Rorug05G0389000

Protein of unknown function (DUF674)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000148
Physical Location & Seq
Forward (+)
52936291 .. 52938483
2193 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0389000.1

Sequence Viewer

Length: 1491 bp
ATGGCTCATAAAGCTATGGCGCGCCTGGGTGCGGTTTTGGTCATTCTGTTGATTGCTTTTGTTGTAGCTGAGGGATCTCCTAAACCAAAGGCTAAGAAAGTCAAGTGCCACGACAAGAAGTTCTACAAGTGTTACCATAAAGATCTCTACTGCCCAGCAGCATGCCTCCGCACTTGTGTTGTGGATTGTAAGAAATGCAAAGCTGTTTGTAAGGCGCCGCCTCCACCACCACCACCTCCTCCACCGCCGCCACCCAGACGAAAGTGGCGCTACCCACCCCCTCCTCCCCCAAAGAGTTATCACCACTCACCGCCTCCTCCTCCCAAGACTTATCCTTCACCACCACCTGCCCCTTCAGTTGTTCCTACTCCCCCTCCTCCAGCTACAACTCCACCTCCGTCACCCCCTATCTCTACCCCGTCGTCACAACCGATGCCTCCTGCTACTACCCCATCAGCACCGCCATCCCCTATTCCTACTCCATCACCACCTTTGTCCACACCATCATCACCGCCACCCCCTACTCCTACTCCTACTCCATCACCACCGCTGCCCCCTACTTCTACACCACCTTCTTTCTATCCTCCACCACCGCCTTCATCAGAGGCCGCGGGTGAAAAGAGAGTCAAATGCAAGAATAAAAACTACCCTCATTGCTATGGTCTGGAGCTAAGTTGTCCTAGTGGGTGCCCTGAGCAATGTGAAGTTGACTGCGTCACATGCAGTCCCGTTTGTAACTGCAACAAACCAGGTGCTGTTTGCCAAGACCCTAGATTTATTGGTGGTGATGGTATAACCTTCTACTTCCATGGCAAGCGAGACCAAGACTTCTGTCTCGTATCTGATTCCAACATCCACATCAACGCCCATTTCATCGGAAAAAGAGACCAAAATATGAAGAGGGACTTCACTTGGGTCCAATCTCTAGGTATCCTCTTTGACAATCGCAAGCTCTTCATAGGTGCCAAACCAACCTCCACTTGGGATGACACCGTCGACCGCCTAACCCTAGCCATTGACGACGAAACCATTAGCCTTGCCGACAACGAAGGAGCATATTGGCAATCACAAGGACTCAAGATCACAAGGAGCAAGAACACAAATGCTGTAGAAATTGAAGCCGAAGGGAATTTCAAGATCAAAGCAGTGGTGGTGCCGATAACGGAGAAAGAGTCGGTGATACACAAGTATGGGATTACACAGGAGGATTGTTTTGCTCACCTTGACTTGAGCTTCAAGTTTTATGCCCTAAGTGGGGAAGTTAATGGCGTGCTAGGACAGACATACGGTGAGAACTATGTTACTAGGGTCAAGATGGGTGTCGTGATGCCTGTTTTGGGTGGCGATAGAGAATTTTCATCGTCTAGCATCTTTGCCTCGGATTGTGCTGTTGCTAGGTTTAGCGGTGAGTCTAGTGAAAAGTCCAAGTATGCTAGTACTATGAATTGCGCTAGTGGGATGGATGGCCGTGGAGTTGTTTGTAAGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

496

Amino Acids

53.64

Weight (kDa)

8.85

Isoelectric Point (pI)

67.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Root_cap PF06830 411 - 467 1.2e-26 Root cap
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 355
Acc36I ACCTGC 1 cut(s) 355
AccB1I GGYRCC 4 cut(s) 214, 687, 962, 1153
AccI GTMKAC 1 cut(s) 996
AccII CGCG 2 cut(s) 22, 611
AclWI GGATC 1 cut(s) 82
AcoI YGGCCR 1 cut(s) 1465
AcsI RAATTY 2 cut(s) 1129, 1352
AcuI CTGAAG 1 cut(s) 339
AcyI GRCGYC 1 cut(s) 215
AfaI GTAC 1 cut(s) 1438
AfiI CCNNNNNNNGG 5 cut(s) 31, 981, 1254, 1255, 1337
AgsI TTSAA 3 cut(s) 1118, 1135, 1237
AjnI CCWGG 2 cut(s) 24, 748
AluBI AGCT 7 cut(s) 14, 68, 203, 383, 670, 952, 1233
AluI AGCT 7 cut(s) 14, 68, 203, 383, 670, 952, 1233
Alw26I GTCTC 3 cut(s) 813, 839, 879
AlwI GGATC 1 cut(s) 82
AlwNI CAGNNNCTG 1 cut(s) 755
AoxI GGCC 2 cut(s) 606, 1465
ApeKI GCWGC 2 cut(s) 158, 550
ApoI RAATTY 2 cut(s) 1129, 1352
AscI GGCGCGCC 1 cut(s) 20
AspLEI GCGC 5 cut(s) 22, 24, 217, 270, 1451
AspS9I GGNCC 1 cut(s) 916
AvaII GGWCC 1 cut(s) 916
BaeGI GKGCMC 1 cut(s) 692
BaeI ACNNNNGTAYC 2 cut(s) 1172, 1205
BanI GGYRCC 4 cut(s) 214, 687, 962, 1153
BbvCI CCTCAGC 1 cut(s) 69
BbvI GCAGC 2 cut(s) 170, 537
BccI CCATC 9 cut(s) 460, 472, 490, 511, 547, 782, 1309, 1453, 1457
BceAI ACGGC 1 cut(s) 1452
BciT130I CCWGG 2 cut(s) 26, 750
BciVI GTATCC 1 cut(s) 941
BcoDI GTCTC 3 cut(s) 813, 839, 879
BfmI CTRYAG 1 cut(s) 1107
BfoI RGCGCY 2 cut(s) 218, 271
BfuAI ACCTGC 1 cut(s) 355
BfuI GTATCC 1 cut(s) 941
BglII AGATCT 1 cut(s) 142
BisI GCNGC 5 cut(s) 159, 218, 248, 551, 609
BlsI GCNGC 5 cut(s) 160, 219, 249, 552, 610
BmcAI AGTACT 1 cut(s) 1438
Bme1390I CCNGG 2 cut(s) 26, 750
Bme18I GGWCC 1 cut(s) 916
BmgT120I GGNCC 1 cut(s) 916
BmiI GGNNCC 5 cut(s) 216, 689, 917, 964, 1155
BmrFI CCNGG 2 cut(s) 26, 750
BmsI GCATC 3 cut(s) 423, 1317, 1377
BoxI GACNNNNGTC 1 cut(s) 831
BpmI CTGGAG 2 cut(s) 363, 686
Bpu10I CCTNAGC 2 cut(s) 69, 693
BpuEI CTTGAG 2 cut(s) 1061, 1249
BsaHI GRCGYC 1 cut(s) 215
BsaI GGTCTC 2 cut(s) 813, 879
BsaJI CCNNGG 5 cut(s) 25, 609, 808, 1377, 1468
Bsc4I CCNNNNNNNGG 5 cut(s) 31, 981, 1254, 1255, 1337
Bse3DI GCAATG 2 cut(s) 652, 704
BseBI CCWGG 2 cut(s) 26, 750
BseDI CCNNGG 5 cut(s) 25, 609, 808, 1377, 1468
BseGI GGATG 5 cut(s) 464, 852, 991, 1464, 1468
BseLI CCNNNNNNNGG 5 cut(s) 31, 981, 1254, 1255, 1337
BseMI GCAATG 2 cut(s) 652, 704
BseMII CTCAG 2 cut(s) 60, 684
BsePI GCGCGC 1 cut(s) 20
BseRI GAGGAG 5 cut(s) 228, 273, 306, 309, 366
BseSI GKGCMC 1 cut(s) 692
BseXI GCAGC 2 cut(s) 170, 537
BseYI CCCAGC 1 cut(s) 154
Bsh1236I CGCG 2 cut(s) 22, 611
Bsh1285I CGRYCG 1 cut(s) 1000
BshFI GGCC 2 cut(s) 608, 1467
BshNI GGYRCC 4 cut(s) 214, 687, 962, 1153
BsiEI CGRYCG 1 cut(s) 1000
BslFI GGGAC 2 cut(s) 711, 917
BslI CCNNNNNNNGG 5 cut(s) 31, 981, 1254, 1255, 1337
BsmAI GTCTC 3 cut(s) 813, 839, 879
BsmFI GGGAC 2 cut(s) 711, 917
BsnI GGCC 2 cut(s) 608, 1467
Bso31I GGTCTC 2 cut(s) 813, 879
Bsp1286I GDGCHC 1 cut(s) 692
Bsp143I GATC 4 cut(s) 74, 142, 1080, 1137
Bsp19I CCATGG 1 cut(s) 808
BspANI GGCC 2 cut(s) 608, 1467
BspCNI CTCAG 2 cut(s) 61, 685
BspFNI CGCG 2 cut(s) 22, 611
BspLI GGNNCC 5 cut(s) 216, 689, 917, 964, 1155
BspMI ACCTGC 1 cut(s) 355
BspPI GGATC 1 cut(s) 82
BspQI GCTCTTC 1 cut(s) 959
BspT107I GGYRCC 4 cut(s) 214, 687, 962, 1153
BspTNI GGTCTC 2 cut(s) 813, 879
BsrDI GCAATG 2 cut(s) 652, 704
BssECI CCNNGG 5 cut(s) 25, 609, 808, 1377, 1468
BssHII GCGCGC 1 cut(s) 20
BssMI GATC 4 cut(s) 74, 142, 1080, 1137
BssNI GRCGYC 1 cut(s) 215
BssT1I CCWWGG 1 cut(s) 808
Bst2UI CCWGG 2 cut(s) 26, 750
Bst4CI ACNGT 2 cut(s) 994, 1289
Bst6I CTCTTC 2 cut(s) 893, 959
BstACI GRCGYC 1 cut(s) 215
BstC8I GCNNGC 5 cut(s) 22, 163, 815, 950, 1271
BstDEI CTNAG 5 cut(s) 69, 93, 671, 693, 1250
BstDSI CCRYGG 3 cut(s) 609, 808, 1468
BstF5I GGATG 5 cut(s) 464, 852, 991, 1464, 1468
BstFNI CGCG 2 cut(s) 22, 611
BstH2I RGCGCY 2 cut(s) 218, 271
BstHHI GCGC 5 cut(s) 22, 24, 217, 270, 1451
BstKTI GATC 4 cut(s) 77, 145, 1083, 1140
BstMAI GTCTC 3 cut(s) 813, 839, 879
BstMBI GATC 4 cut(s) 74, 142, 1080, 1137
BstMCI CGRYCG 1 cut(s) 1000
BstMWI GCNNNNNNNGC 2 cut(s) 11, 720
BstNI CCWGG 2 cut(s) 26, 750
BstNSI RCATGY 2 cut(s) 165, 723
BstPAI GACNNNNGTC 1 cut(s) 831
BstSCI CCNGG 2 cut(s) 24, 748
BstSFI CTRYAG 1 cut(s) 1107
BstSLI GKGCMC 1 cut(s) 692
BstUI CGCG 2 cut(s) 22, 611
BstV1I GCAGC 2 cut(s) 170, 537
BstX2I RGATCY 2 cut(s) 74, 142
BstYI RGATCY 2 cut(s) 74, 142
BsuI GTATCC 1 cut(s) 941
BsuRI GGCC 2 cut(s) 608, 1467
BtgI CCRYGG 3 cut(s) 609, 808, 1468
BtsCI GGATG 5 cut(s) 464, 852, 991, 1464, 1468
BtsI GCAGTG 1 cut(s) 1152
BtsIMutI CAGTG 1 cut(s) 1152
BveI ACCTGC 1 cut(s) 355
Cac8I GCNNGC 5 cut(s) 22, 163, 815, 950, 1271
CaiI CAGNNNCTG 1 cut(s) 755
CfoI GCGC 5 cut(s) 22, 24, 217, 270, 1451
Cfr13I GGNCC 1 cut(s) 916
Cfr42I CCGCGG 1 cut(s) 612
CseI GACGC 1 cut(s) 703
CsiI ACCWGGT 1 cut(s) 748
Csp6I GTAC 1 cut(s) 1437
CviAII CATG 3 cut(s) 162, 720, 809
CviQI GTAC 1 cut(s) 1437
DdeI CTNAG 5 cut(s) 69, 93, 671, 693, 1250
DinI GGCGCC 1 cut(s) 216
DpnI GATC 4 cut(s) 76, 144, 1082, 1139
DpnII GATC 4 cut(s) 74, 142, 1080, 1137
EaeI YGGCCR 1 cut(s) 1465
Eam1104I CTCTTC 2 cut(s) 893, 959
EarI CTCTTC 2 cut(s) 893, 959
Eco130I CCWWGG 1 cut(s) 808
Eco31I GGTCTC 2 cut(s) 813, 879
Eco47I GGWCC 1 cut(s) 916
Eco57I CTGAAG 1 cut(s) 339
EcoRII CCWGG 2 cut(s) 24, 748
EcoT14I CCWWGG 1 cut(s) 808
EgeI GGCGCC 1 cut(s) 216
EheI GGCGCC 1 cut(s) 216
ErhI CCWWGG 1 cut(s) 808
FaeI CATG 3 cut(s) 165, 723, 812
FalI AAGNNNNNCTT 2 cut(s) 890, 922
FaqI GGGAC 2 cut(s) 711, 917
FatI CATG 3 cut(s) 161, 719, 808
FauI CCCGC 1 cut(s) 604
FblI GTMKAC 1 cut(s) 996
Fnu4HI GCNGC 5 cut(s) 159, 218, 248, 551, 609
FokI GGATG 5 cut(s) 451, 839, 998, 1471, 1475
Fsp4HI GCNGC 5 cut(s) 159, 218, 248, 551, 609
GlaI GCGC 5 cut(s) 21, 23, 216, 269, 1450
GluI GCNGC 5 cut(s) 159, 218, 248, 551, 609
GsaI CCCAGC 1 cut(s) 158
GsuI CTGGAG 2 cut(s) 363, 686
HaeII RGCGCY 2 cut(s) 218, 271
HaeIII GGCC 2 cut(s) 608, 1467
HgaI GACGC 1 cut(s) 703
HhaI GCGC 5 cut(s) 22, 24, 217, 270, 1451
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 3 cut(s) 165, 723, 812
Hin6I GCGC 5 cut(s) 20, 22, 215, 268, 1449
HinP1I GCGC 5 cut(s) 20, 22, 215, 268, 1449
HincII GTYRAC 2 cut(s) 709, 997
HindII GTYRAC 2 cut(s) 709, 997
HinfI GANTC 5 cut(s) 624, 845, 1074, 1172, 1409
Hpy166II GTNNAC 3 cut(s) 498, 709, 997
Hpy188I TCNGA 4 cut(s) 604, 844, 878, 1381
Hpy188III TCNNGA 5 cut(s) 665, 1078, 1135, 1312, 1324
Hpy8I GTNNAC 3 cut(s) 498, 709, 997
Hpy99I CGWCG 3 cut(s) 424, 998, 1025
HpyAV CCTTC 7 cut(s) 345, 363, 582, 606, 808, 1043, 1118
HpyCH4III ACNGT 2 cut(s) 994, 1289
HpyCH4V TGCA 4 cut(s) 198, 633, 723, 741
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 720
HpyF3I CTNAG 5 cut(s) 69, 93, 671, 693, 1250
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 3 cut(s) 165, 723, 812
HspAI GCGC 5 cut(s) 20, 22, 215, 268, 1449
KasI GGCGCC 1 cut(s) 214
KspI CCGCGG 1 cut(s) 612
Kzo9I GATC 4 cut(s) 74, 142, 1080, 1137
LguI GCTCTTC 1 cut(s) 959
LmnI GCTCC 3 cut(s) 667, 1052, 1089
Lsp1109I GCAGC 2 cut(s) 170, 537
LweI GCATC 3 cut(s) 423, 1317, 1377
MabI ACCWGGT 1 cut(s) 748
MaeIII GTNAC 6 cut(s) 131, 399, 423, 715, 734, 1300
MalI GATC 4 cut(s) 76, 144, 1082, 1139
MboI GATC 4 cut(s) 74, 142, 1080, 1137
MboII GAAGA 2 cut(s) 910, 946
MflI RGATCY 2 cut(s) 74, 142
MhlI GDGCHC 1 cut(s) 692
MluCI AATT 4 cut(s) 1113, 1129, 1352, 1444
Mly113I GGCGCC 1 cut(s) 215
MlyI GAGTC 4 cut(s) 633, 1068, 1181, 1418
MmeI TCCRAC 1 cut(s) 873
MseI TTAA 1 cut(s) 1263
MslI CAYNNNNRTG 2 cut(s) 657, 1188
MspA1I CMGCKG 2 cut(s) 550, 611
MspR9I CCNGG 2 cut(s) 26, 750
MvaI CCWGG 2 cut(s) 26, 750
MvnI CGCG 2 cut(s) 22, 611
MwoI GCNNNNNNNGC 2 cut(s) 11, 720
NarI GGCGCC 1 cut(s) 215
NcoI CCATGG 1 cut(s) 808
NdeII GATC 4 cut(s) 74, 142, 1080, 1137
NlaIII CATG 3 cut(s) 165, 723, 812
NlaIV GGNNCC 5 cut(s) 216, 689, 917, 964, 1155
NmuCI GTSAC 3 cut(s) 399, 423, 715
NspI RCATGY 2 cut(s) 165, 723
PaeI GCATGC 1 cut(s) 165
PalAI GGCGCGCC 1 cut(s) 20
PaqCI CACCTGC 1 cut(s) 355
PauI GCGCGC 1 cut(s) 20
PciSI GCTCTTC 1 cut(s) 959
PcsI WCGNNNNNNNCGW 1 cut(s) 428
PfeI GAWTC 1 cut(s) 845
PflFI GACNNNGTC 2 cut(s) 713, 992
PkrI GCNGC 5 cut(s) 160, 219, 249, 552, 610
PleI GAGTC 4 cut(s) 632, 1068, 1180, 1417
PluTI GGCGCC 1 cut(s) 218
PpsI GAGTC 4 cut(s) 632, 1068, 1180, 1417
PshAI GACNNNNGTC 1 cut(s) 831
Psp6I CCWGG 2 cut(s) 24, 748
PspFI CCCAGC 1 cut(s) 154
PspGI CCWGG 2 cut(s) 24, 748
PspN4I GGNNCC 5 cut(s) 216, 689, 917, 964, 1155
PspPI GGNCC 1 cut(s) 916
PstNI CAGNNNCTG 1 cut(s) 755
PsuI RGATCY 2 cut(s) 74, 142
PsyI GACNNNGTC 2 cut(s) 713, 992
PteI GCGCGC 1 cut(s) 20
RsaI GTAC 1 cut(s) 1438
RsaNI GTAC 1 cut(s) 1437
RseI CAYNNNNRTG 2 cut(s) 657, 1188
SacII CCGCGG 1 cut(s) 612
SalI GTCGAC 1 cut(s) 995
SapI GCTCTTC 1 cut(s) 959
SaqAI TTAA 1 cut(s) 1263
SatI GCNGC 5 cut(s) 159, 218, 248, 551, 609
Sau3AI GATC 4 cut(s) 74, 142, 1080, 1137
Sau96I GGNCC 1 cut(s) 916
ScaI AGTACT 1 cut(s) 1438
SchI GAGTC 4 cut(s) 633, 1068, 1181, 1418
ScrFI CCNGG 2 cut(s) 26, 750
SduI GDGCHC 1 cut(s) 692
SexAI ACCWGGT 1 cut(s) 748
SfaNI GCATC 3 cut(s) 423, 1317, 1377
SfcI CTRYAG 1 cut(s) 1107
SfoI GGCGCC 1 cut(s) 216
Sfr303I CCGCGG 1 cut(s) 612
SgrBI CCGCGG 1 cut(s) 612
SgsI GGCGCGCC 1 cut(s) 20
SinI GGWCC 1 cut(s) 916
SmiMI CAYNNNNRTG 2 cut(s) 657, 1188
SmlI CTYRAG 2 cut(s) 1076, 1228
SmoI CTYRAG 2 cut(s) 1076, 1228
SphI GCATGC 1 cut(s) 165
Sse9I AATT 4 cut(s) 1113, 1129, 1352, 1444
SspDI GGCGCC 1 cut(s) 214
StyD4I CCNGG 2 cut(s) 24, 748
StyI CCWWGG 1 cut(s) 808
TaaI ACNGT 2 cut(s) 994, 1289
TaqI TCGA 1 cut(s) 996
TasI AATT 4 cut(s) 1113, 1129, 1352, 1444
TatI WGTACW 1 cut(s) 1436
TauI GCSGC 3 cut(s) 220, 250, 611
TfiI GAWTC 1 cut(s) 845
Tru1I TTAA 1 cut(s) 1263
Tru9I TTAA 1 cut(s) 1263
TscAI CASTG 1 cut(s) 1152
TseFI GTSAC 3 cut(s) 399, 423, 715
TseI GCWGC 2 cut(s) 158, 550
Tsp45I GTSAC 3 cut(s) 399, 423, 715
TspDTI ATGAA 6 cut(s) 588, 862, 911, 946, 1347, 1457
TspGWI ACGGA 2 cut(s) 387, 1178
TspRI CASTG 1 cut(s) 1152
Tth111I GACNNNGTC 2 cut(s) 713, 992
VpaK11BI GGWCC 1 cut(s) 916
XapI RAATTY 2 cut(s) 1129, 1352
XceI RCATGY 2 cut(s) 165, 723
XcmI CCANNNNNNNNNTGG 1 cut(s) 978
XmiI GTMKAC 1 cut(s) 996
ZrmI AGTACT 1 cut(s) 1438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.