FvH4_3g37590

BEST Arabidopsis thaliana protein match is Protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000148
Physical Location & Seq
Forward (+)
32228715 .. 32232447
3733 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g37590.t3

Sequence Viewer

Length: 1482 bp
ATGGCTGATACATCCAACAGCATTAGCTTGAAAGCCATGGTGGACAAAGCTAGTAACCAAATTATCTTTGTGGAGTCTGATAGTGATTTCATTGATGTTATCTTTAGTTTCTTAACAATACCCATGGGAAACCTTATCAGGCTGGCCCCGAATCAATCAATATTGGGCATTGGTTGCATGAATAAGTTGTATTCAAGTGTTAAGAATATGGATGTGAAGCATTTACAAACTGAAGCCTGTAAAGACATGTTGCTATCTCCCCGGAGTGTGGCTGAGTCTCAATGCAAGAACCTCAAAGTGAAGATTGACAAGGATGAGGCTACACAGTTCTTTATGTGCTCACATAACAGAGTTGATTGCAAGTTAAGTTATTGCAAATTTGATTCTTGTGCTAGTTGTGGAGGAAGCATAAATAAGGAGAAAAATCTTCTAGTGACTGATGGAGGTGTGTTTGTGAAAGGACTATCCAGGCTCATAATTAGTGATGATTTAAAAGTGATTCCACCATTAACTGCAGCAGGCCTGCCTCTTTGTGCAAAGTTTGGAGTCATGGATGGGAATGCTACTGAGGAGGTGACGATCAATGTGGGAGTTGATGAGGTTCTGAATTTGCTTATGCGCTCAATAGCATCAAAGACACCTTTGACAGAATCTCTGCTGAAGAGTAAACCAAGACTAAAATTTTGCAATAAAAATCAAAGAATACATACCGAACCTCAAATGGCAAAAGACAATACACTTTCTGAAGGAACCATTTCTATCAGGCCTATAGTGAGCAAATCAAAGAAGATGGTTTGTTACGCGGAAGCAGGGGAGGGTTTTGTTAATTTGCTCTTAAGTTTCTTAAATATTCCGCTGGGGTTTATTGTTAAACACATGGGTAATTGCTCATCGCAAGGATGCATTGATCAGTTGTACAAGAGTGTCCAGGATCTTGATGATCAGTATATATTGTCAAGCTACCACAAAGAAATGCTACTCACTCCTAAACTTGTCCCTGGGTTTTGCTATGAGAACCATCTATTAGGCACTGAGGAAGCCACATATTATTATGCTGGTTCAACAGGTTTTCTGTCTACTGATAAGGCCCTTCTTGCTACTCGAACTGCCCAAGCTACTAAATCTATCAGGTCATACTGCAGTCAAGAAAGTGCGCTCACTTCAATAAGGCCAATTGCTGTTAGGGATCCCAAAGCCAACCATCACGAACATAAAAGTGCTCAAGCTCAAGGGTATTTGAAAGGACCAGCAATGTTCACAGTGACTGACGATTTGGACATAAGACCTGTATCTCTAATCCTTGGCCTGTCTCTTCTGAACAAATTGGAGGTACCTTTGACTGACATTGAAGTGCAAACAGTGCAGGTGCACAAAGAGGAGGCCTTGCATCTTCTGGTAGCTTCTTTTCTTGGTGACTCTGCTCTAACTGATACCTTCGTTAGGAAGCCAGAGCAAAACAAAAGGATTAAGCAAGAACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

494

Amino Acids

54.35

Weight (kDa)

7.49

Isoelectric Point (pI)

36.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 6 - 458 8.4e-123 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1354
Acc36I ACCTGC 1 cut(s) 1354
Acc65I GGTACC 1 cut(s) 1330
AccB1I GGYRCC 1 cut(s) 1330
AccI GTMKAC 1 cut(s) 1076
AccII CGCG 1 cut(s) 803
AciI CCGC 2 cut(s) 803, 854
AclWI GGATC 3 cut(s) 939, 1181, 1194
AcsI RAATTY 3 cut(s) 377, 607, 680
AcuI CTGAAG 3 cut(s) 252, 680, 765
AfaI GTAC 2 cut(s) 917, 1332
AfiI CCNNNNNNNGG 2 cut(s) 268, 1440
AflII CTTAAG 1 cut(s) 835
AflIII ACRYGT 1 cut(s) 246
AgsI TTSAA 6 cut(s) 31, 195, 1062, 1164, 1240, 1349
AjnI CCWGG 3 cut(s) 467, 927, 997
AluBI AGCT 6 cut(s) 27, 50, 960, 1115, 1226, 1400
AluI AGCT 6 cut(s) 27, 50, 960, 1115, 1226, 1400
Alw21I GWGCWC 3 cut(s) 341, 1222, 1371
Alw26I GTCTC 2 cut(s) 282, 1314
Alw44I GTGCAC 1 cut(s) 1367
AlwI GGATC 3 cut(s) 939, 1181, 1194
AlwNI CAGNNNCTG 1 cut(s) 1265
AoxI GGCC 7 cut(s) 144, 520, 764, 1086, 1169, 1303, 1380
ApaLI GTGCAC 1 cut(s) 1367
ApeKI GCWGC 1 cut(s) 515
ApoI RAATTY 3 cut(s) 377, 607, 680
ArsI GACNNNNNNTTYG 4 cut(s) 666, 698, 1255, 1287
Asp700I GAANNNNTTC 1 cut(s) 754
Asp718I GGTACC 1 cut(s) 1330
AspLEI GCGC 2 cut(s) 621, 1156
AspS9I GGNCC 3 cut(s) 145, 1087, 1244
AsuC2I CCSGG 1 cut(s) 262
AsuHPI GGTGA 2 cut(s) 586, 1424
AvaII GGWCC 1 cut(s) 1244
BaeGI GKGCMC 1 cut(s) 1371
BaeI ACNNNNGTAYC 2 cut(s) 1422, 1455
BamHI GGATCC 1 cut(s) 1186
BanI GGYRCC 1 cut(s) 1330
Bbv12I GWGCWC 3 cut(s) 341, 1222, 1371
BbvI GCAGC 1 cut(s) 527
BccI CCATC 5 cut(s) 434, 548, 784, 1026, 1209
BciT130I CCWGG 3 cut(s) 469, 929, 999
BclI TGATCA 2 cut(s) 907, 940
BcnI CCSGG 1 cut(s) 262
BcoDI GTCTC 2 cut(s) 282, 1314
BfaI CTAG 3 cut(s) 51, 393, 431
BfmI CTRYAG 3 cut(s) 513, 768, 1138
BfrI CTTAAG 1 cut(s) 835
BfuAI ACCTGC 1 cut(s) 1354
BisI GCNGC 1 cut(s) 516
BlsI GCNGC 1 cut(s) 517
Bme1390I CCNGG 4 cut(s) 262, 469, 929, 999
Bme18I GGWCC 1 cut(s) 1244
BmgT120I GGNCC 3 cut(s) 145, 1087, 1244
BmiI GGNNCC 4 cut(s) 147, 751, 1188, 1332
BmrFI CCNGG 4 cut(s) 262, 469, 929, 999
BmsI GCATC 3 cut(s) 638, 890, 1396
BpuEI CTTGAG 2 cut(s) 1206, 1212
BpuMI CCSGG 1 cut(s) 262
BsaJI CCNNGG 6 cut(s) 36, 123, 260, 997, 998, 1300
Bsc4I CCNNNNNNNGG 2 cut(s) 268, 1440
Bse3DI GCAATG 1 cut(s) 1257
BseBI CCWGG 3 cut(s) 469, 929, 999
BseDI CCNNGG 6 cut(s) 36, 123, 260, 997, 998, 1300
BseGI GGATG 5 cut(s) 11, 217, 319, 559, 905
BseLI CCNNNNNNNGG 2 cut(s) 268, 1440
BseMI GCAATG 1 cut(s) 1257
BseMII CTCAG 3 cut(s) 264, 558, 1023
BseRI GAGGAG 2 cut(s) 584, 1391
BseSI GKGCMC 1 cut(s) 1371
BseXI GCAGC 1 cut(s) 527
BseYI CCCAGC 1 cut(s) 856
BsgI GTGCAG 1 cut(s) 1382
Bsh1236I CGCG 1 cut(s) 803
BshFI GGCC 7 cut(s) 146, 522, 766, 1088, 1171, 1305, 1382
BshNI GGYRCC 1 cut(s) 1330
BsiHKAI GWGCWC 3 cut(s) 341, 1222, 1371
BsiSI CCGG 1 cut(s) 262
BslFI GGGAC 1 cut(s) 980
BslI CCNNNNNNNGG 2 cut(s) 268, 1440
BsmAI GTCTC 2 cut(s) 282, 1314
BsmFI GGGAC 1 cut(s) 980
BsmI GAATGC 1 cut(s) 565
BsnI GGCC 7 cut(s) 146, 522, 766, 1088, 1171, 1305, 1382
Bsp1286I GDGCHC 3 cut(s) 341, 1222, 1371
Bsp1407I TGTACA 1 cut(s) 915
Bsp143I GATC 5 cut(s) 579, 907, 931, 940, 1186
Bsp19I CCATGG 2 cut(s) 36, 123
BspACI CCGC 2 cut(s) 803, 854
BspANI GGCC 7 cut(s) 146, 522, 766, 1088, 1171, 1305, 1382
BspCNI CTCAG 3 cut(s) 265, 559, 1024
BspFNI CGCG 1 cut(s) 803
BspLI GGNNCC 4 cut(s) 147, 751, 1188, 1332
BspMAI CTGCAG 2 cut(s) 517, 1142
BspMI ACCTGC 1 cut(s) 1354
BspPI GGATC 3 cut(s) 939, 1181, 1194
BspT107I GGYRCC 1 cut(s) 1330
BspTI CTTAAG 1 cut(s) 835
BsrDI GCAATG 1 cut(s) 1257
BsrGI TGTACA 1 cut(s) 915
BssECI CCNNGG 6 cut(s) 36, 123, 260, 997, 998, 1300
BssMI GATC 5 cut(s) 579, 907, 931, 940, 1186
BssT1I CCWWGG 3 cut(s) 36, 123, 1300
Bst2UI CCWGG 3 cut(s) 469, 929, 999
Bst4CI ACNGT 4 cut(s) 327, 1261, 1360, 1479
Bst6I CTCTTC 2 cut(s) 656, 1317
BstAFI CTTAAG 1 cut(s) 835
BstAPI GCANNNNNTGC 2 cut(s) 174, 1360
BstAUI TGTACA 1 cut(s) 915
BstC8I GCNNGC 3 cut(s) 144, 520, 524
BstDEI CTNAG 3 cut(s) 273, 567, 1032
BstDSI CCRYGG 2 cut(s) 36, 123
BstENI CCTNNNNNAGG 1 cut(s) 1438
BstF5I GGATG 5 cut(s) 11, 217, 319, 559, 905
BstFNI CGCG 1 cut(s) 803
BstHHI GCGC 2 cut(s) 621, 1156
BstKTI GATC 5 cut(s) 582, 910, 934, 943, 1189
BstMAI GTCTC 2 cut(s) 282, 1314
BstMBI GATC 5 cut(s) 579, 907, 931, 940, 1186
BstMWI GCNNNNNNNGC 3 cut(s) 174, 1094, 1360
BstNI CCWGG 3 cut(s) 469, 929, 999
BstNSI RCATGY 1 cut(s) 250
BstSCI CCNGG 4 cut(s) 260, 467, 927, 997
BstSFI CTRYAG 3 cut(s) 513, 768, 1138
BstSLI GKGCMC 1 cut(s) 1371
BstUI CGCG 1 cut(s) 803
BstV1I GCAGC 1 cut(s) 527
BstX2I RGATCY 2 cut(s) 931, 1186
BstYI RGATCY 2 cut(s) 931, 1186
BsuRI GGCC 7 cut(s) 146, 522, 766, 1088, 1171, 1305, 1382
BtgI CCRYGG 2 cut(s) 36, 123
BtgZI GCGATG 1 cut(s) 876
BtsCI GGATG 5 cut(s) 11, 217, 319, 559, 905
BtsIMutI CAGTG 3 cut(s) 1029, 1266, 1365
BveI ACCTGC 1 cut(s) 1354
Cac8I GCNNGC 3 cut(s) 144, 520, 524
CaiI CAGNNNCTG 1 cut(s) 1265
CfoI GCGC 2 cut(s) 621, 1156
Cfr13I GGNCC 3 cut(s) 145, 1087, 1244
Csp6I GTAC 2 cut(s) 916, 1331
CviAII CATG 6 cut(s) 37, 124, 178, 247, 550, 877
CviQI GTAC 2 cut(s) 916, 1331
DdeI CTNAG 3 cut(s) 273, 567, 1032
DpnI GATC 5 cut(s) 581, 909, 933, 942, 1188
DpnII GATC 5 cut(s) 579, 907, 931, 940, 1186
DraI TTTAAA 1 cut(s) 492
Eam1104I CTCTTC 2 cut(s) 656, 1317
EarI CTCTTC 2 cut(s) 656, 1317
Eco130I CCWWGG 3 cut(s) 36, 123, 1300
Eco147I AGGCCT 3 cut(s) 522, 766, 1382
Eco47I GGWCC 1 cut(s) 1244
Eco57I CTGAAG 3 cut(s) 252, 680, 765
EcoNI CCTNNNNNAGG 1 cut(s) 1438
EcoO109I RGGNCCY 1 cut(s) 1087
EcoRII CCWGG 3 cut(s) 467, 927, 997
EcoT14I CCWWGG 3 cut(s) 36, 123, 1300
EcoT22I ATGCAT 1 cut(s) 905
ErhI CCWWGG 3 cut(s) 36, 123, 1300
FaeI CATG 6 cut(s) 40, 127, 181, 250, 553, 880
FaqI GGGAC 1 cut(s) 980
FatI CATG 6 cut(s) 36, 123, 177, 246, 549, 876
FbaI TGATCA 2 cut(s) 907, 940
FblI GTMKAC 1 cut(s) 1076
Fnu4HI GCNGC 1 cut(s) 516
FokI GGATG 4 cut(s) 224, 326, 566, 912
Fsp4HI GCNGC 1 cut(s) 516
FspBI CTAG 3 cut(s) 51, 393, 431
GlaI GCGC 2 cut(s) 620, 1155
GluI GCNGC 1 cut(s) 516
GsaI CCCAGC 1 cut(s) 860
HaeIII GGCC 7 cut(s) 146, 522, 766, 1088, 1171, 1305, 1382
HapII CCGG 1 cut(s) 262
HhaI GCGC 2 cut(s) 621, 1156
Hin1II CATG 6 cut(s) 40, 127, 181, 250, 553, 880
Hin6I GCGC 2 cut(s) 619, 1154
HinP1I GCGC 2 cut(s) 619, 1154
HinfI GANTC 8 cut(s) 74, 151, 275, 383, 499, 546, 650, 1415
HpaII CCGG 1 cut(s) 262
HphI GGTGA 2 cut(s) 586, 1424
Hpy166II GTNNAC 5 cut(s) 43, 668, 1077, 1257, 1369
Hpy188I TCNGA 4 cut(s) 79, 606, 745, 1317
Hpy188III TCNNGA 3 cut(s) 935, 1145, 1205
Hpy8I GTNNAC 5 cut(s) 43, 668, 1077, 1257, 1369
HpyAV CCTTC 3 cut(s) 740, 1100, 1444
HpyCH4III ACNGT 4 cut(s) 327, 1261, 1360, 1479
HpyF10VI GCNNNNNNNGC 3 cut(s) 174, 1094, 1360
HpyF3I CTNAG 3 cut(s) 273, 567, 1032
Hsp92II CATG 6 cut(s) 40, 127, 181, 250, 553, 880
HspAI GCGC 2 cut(s) 619, 1154
KpnI GGTACC 1 cut(s) 1334
Ksp22I TGATCA 2 cut(s) 907, 940
Kzo9I GATC 5 cut(s) 579, 907, 931, 940, 1186
Lsp1109I GCAGC 1 cut(s) 527
LweI GCATC 3 cut(s) 638, 890, 1396
MaeI CTAG 3 cut(s) 51, 393, 431
MaeIII GTNAC 6 cut(s) 53, 433, 574, 797, 1261, 1412
MalI GATC 5 cut(s) 581, 909, 933, 942, 1188
MboI GATC 5 cut(s) 579, 907, 931, 940, 1186
MboII GAAGA 6 cut(s) 313, 419, 673, 799, 1304, 1382
MfeI CAATTG 1 cut(s) 1173
MflI RGATCY 2 cut(s) 931, 1186
MhlI GDGCHC 3 cut(s) 341, 1222, 1371
MluCI AATT 9 cut(s) 60, 377, 477, 607, 680, 826, 883, 1173, 1322
MlyI GAGTC 4 cut(s) 83, 284, 555, 1409
MmeI TCCRAC 1 cut(s) 39
Mph1103I ATGCAT 1 cut(s) 905
MroXI GAANNNNTTC 1 cut(s) 754
MslI CAYNNNNRTG 2 cut(s) 1215, 1349
MspA1I CMGCKG 1 cut(s) 856
MspCI CTTAAG 1 cut(s) 835
MspI CCGG 1 cut(s) 262
MspR9I CCNGG 4 cut(s) 262, 469, 929, 999
MunI CAATTG 1 cut(s) 1173
Mva1269I GAATGC 1 cut(s) 565
MvaI CCWGG 3 cut(s) 469, 929, 999
MvnI CGCG 1 cut(s) 803
MwoI GCNNNNNNNGC 3 cut(s) 174, 1094, 1360
NciI CCSGG 1 cut(s) 262
NcoI CCATGG 2 cut(s) 36, 123
NdeII GATC 5 cut(s) 579, 907, 931, 940, 1186
NlaIII CATG 6 cut(s) 40, 127, 181, 250, 553, 880
NlaIV GGNNCC 4 cut(s) 147, 751, 1188, 1332
NmuCI GTSAC 4 cut(s) 433, 574, 1261, 1412
NsiI ATGCAT 1 cut(s) 905
NspI RCATGY 1 cut(s) 250
PaqCI CACCTGC 1 cut(s) 1354
PasI CCCWGGG 1 cut(s) 998
PceI AGGCCT 3 cut(s) 522, 766, 1382
PciI ACATGT 1 cut(s) 246
PctI GAATGC 1 cut(s) 565
PdmI GAANNNNTTC 1 cut(s) 754
PfeI GAWTC 4 cut(s) 151, 383, 499, 650
PfoI TCCNGGA 1 cut(s) 927
PkrI GCNGC 1 cut(s) 517
PleI GAGTC 4 cut(s) 82, 283, 554, 1409
PpsI GAGTC 4 cut(s) 82, 283, 554, 1409
PscI ACATGT 1 cut(s) 246
Psp6I CCWGG 3 cut(s) 467, 927, 997
PspFI CCCAGC 1 cut(s) 856
PspGI CCWGG 3 cut(s) 467, 927, 997
PspN4I GGNNCC 4 cut(s) 147, 751, 1188, 1332
PspPI GGNCC 3 cut(s) 145, 1087, 1244
PstI CTGCAG 2 cut(s) 517, 1142
PstNI CAGNNNCTG 1 cut(s) 1265
PsuI RGATCY 2 cut(s) 931, 1186
RsaI GTAC 2 cut(s) 917, 1332
RsaNI GTAC 2 cut(s) 916, 1331
RseI CAYNNNNRTG 2 cut(s) 1215, 1349
SatI GCNGC 1 cut(s) 516
Sau3AI GATC 5 cut(s) 579, 907, 931, 940, 1186
Sau96I GGNCC 3 cut(s) 145, 1087, 1244
SchI GAGTC 4 cut(s) 83, 284, 555, 1409
ScrFI CCNGG 4 cut(s) 262, 469, 929, 999
SduI GDGCHC 3 cut(s) 341, 1222, 1371
SfaNI GCATC 3 cut(s) 638, 890, 1396
SfcI CTRYAG 3 cut(s) 513, 768, 1138
SinI GGWCC 1 cut(s) 1244
SmiMI CAYNNNNRTG 2 cut(s) 1215, 1349
SmlI CTYRAG 3 cut(s) 835, 1221, 1227
SmoI CTYRAG 3 cut(s) 835, 1221, 1227
Sse9I AATT 9 cut(s) 60, 377, 477, 607, 680, 826, 883, 1173, 1322
SseBI AGGCCT 3 cut(s) 522, 766, 1382
SsiI CCGC 2 cut(s) 803, 854
SspI AATATT 2 cut(s) 162, 850
SspMI CTAG 3 cut(s) 51, 393, 431
StuI AGGCCT 3 cut(s) 522, 766, 1382
StyD4I CCNGG 4 cut(s) 260, 467, 927, 997
StyI CCWWGG 3 cut(s) 36, 123, 1300
TaaI ACNGT 4 cut(s) 327, 1261, 1360, 1479
TaqI TCGA 1 cut(s) 1102
TasI AATT 9 cut(s) 60, 377, 477, 607, 680, 826, 883, 1173, 1322
TatI WGTACW 1 cut(s) 915
TfiI GAWTC 4 cut(s) 151, 383, 499, 650
TscAI CASTG 3 cut(s) 1036, 1266, 1365
TseFI GTSAC 4 cut(s) 433, 574, 1261, 1412
TseI GCWGC 1 cut(s) 515
Tsp45I GTSAC 4 cut(s) 433, 574, 1261, 1412
TspDTI ATGAA 2 cut(s) 79, 194
TspRI CASTG 3 cut(s) 1036, 1266, 1365
Vha464I CTTAAG 1 cut(s) 835
VneI GTGCAC 1 cut(s) 1367
VpaK11BI GGWCC 1 cut(s) 1244
XagI CCTNNNNNAGG 1 cut(s) 1438
XapI RAATTY 3 cut(s) 377, 607, 680
XceI RCATGY 1 cut(s) 250
XmiI GTMKAC 1 cut(s) 1076
XmnI GAANNNNTTC 1 cut(s) 754
XspI CTAG 3 cut(s) 51, 393, 431
Zsp2I ATGCAT 1 cut(s) 905
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.