 cut(s) 617, 904
AgsI TTSAA 3 cut(s) 211, 323, 565
AhlI ACTAGT 1 cut(s) 938
AjuI GAANNNNNNNTTGG 2 cut(s) 620, 652
AloI GAACNNNNNNTCC 2 cut(s) 878, 910
AluBI AGCT 4 cut(s) 178, 379, 604, 737
AluI AGCT 4 cut(s) 178, 379, 604, 737
Alw21I GWGCWC 1 cut(s) 227
Alw26I GTCTC 1 cut(s) 8
Aor13HI TCCGGA 1 cut(s) 598
ApeKI GCWGC 2 cut(s) 103, 929
AspLEI GCGC 1 cut(s) 884
AspS9I GGNCC 2 cut(s) 65, 755
AsuC2I CCSGG 1 cut(s) 424
AvaII GGWCC 2 cut(s) 65, 755
BaeGI GKGCMC 1 cut(s) 681
Bbv12I GWGCWC 1 cut(s) 227
BbvI GCAGC 2 cut(s) 90, 916
BccI CCATC 1 cut(s) 962
BcnI CCSGG 1 cut(s) 424
BcoDI GTCTC 1 cut(s) 8
BcuI ACTAGT 1 cut(s) 938
BfaI CTAG 2 cut(s) 470, 939
BisI GCNGC 2 cut(s) 104, 930
BlsI GCNGC 2 cut(s) 105, 931
BmcAI AGTACT 1 cut(s) 560
Bme1390I CCNGG 1 cut(s) 424
Bme18I GGWCC 2 cut(s) 65, 755
BmgT120I GGNCC 2 cut(s) 65, 755
BmiI GGNNCC 1 cut(s) 196
BmrFI CCNGG 1 cut(s) 424
BmrI ACTGGG 1 cut(s) 986
BmsI GCATC 3 cut(s) 300, 480, 971
BmuI ACTGGG 1 cut(s) 986
BplI GAGNNNNNCTC 2 cut(s) 638, 670
BpuMI CCSGG 1 cut(s) 424
BsaBI GATNNNNATC 1 cut(s) 371
BsaI GGTCTC 1 cut(s) 8
BsaJI CCNNGG 2 cut(s) 423, 985
BsaWI WCCGGW 1 cut(s) 598
Bsc4I CCNNNNNNNGG 2 cut(s) 617, 904
Bse118I RCCGGY 1 cut(s) 522
Bse1I ACTGG 2 cut(s) 164, 981
Bse3DI GCAATG 1 cut(s) 523
Bse8I GATNNNNATC 1 cut(s) 371
BseAI TCCGGA 1 cut(s) 598
BseDI CCNNGG 2 cut(s) 423, 985
BseGI GGATG 2 cut(s) 631, 986
BseJI GATNNNNATC 1 cut(s) 371
BseLI CCNNNNNNNGG 2 cut(s) 617, 904
BseMI GCAATG 1 cut(s) 523
BseMII CTCAG 1 cut(s) 584
BseNI ACTGG 2 cut(s) 164, 981
BseRI GAGGAG 1 cut(s) 188
BseSI GKGCMC 1 cut(s) 681
BseXI GCAGC 2 cut(s) 90, 916
Bsh1236I CGCG 4 cut(s) 543, 683, 831, 884
BsiHKAI GWGCWC 1 cut(s) 227
BsiSI CCGG 3 cut(s) 423, 523, 599
BslI CCNNNNNNNGG 2 cut(s) 617, 904
BsmAI GTCTC 1 cut(s) 8
Bso31I GGTCTC 1 cut(s) 8
Bsp1286I GDGCHC 2 cut(s) 227, 681
Bsp13I TCCGGA 1 cut(s) 598
Bsp143I GATC 1 cut(s) 544
BspACI CCGC 5 cut(s) 155, 541, 681, 741, 884
BspCNI CTCAG 1 cut(s) 585
BspEI TCCGGA 1 cut(s) 598
BspFNI CGCG 4 cut(s) 543, 683, 831, 884
BspHI TCATGA 1 cut(s) 747
BspLI GGNNCC 1 cut(s) 196
BspTNI GGTCTC 1 cut(s) 8
BsrDI GCAATG 1 cut(s) 523
BsrFI RCCGGY 1 cut(s) 522
BsrI ACTGG 2 cut(s) 164, 981
BssAI RCCGGY 1 cut(s) 522
BssECI CCNNGG 2 cut(s) 423, 985
BssMI GATC 1 cut(s) 544
BssT1I CCWWGG 1 cut(s) 985
Bst4CI ACNGT 2 cut(s) 169, 277
Bst6I CTCTTC 2 cut(s) 133, 882
BstC8I GCNNGC 3 cut(s) 677, 681, 739
BstDEI CTNAG 3 cut(s) 396, 593, 995
BstF5I GGATG 2 cut(s) 631, 986
BstFNI CGCG 4 cut(s) 543, 683, 831, 884
BstHHI GCGC 1 cut(s) 884
BstKTI GATC 1 cut(s) 547
BstMAI GTCTC 1 cut(s) 8
BstMBI GATC 1 cut(s) 544
BstMWI GCNNNNNNNGC 2 cut(s) 890, 950
BstNSI RCATGY 1 cut(s) 820
BstSCI CCNGG 1 cut(s) 422
BstSLI GKGCMC 1 cut(s) 681
BstUI CGCG 4 cut(s) 543, 683, 831, 884
BstV1I GCAGC 2 cut(s) 90, 916
BtsCI GGATG 2 cut(s) 631, 986
BtsIMutI CAGTG 1 cut(s) 849
Cac8I GCNNGC 3 cut(s) 677, 681, 739
CciI TCATGA 1 cut(s) 747
CfoI GCGC 1 cut(s) 884
Cfr10I RCCGGY 1 cut(s) 522
Cfr13I GGNCC 2 cut(s) 65, 755
CseI GACGC 1 cut(s) 935
Csp6I GTAC 3 cut(s) 559, 842, 863
CviAII CATG 5 cut(s) 716, 748, 769, 817, 875
CviQI GTAC 3 cut(s) 559, 842, 863
DdeI CTNAG 3 cut(s) 396, 593, 995
DpnI GATC 1 cut(s) 546
DpnII GATC 1 cut(s) 544
DraI TTTAAA 1 cut(s) 25
DrdI GACNNNNNNGTC 1 cut(s) 247
DseDI GACNNNNNNGTC 1 cut(s) 247
Eam1104I CTCTTC 2 cut(s) 133, 882
EarI CTCTTC 2 cut(s) 133, 882
Eco130I CCWWGG 1 cut(s) 985
Eco31I GGTCTC 1 cut(s) 8
Eco47I GGWCC 2 cut(s) 65, 755
Eco57I CTGAAG 2 cut(s) 284, 433
EcoT14I CCWWGG 1 cut(s) 985
ErhI CCWWGG 1 cut(s) 985
FaeI CATG 5 cut(s) 719, 751, 772, 820, 878
FatI CATG 5 cut(s) 715, 747, 768, 816, 874
FauI CCCGC 1 cut(s) 688
FblI GTMKAC 1 cut(s) 702
Fnu4HI GCNGC 2 cut(s) 104, 930
FokI GGATG 2 cut(s) 618, 993
Fsp4HI GCNGC 2 cut(s) 104, 930
FspBI CTAG 2 cut(s) 470, 939
GlaI GCGC 1 cut(s) 883
GluI GCNGC 2 cut(s) 104, 930
HapII CCGG 3 cut(s) 423, 523, 599
HgaI GACGC 1 cut(s) 935
HhaI GCGC 1 cut(s) 884
Hin1II CATG 5 cut(s) 719, 751, 772, 820, 878
Hin6I GCGC 1 cut(s) 882
HinP1I GCGC 1 cut(s) 882
HindIII AAGCTT 2 cut(s) 377, 735
HinfI GANTC 8 cut(s) 323, 367, 460, 595, 628, 650, 744, 793
HpaII CCGG 3 cut(s) 423, 523, 599
Hpy166II GTNNAC 1 cut(s) 703
Hpy188I TCNGA 1 cut(s) 253
Hpy188III TCNNGA 6 cut(s) 262, 302, 457, 548, 599, 748
Hpy8I GTNNAC 1 cut(s) 703
Hpy99I CGWCG 1 cut(s) 929
HpyAV CCTTC 4 cut(s) 35, 259, 397, 955
HpyCH4III ACNGT 2 cut(s) 169, 277
HpyCH4IV ACGT 2 cut(s) 285, 855
HpyCH4V TGCA 5 cut(s) 122, 416, 493, 516, 806
HpyF10VI GCNNNNNNNGC 2 cut(s) 890, 950
HpyF3I CTNAG 3 cut(s) 396, 593, 995
HpySE526I ACGT 2 cut(s) 285, 855
Hsp92II CATG 5 cut(s) 719, 751, 772, 820, 878
HspAI GCGC 1 cut(s) 882
Kpn2I TCCGGA 1 cut(s) 598
Kzo9I GATC 1 cut(s) 544
LmnI GCTCC 3 cut(s) 175, 194, 601
Lsp1109I GCAGC 2 cut(s) 90, 916
LweI GCATC 3 cut(s) 300, 480, 971
MaeI CTAG 2 cut(s) 470, 939
MaeII ACGT 2 cut(s) 285, 855
MaeIII GTNAC 3 cut(s) 436, 772, 847
MalI GATC 1 cut(s) 546
MboI GATC 1 cut(s) 544
MboII GAAGA 7 cut(s) 120, 320, 368, 412, 439, 737, 899
MhlI GDGCHC 2 cut(s) 227, 681
MluCI AATT 3 cut(s) 81, 642, 807
MlyI GAGTC 3 cut(s) 454, 604, 802
MnlI CCTC 9 cut(s) 166, 196, 255, 331, 527, 640, 664, 853, 883
MroI TCCGGA 1 cut(s) 598
MseI TTAA 6 cut(s) 24, 60, 143, 443, 732, 1000
MslI CAYNNNNRTG 1 cut(s) 720
MspI CCGG 3 cut(s) 423, 523, 599
MspR9I CCNGG 1 cut(s) 424
MvnI CGCG 4 cut(s) 543, 683, 831, 884
MwoI GCNNNNNNNGC 2 cut(s) 890, 950
NciI CCSGG 1 cut(s) 424
NdeII GATC 1 cut(s) 544
NlaIII CATG 5 cut(s) 719, 751, 772, 820, 878
NlaIV GGNNCC 1 cut(s) 196
NmuCI GTSAC 1 cut(s) 847
NspI RCATGY 1 cut(s) 820
PagI TCATGA 1 cut(s) 747
PcsI WCGNNNNNNNCGW 1 cut(s) 291
PfeI GAWTC 5 cut(s) 323, 367, 628, 650, 744
PkrI GCNGC 2 cut(s) 105, 931
PleI GAGTC 3 cut(s) 454, 603, 801
PpsI GAGTC 3 cut(s) 454, 603, 801
PsiI TTATAA 1 cut(s) 80
PspN4I GGNNCC 1 cut(s) 196
PspPI GGNCC 2 cut(s) 65, 755
RsaI GTAC 3 cut(s) 560, 843, 864
RsaNI GTAC 3 cut(s) 559, 842, 863
RseI CAYNNNNRTG 1 cut(s) 720
SaqAI TTAA 6 cut(s) 24, 60, 143, 443, 732, 1000
SatI GCNGC 2 cut(s) 104, 930
Sau3AI GATC 1 cut(s) 544
Sau96I GGNCC 2 cut(s) 65, 755
ScaI AGTACT 1 cut(s) 560
SchI GAGTC 3 cut(s) 454, 604, 802
ScrFI CCNGG 1 cut(s) 424
SduI GDGCHC 2 cut(s) 227, 681
SfaNI GCATC 3 cut(s) 300, 480, 971
SinI GGWCC 2 cut(s) 65, 755
SmiMI CAYNNNNRTG 1 cut(s) 720
SpeI ACTAGT 1 cut(s) 938
Sse9I AATT 3 cut(s) 81, 642, 807
SsiI CCGC 5 cut(s) 155, 541, 681, 741, 884
SspMI CTAG 2 cut(s) 470, 939
StyD4I CCNGG 1 cut(s) 422
StyI CCWWGG 1 cut(s) 985
TaaI ACNGT 2 cut(s) 169, 277
TaiI ACGT 2 cut(s) 288, 858
TaqI TCGA 3 cut(s) 186, 294, 821
TasI AATT 3 cut(s) 81, 642, 807
TatI WGTACW 1 cut(s) 558
TfiI GAWTC 5 cut(s) 323, 367, 628, 650, 744
Tru1I TTAA 6 cut(s) 24, 60, 143, 443, 732, 1000
Tru9I TTAA 6 cut(s) 24, 60, 143, 443, 732, 1000
TscAI CASTG 1 cut(s) 856
TseFI GTSAC 1 cut(s) 847
TseI GCWGC 2 cut(s) 103, 929
Tsp45I GTSAC 1 cut(s) 847
TspDTI ATGAA 8 cut(s) 20, 362, 521, 736, 738, 757, 764, 851
TspGWI ACGGA 1 cut(s) 887
TspRI CASTG 1 cut(s) 856
VpaK11BI GGWCC 2 cut(s) 65, 755
XceI RCATGY 1 cut(s) 820
XmiI GTMKAC 1 cut(s) 702
XspI CTAG 2 cut(s) 470, 939
ZrmI AGTACT 1 cut(s) 560
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.