Rorug05G0385300

Protein of unknown function (DUF674)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
52301237 .. 52301431
195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0385300.1

Sequence Viewer

Length: 195 bp
ATGGTTATTGAAGTCGATAACCAGGCGAACTATAATATCACTCTTCACTGGCACGGAGTTAGACGAGTAAGAAATCCTTGGTCGGATGGACCAGAGTATATCACACAATGCCCTATACAGCCAGGAAACAAGTACACTTACAGAATTGTGTTTACTACAGAAGAAGGAACAATATGGTGGCCGGCCTGCACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

64

Amino Acids

7.57

Weight (kDa)

6.01

Isoelectric Point (pI)

56.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 2 - 61 3.6e-22 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 179
AfaI GTAC 1 cut(s) 134
AgsI TTSAA 1 cut(s) 11
AjnI CCWGG 2 cut(s) 21, 121
AoxI GGCC 2 cut(s) 179, 183
AspS9I GGNCC 1 cut(s) 89
AvaII GGWCC 1 cut(s) 89
BccI CCATC 1 cut(s) 80
BciT130I CCWGG 2 cut(s) 23, 123
BfmI CTRYAG 1 cut(s) 156
Bme1390I CCNGG 2 cut(s) 23, 123
Bme18I GGWCC 1 cut(s) 89
BmgT120I GGNCC 1 cut(s) 89
BmrFI CCNGG 2 cut(s) 23, 123
BsaJI CCNNGG 1 cut(s) 77
Bse118I RCCGGY 1 cut(s) 181
Bse1I ACTGG 1 cut(s) 53
BseBI CCWGG 2 cut(s) 23, 123
BseDI CCNNGG 1 cut(s) 77
BseGI GGATG 1 cut(s) 91
BseNI ACTGG 1 cut(s) 53
BsgI GTGCAG 1 cut(s) 172
BshFI GGCC 2 cut(s) 181, 185
BsiSI CCGG 1 cut(s) 182
BsnI GGCC 2 cut(s) 181, 185
BspANI GGCC 2 cut(s) 181, 185
BsrFI RCCGGY 1 cut(s) 181
BsrI ACTGG 1 cut(s) 53
BssAI RCCGGY 1 cut(s) 181
BssECI CCNNGG 1 cut(s) 77
BssT1I CCWWGG 1 cut(s) 77
Bst2UI CCWGG 2 cut(s) 23, 123
Bst6I CTCTTC 1 cut(s) 48
BstC8I GCNNGC 2 cut(s) 183, 187
BstF5I GGATG 1 cut(s) 91
BstNI CCWGG 2 cut(s) 23, 123
BstSCI CCNGG 2 cut(s) 21, 121
BstSFI CTRYAG 1 cut(s) 156
BsuRI GGCC 2 cut(s) 181, 185
BtsCI GGATG 1 cut(s) 91
BtsIMutI CAGTG 1 cut(s) 46
Cac8I GCNNGC 2 cut(s) 183, 187
Cfr10I RCCGGY 1 cut(s) 181
Cfr13I GGNCC 1 cut(s) 89
Csp6I GTAC 1 cut(s) 133
CviJI RGCY 3 cut(s) 121, 181, 185
CviKI_1 RGCY 3 cut(s) 121, 181, 185
CviQI GTAC 1 cut(s) 133
EaeI YGGCCR 1 cut(s) 179
Eam1104I CTCTTC 1 cut(s) 48
EarI CTCTTC 1 cut(s) 48
Eco130I CCWWGG 1 cut(s) 77
Eco47I GGWCC 1 cut(s) 89
EcoRII CCWGG 2 cut(s) 21, 121
EcoT14I CCWWGG 1 cut(s) 77
ErhI CCWWGG 1 cut(s) 77
FaiI YATR 5 cut(s) 33, 99, 116, 175, 193
FalI AAGNNNNNCTT 2 cut(s) 61, 93
FokI GGATG 1 cut(s) 98
FseI GGCCGGCC 1 cut(s) 185
HaeIII GGCC 2 cut(s) 181, 185
HapII CCGG 1 cut(s) 182
HpaII CCGG 1 cut(s) 182
Hpy166II GTNNAC 2 cut(s) 135, 153
Hpy188I TCNGA 1 cut(s) 85
Hpy8I GTNNAC 2 cut(s) 135, 153
HpyAV CCTTC 1 cut(s) 158
HpyCH4V TGCA 1 cut(s) 189
KroI GCCGGC 1 cut(s) 181
KroNI GCCGGC 1 cut(s) 183
LpnPI CCDG 6 cut(s) 8, 34, 35, 105, 108, 135
MboII GAAGA 2 cut(s) 35, 173
MluCI AATT 1 cut(s) 144
MmeI TCCRAC 1 cut(s) 63
MroNI GCCGGC 1 cut(s) 181
MspI CCGG 1 cut(s) 182
MspR9I CCNGG 2 cut(s) 23, 123
MvaI CCWGG 2 cut(s) 23, 123
NaeI GCCGGC 1 cut(s) 183
NgoMIV GCCGGC 1 cut(s) 181
PdiI GCCGGC 1 cut(s) 183
Psp6I CCWGG 2 cut(s) 21, 121
PspGI CCWGG 2 cut(s) 21, 121
PspPI GGNCC 1 cut(s) 89
RigI GGCCGGCC 1 cut(s) 185
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
Sau96I GGNCC 1 cut(s) 89
ScrFI CCNGG 2 cut(s) 23, 123
SfcI CTRYAG 1 cut(s) 156
SinI GGWCC 1 cut(s) 89
Sse9I AATT 1 cut(s) 144
StyD4I CCNGG 2 cut(s) 21, 121
StyI CCWWGG 1 cut(s) 77
TaqI TCGA 1 cut(s) 15
TasI AATT 1 cut(s) 144
TatI WGTACW 1 cut(s) 132
TscAI CASTG 1 cut(s) 53
TspGWI ACGGA 1 cut(s) 69
TspRI CASTG 1 cut(s) 53
VpaK11BI GGWCC 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.