RLG00000013235

BEST Arabidopsis thaliana protein match is Protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000148
Physical Location & Seq
Forward (+)
28136482 .. 28138273
1792 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013235

Sequence Viewer

Length: 1506 bp
ATGGCTAATAAATCCATGAATAGTATTAGCTTCAAGGCACTGGTGGACAAGCGGAGCAACAAAGTTATCTTCATAGAAACTGATAATGATTTTGTTGATGTTCTCTTCAGTTTCTTGACAATACCAATGGGAACAATCATCAGACTTGCCCGTAAACATTCATTACCAGTGGAAACAGGTTGCATGAACAATTTGTATGCAAGTGTTGAAAATATTGATGCACGTATTTTCCAGACTGGAGCATGTAAAGACATGTTGCTGTGTCCTCGCAGTGGGGCTGAACTTCATTGCAAGAATCTCCAATTGAAGATTAACAATGATGAGCCCACACAGTACTTTTCGTGCTCTAAGAATTGCCCGATTTACACCAACGGTTATAAATTATTTAGTCATTACAAAGATGTTCTTTGTATGTGTGGAGAACCCATGGATAATGAGATACCTCTTTCAGTGGGAAAGTTGAAGAAATCCTCTTCTGCAGATGGTGGAGTGTTCTGTAAAGGACTAACCAGATTTATAATTACTGATGATCTAGAAGTGATGCCACCATCAAGTTCGGCGATCTGTTCTTTATTTACTAAGCTTAAAGTCATGGATGCTAGTACTACTGAGGAGCTGGCTTTCAATGTAGGATTTGGTGAGGTTTTGGAAATGCTTGTATGCTCATTAGTATCAAAGATTCCTTTGTCAGAAACTCTTCTGAAGCTTAAATCACAACCAAACTTGAGCAATGAATATCCAAATCAAGGAATATGTATTGAACCTCAAACAGTAGGAAGCTGTATGAATGAGGAAGACACCATTTCTGTGAAGCTTATTATTTGCAAATCTCAGAAGATTGTTTGTTATGCAGAAGCAGGGGAGGATTTTGTCAATTTACTTTTCAGTTTCCTGACCGTTCCACTTGGGTTTATAATAAAACAGATCCAGGATAGGTCGTCCTCTTTGAAAGGAAGCATTGAGCAGCTGTACAAGAGTGTCCAGGATCTTGATGATGAATTCTTCAAATCAAATTACCAGAAGGAAATTTTACTCAATCCAAAGCTTTACCCTGGTTTTTGCTATGAGAACCGTCTTTTAGGAATTGAGTATGGCCTGGAGACCTCGAATTATTATGCACGCTACTGGACAGGTGGTCCCCATACTGAAGTGGTGACTTCTGATAAAGACTTTGTTCCTTCCTATTCTTCTTATAGGCCATCAGTGACTACTGTCCCACTTAAACTTAAGTATTGCGAGACTCAATTTGACGCCGTACGTGGTCAAGGATTTTTGAATGGACCGACAATGTTTACAATTACTGACAATATGATCATAAGGCCCATATCTCCTCTATTTGGCCTTTCTGTTTTAAACAAAATGAAAGTACCATTCACTGATATTGAGGAGCAAATTGTGCAGGTTGGAAAGGAGGAGGCTTTTCGCCTTCTGGTAACATCTTTTCTTTGTGACTCTTCTCTCACCAGCGTCTTCCTTAGGCAGCCAAAGAGCAAATTCGAACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

502

Amino Acids

56.23

Weight (kDa)

5.55

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 8 - 471 3.1e-127 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 378, 518, 914
Acc36I ACCTGC 1 cut(s) 1390
AciI CCGC 1 cut(s) 52
AclWI GGATC 2 cut(s) 919, 993
AcsI RAATTY 3 cut(s) 998, 1026, 1493
AcuI CTGAAG 3 cut(s) 91, 722, 1167
AcyI GRCGYC 1 cut(s) 1251
AfaI GTAC 5 cut(s) 335, 604, 971, 1257, 1368
AfiI CCNNNNNNNGG 3 cut(s) 272, 746, 1337
AflII CTTAAG 1 cut(s) 1226
AflIII ACRYGT 1 cut(s) 252
AgsI TTSAA 9 cut(s) 34, 209, 307, 463, 625, 761, 949, 1006, 1276
AhdI GACNNNNNGTC 1 cut(s) 1134
AjnI CCWGG 4 cut(s) 927, 981, 1051, 1095
AluBI AGCT 8 cut(s) 30, 583, 616, 706, 780, 814, 967, 1045
AluI AGCT 8 cut(s) 30, 583, 616, 706, 780, 814, 967, 1045
Alw21I GWGCWC 1 cut(s) 347
Alw26I GTCTC 2 cut(s) 1094, 1232
AlwI GGATC 2 cut(s) 919, 993
AoxI GGCC 4 cut(s) 1093, 1196, 1319, 1339
ApeKI GCWGC 2 cut(s) 964, 1480
ApoI RAATTY 3 cut(s) 998, 1026, 1493
Asp700I GAANNNNTTC 1 cut(s) 696
AspS9I GGNCC 3 cut(s) 1136, 1280, 1320
AsuHPI GGTGA 3 cut(s) 650, 1165, 1453
AsuII TTCGAA 1 cut(s) 1497
AvaII GGWCC 2 cut(s) 1136, 1280
AxyI CCTNAGG 1 cut(s) 1475
BanII GRGCYC 1 cut(s) 327
BbsI GAAGAC 2 cut(s) 801, 1462
Bbv12I GWGCWC 1 cut(s) 347
BbvI GCAGC 2 cut(s) 976, 1492
BccI CCATC 3 cut(s) 476, 556, 1207
BceAI ACGGC 1 cut(s) 1238
BciT130I CCWGG 4 cut(s) 929, 983, 1053, 1097
BclI TGATCA 1 cut(s) 1311
BcoDI GTCTC 2 cut(s) 1094, 1232
BfaI CTAG 2 cut(s) 533, 600
BfmI CTRYAG 1 cut(s) 477
BfrI CTTAAG 1 cut(s) 1226
BfuAI ACCTGC 1 cut(s) 1390
BisI GCNGC 2 cut(s) 965, 1481
BlsI GCNGC 2 cut(s) 966, 1482
BmcAI AGTACT 2 cut(s) 335, 604
Bme1390I CCNGG 4 cut(s) 929, 983, 1053, 1097
Bme18I GGWCC 2 cut(s) 1136, 1280
BmeRI GACNNNNNGTC 1 cut(s) 1134
BmgT120I GGNCC 3 cut(s) 1136, 1280, 1320
BmiI GGNNCC 1 cut(s) 1138
BmrFI CCNGG 4 cut(s) 929, 983, 1053, 1097
BmsI GCATC 3 cut(s) 208, 531, 586
BoxI GACNNNNGTC 1 cut(s) 1211
BpiI GAAGAC 2 cut(s) 801, 1462
BpmI CTGGAG 2 cut(s) 258, 1118
Bpu14I TTCGAA 1 cut(s) 1497
BpuEI CTTGAG 1 cut(s) 745
BsaAI YACGTR 2 cut(s) 224, 1259
BsaHI GRCGYC 1 cut(s) 1251
BsaI GGTCTC 1 cut(s) 1094
BsaJI CCNNGG 2 cut(s) 426, 1051
Bsc4I CCNNNNNNNGG 3 cut(s) 272, 746, 1337
Bse1I ACTGG 4 cut(s) 45, 167, 241, 1130
Bse21I CCTNAGG 1 cut(s) 1475
Bse3DI GCAATG 2 cut(s) 286, 736
BseBI CCWGG 4 cut(s) 929, 983, 1053, 1097
BseDI CCNNGG 2 cut(s) 426, 1051
BseGI GGATG 1 cut(s) 601
BseLI CCNNNNNNNGG 3 cut(s) 272, 746, 1337
BseMI GCAATG 2 cut(s) 286, 736
BseMII CTCAG 2 cut(s) 600, 845
BseNI ACTGG 4 cut(s) 45, 167, 241, 1130
BseRI GAGGAG 4 cut(s) 626, 1320, 1400, 1427
BseXI GCAGC 2 cut(s) 976, 1492
BsgI GTGCAG 1 cut(s) 1418
BshFI GGCC 4 cut(s) 1095, 1198, 1321, 1341
BsiHKAI GWGCWC 1 cut(s) 347
BsiWI CGTACG 1 cut(s) 1255
BslFI GGGAC 2 cut(s) 1122, 1199
BslI CCNNNNNNNGG 3 cut(s) 272, 746, 1337
BsmAI GTCTC 2 cut(s) 1094, 1232
BsmFI GGGAC 2 cut(s) 1122, 1199
BsnI GGCC 4 cut(s) 1095, 1198, 1321, 1341
Bso31I GGTCTC 1 cut(s) 1094
Bsp119I TTCGAA 1 cut(s) 1497
Bsp1286I GDGCHC 2 cut(s) 327, 347
Bsp1407I TGTACA 1 cut(s) 969
Bsp143I GATC 5 cut(s) 529, 561, 924, 985, 1311
Bsp19I CCATGG 1 cut(s) 426
BspACI CCGC 1 cut(s) 52
BspANI GGCC 4 cut(s) 1095, 1198, 1321, 1341
BspCNI CTCAG 2 cut(s) 601, 844
BspLI GGNNCC 1 cut(s) 1138
BspMAI CTGCAG 1 cut(s) 481
BspMI ACCTGC 1 cut(s) 1390
BspPI GGATC 2 cut(s) 919, 993
BspT104I TTCGAA 1 cut(s) 1497
BspTI CTTAAG 1 cut(s) 1226
BspTNI GGTCTC 1 cut(s) 1094
BsrDI GCAATG 2 cut(s) 286, 736
BsrGI TGTACA 1 cut(s) 969
BsrI ACTGG 4 cut(s) 45, 167, 241, 1130
BssECI CCNNGG 2 cut(s) 426, 1051
BssMI GATC 5 cut(s) 529, 561, 924, 985, 1311
BssNI GRCGYC 1 cut(s) 1251
BssT1I CCWWGG 1 cut(s) 426
Bst2UI CCWGG 4 cut(s) 929, 983, 1053, 1097
Bst4CI ACNGT 6 cut(s) 333, 374, 772, 898, 1073, 1213
Bst6I CTCTTC 4 cut(s) 110, 478, 702, 1459
BstACI GRCGYC 1 cut(s) 1251
BstAFI CTTAAG 1 cut(s) 1226
BstAPI GCANNNNNTGC 1 cut(s) 1396
BstAUI TGTACA 1 cut(s) 969
BstBAI YACGTR 2 cut(s) 224, 1259
BstBI TTCGAA 1 cut(s) 1497
BstC8I GCNNGC 2 cut(s) 618, 1120
BstDEI CTNAG 5 cut(s) 348, 579, 609, 831, 1475
BstDSI CCRYGG 1 cut(s) 426
BstF5I GGATG 1 cut(s) 601
BstKTI GATC 5 cut(s) 532, 564, 927, 988, 1314
BstMAI GTCTC 2 cut(s) 1094, 1232
BstMBI GATC 5 cut(s) 529, 561, 924, 985, 1311
BstMWI GCNNNNNNNGC 1 cut(s) 1396
BstNI CCWGG 4 cut(s) 929, 983, 1053, 1097
BstNSI RCATGY 2 cut(s) 246, 256
BstPAI GACNNNNGTC 1 cut(s) 1211
BstSCI CCNGG 4 cut(s) 927, 981, 1051, 1095
BstSFI CTRYAG 1 cut(s) 477
BstV1I GCAGC 2 cut(s) 976, 1492
BstV2I GAAGAC 2 cut(s) 801, 1462
BstX2I RGATCY 2 cut(s) 924, 985
BstYI RGATCY 2 cut(s) 924, 985
Bsu36I CCTNAGG 1 cut(s) 1475
BsuRI GGCC 4 cut(s) 1095, 1198, 1321, 1341
BtgI CCRYGG 1 cut(s) 426
BtsCI GGATG 1 cut(s) 601
BtsI GCAGTG 1 cut(s) 277
BtsIMutI CAGTG 6 cut(s) 38, 174, 277, 456, 1209, 1374
BveI ACCTGC 1 cut(s) 1390
Cac8I GCNNGC 2 cut(s) 618, 1120
Cfr13I GGNCC 3 cut(s) 1136, 1280, 1320
CseI GACGC 2 cut(s) 1259, 1456
Csp6I GTAC 5 cut(s) 334, 603, 970, 1256, 1367
CviAII CATG 6 cut(s) 16, 184, 243, 253, 427, 592
CviQI GTAC 5 cut(s) 334, 603, 970, 1256, 1367
DdeI CTNAG 5 cut(s) 348, 579, 609, 831, 1475
DpnI GATC 5 cut(s) 531, 563, 926, 987, 1313
DpnII GATC 5 cut(s) 529, 561, 924, 985, 1311
DraI TTTAAA 1 cut(s) 1353
DriI GACNNNNNGTC 1 cut(s) 1134
Eam1104I CTCTTC 4 cut(s) 110, 478, 702, 1459
Eam1105I GACNNNNNGTC 1 cut(s) 1134
EarI CTCTTC 4 cut(s) 110, 478, 702, 1459
Eco130I CCWWGG 1 cut(s) 426
Eco24I GRGCYC 1 cut(s) 327
Eco31I GGTCTC 1 cut(s) 1094
Eco47I GGWCC 2 cut(s) 1136, 1280
Eco57I CTGAAG 3 cut(s) 91, 722, 1167
Eco81I CCTNAGG 1 cut(s) 1475
EcoRI GAATTC 1 cut(s) 998
EcoRII CCWGG 4 cut(s) 927, 981, 1051, 1095
EcoT14I CCWWGG 1 cut(s) 426
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 1 cut(s) 426
FaeI CATG 6 cut(s) 19, 187, 246, 256, 430, 595
FalI AAGNNNNNCTT 2 cut(s) 390, 422
FaqI GGGAC 2 cut(s) 1122, 1199
FatI CATG 6 cut(s) 15, 183, 242, 252, 426, 591
FbaI TGATCA 1 cut(s) 1311
Fnu4HI GCNGC 2 cut(s) 965, 1481
FokI GGATG 1 cut(s) 608
FriOI GRGCYC 1 cut(s) 327
Fsp4HI GCNGC 2 cut(s) 965, 1481
FspBI CTAG 2 cut(s) 533, 600
GluI GCNGC 2 cut(s) 965, 1481
GsuI CTGGAG 2 cut(s) 258, 1118
HaeIII GGCC 4 cut(s) 1095, 1198, 1321, 1341
HgaI GACGC 2 cut(s) 1259, 1456
Hin1I GRCGYC 1 cut(s) 1251
Hin1II CATG 6 cut(s) 19, 187, 246, 256, 430, 595
HindIII AAGCTT 4 cut(s) 581, 704, 812, 1043
HinfI GANTC 4 cut(s) 295, 679, 1240, 1451
HphI GGTGA 3 cut(s) 650, 1165, 1453
Hpy166II GTNNAC 3 cut(s) 46, 155, 1293
Hpy188I TCNGA 5 cut(s) 143, 691, 702, 834, 1162
Hpy188III TCNNGA 5 cut(s) 115, 232, 533, 892, 989
Hpy8I GTNNAC 3 cut(s) 46, 155, 1293
HpyAV CCTTC 3 cut(s) 1015, 1188, 1436
HpyCH4III ACNGT 6 cut(s) 333, 374, 772, 898, 1073, 1213
HpyCH4IV ACGT 2 cut(s) 223, 1258
HpyCH4V TGCA 9 cut(s) 183, 200, 221, 291, 479, 825, 851, 1118, 1399
HpyF10VI GCNNNNNNNGC 1 cut(s) 1396
HpyF3I CTNAG 5 cut(s) 348, 579, 609, 831, 1475
HpySE526I ACGT 2 cut(s) 223, 1258
Hsp92I GRCGYC 1 cut(s) 1251
Hsp92II CATG 6 cut(s) 19, 187, 246, 256, 430, 595
Ksp22I TGATCA 1 cut(s) 1311
Kzo9I GATC 5 cut(s) 529, 561, 924, 985, 1311
LmnI GCTCC 4 cut(s) 54, 239, 613, 1387
Lsp1109I GCAGC 2 cut(s) 976, 1492
LweI GCATC 3 cut(s) 208, 531, 586
MaeI CTAG 2 cut(s) 533, 600
MaeII ACGT 2 cut(s) 223, 1258
MaeIII GTNAC 4 cut(s) 1153, 1204, 1432, 1448
MalI GATC 5 cut(s) 531, 563, 926, 987, 1313
MboI GATC 5 cut(s) 529, 561, 924, 985, 1311
MfeI CAATTG 1 cut(s) 302
MflI RGATCY 2 cut(s) 924, 985
MhlI GDGCHC 2 cut(s) 327, 347
MlyI GAGTC 2 cut(s) 1234, 1445
MmeI TCCRAC 1 cut(s) 1384
MroXI GAANNNNTTC 1 cut(s) 696
MseI TTAA 6 cut(s) 312, 585, 708, 1221, 1227, 1352
MslI CAYNNNNRTG 1 cut(s) 806
MspA1I CMGCKG 1 cut(s) 967
MspCI CTTAAG 1 cut(s) 1226
MspR9I CCNGG 4 cut(s) 929, 983, 1053, 1097
MunI CAATTG 1 cut(s) 302
MvaI CCWGG 4 cut(s) 929, 983, 1053, 1097
MwoI GCNNNNNNNGC 1 cut(s) 1396
NcoI CCATGG 1 cut(s) 426
NdeII GATC 5 cut(s) 529, 561, 924, 985, 1311
NlaIII CATG 6 cut(s) 19, 187, 246, 256, 430, 595
NlaIV GGNNCC 1 cut(s) 1138
NmuCI GTSAC 3 cut(s) 1153, 1204, 1448
NspI RCATGY 2 cut(s) 246, 256
NspV TTCGAA 1 cut(s) 1497
PciI ACATGT 1 cut(s) 252
PdmI GAANNNNTTC 1 cut(s) 696
PfeI GAWTC 2 cut(s) 295, 679
Pfl23II CGTACG 1 cut(s) 1255
PfoI TCCNGGA 2 cut(s) 927, 981
PkrI GCNGC 2 cut(s) 966, 1482
PleI GAGTC 2 cut(s) 1234, 1445
PpsI GAGTC 2 cut(s) 1234, 1445
Ppu21I YACGTR 2 cut(s) 224, 1259
PscI ACATGT 1 cut(s) 252
PshAI GACNNNNGTC 1 cut(s) 1211
PsiI TTATAA 3 cut(s) 378, 518, 914
Psp6I CCWGG 4 cut(s) 927, 981, 1051, 1095
PspGI CCWGG 4 cut(s) 927, 981, 1051, 1095
PspLI CGTACG 1 cut(s) 1255
PspN4I GGNNCC 1 cut(s) 1138
PspPI GGNCC 3 cut(s) 1136, 1280, 1320
PstI CTGCAG 1 cut(s) 481
PsuI RGATCY 2 cut(s) 924, 985
PvuII CAGCTG 1 cut(s) 967
RsaI GTAC 5 cut(s) 335, 604, 971, 1257, 1368
RsaNI GTAC 5 cut(s) 334, 603, 970, 1256, 1367
RseI CAYNNNNRTG 1 cut(s) 806
SaqAI TTAA 6 cut(s) 312, 585, 708, 1221, 1227, 1352
SatI GCNGC 2 cut(s) 965, 1481
Sau3AI GATC 5 cut(s) 529, 561, 924, 985, 1311
Sau96I GGNCC 3 cut(s) 1136, 1280, 1320
ScaI AGTACT 2 cut(s) 335, 604
SchI GAGTC 2 cut(s) 1234, 1445
ScrFI CCNGG 4 cut(s) 929, 983, 1053, 1097
SduI GDGCHC 2 cut(s) 327, 347
SfaNI GCATC 3 cut(s) 208, 531, 586
SfcI CTRYAG 1 cut(s) 477
SfuI TTCGAA 1 cut(s) 1497
SinI GGWCC 2 cut(s) 1136, 1280
SmiMI CAYNNNNRTG 1 cut(s) 806
SmlI CTYRAG 2 cut(s) 724, 1226
SmoI CTYRAG 2 cut(s) 724, 1226
SsiI CCGC 1 cut(s) 52
SspI AATATT 1 cut(s) 214
SspMI CTAG 2 cut(s) 533, 600
StyD4I CCNGG 4 cut(s) 927, 981, 1051, 1095
StyI CCWWGG 1 cut(s) 426
TaaI ACNGT 6 cut(s) 333, 374, 772, 898, 1073, 1213
TaiI ACGT 2 cut(s) 226, 1261
TaqI TCGA 2 cut(s) 1106, 1497
TaqII GACCGA 1 cut(s) 1297
TatI WGTACW 3 cut(s) 333, 602, 969
TfiI GAWTC 2 cut(s) 295, 679
Tru1I TTAA 6 cut(s) 312, 585, 708, 1221, 1227, 1352
Tru9I TTAA 6 cut(s) 312, 585, 708, 1221, 1227, 1352
TscAI CASTG 6 cut(s) 45, 174, 277, 456, 1209, 1381
TseFI GTSAC 3 cut(s) 1153, 1204, 1448
TseI GCWGC 2 cut(s) 964, 1480
Tsp45I GTSAC 3 cut(s) 1153, 1204, 1448
TspDTI ATGAA 9 cut(s) 32, 61, 150, 200, 275, 747, 800, 1011, 1376
TspRI CASTG 6 cut(s) 45, 174, 277, 456, 1209, 1381
Vha464I CTTAAG 1 cut(s) 1226
VpaK11BI GGWCC 2 cut(s) 1136, 1280
XapI RAATTY 3 cut(s) 998, 1026, 1493
XbaI TCTAGA 1 cut(s) 532
XceI RCATGY 2 cut(s) 246, 256
XmnI GAANNNNTTC 1 cut(s) 696
XspI CTAG 2 cut(s) 533, 600
ZrmI AGTACT 2 cut(s) 335, 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.