Rorug05G0192600

Protein of unknown function (DUF674)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
18896849 .. 18917292
20444 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0192600.1

Sequence Viewer

Length: 660 bp
ATGGCGGACGAGGTTATTCTATTGGACGGTTATGTGAGCAGCTTTGGGATGAGGGTCAGAGTAGCTCTGGCCGAGAAGGGAATTAAGTATGAGTACAGAGAAGAAGACCTGAGAAACAAGAGCCAACTGCTTCTTAAGATGAACCCGATCCACAAGAAGATCCCGGTGCTCATCCATAATGGCAAACCGGTCTGTGAATCGCTCATCATTGTGCAGTATATTGATGAGGTATGGAAGGATAAGGCTCCTCTGCTTCCCTCTGATCCCTACCAGAGAGCCCAGGCCAGATTCTGGGCCGATTTCATTGATAAGAAGTTATATGATGCGAGCAGGAAGATATGGACTACAAAAGGAGAAGAGCAGGAGGCAGCAAAGAAGGAATTCATTGAAGTCCTGAAGGTGTTGGAAGGAGAGCTTGGAGACAAGCCTTATTTCATGGGTGAGAGATTTGGGTTCCTGGACATTGCTCTCATCACATTCTACAGCTGGTTTCATGCTTATGAGACACTTGGAAACTTCAGTATAGAGGCCGAGTGCCCCAAGCTGATTTCATGGGCCAAGAGGTGCTTGCAGAAGGAGAGTGTTTCAAAATCTCTTGCTGACCAGAAAAAGGCTTATGAGTATCTTCTTGAGATGAAGAAGAGGCTTGGTGTGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

219

Amino Acids

25.53

Weight (kDa)

7.63

Isoelectric Point (pI)

32.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 5 - 76 2.4e-20 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 11 - 76 5.4e-16 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 13 - 76 1e-13 Glutathione S-transferase, N-terminal domain
GST_C PF00043 116 - 192 2.2e-09 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 121 - 188 6.7e-11 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 291
AciI CCGC 1 cut(s) 5
AclWI GGATC 3 cut(s) 142, 154, 257
AcoI YGGCCR 1 cut(s) 69
AcsI RAATTY 1 cut(s) 380
AcuI CTGAAG 2 cut(s) 416, 502
AfaI GTAC 1 cut(s) 95
AfiI CCNNNNNNNGG 2 cut(s) 291, 610
AflII CTTAAG 1 cut(s) 134
AgeI ACCGGT 1 cut(s) 187
AgsI TTSAA 2 cut(s) 389, 588
AjnI CCWGG 2 cut(s) 279, 456
AjuI GAANNNNNNNTTGG 2 cut(s) 399, 431
AluBI AGCT 5 cut(s) 42, 65, 415, 486, 544
AluI AGCT 5 cut(s) 42, 65, 415, 486, 544
Alw21I GWGCWC 1 cut(s) 171
Alw26I GTCTC 2 cut(s) 414, 497
AlwI GGATC 3 cut(s) 142, 154, 257
AlwNI CAGNNNCTG 1 cut(s) 291
AoxI GGCC 5 cut(s) 69, 282, 294, 528, 555
ApeKI GCWGC 2 cut(s) 39, 368
ApoI RAATTY 1 cut(s) 380
AsiGI ACCGGT 1 cut(s) 187
Asp700I GAANNNNTTC 1 cut(s) 380
AspS9I GGNCC 2 cut(s) 294, 555
AsuC2I CCSGG 1 cut(s) 164
AsuHPI GGTGA 1 cut(s) 452
BaeGI GKGCMC 1 cut(s) 539
BanII GRGCYC 1 cut(s) 280
BbsI GAAGAC 1 cut(s) 111
Bbv12I GWGCWC 1 cut(s) 171
BbvI GCAGC 2 cut(s) 51, 380
BciT130I CCWGG 2 cut(s) 281, 458
BcnI CCSGG 1 cut(s) 164
BcoDI GTCTC 2 cut(s) 414, 497
BfmI CTRYAG 1 cut(s) 481
BfrI CTTAAG 1 cut(s) 134
BisI GCNGC 2 cut(s) 40, 369
BlsI GCNGC 2 cut(s) 41, 370
Bme1390I CCNGG 3 cut(s) 164, 281, 458
BmgT120I GGNCC 2 cut(s) 294, 555
BmiI GGNNCC 2 cut(s) 246, 455
BmrFI CCNGG 3 cut(s) 164, 281, 458
BmsI GCATC 1 cut(s) 313
BpiI GAAGAC 1 cut(s) 111
BpuEI CTTGAG 1 cut(s) 650
BpuMI CCSGG 1 cut(s) 164
BsaJI CCNNGG 1 cut(s) 279
BsaWI WCCGGW 1 cut(s) 187
Bsc4I CCNNNNNNNGG 2 cut(s) 291, 610
Bse118I RCCGGY 1 cut(s) 187
Bse3DI GCAATG 1 cut(s) 462
BseBI CCWGG 2 cut(s) 281, 458
BseDI CCNNGG 1 cut(s) 279
BseGI GGATG 2 cut(s) 54, 171
BseLI CCNNNNNNNGG 2 cut(s) 291, 610
BseMI GCAATG 1 cut(s) 462
BseMII CTCAG 1 cut(s) 101
BseRI GAGGAG 1 cut(s) 237
BseSI GKGCMC 1 cut(s) 539
BseXI GCAGC 2 cut(s) 51, 380
BsgI GTGCAG 1 cut(s) 233
BshFI GGCC 5 cut(s) 71, 284, 296, 530, 557
BshTI ACCGGT 1 cut(s) 187
BsiHKAI GWGCWC 1 cut(s) 171
BsiSI CCGG 2 cut(s) 164, 188
BslI CCNNNNNNNGG 2 cut(s) 291, 610
BsmAI GTCTC 2 cut(s) 414, 497
BsnI GGCC 5 cut(s) 71, 284, 296, 530, 557
Bsp1286I GDGCHC 3 cut(s) 171, 280, 539
Bsp143I GATC 3 cut(s) 147, 159, 262
BspACI CCGC 1 cut(s) 5
BspANI GGCC 5 cut(s) 71, 284, 296, 530, 557
BspCNI CTCAG 1 cut(s) 102
BspLI GGNNCC 2 cut(s) 246, 455
BspPI GGATC 3 cut(s) 142, 154, 257
BspQI GCTCTTC 1 cut(s) 351
BspTI CTTAAG 1 cut(s) 134
BsrDI GCAATG 1 cut(s) 462
BsrFI RCCGGY 1 cut(s) 187
BssAI RCCGGY 1 cut(s) 187
BssECI CCNNGG 1 cut(s) 279
BssMI GATC 3 cut(s) 147, 159, 262
Bst2UI CCWGG 2 cut(s) 281, 458
Bst4CI ACNGT 1 cut(s) 29
Bst6I CTCTTC 2 cut(s) 351, 635
BstAFI CTTAAG 1 cut(s) 134
BstC8I GCNNGC 2 cut(s) 328, 569
BstDEI CTNAG 1 cut(s) 110
BstF5I GGATG 2 cut(s) 54, 171
BstKTI GATC 3 cut(s) 150, 162, 265
BstMAI GTCTC 2 cut(s) 414, 497
BstMBI GATC 3 cut(s) 147, 159, 262
BstNI CCWGG 2 cut(s) 281, 458
BstSCI CCNGG 3 cut(s) 162, 279, 456
BstSFI CTRYAG 1 cut(s) 481
BstSLI GKGCMC 1 cut(s) 539
BstV1I GCAGC 2 cut(s) 51, 380
BstV2I GAAGAC 1 cut(s) 111
BstX2I RGATCY 1 cut(s) 159
BstYI RGATCY 1 cut(s) 159
BsuRI GGCC 5 cut(s) 71, 284, 296, 530, 557
BtsCI GGATG 2 cut(s) 54, 171
Cac8I GCNNGC 2 cut(s) 328, 569
CaiI CAGNNNCTG 1 cut(s) 291
Cfr10I RCCGGY 1 cut(s) 187
Cfr13I GGNCC 2 cut(s) 294, 555
Csp6I GTAC 1 cut(s) 94
CspAI ACCGGT 1 cut(s) 187
CviAII CATG 3 cut(s) 436, 494, 552
CviQI GTAC 1 cut(s) 94
DdeI CTNAG 1 cut(s) 110
DpnI GATC 3 cut(s) 149, 161, 264
DpnII GATC 3 cut(s) 147, 159, 262
EaeI YGGCCR 1 cut(s) 69
Eam1104I CTCTTC 2 cut(s) 351, 635
EarI CTCTTC 2 cut(s) 351, 635
EciI GGCGGA 1 cut(s) 20
Eco24I GRGCYC 1 cut(s) 280
Eco57I CTGAAG 2 cut(s) 416, 502
EcoRI GAATTC 1 cut(s) 380
EcoRII CCWGG 2 cut(s) 279, 456
EcoT38I GRGCYC 1 cut(s) 280
FaeI CATG 3 cut(s) 439, 497, 555
FalI AAGNNNNNCTT 4 cut(s) 399, 431, 551, 583
FatI CATG 3 cut(s) 435, 493, 551
Fnu4HI GCNGC 2 cut(s) 40, 369
FokI GGATG 2 cut(s) 61, 158
FriOI GRGCYC 1 cut(s) 280
Fsp4HI GCNGC 2 cut(s) 40, 369
GluI GCNGC 2 cut(s) 40, 369
HaeIII GGCC 5 cut(s) 71, 284, 296, 530, 557
HapII CCGG 2 cut(s) 164, 188
Hin1II CATG 3 cut(s) 439, 497, 555
HinfI GANTC 2 cut(s) 197, 288
HpaII CCGG 2 cut(s) 164, 188
HphI GGTGA 1 cut(s) 452
Hpy188I TCNGA 2 cut(s) 59, 262
Hpy188III TCNNGA 2 cut(s) 394, 629
HpyAV CCTTC 6 cut(s) 70, 229, 370, 391, 401, 568
HpyCH4III ACNGT 1 cut(s) 29
HpyCH4V TGCA 2 cut(s) 214, 571
HpyF3I CTNAG 1 cut(s) 110
Hsp92II CATG 3 cut(s) 439, 497, 555
Kzo9I GATC 3 cut(s) 147, 159, 262
LguI GCTCTTC 1 cut(s) 351
LmnI GCTCC 1 cut(s) 250
Lsp1109I GCAGC 2 cut(s) 51, 380
LweI GCATC 1 cut(s) 313
MalI GATC 3 cut(s) 149, 161, 264
MboI GATC 3 cut(s) 147, 159, 262
MboII GAAGA 8 cut(s) 113, 116, 169, 346, 368, 617, 649, 652
MflI RGATCY 1 cut(s) 159
MhlI GDGCHC 3 cut(s) 171, 280, 539
MluCI AATT 2 cut(s) 81, 380
MmeI TCCRAC 1 cut(s) 384
MnlI CCTC 9 cut(s) 4, 45, 220, 258, 268, 358, 520, 555, 636
MroXI GAANNNNTTC 1 cut(s) 380
MseI TTAA 2 cut(s) 84, 135
MslI CAYNNNNRTG 2 cut(s) 209, 498
MspA1I CMGCKG 1 cut(s) 486
MspCI CTTAAG 1 cut(s) 134
MspI CCGG 2 cut(s) 164, 188
MspR9I CCNGG 3 cut(s) 164, 281, 458
MvaI CCWGG 2 cut(s) 281, 458
NciI CCSGG 1 cut(s) 164
NdeII GATC 3 cut(s) 147, 159, 262
NlaIII CATG 3 cut(s) 439, 497, 555
NlaIV GGNNCC 2 cut(s) 246, 455
NmeAIII GCCGAG 2 cut(s) 97, 556
PciSI GCTCTTC 1 cut(s) 351
PdmI GAANNNNTTC 1 cut(s) 380
PfeI GAWTC 2 cut(s) 197, 288
PflMI CCANNNNNTGG 1 cut(s) 291
PfoI TCCNGGA 1 cut(s) 456
PinAI ACCGGT 1 cut(s) 187
PkrI GCNGC 2 cut(s) 41, 370
Psp6I CCWGG 2 cut(s) 279, 456
PspGI CCWGG 2 cut(s) 279, 456
PspN4I GGNNCC 2 cut(s) 246, 455
PspPI GGNCC 2 cut(s) 294, 555
PstNI CAGNNNCTG 1 cut(s) 291
PsuI RGATCY 1 cut(s) 159
PvuII CAGCTG 1 cut(s) 486
RsaI GTAC 1 cut(s) 95
RsaNI GTAC 1 cut(s) 94
RseI CAYNNNNRTG 2 cut(s) 209, 498
SapI GCTCTTC 1 cut(s) 351
SaqAI TTAA 2 cut(s) 84, 135
SatI GCNGC 2 cut(s) 40, 369
Sau3AI GATC 3 cut(s) 147, 159, 262
Sau96I GGNCC 2 cut(s) 294, 555
ScrFI CCNGG 3 cut(s) 164, 281, 458
SduI GDGCHC 3 cut(s) 171, 280, 539
SfaNI GCATC 1 cut(s) 313
SfcI CTRYAG 1 cut(s) 481
SmiMI CAYNNNNRTG 2 cut(s) 209, 498
SmlI CTYRAG 2 cut(s) 134, 629
SmoI CTYRAG 2 cut(s) 134, 629
Sse9I AATT 2 cut(s) 81, 380
SsiI CCGC 1 cut(s) 5
StyD4I CCNGG 3 cut(s) 162, 279, 456
TaaI ACNGT 1 cut(s) 29
TasI AATT 2 cut(s) 81, 380
TatI WGTACW 1 cut(s) 93
TfiI GAWTC 2 cut(s) 197, 288
Tru1I TTAA 2 cut(s) 84, 135
Tru9I TTAA 2 cut(s) 84, 135
TseI GCWGC 2 cut(s) 39, 368
TspDTI ATGAA 7 cut(s) 155, 292, 373, 424, 482, 540, 650
Van91I CCANNNNNTGG 1 cut(s) 291
Vha464I CTTAAG 1 cut(s) 134
XapI RAATTY 1 cut(s) 380
XmnI GAANNNNTTC 1 cut(s) 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.