Rorug05G0386000

Protein of unknown function (DUF674)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000148
Physical Location & Seq
Forward (+)
52404278 .. 52408551
4274 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0386000.1

Sequence Viewer

Length: 1548 bp
ATGGAGCTGCTTCAATCTCCTTCCTTACAAGCTCTGCTTATATTTTCTCTCTTTCTCATTGCACTACTGAAAATAGCCAAGCGAGGCAAAACCAAAGACTCCACTTCAAACTTACCCCCCGGACCATGGACGCTACCCTTCATAGGAAACTTGCACCAGCTCGTTGACTGTCTACCCCATCACGGCCTCAGAGACTTGGCTGAGATATATGGACCTCTTATGTACTTGAGGCTTGGAGAAGTTCCAACCCTAGTTGTTTCGTCAGCAGAGTGTGCCAAGGAGGTGATGAAAACCCACGACGCCATCTTTGCAACGAGACCCCATACCCTTGCTACCAGGATCTTGACTTACCGTGGTACAAACATTGGTTTTTCACCATATGGTGAATACTGGAGAGAACTACGAAAGATTTGCATGCTAGAGCTTTTAAGCACAAAGCGTGTCCAATCGTTTCGACGAATTAGGGAAGAAGAGGTCTTGAAACTCATTAAATGGATTGCATCAAGGCCGGGATCACCCATCAATCTCACTGAGGAAATCTACTCATGCACATACTGCATAACTTCGAGAGCAGCCTTTGGTAAAAAAAGTAAAGACCATGAAAAAGCCATTTATATTGGGAAGGAAGCTGCAAAAGTGACAGGAGGCTTTGCACTTGCAGATTTTTTCCCTTCCGTCAATTTGCTGCATGTGATTAGTGGAATGAGAACTAAACTCGAGAAGCTGCATAATGAAGCTGACATGATAATGGAAGATATCATCAAAGAACATAAAGAAGGCAAGACAACAACAAAATCTCAGGGCGAGGGTAAAGCAGAGGAAGACTTGGTAGATGTACTCTTAAAGTATCACGATCATAGTTGCCTGAAGTTTTCTCTAACTGTTGAAAACATCAAAGCTGTAATCCAGGACATCTTTGGTGCTGGAAGTGAGACATCATCCACAGTTGTGGATTGGGTAATGGCAGAGATGATAAAGAATCCAAGAACAATGAAAATGGCACAAGATGAGGTGAGAGAAGTGTTTAACAGAAAAGGACATGTTGATGAAACTGGCATCAAGGATATGAAATATTTGAACTTAGTTATCAAAGAGACATTGAGATTACACCCTTCTGCTCCCTTGCTACTTCCGAGAGAATGCAGAGAGACCTGTGAGATAGCTGGATATAAAATACCCGTCAAAACAAAGGTAGTTATTAATGCATGGGCAATTGGTAGAGATCCAAAGTTCTGGACGGAGCCTGAAATCTTTTATCCTGAACGGTTCGTTGATAGCTCTATTGACTACAAGGGAACCAATTTTGAATATATCCCGTTTGGTGCTGGAAGGAGAATATGTCCGGGGATTTCCTATGGTCTGGCGAATGTGGAGCTCCCAGTTGCTTTGTTGTTGTATTATTTTGATTGGAAACTCCCCAATGAAATGAAGAATGAAGACCTGGACATGACTGAGGCTTTCGGTGTTACTGTTCGCCGAAAAGAAGATTTACACTTGATTCCCACTCCCTGTTATCCTCCGCCTACTACAAGAGTCTACGAGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

515

Amino Acids

58.57

Weight (kDa)

7.91

Isoelectric Point (pI)

40.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 39 - 494 6e-96 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 172, 1536
AciI CCGC 1 cut(s) 1520
AclWI GGATC 3 cut(s) 347, 520, 1217
AcuI CTGAAG 1 cut(s) 887
AcyI GRCGYC 1 cut(s) 300
AfaI GTAC 3 cut(s) 224, 358, 837
AfiI CCNNNNNNNGG 3 cut(s) 126, 143, 182
AflIII ACRYGT 1 cut(s) 1039
AgsI TTSAA 6 cut(s) 14, 108, 481, 887, 1078, 1307
AjnI CCWGG 3 cut(s) 335, 906, 1440
AleI CACNNNNGTG 1 cut(s) 947
Alw21I GWGCWC 1 cut(s) 1377
Alw26I GTCTC 5 cut(s) 186, 310, 926, 1088, 1142
AlwI GGATC 3 cut(s) 347, 520, 1217
Ama87I CYCGRG 1 cut(s) 716
AoxI GGCC 2 cut(s) 184, 506
ApeKI GCWGC 5 cut(s) 7, 572, 629, 685, 724
ArsI GACNNNNNNTTYG 2 cut(s) 290, 322
AseI ATTAAT 1 cut(s) 1200
AspS9I GGNCC 2 cut(s) 122, 212
AsuC2I CCSGG 3 cut(s) 120, 510, 1344
AsuHPI GGTGA 5 cut(s) 295, 366, 395, 507, 1024
AvaI CYCGRG 1 cut(s) 716
AvaII GGWCC 2 cut(s) 122, 212
BanII GRGCYC 1 cut(s) 1377
BbsI GAAGAC 2 cut(s) 828, 1443
Bbv12I GWGCWC 1 cut(s) 1377
BbvI GCAGC 4 cut(s) 584, 616, 672, 711
BccI CCATC 3 cut(s) 186, 311, 527
BceAI ACGGC 1 cut(s) 199
BcgI CGANNNNNNTGC 2 cut(s) 393, 427
BciT130I CCWGG 3 cut(s) 337, 908, 1442
BcnI CCSGG 3 cut(s) 120, 510, 1344
BcoDI GTCTC 5 cut(s) 186, 310, 926, 1088, 1142
BfaI CTAG 2 cut(s) 251, 419
BisI GCNGC 5 cut(s) 8, 573, 630, 686, 725
BlsI GCNGC 5 cut(s) 9, 574, 631, 687, 726
Bme1390I CCNGG 6 cut(s) 120, 337, 510, 908, 1344, 1442
Bme18I GGWCC 2 cut(s) 122, 212
BmeT110I CYCGRG 1 cut(s) 716
BmgT120I GGNCC 2 cut(s) 122, 212
BmiI GGNNCC 2 cut(s) 1242, 1297
BmrFI CCNGG 6 cut(s) 120, 337, 510, 908, 1344, 1442
BmrI ACTGGG 1 cut(s) 1373
BmsI GCATC 2 cut(s) 509, 1065
BmuI ACTGGG 1 cut(s) 1373
BpiI GAAGAC 2 cut(s) 828, 1443
BpmI CTGGAG 1 cut(s) 412
BpuEI CTTGAG 1 cut(s) 247
BpuMI CCSGG 3 cut(s) 120, 510, 1344
BsaHI GRCGYC 1 cut(s) 300
BsaI GGTCTC 2 cut(s) 310, 1142
BsaJI CCNNGG 5 cut(s) 118, 125, 276, 352, 1343
BsaXI ACNNNNNCTCC 2 cut(s) 1324, 1354
Bsc4I CCNNNNNNNGG 3 cut(s) 126, 143, 182
Bse1I ACTGG 3 cut(s) 395, 1057, 1379
Bse3DI GCAATG 1 cut(s) 57
BseBI CCWGG 3 cut(s) 337, 908, 1442
BseDI CCNNGG 5 cut(s) 118, 125, 276, 352, 1343
BseGI GGATG 1 cut(s) 938
BseLI CCNNNNNNNGG 3 cut(s) 126, 143, 182
BseMI GCAATG 1 cut(s) 57
BseMII CTCAG 5 cut(s) 192, 202, 522, 812, 1443
BseNI ACTGG 3 cut(s) 395, 1057, 1379
BseXI GCAGC 4 cut(s) 584, 616, 672, 711
BshFI GGCC 2 cut(s) 186, 508
BsiHKAI GWGCWC 1 cut(s) 1377
BsiHKCI CYCGRG 1 cut(s) 716
BsiSI CCGG 3 cut(s) 120, 509, 1343
BslI CCNNNNNNNGG 3 cut(s) 126, 143, 182
BsmAI GTCTC 5 cut(s) 186, 310, 926, 1088, 1142
BsmI GAATGC 1 cut(s) 1145
BsnI GGCC 2 cut(s) 186, 508
Bso31I GGTCTC 2 cut(s) 310, 1142
BsoBI CYCGRG 1 cut(s) 716
Bsp1286I GDGCHC 1 cut(s) 1377
Bsp143I GATC 4 cut(s) 339, 512, 853, 1222
Bsp19I CCATGG 1 cut(s) 125
BspACI CCGC 1 cut(s) 1520
BspANI GGCC 2 cut(s) 186, 508
BspCNI CTCAG 5 cut(s) 193, 201, 523, 811, 1444
BspLI GGNNCC 2 cut(s) 1242, 1297
BspPI GGATC 3 cut(s) 347, 520, 1217
BspTNI GGTCTC 2 cut(s) 310, 1142
BsrDI GCAATG 1 cut(s) 57
BsrI ACTGG 3 cut(s) 395, 1057, 1379
BssECI CCNNGG 5 cut(s) 118, 125, 276, 352, 1343
BssMI GATC 4 cut(s) 339, 512, 853, 1222
BssNI GRCGYC 1 cut(s) 300
BssT1I CCWWGG 2 cut(s) 125, 276
Bst2UI CCWGG 3 cut(s) 337, 908, 1442
Bst4CI ACNGT 6 cut(s) 170, 353, 883, 946, 1266, 1471
Bst6I CTCTTC 1 cut(s) 465
BstACI GRCGYC 1 cut(s) 300
BstAPI GCANNNNNTGC 2 cut(s) 272, 555
BstC8I GCNNGC 1 cut(s) 416
BstDEI CTNAG 6 cut(s) 188, 201, 531, 798, 1081, 1452
BstDSI CCRYGG 2 cut(s) 125, 352
BstF5I GGATG 1 cut(s) 938
BstKTI GATC 4 cut(s) 342, 515, 856, 1225
BstMAI GTCTC 5 cut(s) 186, 310, 926, 1088, 1142
BstMBI GATC 4 cut(s) 339, 512, 853, 1222
BstMWI GCNNNNNNNGC 3 cut(s) 272, 308, 555
BstNI CCWGG 3 cut(s) 337, 908, 1442
BstNSI RCATGY 3 cut(s) 418, 692, 1043
BstSCI CCNGG 6 cut(s) 118, 335, 508, 906, 1342, 1440
BstV1I GCAGC 4 cut(s) 584, 616, 672, 711
BstV2I GAAGAC 2 cut(s) 828, 1443
BstX2I RGATCY 2 cut(s) 339, 1222
BstXI CCANNNNNNTGG 2 cut(s) 949, 1233
BstYI RGATCY 2 cut(s) 339, 1222
BsuRI GGCC 2 cut(s) 186, 508
BtgI CCRYGG 2 cut(s) 125, 352
BtsCI GGATG 1 cut(s) 938
BtsIMutI CAGTG 1 cut(s) 528
Cac8I GCNNGC 1 cut(s) 416
Cfr13I GGNCC 2 cut(s) 122, 212
CseI GACGC 2 cut(s) 139, 308
Csp6I GTAC 3 cut(s) 223, 357, 836
CviAII CATG 9 cut(s) 126, 415, 546, 599, 689, 742, 1040, 1206, 1447
CviQI GTAC 3 cut(s) 223, 357, 836
DdeI CTNAG 6 cut(s) 188, 201, 531, 798, 1081, 1452
DpnI GATC 4 cut(s) 341, 514, 855, 1224
DpnII GATC 4 cut(s) 339, 512, 853, 1222
Eam1104I CTCTTC 1 cut(s) 465
EarI CTCTTC 1 cut(s) 465
EciI GGCGGA 1 cut(s) 1509
Ecl136II GAGCTC 1 cut(s) 1375
Eco130I CCWWGG 2 cut(s) 125, 276
Eco24I GRGCYC 1 cut(s) 1377
Eco31I GGTCTC 2 cut(s) 310, 1142
Eco32I GATATC 1 cut(s) 757
Eco47I GGWCC 2 cut(s) 122, 212
Eco53kI GAGCTC 1 cut(s) 1375
Eco57I CTGAAG 1 cut(s) 887
Eco88I CYCGRG 1 cut(s) 716
EcoICRI GAGCTC 1 cut(s) 1375
EcoRII CCWGG 3 cut(s) 335, 906, 1440
EcoRV GATATC 1 cut(s) 757
EcoT14I CCWWGG 2 cut(s) 125, 276
EcoT22I ATGCAT 1 cut(s) 1207
EcoT38I GRGCYC 1 cut(s) 1377
ErhI CCWWGG 2 cut(s) 125, 276
FaeI CATG 9 cut(s) 129, 418, 549, 602, 692, 745, 1043, 1209, 1450
FalI AAGNNNNNCTT 2 cut(s) 21, 53
FatI CATG 9 cut(s) 125, 414, 545, 598, 688, 741, 1039, 1205, 1446
FauNDI CATATG 1 cut(s) 379
FblI GTMKAC 2 cut(s) 172, 1536
Fnu4HI GCNGC 5 cut(s) 8, 573, 630, 686, 725
FokI GGATG 1 cut(s) 925
FriOI GRGCYC 1 cut(s) 1377
Fsp4HI GCNGC 5 cut(s) 8, 573, 630, 686, 725
FspBI CTAG 2 cut(s) 251, 419
GluI GCNGC 5 cut(s) 8, 573, 630, 686, 725
GsuI CTGGAG 1 cut(s) 412
HaeIII GGCC 2 cut(s) 186, 508
HapII CCGG 3 cut(s) 120, 509, 1343
HgaI GACGC 2 cut(s) 139, 308
Hin1I GRCGYC 1 cut(s) 300
Hin1II CATG 9 cut(s) 129, 418, 549, 602, 692, 745, 1043, 1209, 1450
HincII GTYRAC 1 cut(s) 166
HindII GTYRAC 1 cut(s) 166
HinfI GANTC 4 cut(s) 98, 979, 1498, 1533
HpaII CCGG 3 cut(s) 120, 509, 1343
HphI GGTGA 5 cut(s) 295, 366, 395, 507, 1024
Hpy166II GTNNAC 3 cut(s) 166, 173, 1537
Hpy188I TCNGA 2 cut(s) 191, 1134
Hpy188III TCNNGA 7 cut(s) 343, 478, 567, 718, 851, 1234, 1259
Hpy8I GTNNAC 3 cut(s) 166, 173, 1537
Hpy99I CGWCG 2 cut(s) 302, 459
HpyAV CCTTC 7 cut(s) 30, 148, 616, 681, 770, 1122, 1323
HpyCH4III ACNGT 6 cut(s) 170, 353, 883, 946, 1266, 1471
HpyF10VI GCNNNNNNNGC 3 cut(s) 272, 308, 555
HpyF3I CTNAG 6 cut(s) 188, 201, 531, 798, 1081, 1452
Hsp92I GRCGYC 1 cut(s) 300
Hsp92II CATG 9 cut(s) 129, 418, 549, 602, 692, 745, 1043, 1209, 1450
Kzo9I GATC 4 cut(s) 339, 512, 853, 1222
LmnI GCTCC 5 cut(s) 4, 1123, 1240, 1372, 1380
Lsp1109I GCAGC 4 cut(s) 584, 616, 672, 711
LweI GCATC 2 cut(s) 509, 1065
MaeI CTAG 2 cut(s) 251, 419
MaeIII GTNAC 2 cut(s) 637, 1465
MalI GATC 4 cut(s) 341, 514, 855, 1224
MboI GATC 4 cut(s) 339, 512, 853, 1222
MboII GAAGA 7 cut(s) 479, 482, 764, 833, 1441, 1448, 1496
MfeI CAATTG 1 cut(s) 1212
MflI RGATCY 2 cut(s) 339, 1222
MhlI GDGCHC 1 cut(s) 1377
MluCI AATT 4 cut(s) 459, 679, 1212, 1300
MlyI GAGTC 2 cut(s) 92, 1542
MmeI TCCRAC 1 cut(s) 269
Mph1103I ATGCAT 1 cut(s) 1207
MseI TTAA 6 cut(s) 428, 489, 842, 1026, 1200, 1546
MslI CAYNNNNRTG 3 cut(s) 746, 947, 1044
MspI CCGG 3 cut(s) 120, 509, 1343
MspR9I CCNGG 6 cut(s) 120, 337, 510, 908, 1344, 1442
MunI CAATTG 1 cut(s) 1212
Mva1269I GAATGC 1 cut(s) 1145
MvaI CCWGG 3 cut(s) 337, 908, 1442
MwoI GCNNNNNNNGC 3 cut(s) 272, 308, 555
NciI CCSGG 3 cut(s) 120, 510, 1344
NcoI CCATGG 1 cut(s) 125
NdeI CATATG 1 cut(s) 379
NdeII GATC 4 cut(s) 339, 512, 853, 1222
NlaIII CATG 9 cut(s) 129, 418, 549, 602, 692, 745, 1043, 1209, 1450
NlaIV GGNNCC 2 cut(s) 1242, 1297
NmuCI GTSAC 1 cut(s) 637
NsiI ATGCAT 1 cut(s) 1207
NspI RCATGY 3 cut(s) 418, 692, 1043
OliI CACNNNNGTG 1 cut(s) 947
PaeI GCATGC 1 cut(s) 418
PaeR7I CTCGAG 1 cut(s) 716
PciI ACATGT 1 cut(s) 1039
PctI GAATGC 1 cut(s) 1145
PfeI GAWTC 2 cut(s) 979, 1498
PfoI TCCNGGA 1 cut(s) 906
PkrI GCNGC 5 cut(s) 9, 574, 631, 687, 726
PleI GAGTC 2 cut(s) 92, 1541
PpsI GAGTC 2 cut(s) 92, 1541
PscI ACATGT 1 cut(s) 1039
PshBI ATTAAT 1 cut(s) 1200
Psp124BI GAGCTC 1 cut(s) 1377
Psp6I CCWGG 3 cut(s) 335, 906, 1440
PspGI CCWGG 3 cut(s) 335, 906, 1440
PspN4I GGNNCC 2 cut(s) 1242, 1297
PspPI GGNCC 2 cut(s) 122, 212
PsuI RGATCY 2 cut(s) 339, 1222
RsaI GTAC 3 cut(s) 224, 358, 837
RsaNI GTAC 3 cut(s) 223, 357, 836
RseI CAYNNNNRTG 3 cut(s) 746, 947, 1044
SacI GAGCTC 1 cut(s) 1377
SaqAI TTAA 6 cut(s) 428, 489, 842, 1026, 1200, 1546
SatI GCNGC 5 cut(s) 8, 573, 630, 686, 725
Sau3AI GATC 4 cut(s) 339, 512, 853, 1222
Sau96I GGNCC 2 cut(s) 122, 212
SchI GAGTC 2 cut(s) 92, 1542
ScrFI CCNGG 6 cut(s) 120, 337, 510, 908, 1344, 1442
SduI GDGCHC 1 cut(s) 1377
SfaNI GCATC 2 cut(s) 509, 1065
Sfr274I CTCGAG 1 cut(s) 716
SinI GGWCC 2 cut(s) 122, 212
SlaI CTCGAG 1 cut(s) 716
SmiMI CAYNNNNRTG 3 cut(s) 746, 947, 1044
SmlI CTYRAG 2 cut(s) 226, 716
SmoI CTYRAG 2 cut(s) 226, 716
SphI GCATGC 1 cut(s) 418
Sse9I AATT 4 cut(s) 459, 679, 1212, 1300
SsiI CCGC 1 cut(s) 1520
SspI AATATT 1 cut(s) 1073
SspMI CTAG 2 cut(s) 251, 419
SstI GAGCTC 1 cut(s) 1377
StyD4I CCNGG 6 cut(s) 118, 335, 508, 906, 1342, 1440
StyI CCWWGG 2 cut(s) 125, 276
TaaI ACNGT 6 cut(s) 170, 353, 883, 946, 1266, 1471
TaqI TCGA 3 cut(s) 454, 566, 717
TasI AATT 4 cut(s) 459, 679, 1212, 1300
TatI WGTACW 2 cut(s) 222, 835
TfiI GAWTC 2 cut(s) 979, 1498
Tru1I TTAA 6 cut(s) 428, 489, 842, 1026, 1200, 1546
Tru9I TTAA 6 cut(s) 428, 489, 842, 1026, 1200, 1546
TscAI CASTG 1 cut(s) 535
TseFI GTSAC 1 cut(s) 637
TseI GCWGC 5 cut(s) 7, 572, 629, 685, 724
Tsp45I GTSAC 1 cut(s) 637
TspGWI ACGGA 2 cut(s) 664, 1253
TspRI CASTG 1 cut(s) 535
VpaK11BI GGWCC 2 cut(s) 122, 212
VspI ATTAAT 1 cut(s) 1200
XceI RCATGY 3 cut(s) 418, 692, 1043
XcmI CCANNNNNNNNNTGG 1 cut(s) 914
XhoI CTCGAG 1 cut(s) 716
XmiI GTMKAC 2 cut(s) 172, 1536
XspI CTAG 2 cut(s) 251, 419
Zsp2I ATGCAT 1 cut(s) 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.