RchiOBHm_Chr6g0278351

BEST Arabidopsis thaliana protein match is Protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000148
Physical Location & Seq
Reverse (-)
41429140 .. 41431001
1862 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24968

Sequence Viewer

Length: 1455 bp
ATGGCTAATAAATCCATGAATAGTATTAGCTTCAAGGCACTGGTGGACAAGCGGAGCAACAAAGTTATCTTCATAGAAACTGATAATGATTTTGTTGATGTTCTCTTCAGTTTCTTGACAATACCAATGGGAACAATCATCAGAGTTGCCCGTAAACATTCATTACCAGTGGAAACAGGTTGCATGAACAATTTGTATGCAAGTGTTGAAAATATTGATGCACGTATTTTCCAGACTGGAGCATGTAAAGACATGTTGCTGTGTCCTCGTAGTGGGGCTGAACTTCATTGCAAGAATCTCCAATTGAAGATTAACAATGATGAGCCCACACAGTATTTTTCGTGCTCTAAGGATTGCACCTGCGGTTATAAATTATTTAGTCATTACAAAGATGTTCTTTTGGGAAAGTTGAAGAAATCCTCTTCTGCAGATGGTGGAGTGTTCTGTAAAGGACTTACCAGATTTATAATTACTGATGATCTAGAAGTGATGCCACCATCAAGTTCGGCGATCTGTTCTTTATTTACTAAGCTTAAAGTCATGGATGCTAGTACTACTGAGGAGCTGGCTTTCAATGTAGGATTTGGTGAGGTTTTGGAAATGCTTGTATGCTCATTAGTATCAAAGACGCCTTTGTCAGAAACTCTTCTGAAGCTTAAATCACAACCAAACTTGAGCAATGAATATCCAAATCAAGGAATATGTATTGAACCTCAAACAGTAGGAGGCTGTATGAATGAGGAAGACACCATTTCTGTGAAGCTTATTGTTTGCAAATCTCAGAAGATTGTTTGTTATGCAGAAGCAGGGGAGGATTTTGTCAATTTAGTTTTCAGTTTCCTGACCGTTCCACTTGGGTTTATAATAAAACAGATCCAGGATAGGTCGTCCTCTTTGAAAGGAAGCATTGAGCAGCTGTACAAGAGTGTCCAGGATCTTGATGATGAATTCTTCAAATCAAATTACCAGAAGGAAATTTTACTCAATCCGAAGCTTTACCCTGGTTTTTGCTATGAGAACCGTCTTTTAGGAATTGAGTATGGCCTGGAGACCTCGAATTATTATGCACGCTACTGGACAGGTGATTCCTTTAGTAAAGTGGTGACTACTGATAAAGACTTTGTTCCTTCCTATTCTTCTTACAGGCCATCAGTGACTACTGTCCCACTTAAACTCAAGTATTGCGAGACTTTGAATGACCCCGTACGTGATCAAGGATTTTTGAATGGACCGACAATGTTTACAATTACTGACAATCTGATCATAAGGCCCATATCTCCTCTATTTGGCCTCTCTGTTTTAAACAAAATGAAGGTACCATTCACTGATATTGAGGAGCAAATTGTGCAGGTTGGAAAGGAGGAGGCTTTTCGCCTTCTGGTAACATCTTTTCTTAGTGACTCTTCTCTCACCAGCGTCTTCCTTAGGCAGCCAAAGAGCAAATTCGAACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

484

Amino Acids

54.31

Weight (kDa)

5.71

Isoelectric Point (pI)

38.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 8 - 454 4.1e-117 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 369, 467, 863
AarI CACCTGC 1 cut(s) 368
AasI GACNNNNNNGTC 1 cut(s) 634
Acc36I ACCTGC 2 cut(s) 368, 1339
Acc65I GGTACC 1 cut(s) 1315
AccB1I GGYRCC 1 cut(s) 1315
AciI CCGC 2 cut(s) 52, 363
AclWI GGATC 2 cut(s) 868, 942
AcsI RAATTY 3 cut(s) 947, 975, 1442
AcuI CTGAAG 2 cut(s) 91, 671
AcyI GRCGYC 1 cut(s) 629
AfaI GTAC 4 cut(s) 553, 920, 1206, 1317
AfiI CCNNNNNNNGG 3 cut(s) 272, 695, 1286
AflIII ACRYGT 1 cut(s) 252
AjnI CCWGG 4 cut(s) 876, 930, 1000, 1044
AluBI AGCT 7 cut(s) 30, 532, 565, 655, 763, 916, 994
AluI AGCT 7 cut(s) 30, 532, 565, 655, 763, 916, 994
Alw21I GWGCWC 1 cut(s) 347
Alw26I GTCTC 2 cut(s) 1043, 1181
AlwI GGATC 2 cut(s) 868, 942
AoxI GGCC 4 cut(s) 1042, 1145, 1268, 1288
ApeKI GCWGC 2 cut(s) 913, 1429
ApoI RAATTY 3 cut(s) 947, 975, 1442
Asp700I GAANNNNTTC 1 cut(s) 645
Asp718I GGTACC 1 cut(s) 1315
AspS9I GGNCC 2 cut(s) 1229, 1269
AsuHPI GGTGA 4 cut(s) 599, 1094, 1114, 1402
AsuII TTCGAA 1 cut(s) 1446
AvaII GGWCC 1 cut(s) 1229
AxyI CCTNAGG 1 cut(s) 1424
BanI GGYRCC 1 cut(s) 1315
BanII GRGCYC 1 cut(s) 327
BbsI GAAGAC 2 cut(s) 750, 1411
Bbv12I GWGCWC 1 cut(s) 347
BbvI GCAGC 2 cut(s) 925, 1441
BccI CCATC 3 cut(s) 425, 505, 1156
BciT130I CCWGG 4 cut(s) 878, 932, 1002, 1046
BclI TGATCA 2 cut(s) 1210, 1260
BcoDI GTCTC 2 cut(s) 1043, 1181
BfaI CTAG 2 cut(s) 482, 549
BfmI CTRYAG 1 cut(s) 426
BfuAI ACCTGC 2 cut(s) 368, 1339
BisI GCNGC 2 cut(s) 914, 1430
BlsI GCNGC 2 cut(s) 915, 1431
BmcAI AGTACT 1 cut(s) 553
Bme1390I CCNGG 4 cut(s) 878, 932, 1002, 1046
Bme18I GGWCC 1 cut(s) 1229
BmgT120I GGNCC 2 cut(s) 1229, 1269
BmiI GGNNCC 1 cut(s) 1317
BmrFI CCNGG 4 cut(s) 878, 932, 1002, 1046
BmsI GCATC 3 cut(s) 208, 480, 535
BoxI GACNNNNGTC 1 cut(s) 1160
BpiI GAAGAC 2 cut(s) 750, 1411
BpmI CTGGAG 2 cut(s) 258, 1067
Bpu14I TTCGAA 1 cut(s) 1446
BpuEI CTTGAG 2 cut(s) 694, 1160
BsaAI YACGTR 2 cut(s) 224, 1208
BsaHI GRCGYC 1 cut(s) 629
BsaI GGTCTC 1 cut(s) 1043
BsaJI CCNNGG 1 cut(s) 1000
Bsc4I CCNNNNNNNGG 3 cut(s) 272, 695, 1286
Bse1I ACTGG 4 cut(s) 45, 167, 241, 1079
Bse21I CCTNAGG 1 cut(s) 1424
Bse3DI GCAATG 2 cut(s) 286, 685
BseBI CCWGG 4 cut(s) 878, 932, 1002, 1046
BseDI CCNNGG 1 cut(s) 1000
BseGI GGATG 1 cut(s) 550
BseLI CCNNNNNNNGG 3 cut(s) 272, 695, 1286
BseMI GCAATG 2 cut(s) 286, 685
BseMII CTCAG 2 cut(s) 549, 794
BseNI ACTGG 4 cut(s) 45, 167, 241, 1079
BseRI GAGGAG 4 cut(s) 575, 1269, 1349, 1376
BseXI GCAGC 2 cut(s) 925, 1441
BsgI GTGCAG 1 cut(s) 1367
BshFI GGCC 4 cut(s) 1044, 1147, 1270, 1290
BshNI GGYRCC 1 cut(s) 1315
BsiHKAI GWGCWC 1 cut(s) 347
BsiWI CGTACG 1 cut(s) 1204
BslFI GGGAC 1 cut(s) 1148
BslI CCNNNNNNNGG 3 cut(s) 272, 695, 1286
BsmAI GTCTC 2 cut(s) 1043, 1181
BsmFI GGGAC 1 cut(s) 1148
BsnI GGCC 4 cut(s) 1044, 1147, 1270, 1290
Bso31I GGTCTC 1 cut(s) 1043
Bsp119I TTCGAA 1 cut(s) 1446
Bsp1286I GDGCHC 2 cut(s) 327, 347
Bsp1407I TGTACA 1 cut(s) 918
Bsp143I GATC 6 cut(s) 478, 510, 873, 934, 1210, 1260
BspACI CCGC 2 cut(s) 52, 363
BspANI GGCC 4 cut(s) 1044, 1147, 1270, 1290
BspCNI CTCAG 2 cut(s) 550, 793
BspLI GGNNCC 1 cut(s) 1317
BspMAI CTGCAG 1 cut(s) 430
BspMI ACCTGC 2 cut(s) 368, 1339
BspPI GGATC 2 cut(s) 868, 942
BspT104I TTCGAA 1 cut(s) 1446
BspT107I GGYRCC 1 cut(s) 1315
BspTNI GGTCTC 1 cut(s) 1043
BsrDI GCAATG 2 cut(s) 286, 685
BsrGI TGTACA 1 cut(s) 918
BsrI ACTGG 4 cut(s) 45, 167, 241, 1079
BssECI CCNNGG 1 cut(s) 1000
BssMI GATC 6 cut(s) 478, 510, 873, 934, 1210, 1260
BssNI GRCGYC 1 cut(s) 629
Bst2UI CCWGG 4 cut(s) 878, 932, 1002, 1046
Bst4CI ACNGT 5 cut(s) 333, 721, 847, 1022, 1162
Bst6I CTCTTC 4 cut(s) 110, 427, 651, 1408
BstACI GRCGYC 1 cut(s) 629
BstAPI GCANNNNNTGC 1 cut(s) 1345
BstAUI TGTACA 1 cut(s) 918
BstBAI YACGTR 2 cut(s) 224, 1208
BstBI TTCGAA 1 cut(s) 1446
BstC8I GCNNGC 2 cut(s) 567, 1069
BstDEI CTNAG 6 cut(s) 348, 528, 558, 780, 1394, 1424
BstF5I GGATG 1 cut(s) 550
BstKTI GATC 6 cut(s) 481, 513, 876, 937, 1213, 1263
BstMAI GTCTC 2 cut(s) 1043, 1181
BstMBI GATC 6 cut(s) 478, 510, 873, 934, 1210, 1260
BstMWI GCNNNNNNNGC 1 cut(s) 1345
BstNI CCWGG 4 cut(s) 878, 932, 1002, 1046
BstNSI RCATGY 2 cut(s) 246, 256
BstPAI GACNNNNGTC 1 cut(s) 1160
BstSCI CCNGG 4 cut(s) 876, 930, 1000, 1044
BstSFI CTRYAG 1 cut(s) 426
BstV1I GCAGC 2 cut(s) 925, 1441
BstV2I GAAGAC 2 cut(s) 750, 1411
BstX2I RGATCY 2 cut(s) 873, 934
BstYI RGATCY 2 cut(s) 873, 934
Bsu36I CCTNAGG 1 cut(s) 1424
BsuRI GGCC 4 cut(s) 1044, 1147, 1270, 1290
BtsCI GGATG 1 cut(s) 550
BtsIMutI CAGTG 4 cut(s) 38, 174, 1158, 1323
BveI ACCTGC 2 cut(s) 368, 1339
Cac8I GCNNGC 2 cut(s) 567, 1069
Cfr13I GGNCC 2 cut(s) 1229, 1269
CseI GACGC 2 cut(s) 637, 1405
Csp6I GTAC 4 cut(s) 552, 919, 1205, 1316
CviAII CATG 5 cut(s) 16, 184, 243, 253, 541
CviQI GTAC 4 cut(s) 552, 919, 1205, 1316
DdeI CTNAG 6 cut(s) 348, 528, 558, 780, 1394, 1424
DpnI GATC 6 cut(s) 480, 512, 875, 936, 1212, 1262
DpnII GATC 6 cut(s) 478, 510, 873, 934, 1210, 1260
DraI TTTAAA 1 cut(s) 1302
DrdI GACNNNNNNGTC 1 cut(s) 634
DseDI GACNNNNNNGTC 1 cut(s) 634
Eam1104I CTCTTC 4 cut(s) 110, 427, 651, 1408
EarI CTCTTC 4 cut(s) 110, 427, 651, 1408
Eco24I GRGCYC 1 cut(s) 327
Eco31I GGTCTC 1 cut(s) 1043
Eco47I GGWCC 1 cut(s) 1229
Eco57I CTGAAG 2 cut(s) 91, 671
Eco81I CCTNAGG 1 cut(s) 1424
EcoRI GAATTC 1 cut(s) 947
EcoRII CCWGG 4 cut(s) 876, 930, 1000, 1044
EcoT38I GRGCYC 1 cut(s) 327
FaeI CATG 5 cut(s) 19, 187, 246, 256, 544
FalI AAGNNNNNCTT 2 cut(s) 381, 413
FaqI GGGAC 1 cut(s) 1148
FatI CATG 5 cut(s) 15, 183, 242, 252, 540
FbaI TGATCA 2 cut(s) 1210, 1260
Fnu4HI GCNGC 2 cut(s) 914, 1430
FokI GGATG 1 cut(s) 557
FriOI GRGCYC 1 cut(s) 327
Fsp4HI GCNGC 2 cut(s) 914, 1430
FspBI CTAG 2 cut(s) 482, 549
GluI GCNGC 2 cut(s) 914, 1430
GsuI CTGGAG 2 cut(s) 258, 1067
HaeIII GGCC 4 cut(s) 1044, 1147, 1270, 1290
HgaI GACGC 2 cut(s) 637, 1405
Hin1I GRCGYC 1 cut(s) 629
Hin1II CATG 5 cut(s) 19, 187, 246, 256, 544
HindIII AAGCTT 4 cut(s) 530, 653, 761, 992
HinfI GANTC 3 cut(s) 295, 1085, 1400
HphI GGTGA 4 cut(s) 599, 1094, 1114, 1402
Hpy166II GTNNAC 3 cut(s) 46, 155, 1242
Hpy188I TCNGA 6 cut(s) 143, 640, 651, 783, 990, 1260
Hpy188III TCNNGA 5 cut(s) 115, 232, 482, 841, 938
Hpy8I GTNNAC 3 cut(s) 46, 155, 1242
HpyAV CCTTC 4 cut(s) 964, 1137, 1306, 1385
HpyCH4III ACNGT 5 cut(s) 333, 721, 847, 1022, 1162
HpyCH4IV ACGT 2 cut(s) 223, 1207
HpyF10VI GCNNNNNNNGC 1 cut(s) 1345
HpyF3I CTNAG 6 cut(s) 348, 528, 558, 780, 1394, 1424
HpySE526I ACGT 2 cut(s) 223, 1207
Hsp92I GRCGYC 1 cut(s) 629
Hsp92II CATG 5 cut(s) 19, 187, 246, 256, 544
KpnI GGTACC 1 cut(s) 1319
Ksp22I TGATCA 2 cut(s) 1210, 1260
Kzo9I GATC 6 cut(s) 478, 510, 873, 934, 1210, 1260
LmnI GCTCC 4 cut(s) 54, 239, 562, 1336
Lsp1109I GCAGC 2 cut(s) 925, 1441
LweI GCATC 3 cut(s) 208, 480, 535
MaeI CTAG 2 cut(s) 482, 549
MaeII ACGT 2 cut(s) 223, 1207
MaeIII GTNAC 4 cut(s) 1102, 1153, 1381, 1397
MalI GATC 6 cut(s) 480, 512, 875, 936, 1212, 1262
MboI GATC 6 cut(s) 478, 510, 873, 934, 1210, 1260
MfeI CAATTG 1 cut(s) 302
MflI RGATCY 2 cut(s) 873, 934
MhlI GDGCHC 2 cut(s) 327, 347
MlyI GAGTC 1 cut(s) 1394
MmeI TCCRAC 1 cut(s) 1333
MroXI GAANNNNTTC 1 cut(s) 645
MseI TTAA 5 cut(s) 312, 534, 657, 1170, 1301
MslI CAYNNNNRTG 1 cut(s) 755
MspA1I CMGCKG 1 cut(s) 916
MspR9I CCNGG 4 cut(s) 878, 932, 1002, 1046
MunI CAATTG 1 cut(s) 302
MvaI CCWGG 4 cut(s) 878, 932, 1002, 1046
MwoI GCNNNNNNNGC 1 cut(s) 1345
NdeII GATC 6 cut(s) 478, 510, 873, 934, 1210, 1260
NlaIII CATG 5 cut(s) 19, 187, 246, 256, 544
NlaIV GGNNCC 1 cut(s) 1317
NmuCI GTSAC 3 cut(s) 1102, 1153, 1397
NspI RCATGY 2 cut(s) 246, 256
NspV TTCGAA 1 cut(s) 1446
PaqCI CACCTGC 1 cut(s) 368
PciI ACATGT 1 cut(s) 252
PdmI GAANNNNTTC 1 cut(s) 645
PfeI GAWTC 2 cut(s) 295, 1085
Pfl23II CGTACG 1 cut(s) 1204
PfoI TCCNGGA 2 cut(s) 876, 930
PkrI GCNGC 2 cut(s) 915, 1431
PleI GAGTC 1 cut(s) 1394
PpsI GAGTC 1 cut(s) 1394
Ppu21I YACGTR 2 cut(s) 224, 1208
PscI ACATGT 1 cut(s) 252
PshAI GACNNNNGTC 1 cut(s) 1160
PsiI TTATAA 3 cut(s) 369, 467, 863
Psp6I CCWGG 4 cut(s) 876, 930, 1000, 1044
PspGI CCWGG 4 cut(s) 876, 930, 1000, 1044
PspLI CGTACG 1 cut(s) 1204
PspN4I GGNNCC 1 cut(s) 1317
PspPI GGNCC 2 cut(s) 1229, 1269
PstI CTGCAG 1 cut(s) 430
PsuI RGATCY 2 cut(s) 873, 934
PvuII CAGCTG 1 cut(s) 916
RsaI GTAC 4 cut(s) 553, 920, 1206, 1317
RsaNI GTAC 4 cut(s) 552, 919, 1205, 1316
RseI CAYNNNNRTG 1 cut(s) 755
SaqAI TTAA 5 cut(s) 312, 534, 657, 1170, 1301
SatI GCNGC 2 cut(s) 914, 1430
Sau3AI GATC 6 cut(s) 478, 510, 873, 934, 1210, 1260
Sau96I GGNCC 2 cut(s) 1229, 1269
ScaI AGTACT 1 cut(s) 553
SchI GAGTC 1 cut(s) 1394
ScrFI CCNGG 4 cut(s) 878, 932, 1002, 1046
SduI GDGCHC 2 cut(s) 327, 347
SfaNI GCATC 3 cut(s) 208, 480, 535
SfcI CTRYAG 1 cut(s) 426
SfuI TTCGAA 1 cut(s) 1446
SinI GGWCC 1 cut(s) 1229
SmiMI CAYNNNNRTG 1 cut(s) 755
SmlI CTYRAG 2 cut(s) 673, 1175
SmoI CTYRAG 2 cut(s) 673, 1175
SsiI CCGC 2 cut(s) 52, 363
SspI AATATT 1 cut(s) 214
SspMI CTAG 2 cut(s) 482, 549
StyD4I CCNGG 4 cut(s) 876, 930, 1000, 1044
TaaI ACNGT 5 cut(s) 333, 721, 847, 1022, 1162
TaiI ACGT 2 cut(s) 226, 1210
TaqI TCGA 2 cut(s) 1055, 1446
TaqII GACCGA 1 cut(s) 1246
TatI WGTACW 2 cut(s) 551, 918
TfiI GAWTC 2 cut(s) 295, 1085
Tru1I TTAA 5 cut(s) 312, 534, 657, 1170, 1301
Tru9I TTAA 5 cut(s) 312, 534, 657, 1170, 1301
TscAI CASTG 4 cut(s) 45, 174, 1158, 1330
TseFI GTSAC 3 cut(s) 1102, 1153, 1397
TseI GCWGC 2 cut(s) 913, 1429
Tsp45I GTSAC 3 cut(s) 1102, 1153, 1397
TspDTI ATGAA 9 cut(s) 32, 61, 150, 200, 275, 696, 749, 960, 1325
TspRI CASTG 4 cut(s) 45, 174, 1158, 1330
VpaK11BI GGWCC 1 cut(s) 1229
XapI RAATTY 3 cut(s) 947, 975, 1442
XbaI TCTAGA 1 cut(s) 481
XceI RCATGY 2 cut(s) 246, 256
XmnI GAANNNNTTC 1 cut(s) 645
XspI CTAG 2 cut(s) 482, 549
ZrmI AGTACT 1 cut(s) 553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.