Rh5BG461700

BEST Arabidopsis thaliana protein match is Protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000148
Physical Location & Seq
Forward (+)
73804905 .. 73809093
4189 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG461700.1

Sequence Viewer

Length: 1656 bp
ATGGCCAATACATCTATCAACAGCATTAGCTTGAAAGCCATGGTGGACAAAGAGAGCAACCAAATTATCTTCGTAGAGTCTGACAATGATTTCATTGATGTTATCTTTAGTTTCTTAACAATACCCATGGGAAAAATTATCAGGTTGACCCCTAATCAATCAATACGATTGGGCGTAGGTTGCTTGAATAATGTGTATGCAAGTGTTAAGAATATGGATCTGAAGCATTTCCGTACTGAAGCATGTAAAGACATGTTGCTATCTCCCCGGAGTGCGGCTGAATCTCAATGCAAGAACCTCAAAGTGAAGATTTACAATGATGAGGCTACACAGTACTTTATGTGCTCACATAACAGAGCCAATTGCAAGTTTAGTTATTGCAAAGATTTAAATTGTGATAGTTGTGGAGGAAAAATAAATATGGAGAAAAATCTTCTAGTGACTCCAGATGGAGGTGTGTTTGTGAAAGGACCATCCAGACTCATAATTACTGATGATTTACAAGTGATTCCACCATTAACTGCAGCAAGCCTTCCTCTACTTACAAAGCTTGGAGTCATGGATGTGAATACTATCAAGGAGGTGACCATCAATGTAGGAGTTGATGAGGTTTTGAATTTGCTTATGCGGTCATTAGCATCGAAGACACCTTTGACAGAATCTCTGCTGAAGATTAAACCAAGACGAAAATTTTGCAATGAATATCAAGGAATAAATACCGAACCCCAAATGGTAAAAGACAAAACGAATCTGGAAGGAACCATTTCTGTCAAGCTTATAGTGAGCAAATCAAAGAAGATGGTTTGTTACGCAGAAGCAGGGGAGGATTTTGTTAATTTGCTCTTAAGTTTCTTAACTATTCCGCTGGGGTTTATTGTTAAACACATGGGGAATTGCTCATTACAAGGATGCATTGATCAGTTGTACAAGAGTGTCCAGGATCTTGATGATCAATATATGATGTCAAGCTACCACAAAGAAATGCTACTCACTCCTAAACTTGTCCCTGGTTTTTGCTATGAGAACCATCTTTTAGGAACTGAGGAAGCCACATATTATTATGCTGGTTCAACAGGTTTTCTGTCTACTGATAGAGTCCTTCTTGCTACTCAAACTGCACTTGCTCCTAAATCTATCAGTCCATTCACTCCCATTGGATTCGGCTGTCAAGAAAGTGCTCAAACTTCAATAAGGCCAATTGCTTTTAGGGATCCCAAAGCCAACCATCACCAACATAAAAATGCTCAAGTTCAAGGGTTTTTAGAAGGACCGGCAATTCCATTCGCTCCCATTGGATTCGGCTGTCAAGAAAGTGCTCAAACTTCAAGGCCAATTGCTTTTAGGGATCCCAAAGCCAACCATTACCAACATAAAAATGCTCAAGTTCAAGGGTTTTTAGAAGGACCGGCAATGTTCACAGTGACTGATGATCTGAACATAAGACCTGTATCTCTAATCTATGGCCTGTCTCTTCTAAATGAATTGAAGGTACCTTTGACTGACATTTATGTGCAAACCGTGCAGGTGCACGAACAGGAGGCTTTGCGTCTTTTGGTAGCTGCCATCTGGGTCATTTTTGTTGTAGTATATATGAATCATGTTGTATATATGAGTCGTAGTATAAATGTCTATATCATGTATACAATAGGTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

551

Amino Acids

61.4

Weight (kDa)

7.83

Isoelectric Point (pI)

32.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 8 - 511 5.7e-127 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1513
Acc36I ACCTGC 1 cut(s) 1513
Acc65I GGTACC 1 cut(s) 1489
AccB1I GGYRCC 1 cut(s) 1489
AccI GTMKAC 2 cut(s) 1085, 1640
AciI CCGC 3 cut(s) 275, 628, 863
AclWI GGATC 6 cut(s) 225, 948, 1205, 1218, 1340, 1353
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 616, 689
AcuI CTGAAG 3 cut(s) 242, 258, 689
AfaI GTAC 5 cut(s) 235, 335, 926, 1491, 1651
AfiI CCNNNNNNNGG 2 cut(s) 274, 452
AflII CTTAAG 1 cut(s) 844
AflIII ACRYGT 1 cut(s) 252
AgsI TTSAA 9 cut(s) 34, 187, 616, 1071, 1188, 1253, 1326, 1388, 1486
AjnI CCWGG 2 cut(s) 936, 1006
AluBI AGCT 5 cut(s) 30, 550, 775, 969, 1559
AluI AGCT 5 cut(s) 30, 550, 775, 969, 1559
Alw21I GWGCWC 4 cut(s) 347, 1180, 1318, 1530
Alw26I GTCTC 1 cut(s) 1473
Alw44I GTGCAC 1 cut(s) 1526
AlwI GGATC 6 cut(s) 225, 948, 1205, 1218, 1340, 1353
AlwNI CAGNNNCTG 1 cut(s) 1424
AoxI GGCC 4 cut(s) 3, 1193, 1328, 1462
ApaLI GTGCAC 1 cut(s) 1526
ApeKI GCWGC 2 cut(s) 524, 1559
ApoI RAATTY 2 cut(s) 616, 689
ArsI GACNNNNNNTTYG 2 cut(s) 675, 707
Asp700I GAANNNNTTC 2 cut(s) 227, 763
Asp718I GGTACC 1 cut(s) 1489
AspS9I GGNCC 3 cut(s) 470, 1268, 1403
AsuC2I CCSGG 1 cut(s) 268
AsuHPI GGTGA 2 cut(s) 595, 1220
AvaII GGWCC 3 cut(s) 470, 1268, 1403
BaeGI GKGCMC 1 cut(s) 1530
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 2 cut(s) 1210, 1345
BanI GGYRCC 1 cut(s) 1489
BbsI GAAGAC 1 cut(s) 650
Bbv12I GWGCWC 4 cut(s) 347, 1180, 1318, 1530
BbvI GCAGC 2 cut(s) 536, 1546
BccI CCATC 7 cut(s) 443, 481, 596, 793, 1035, 1233, 1571
BcgI CGANNNNNNTGC 2 cut(s) 675, 709
BciT130I CCWGG 2 cut(s) 938, 1008
BclI TGATCA 2 cut(s) 916, 949
BcnI CCSGG 1 cut(s) 268
BcoDI GTCTC 1 cut(s) 1473
BfaI CTAG 1 cut(s) 437
BfmI CTRYAG 1 cut(s) 522
BfrI CTTAAG 1 cut(s) 844
BfuAI ACCTGC 1 cut(s) 1513
BisI GCNGC 3 cut(s) 276, 525, 1560
BlsI GCNGC 3 cut(s) 277, 526, 1561
BmcAI AGTACT 1 cut(s) 335
Bme1390I CCNGG 3 cut(s) 268, 938, 1008
Bme18I GGWCC 3 cut(s) 470, 1268, 1403
BmgT120I GGNCC 3 cut(s) 470, 1268, 1403
BmiI GGNNCC 4 cut(s) 760, 1212, 1347, 1491
BmrFI CCNGG 3 cut(s) 268, 938, 1008
BmsI GCATC 2 cut(s) 647, 899
BpiI GAAGAC 1 cut(s) 650
BpmI CTGGAG 1 cut(s) 429
BpuEI CTTGAG 2 cut(s) 1230, 1365
BpuMI CCSGG 1 cut(s) 268
BsaJI CCNNGG 4 cut(s) 39, 126, 266, 1006
Bsc4I CCNNNNNNNGG 2 cut(s) 274, 452
Bse118I RCCGGY 2 cut(s) 1270, 1405
Bse3DI GCAATG 2 cut(s) 703, 1416
BseBI CCWGG 2 cut(s) 938, 1008
BseDI CCNNGG 4 cut(s) 39, 126, 266, 1006
BseGI GGATG 3 cut(s) 473, 568, 914
BseLI CCNNNNNNNGG 2 cut(s) 274, 452
BseMI GCAATG 2 cut(s) 703, 1416
BseMII CTCAG 1 cut(s) 1032
BseSI GKGCMC 1 cut(s) 1530
BseXI GCAGC 2 cut(s) 536, 1546
BseYI CCCAGC 1 cut(s) 865
BsgI GTGCAG 2 cut(s) 1101, 1541
BshFI GGCC 4 cut(s) 5, 1195, 1330, 1464
BshNI GGYRCC 1 cut(s) 1489
BsiHKAI GWGCWC 4 cut(s) 347, 1180, 1318, 1530
BsiSI CCGG 3 cut(s) 268, 1271, 1406
BslFI GGGAC 1 cut(s) 989
BslI CCNNNNNNNGG 2 cut(s) 274, 452
BsmAI GTCTC 1 cut(s) 1473
BsmFI GGGAC 1 cut(s) 989
BsnI GGCC 4 cut(s) 5, 1195, 1330, 1464
Bsp1286I GDGCHC 4 cut(s) 347, 1180, 1318, 1530
Bsp1407I TGTACA 1 cut(s) 924
Bsp143I GATC 7 cut(s) 217, 916, 940, 949, 1210, 1345, 1429
Bsp19I CCATGG 2 cut(s) 39, 126
BspACI CCGC 3 cut(s) 275, 628, 863
BspANI GGCC 4 cut(s) 5, 1195, 1330, 1464
BspCNI CTCAG 1 cut(s) 1033
BspLI GGNNCC 4 cut(s) 760, 1212, 1347, 1491
BspMAI CTGCAG 1 cut(s) 526
BspMI ACCTGC 1 cut(s) 1513
BspPI GGATC 6 cut(s) 225, 948, 1205, 1218, 1340, 1353
BspT107I GGYRCC 1 cut(s) 1489
BspTI CTTAAG 1 cut(s) 844
BsrDI GCAATG 2 cut(s) 703, 1416
BsrFI RCCGGY 2 cut(s) 1270, 1405
BsrGI TGTACA 1 cut(s) 924
BssAI RCCGGY 2 cut(s) 1270, 1405
BssECI CCNNGG 4 cut(s) 39, 126, 266, 1006
BssMI GATC 7 cut(s) 217, 916, 940, 949, 1210, 1345, 1429
BssNAI GTATAC 1 cut(s) 1641
BssT1I CCWWGG 2 cut(s) 39, 126
Bst1107I GTATAC 1 cut(s) 1641
Bst2UI CCWGG 2 cut(s) 938, 1008
Bst4CI ACNGT 3 cut(s) 333, 1420, 1519
Bst6I CTCTTC 1 cut(s) 1476
BstAFI CTTAAG 1 cut(s) 844
BstAPI GCANNNNNTGC 1 cut(s) 1519
BstAUI TGTACA 1 cut(s) 924
BstC8I GCNNGC 1 cut(s) 529
BstDEI CTNAG 1 cut(s) 1041
BstDSI CCRYGG 2 cut(s) 39, 126
BstEII GGTNACC 1 cut(s) 583
BstF5I GGATG 3 cut(s) 473, 568, 914
BstKTI GATC 7 cut(s) 220, 919, 943, 952, 1213, 1348, 1432
BstMAI GTCTC 1 cut(s) 1473
BstMBI GATC 7 cut(s) 217, 916, 940, 949, 1210, 1345, 1429
BstMWI GCNNNNNNNGC 2 cut(s) 180, 1519
BstNI CCWGG 2 cut(s) 938, 1008
BstNSI RCATGY 2 cut(s) 246, 256
BstPI GGTNACC 1 cut(s) 583
BstSCI CCNGG 3 cut(s) 266, 936, 1006
BstSFI CTRYAG 1 cut(s) 522
BstSLI GKGCMC 1 cut(s) 1530
BstV1I GCAGC 2 cut(s) 536, 1546
BstV2I GAAGAC 1 cut(s) 650
BstX2I RGATCY 4 cut(s) 217, 940, 1210, 1345
BstYI RGATCY 4 cut(s) 217, 940, 1210, 1345
BstZ17I GTATAC 1 cut(s) 1641
BsuRI GGCC 4 cut(s) 5, 1195, 1330, 1464
BtgI CCRYGG 2 cut(s) 39, 126
BtsCI GGATG 3 cut(s) 473, 568, 914
BtsIMutI CAGTG 1 cut(s) 1425
BveI ACCTGC 1 cut(s) 1513
Cac8I GCNNGC 1 cut(s) 529
CaiI CAGNNNCTG 1 cut(s) 1424
Cfr10I RCCGGY 2 cut(s) 1270, 1405
Cfr13I GGNCC 3 cut(s) 470, 1268, 1403
CseI GACGC 1 cut(s) 1535
Csp6I GTAC 5 cut(s) 234, 334, 925, 1490, 1650
CviAII CATG 8 cut(s) 40, 127, 243, 253, 559, 886, 1598, 1636
CviQI GTAC 5 cut(s) 234, 334, 925, 1490, 1650
DdeI CTNAG 1 cut(s) 1041
DpnI GATC 7 cut(s) 219, 918, 942, 951, 1212, 1347, 1431
DpnII GATC 7 cut(s) 217, 916, 940, 949, 1210, 1345, 1429
DraI TTTAAA 1 cut(s) 390
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 1476
EarI CTCTTC 1 cut(s) 1476
Eco130I CCWWGG 2 cut(s) 39, 126
Eco47I GGWCC 3 cut(s) 470, 1268, 1403
Eco57I CTGAAG 3 cut(s) 242, 258, 689
Eco91I GGTNACC 1 cut(s) 583
EcoO65I GGTNACC 1 cut(s) 583
EcoRII CCWGG 2 cut(s) 936, 1006
EcoT14I CCWWGG 2 cut(s) 39, 126
EcoT22I ATGCAT 1 cut(s) 914
ErhI CCWWGG 2 cut(s) 39, 126
FaeI CATG 8 cut(s) 43, 130, 246, 256, 562, 889, 1601, 1639
FaqI GGGAC 1 cut(s) 989
FatI CATG 8 cut(s) 39, 126, 242, 252, 558, 885, 1597, 1635
FbaI TGATCA 2 cut(s) 916, 949
FblI GTMKAC 2 cut(s) 1085, 1640
Fnu4HI GCNGC 3 cut(s) 276, 525, 1560
FokI GGATG 3 cut(s) 460, 575, 921
Fsp4HI GCNGC 3 cut(s) 276, 525, 1560
FspBI CTAG 1 cut(s) 437
GluI GCNGC 3 cut(s) 276, 525, 1560
GsaI CCCAGC 1 cut(s) 869
GsuI CTGGAG 1 cut(s) 429
HaeIII GGCC 4 cut(s) 5, 1195, 1330, 1464
HapII CCGG 3 cut(s) 268, 1271, 1406
HgaI GACGC 1 cut(s) 1535
Hin1II CATG 8 cut(s) 43, 130, 246, 256, 562, 889, 1601, 1639
HincII GTYRAC 1 cut(s) 147
HindII GTYRAC 1 cut(s) 147
HindIII AAGCTT 2 cut(s) 548, 773
HpaII CCGG 3 cut(s) 268, 1271, 1406
HphI GGTGA 2 cut(s) 595, 1220
Hpy166II GTNNAC 6 cut(s) 46, 147, 1086, 1416, 1528, 1641
Hpy188I TCNGA 3 cut(s) 82, 222, 1434
Hpy188III TCNNGA 6 cut(s) 446, 477, 752, 944, 1169, 1307
Hpy8I GTNNAC 6 cut(s) 46, 147, 1086, 1416, 1528, 1641
HpyAV CCTTC 6 cut(s) 542, 749, 1109, 1259, 1394, 1480
HpyCH4III ACNGT 3 cut(s) 333, 1420, 1519
HpyF10VI GCNNNNNNNGC 2 cut(s) 180, 1519
HpyF3I CTNAG 1 cut(s) 1041
Hsp92II CATG 8 cut(s) 43, 130, 246, 256, 562, 889, 1601, 1639
KpnI GGTACC 1 cut(s) 1493
Ksp22I TGATCA 2 cut(s) 916, 949
Kzo9I GATC 7 cut(s) 217, 916, 940, 949, 1210, 1345, 1429
LmnI GCTCC 2 cut(s) 1129, 1291
Lsp1109I GCAGC 2 cut(s) 536, 1546
LweI GCATC 2 cut(s) 647, 899
MaeI CTAG 1 cut(s) 437
MaeIII GTNAC 4 cut(s) 439, 583, 806, 1420
MalI GATC 7 cut(s) 219, 918, 942, 951, 1212, 1347, 1431
MboI GATC 7 cut(s) 217, 916, 940, 949, 1210, 1345, 1429
MboII GAAGA 7 cut(s) 61, 319, 425, 655, 682, 808, 1463
MfeI CAATTG 3 cut(s) 361, 1197, 1332
MflI RGATCY 4 cut(s) 217, 940, 1210, 1345
MhlI GDGCHC 4 cut(s) 347, 1180, 1318, 1530
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 6 cut(s) 86, 436, 474, 564, 1104, 1621
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 914
MroXI GAANNNNTTC 2 cut(s) 227, 763
MscI TGGCCA 1 cut(s) 5
MseI TTAA 9 cut(s) 116, 207, 389, 518, 675, 834, 845, 854, 879
MslI CAYNNNNRTG 4 cut(s) 563, 1239, 1374, 1508
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 865
MspCI CTTAAG 1 cut(s) 844
MspI CCGG 3 cut(s) 268, 1271, 1406
MspR9I CCNGG 3 cut(s) 268, 938, 1008
MunI CAATTG 3 cut(s) 361, 1197, 1332
MvaI CCWGG 2 cut(s) 938, 1008
MwoI GCNNNNNNNGC 2 cut(s) 180, 1519
NciI CCSGG 1 cut(s) 268
NcoI CCATGG 2 cut(s) 39, 126
NdeII GATC 7 cut(s) 217, 916, 940, 949, 1210, 1345, 1429
NlaIII CATG 8 cut(s) 43, 130, 246, 256, 562, 889, 1601, 1639
NlaIV GGNNCC 4 cut(s) 760, 1212, 1347, 1491
NmuCI GTSAC 3 cut(s) 439, 583, 1420
NsiI ATGCAT 1 cut(s) 914
NspI RCATGY 2 cut(s) 246, 256
PaqCI CACCTGC 1 cut(s) 1513
PciI ACATGT 1 cut(s) 252
PdmI GAANNNNTTC 2 cut(s) 227, 763
PfeI GAWTC 7 cut(s) 281, 508, 659, 748, 1158, 1296, 1594
PfoI TCCNGGA 1 cut(s) 936
PkrI GCNGC 3 cut(s) 277, 526, 1561
PleI GAGTC 6 cut(s) 85, 436, 474, 563, 1103, 1620
PpsI GAGTC 6 cut(s) 85, 436, 474, 563, 1103, 1620
PscI ACATGT 1 cut(s) 252
Psp6I CCWGG 2 cut(s) 936, 1006
PspEI GGTNACC 1 cut(s) 583
PspFI CCCAGC 1 cut(s) 865
PspGI CCWGG 2 cut(s) 936, 1006
PspN4I GGNNCC 4 cut(s) 760, 1212, 1347, 1491
PspPI GGNCC 3 cut(s) 470, 1268, 1403
PstI CTGCAG 1 cut(s) 526
PstNI CAGNNNCTG 1 cut(s) 1424
PsuI RGATCY 4 cut(s) 217, 940, 1210, 1345
RsaI GTAC 5 cut(s) 235, 335, 926, 1491, 1651
RsaNI GTAC 5 cut(s) 234, 334, 925, 1490, 1650
RseI CAYNNNNRTG 4 cut(s) 563, 1239, 1374, 1508
SaqAI TTAA 9 cut(s) 116, 207, 389, 518, 675, 834, 845, 854, 879
SatI GCNGC 3 cut(s) 276, 525, 1560
Sau3AI GATC 7 cut(s) 217, 916, 940, 949, 1210, 1345, 1429
Sau96I GGNCC 3 cut(s) 470, 1268, 1403
ScaI AGTACT 1 cut(s) 335
SchI GAGTC 6 cut(s) 86, 436, 474, 564, 1104, 1621
ScrFI CCNGG 3 cut(s) 268, 938, 1008
SduI GDGCHC 4 cut(s) 347, 1180, 1318, 1530
SfaNI GCATC 2 cut(s) 647, 899
SfcI CTRYAG 1 cut(s) 522
SinI GGWCC 3 cut(s) 470, 1268, 1403
SmiI ATTTAAAT 1 cut(s) 390
SmiMI CAYNNNNRTG 4 cut(s) 563, 1239, 1374, 1508
SmlI CTYRAG 3 cut(s) 844, 1245, 1380
SmoI CTYRAG 3 cut(s) 844, 1245, 1380
SsiI CCGC 3 cut(s) 275, 628, 863
SspMI CTAG 1 cut(s) 437
StyD4I CCNGG 3 cut(s) 266, 936, 1006
StyI CCWWGG 2 cut(s) 39, 126
SwaI ATTTAAAT 1 cut(s) 390
TaaI ACNGT 3 cut(s) 333, 1420, 1519
TaqI TCGA 1 cut(s) 641
TatI WGTACW 2 cut(s) 333, 924
TauI GCSGC 1 cut(s) 278
TfiI GAWTC 7 cut(s) 281, 508, 659, 748, 1158, 1296, 1594
Tru1I TTAA 9 cut(s) 116, 207, 389, 518, 675, 834, 845, 854, 879
Tru9I TTAA 9 cut(s) 116, 207, 389, 518, 675, 834, 845, 854, 879
TscAI CASTG 1 cut(s) 1425
TseFI GTSAC 3 cut(s) 439, 583, 1420
TseI GCWGC 2 cut(s) 524, 1559
Tsp45I GTSAC 3 cut(s) 439, 583, 1420
TspDTI ATGAA 4 cut(s) 82, 714, 1494, 1607
TspGWI ACGGA 1 cut(s) 221
TspRI CASTG 1 cut(s) 1425
Vha464I CTTAAG 1 cut(s) 844
VneI GTGCAC 1 cut(s) 1526
VpaK11BI GGWCC 3 cut(s) 470, 1268, 1403
XapI RAATTY 2 cut(s) 616, 689
XceI RCATGY 2 cut(s) 246, 256
XmiI GTMKAC 2 cut(s) 1085, 1640
XmnI GAANNNNTTC 2 cut(s) 227, 763
XspI CTAG 1 cut(s) 437
ZrmI AGTACT 1 cut(s) 335
Zsp2I ATGCAT 1 cut(s) 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.