pycom11g07230

Protein of unknown function (DUF674)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
5483925 .. 5485136
1212 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g07230.1

Sequence Viewer

Length: 1008 bp
ATGAACATGGAGACCATTTTTACAACGAAACAAGCTGAAGGTGGTGGGGTTTTTGTGGAAGCACCAGGGAGATTTATTATTAGTGATGATTTACAGGTACTGCCTCCATTTACTTGTGCAGTATCTTCTGTAGTTTCGAACCATGGACTCATGGGCTGGAAAAGCGTTGAGGAGCTGACTTTTAATGTGGGAGTAGATGAGGTTTTGAATTTGCTTATGCGCTCATTAGTATCAGAGACACCTCTGACTGAAACTCTGCTGAAGGATAAAACCATACCAAACGTGATTGATGAAAATCTTGACCAAGATTTATGTATTGAATATCGAGAGGTGGGAGGATTTTGGGAAGAAAAGATTTCTATCAAACTTATAGTTAGCAAATCTAAGAAGAAGGTTTATTATGCCGAAGTGGGGGAGGATTTTGTTAACTTACTCTTCAGTTTCTTGACTCTTCCACTAGGGTTTGTTGTAAAACAAATGCAACATAACTCTTTGAAAGGTTGCATTGACCAGCTGTACAGAAGTGTCGAAGATCTTGATGAGCAGTACTTGAAGTCAAATTTACACAAGAAAAAGTTGGTGAGTCCTAAGCTTCTCCCTGGATTTGGCTACAAGAATCATCTTCTGGGAATTGAGGAAGCATCGTATAAATGGACTGACTCCGTAGAACGCAAATCCCATTGTAAAGAAGATTGTATTGACTTCGTGGACCCCAAATCCCATCATAAAGAAGATGATAAAGGTTGTGGATTCTTGAAAGGACCTGCGATGTTCATGGTAACTGACAGTCTCAATGTAAGTCCAATATCTGCAATTGTCGGCATGTCAATTCTATGCGAACTGAACGTACCTGTGACTGATGTTGAGGTACAAGTGGCTCATGTGGGGAAAGAGGAGGCTATCCGTCTTTTGATGGCTTCTTTTGTTTGTGCCTCTGCTTTAACTAGTGTCTTCCTTACGAAGCCGAAGCGATTTGGAGATTTAGGGTGCCTAAGTTTTCTATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

336

Amino Acids

37.4

Weight (kDa)

5.29

Isoelectric Point (pI)

32.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 9 - 298 1.3e-72 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 772
AccB1I GGYRCC 1 cut(s) 987
AcsI RAATTY 2 cut(s) 208, 559
AcuI CTGAAG 3 cut(s) 57, 281, 421
AfaI GTAC 5 cut(s) 99, 518, 548, 849, 870
AfiI CCNNNNNNNGG 2 cut(s) 411, 605
AgsI TTSAA 5 cut(s) 208, 320, 496, 553, 757
AhlI ACTAGT 1 cut(s) 944
AjnI CCWGG 2 cut(s) 64, 598
AluBI AGCT 4 cut(s) 35, 175, 514, 592
AluI AGCT 4 cut(s) 35, 175, 514, 592
Alw26I GTCTC 3 cut(s) 5, 230, 794
AlwNI CAGNNNCTG 1 cut(s) 100
ApoI RAATTY 2 cut(s) 208, 559
AspLEI GCGC 1 cut(s) 222
AspS9I GGNCC 2 cut(s) 709, 761
AsuHPI GGTGA 1 cut(s) 592
AsuII TTCGAA 1 cut(s) 137
AvaII GGWCC 2 cut(s) 709, 761
BanI GGYRCC 1 cut(s) 987
BbsI GAAGAC 1 cut(s) 943
BccI CCATC 2 cut(s) 729, 907
BciT130I CCWGG 2 cut(s) 66, 600
BcoDI GTCTC 3 cut(s) 5, 230, 794
BcuI ACTAGT 1 cut(s) 944
BfaI CTAG 2 cut(s) 458, 945
BfmI CTRYAG 1 cut(s) 129
BfuAI ACCTGC 1 cut(s) 772
BglII AGATCT 1 cut(s) 532
BmcAI AGTACT 1 cut(s) 548
Bme1390I CCNGG 2 cut(s) 66, 600
Bme18I GGWCC 2 cut(s) 709, 761
BmgT120I GGNCC 2 cut(s) 709, 761
BmiI GGNNCC 2 cut(s) 711, 989
BmrFI CCNGG 2 cut(s) 66, 600
BmsI GCATC 1 cut(s) 650
BpiI GAAGAC 1 cut(s) 943
Bpu10I CCTNAGC 1 cut(s) 588
Bpu14I TTCGAA 1 cut(s) 137
BsaBI GATNNNNATC 2 cut(s) 294, 359
BsaI GGTCTC 1 cut(s) 5
BsaJI CCNNGG 3 cut(s) 65, 142, 598
Bsc4I CCNNNNNNNGG 2 cut(s) 411, 605
Bse8I GATNNNNATC 2 cut(s) 294, 359
BseBI CCWGG 2 cut(s) 66, 600
BseDI CCNNGG 3 cut(s) 65, 142, 598
BseJI GATNNNNATC 2 cut(s) 294, 359
BseLI CCNNNNNNNGG 2 cut(s) 411, 605
BseRI GAGGAG 2 cut(s) 185, 908
BsgI GTGCAG 1 cut(s) 138
BshNI GGYRCC 1 cut(s) 987
BslI CCNNNNNNNGG 2 cut(s) 411, 605
BsmAI GTCTC 3 cut(s) 5, 230, 794
Bso31I GGTCTC 1 cut(s) 5
Bsp119I TTCGAA 1 cut(s) 137
Bsp1407I TGTACA 1 cut(s) 516
Bsp143I GATC 1 cut(s) 532
Bsp19I CCATGG 1 cut(s) 142
BspLI GGNNCC 2 cut(s) 711, 989
BspMI ACCTGC 1 cut(s) 772
BspT104I TTCGAA 1 cut(s) 137
BspT107I GGYRCC 1 cut(s) 987
BspTNI GGTCTC 1 cut(s) 5
BsrGI TGTACA 1 cut(s) 516
BssECI CCNNGG 3 cut(s) 65, 142, 598
BssMI GATC 1 cut(s) 532
BssT1I CCWWGG 1 cut(s) 142
Bst2UI CCWGG 2 cut(s) 66, 600
Bst4CI ACNGT 1 cut(s) 788
Bst6I CTCTTC 2 cut(s) 440, 456
BstAUI TGTACA 1 cut(s) 516
BstBI TTCGAA 1 cut(s) 137
BstDEI CTNAG 3 cut(s) 384, 588, 992
BstDSI CCRYGG 1 cut(s) 142
BstHHI GCGC 1 cut(s) 222
BstKTI GATC 1 cut(s) 535
BstMAI GTCTC 3 cut(s) 5, 230, 794
BstMBI GATC 1 cut(s) 532
BstMWI GCNNNNNNNGC 1 cut(s) 162
BstNI CCWGG 2 cut(s) 66, 600
BstNSI RCATGY 1 cut(s) 826
BstSCI CCNGG 2 cut(s) 64, 598
BstSFI CTRYAG 1 cut(s) 129
BstV2I GAAGAC 1 cut(s) 943
BstX2I RGATCY 1 cut(s) 532
BstYI RGATCY 1 cut(s) 532
BtgI CCRYGG 1 cut(s) 142
BtgZI GCGATG 1 cut(s) 782
BveI ACCTGC 1 cut(s) 772
CaiI CAGNNNCTG 1 cut(s) 100
CfoI GCGC 1 cut(s) 222
Cfr13I GGNCC 2 cut(s) 709, 761
Csp6I GTAC 5 cut(s) 98, 517, 547, 848, 869
CviAII CATG 6 cut(s) 7, 143, 151, 775, 823, 881
CviQI GTAC 5 cut(s) 98, 517, 547, 848, 869
DdeI CTNAG 3 cut(s) 384, 588, 992
DpnI GATC 1 cut(s) 534
DpnII GATC 1 cut(s) 532
Eam1104I CTCTTC 2 cut(s) 440, 456
EarI CTCTTC 2 cut(s) 440, 456
Eco130I CCWWGG 1 cut(s) 142
Eco31I GGTCTC 1 cut(s) 5
Eco47I GGWCC 2 cut(s) 709, 761
Eco57I CTGAAG 3 cut(s) 57, 281, 421
EcoO109I RGGNCCY 1 cut(s) 761
EcoRII CCWGG 2 cut(s) 64, 598
EcoT14I CCWWGG 1 cut(s) 142
ErhI CCWWGG 1 cut(s) 142
FaeI CATG 6 cut(s) 10, 146, 154, 778, 826, 884
FatI CATG 6 cut(s) 6, 142, 150, 774, 822, 880
FspBI CTAG 2 cut(s) 458, 945
GlaI GCGC 1 cut(s) 221
HhaI GCGC 1 cut(s) 222
Hin1II CATG 6 cut(s) 10, 146, 154, 778, 826, 884
Hin6I GCGC 1 cut(s) 220
HinP1I GCGC 1 cut(s) 220
HincII GTYRAC 1 cut(s) 427
HindII GTYRAC 1 cut(s) 427
HindIII AAGCTT 1 cut(s) 590
HinfI GANTC 6 cut(s) 147, 448, 583, 616, 659, 750
HpaI GTTAAC 1 cut(s) 427
HphI GGTGA 1 cut(s) 592
Hpy166II GTNNAC 2 cut(s) 427, 709
Hpy188I TCNGA 2 cut(s) 235, 246
Hpy188III TCNNGA 5 cut(s) 299, 326, 445, 536, 754
Hpy8I GTNNAC 2 cut(s) 427, 709
HpyAV CCTTC 3 cut(s) 32, 256, 385
HpyCH4III ACNGT 1 cut(s) 788
HpyCH4IV ACGT 2 cut(s) 282, 846
HpyCH4V TGCA 4 cut(s) 119, 481, 504, 812
HpyF10VI GCNNNNNNNGC 1 cut(s) 162
HpyF3I CTNAG 3 cut(s) 384, 588, 992
HpySE526I ACGT 2 cut(s) 282, 846
Hsp92II CATG 6 cut(s) 10, 146, 154, 778, 826, 884
HspAI GCGC 1 cut(s) 220
KspAI GTTAAC 1 cut(s) 427
Kzo9I GATC 1 cut(s) 532
LmnI GCTCC 1 cut(s) 172
LweI GCATC 1 cut(s) 650
MaeI CTAG 2 cut(s) 458, 945
MaeII ACGT 2 cut(s) 282, 846
MaeIII GTNAC 2 cut(s) 778, 853
MalI GATC 1 cut(s) 534
MboI GATC 1 cut(s) 532
MfeI CAATTG 1 cut(s) 813
MflI RGATCY 1 cut(s) 532
MluCI AATT 5 cut(s) 208, 559, 630, 813, 828
MlyI GAGTC 4 cut(s) 141, 442, 592, 653
MseI TTAA 4 cut(s) 183, 426, 941, 1006
MspA1I CMGCKG 1 cut(s) 514
MspR9I CCNGG 2 cut(s) 66, 600
MunI CAATTG 1 cut(s) 813
MvaI CCWGG 2 cut(s) 66, 600
MwoI GCNNNNNNNGC 1 cut(s) 162
NcoI CCATGG 1 cut(s) 142
NdeII GATC 1 cut(s) 532
NlaIII CATG 6 cut(s) 10, 146, 154, 778, 826, 884
NlaIV GGNNCC 2 cut(s) 711, 989
NmuCI GTSAC 1 cut(s) 853
NspI RCATGY 1 cut(s) 826
NspV TTCGAA 1 cut(s) 137
PfeI GAWTC 2 cut(s) 616, 750
PleI GAGTC 4 cut(s) 141, 442, 591, 653
PpsI GAGTC 4 cut(s) 141, 442, 591, 653
PpuMI RGGWCCY 1 cut(s) 761
Psp5II RGGWCCY 1 cut(s) 761
Psp6I CCWGG 2 cut(s) 64, 598
PspGI CCWGG 2 cut(s) 64, 598
PspN4I GGNNCC 2 cut(s) 711, 989
PspPI GGNCC 2 cut(s) 709, 761
PspPPI RGGWCCY 1 cut(s) 761
PsrI GAACNNNNNNTAC 2 cut(s) 831, 863
PstNI CAGNNNCTG 1 cut(s) 100
PsuI RGATCY 1 cut(s) 532
PvuII CAGCTG 1 cut(s) 514
RsaI GTAC 5 cut(s) 99, 518, 548, 849, 870
RsaNI GTAC 5 cut(s) 98, 517, 547, 848, 869
SaqAI TTAA 4 cut(s) 183, 426, 941, 1006
Sau3AI GATC 1 cut(s) 532
Sau96I GGNCC 2 cut(s) 709, 761
ScaI AGTACT 1 cut(s) 548
SchI GAGTC 4 cut(s) 141, 442, 592, 653
ScrFI CCNGG 2 cut(s) 66, 600
SfaNI GCATC 1 cut(s) 650
SfcI CTRYAG 1 cut(s) 129
SfuI TTCGAA 1 cut(s) 137
SinI GGWCC 2 cut(s) 709, 761
SpeI ACTAGT 1 cut(s) 944
Sse9I AATT 5 cut(s) 208, 559, 630, 813, 828
SspMI CTAG 2 cut(s) 458, 945
StyD4I CCNGG 2 cut(s) 64, 598
StyI CCWWGG 1 cut(s) 142
TaaI ACNGT 1 cut(s) 788
TaiI ACGT 2 cut(s) 285, 849
TaqI TCGA 3 cut(s) 137, 325, 528
TasI AATT 5 cut(s) 208, 559, 630, 813, 828
TatI WGTACW 2 cut(s) 516, 546
TfiI GAWTC 2 cut(s) 616, 750
Tru1I TTAA 4 cut(s) 183, 426, 941, 1006
Tru9I TTAA 4 cut(s) 183, 426, 941, 1006
TseFI GTSAC 1 cut(s) 853
Tsp45I GTSAC 1 cut(s) 853
TspDTI ATGAA 3 cut(s) 17, 306, 763
TspGWI ACGGA 2 cut(s) 652, 893
VpaK11BI GGWCC 2 cut(s) 709, 761
XapI RAATTY 2 cut(s) 208, 559
XceI RCATGY 1 cut(s) 826
XspI CTAG 2 cut(s) 458, 945
ZrmI AGTACT 1 cut(s) 548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.