RchiOBHm_Chr5g0067521

BEST Arabidopsis thaliana protein match is Protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000148
Physical Location & Seq
Forward (+)
73659291 .. 73663023
3733 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34321

Sequence Viewer

Length: 1506 bp
ATGGCCAATACATCTATCAACAGCATTAGCTTGAAAGCCATGGTGGACAAAGCGAGCAACCAAATTATCTTCGTAGAGTCTGACAATGATTTCATTGATGTTATCTTTAGTTTCTTAACAATACCCATGGGAAAAATTATCAGGTTGACCCCTAATCAATCAATACGATTGGGCGTAGGTTGCTTGAATAATGTGTATGCAAGTGTTAAGAATATGGATCTGAAGCATTTCCGTACTGAAGCATGTAAAGACATGTTGCTATCTCCCCGGAGTGCGGCTGAATCTCAATGCAAGAACCTCAAAGTGAAGATTTACAATGATGAGGCTACACAGTACTTTATGTGCTCACTTAACATAGCCAATTGCAAGTTTAGTTATTGCAAAGATTTAAATTGTGATAGTTGTGGAGTAAAAATAAATATGGAGAAAAATCTTCTAGTGACTCCAGATGGAGGTGTGTTTGTGAAAGGACTATCCAGACTCATAATTACTGATGATTTACAAGTGATTCCACCATTAACTGCAGCAAGCCTTCCTCTACTTACAAAGCTTGGAGTCATGGATGTGAATACTATGGAGGAGGTGACCATCAATGTAGGAGTTGATGAGGTTTTGAATTTGCTTATGCGGTCATTAGCATCGAAGACACCTTTGACAGAATCTCTGCTGAAGAATAAACCAAGACGAAAATTTTGCAATGAATATCAAGGAATAAATACCGAACCCCAAATGGTAAAAGACAAAACGAATCTGGAAGGAACCATTTCTGTCAAGCTTATAGTGAGCAAATCAAAGAAGATGGTTTGTTACGCAGAAGCAGGGGAGGATTTTGTTAATTTGCTCTTAAGTTTCTTAACTATTCCGCTGGGGTTTATTGTTAAACACATGGGGAATCGCTCATTACAAGGATGCATTGATCAGTTGTACAAGAGTGTCCAGGATCTTGATGATCAATATATGATGTCAAGCTACCACAAAGAAATGCTACTCACTCCTAAACTTGTCCCTGGTTTTTGCTATGAGAACCATCTTTTAGGAACTGAGGAAGCCACATATTATTATGCTGGTTCAACAGGTTTTCTGTCTACTGATAGAGTCCTTCTTGCTACTCAAACTGCACTTGCTCCTAAATCTATCAGTCCATTCGCTCCCAGTGCATTCGGCCGTCAAGAAAGTGCTCAAACTTCAATAAGGCCAATTGCTTTTAGGGATCCCAAAGCCAACCATCACCAACATAAAAATGCTCAAGTTCAAGGGTTTTTAGAAGGACCGGCAATGTTCACAGTGACTGATGATCTGAACATAAGACCTGTATCTCTAATCTATGGCCTGTCTCTTCTAAATGAATTGAAGGTACCTTTGACTGACATTTATGTGCAAACCGTGCAGGTGCACGAAGAGGAGGCTTTGCGTCTTTTGGTAGCTGCTTTTCTTGGCGACTCGGCTCTAACCATTACCTTCATCAGGGAGTCAGAGCAAGACAAAAGGTTAAATCAAGAACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

501

Amino Acids

55.83

Weight (kDa)

6.29

Isoelectric Point (pI)

35.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 8 - 466 2e-127 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1378
Acc36I ACCTGC 1 cut(s) 1378
Acc65I GGTACC 1 cut(s) 1354
AccB1I GGYRCC 1 cut(s) 1354
AccI GTMKAC 1 cut(s) 1085
AciI CCGC 3 cut(s) 275, 628, 863
AclWI GGATC 4 cut(s) 225, 948, 1205, 1218
AcoI YGGCCR 2 cut(s) 3, 1162
AcsI RAATTY 2 cut(s) 616, 689
AcuI CTGAAG 3 cut(s) 242, 258, 689
AfaI GTAC 4 cut(s) 235, 335, 926, 1356
AfiI CCNNNNNNNGG 3 cut(s) 274, 452, 1464
AflII CTTAAG 1 cut(s) 844
AflIII ACRYGT 1 cut(s) 252
AgsI TTSAA 7 cut(s) 34, 187, 616, 1071, 1188, 1253, 1351
AjnI CCWGG 2 cut(s) 936, 1006
AluBI AGCT 5 cut(s) 30, 550, 775, 969, 1424
AluI AGCT 5 cut(s) 30, 550, 775, 969, 1424
Alw21I GWGCWC 3 cut(s) 347, 1180, 1395
Alw26I GTCTC 1 cut(s) 1338
Alw44I GTGCAC 1 cut(s) 1391
AlwI GGATC 4 cut(s) 225, 948, 1205, 1218
AlwNI CAGNNNCTG 1 cut(s) 1289
AoxI GGCC 4 cut(s) 3, 1162, 1193, 1327
ApaLI GTGCAC 1 cut(s) 1391
ApeKI GCWGC 2 cut(s) 524, 1424
ApoI RAATTY 2 cut(s) 616, 689
ArsI GACNNNNNNTTYG 2 cut(s) 675, 707
Asp700I GAANNNNTTC 2 cut(s) 227, 763
Asp718I GGTACC 1 cut(s) 1354
AspS9I GGNCC 1 cut(s) 1268
AsuC2I CCSGG 1 cut(s) 268
AsuHPI GGTGA 2 cut(s) 595, 1220
AvaII GGWCC 1 cut(s) 1268
BaeGI GKGCMC 1 cut(s) 1395
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1210
BanI GGYRCC 1 cut(s) 1354
BbsI GAAGAC 1 cut(s) 650
Bbv12I GWGCWC 3 cut(s) 347, 1180, 1395
BbvI GCAGC 2 cut(s) 536, 1411
BccI CCATC 5 cut(s) 443, 596, 793, 1035, 1233
BceAI ACGGC 1 cut(s) 1149
BcgI CGANNNNNNTGC 2 cut(s) 675, 709
BciT130I CCWGG 2 cut(s) 938, 1008
BclI TGATCA 2 cut(s) 916, 949
BcnI CCSGG 1 cut(s) 268
BcoDI GTCTC 1 cut(s) 1338
BfaI CTAG 1 cut(s) 437
BfmI CTRYAG 1 cut(s) 522
BfrI CTTAAG 1 cut(s) 844
BfuAI ACCTGC 1 cut(s) 1378
BisI GCNGC 3 cut(s) 276, 525, 1425
BlsI GCNGC 3 cut(s) 277, 526, 1426
BmcAI AGTACT 1 cut(s) 335
Bme1390I CCNGG 3 cut(s) 268, 938, 1008
Bme18I GGWCC 1 cut(s) 1268
BmgT120I GGNCC 1 cut(s) 1268
BmiI GGNNCC 3 cut(s) 760, 1212, 1356
BmrFI CCNGG 3 cut(s) 268, 938, 1008
BmrI ACTGGG 1 cut(s) 1146
BmsI GCATC 2 cut(s) 647, 899
BmuI ACTGGG 1 cut(s) 1146
BpiI GAAGAC 1 cut(s) 650
BpmI CTGGAG 1 cut(s) 429
BpuEI CTTGAG 1 cut(s) 1230
BpuMI CCSGG 1 cut(s) 268
BsaJI CCNNGG 4 cut(s) 39, 126, 266, 1006
Bsc4I CCNNNNNNNGG 3 cut(s) 274, 452, 1464
Bse118I RCCGGY 1 cut(s) 1270
Bse1I ACTGG 1 cut(s) 1152
Bse3DI GCAATG 2 cut(s) 703, 1281
BseBI CCWGG 2 cut(s) 938, 1008
BseDI CCNNGG 4 cut(s) 39, 126, 266, 1006
BseGI GGATG 2 cut(s) 568, 914
BseLI CCNNNNNNNGG 3 cut(s) 274, 452, 1464
BseMI GCAATG 2 cut(s) 703, 1281
BseMII CTCAG 1 cut(s) 1032
BseNI ACTGG 1 cut(s) 1152
BseRI GAGGAG 2 cut(s) 593, 1415
BseSI GKGCMC 1 cut(s) 1395
BseX3I CGGCCG 1 cut(s) 1162
BseXI GCAGC 2 cut(s) 536, 1411
BseYI CCCAGC 1 cut(s) 865
BsgI GTGCAG 2 cut(s) 1101, 1406
Bsh1285I CGRYCG 1 cut(s) 1165
BshFI GGCC 4 cut(s) 5, 1164, 1195, 1329
BshNI GGYRCC 1 cut(s) 1354
BsiEI CGRYCG 1 cut(s) 1165
BsiHKAI GWGCWC 3 cut(s) 347, 1180, 1395
BsiSI CCGG 2 cut(s) 268, 1271
BslFI GGGAC 1 cut(s) 989
BslI CCNNNNNNNGG 3 cut(s) 274, 452, 1464
BsmAI GTCTC 1 cut(s) 1338
BsmFI GGGAC 1 cut(s) 989
BsmI GAATGC 1 cut(s) 1157
BsnI GGCC 4 cut(s) 5, 1164, 1195, 1329
Bsp1286I GDGCHC 3 cut(s) 347, 1180, 1395
Bsp1407I TGTACA 1 cut(s) 924
Bsp143I GATC 6 cut(s) 217, 916, 940, 949, 1210, 1294
Bsp19I CCATGG 2 cut(s) 39, 126
BspACI CCGC 3 cut(s) 275, 628, 863
BspANI GGCC 4 cut(s) 5, 1164, 1195, 1329
BspCNI CTCAG 1 cut(s) 1033
BspLI GGNNCC 3 cut(s) 760, 1212, 1356
BspMAI CTGCAG 1 cut(s) 526
BspMI ACCTGC 1 cut(s) 1378
BspPI GGATC 4 cut(s) 225, 948, 1205, 1218
BspT107I GGYRCC 1 cut(s) 1354
BspTI CTTAAG 1 cut(s) 844
BsrDI GCAATG 2 cut(s) 703, 1281
BsrFI RCCGGY 1 cut(s) 1270
BsrGI TGTACA 1 cut(s) 924
BsrI ACTGG 1 cut(s) 1152
BssAI RCCGGY 1 cut(s) 1270
BssECI CCNNGG 4 cut(s) 39, 126, 266, 1006
BssMI GATC 6 cut(s) 217, 916, 940, 949, 1210, 1294
BssT1I CCWWGG 2 cut(s) 39, 126
Bst2UI CCWGG 2 cut(s) 938, 1008
Bst4CI ACNGT 4 cut(s) 333, 1285, 1384, 1503
Bst6I CTCTTC 2 cut(s) 1341, 1392
BstAFI CTTAAG 1 cut(s) 844
BstAPI GCANNNNNTGC 1 cut(s) 1384
BstAUI TGTACA 1 cut(s) 924
BstC8I GCNNGC 2 cut(s) 55, 529
BstDEI CTNAG 1 cut(s) 1041
BstDSI CCRYGG 2 cut(s) 39, 126
BstEII GGTNACC 1 cut(s) 583
BstENI CCTNNNNNAGG 1 cut(s) 1462
BstF5I GGATG 2 cut(s) 568, 914
BstKTI GATC 6 cut(s) 220, 919, 943, 952, 1213, 1297
BstMAI GTCTC 1 cut(s) 1338
BstMBI GATC 6 cut(s) 217, 916, 940, 949, 1210, 1294
BstMCI CGRYCG 1 cut(s) 1165
BstMWI GCNNNNNNNGC 3 cut(s) 180, 1154, 1384
BstNI CCWGG 2 cut(s) 938, 1008
BstNSI RCATGY 2 cut(s) 246, 256
BstPI GGTNACC 1 cut(s) 583
BstSCI CCNGG 3 cut(s) 266, 936, 1006
BstSFI CTRYAG 1 cut(s) 522
BstSLI GKGCMC 1 cut(s) 1395
BstV1I GCAGC 2 cut(s) 536, 1411
BstV2I GAAGAC 1 cut(s) 650
BstX2I RGATCY 3 cut(s) 217, 940, 1210
BstYI RGATCY 3 cut(s) 217, 940, 1210
BstZI CGGCCG 1 cut(s) 1162
BsuRI GGCC 4 cut(s) 5, 1164, 1195, 1329
BtgI CCRYGG 2 cut(s) 39, 126
BtsCI GGATG 2 cut(s) 568, 914
BtsIMutI CAGTG 2 cut(s) 1159, 1290
BveI ACCTGC 1 cut(s) 1378
Cac8I GCNNGC 2 cut(s) 55, 529
CaiI CAGNNNCTG 1 cut(s) 1289
Cfr10I RCCGGY 1 cut(s) 1270
Cfr13I GGNCC 1 cut(s) 1268
CseI GACGC 1 cut(s) 1400
Csp6I GTAC 4 cut(s) 234, 334, 925, 1355
CviAII CATG 6 cut(s) 40, 127, 243, 253, 559, 886
CviQI GTAC 4 cut(s) 234, 334, 925, 1355
DdeI CTNAG 1 cut(s) 1041
DpnI GATC 6 cut(s) 219, 918, 942, 951, 1212, 1296
DpnII GATC 6 cut(s) 217, 916, 940, 949, 1210, 1294
DraI TTTAAA 1 cut(s) 390
EaeI YGGCCR 2 cut(s) 3, 1162
EagI CGGCCG 1 cut(s) 1162
Eam1104I CTCTTC 2 cut(s) 1341, 1392
EarI CTCTTC 2 cut(s) 1341, 1392
EclXI CGGCCG 1 cut(s) 1162
Eco130I CCWWGG 2 cut(s) 39, 126
Eco47I GGWCC 1 cut(s) 1268
Eco52I CGGCCG 1 cut(s) 1162
Eco57I CTGAAG 3 cut(s) 242, 258, 689
Eco91I GGTNACC 1 cut(s) 583
EcoNI CCTNNNNNAGG 1 cut(s) 1462
EcoO65I GGTNACC 1 cut(s) 583
EcoRII CCWGG 2 cut(s) 936, 1006
EcoT14I CCWWGG 2 cut(s) 39, 126
EcoT22I ATGCAT 1 cut(s) 914
ErhI CCWWGG 2 cut(s) 39, 126
FaeI CATG 6 cut(s) 43, 130, 246, 256, 562, 889
FaqI GGGAC 1 cut(s) 989
FatI CATG 6 cut(s) 39, 126, 242, 252, 558, 885
FbaI TGATCA 2 cut(s) 916, 949
FblI GTMKAC 1 cut(s) 1085
Fnu4HI GCNGC 3 cut(s) 276, 525, 1425
FokI GGATG 2 cut(s) 575, 921
Fsp4HI GCNGC 3 cut(s) 276, 525, 1425
FspBI CTAG 1 cut(s) 437
GluI GCNGC 3 cut(s) 276, 525, 1425
GsaI CCCAGC 1 cut(s) 869
GsuI CTGGAG 1 cut(s) 429
HaeIII GGCC 4 cut(s) 5, 1164, 1195, 1329
HapII CCGG 2 cut(s) 268, 1271
HgaI GACGC 1 cut(s) 1400
Hin1II CATG 6 cut(s) 43, 130, 246, 256, 562, 889
HincII GTYRAC 1 cut(s) 147
HindII GTYRAC 1 cut(s) 147
HindIII AAGCTT 2 cut(s) 548, 773
HpaII CCGG 2 cut(s) 268, 1271
HphI GGTGA 2 cut(s) 595, 1220
Hpy166II GTNNAC 5 cut(s) 46, 147, 1086, 1281, 1393
Hpy188I TCNGA 4 cut(s) 82, 222, 1299, 1474
Hpy188III TCNNGA 6 cut(s) 446, 477, 752, 944, 1169, 1496
Hpy8I GTNNAC 5 cut(s) 46, 147, 1086, 1281, 1393
HpyAV CCTTC 6 cut(s) 542, 749, 1109, 1259, 1345, 1468
HpyCH4III ACNGT 4 cut(s) 333, 1285, 1384, 1503
HpyF10VI GCNNNNNNNGC 3 cut(s) 180, 1154, 1384
HpyF3I CTNAG 1 cut(s) 1041
Hsp92II CATG 6 cut(s) 43, 130, 246, 256, 562, 889
KpnI GGTACC 1 cut(s) 1358
Ksp22I TGATCA 2 cut(s) 916, 949
Kzo9I GATC 6 cut(s) 217, 916, 940, 949, 1210, 1294
LmnI GCTCC 2 cut(s) 1129, 1153
Lsp1109I GCAGC 2 cut(s) 536, 1411
LweI GCATC 2 cut(s) 647, 899
MaeI CTAG 1 cut(s) 437
MaeIII GTNAC 4 cut(s) 439, 583, 806, 1285
MalI GATC 6 cut(s) 219, 918, 942, 951, 1212, 1296
MboI GATC 6 cut(s) 217, 916, 940, 949, 1210, 1294
MboII GAAGA 8 cut(s) 61, 319, 425, 655, 682, 808, 1328, 1409
MfeI CAATTG 2 cut(s) 361, 1197
MflI RGATCY 3 cut(s) 217, 940, 1210
MhlI GDGCHC 3 cut(s) 347, 1180, 1395
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 7 cut(s) 86, 436, 474, 564, 1104, 1433, 1478
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 914
MroXI GAANNNNTTC 2 cut(s) 227, 763
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 3 cut(s) 563, 1239, 1373
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 865
MspCI CTTAAG 1 cut(s) 844
MspI CCGG 2 cut(s) 268, 1271
MspR9I CCNGG 3 cut(s) 268, 938, 1008
MunI CAATTG 2 cut(s) 361, 1197
Mva1269I GAATGC 1 cut(s) 1157
MvaI CCWGG 2 cut(s) 938, 1008
MwoI GCNNNNNNNGC 3 cut(s) 180, 1154, 1384
NciI CCSGG 1 cut(s) 268
NcoI CCATGG 2 cut(s) 39, 126
NdeII GATC 6 cut(s) 217, 916, 940, 949, 1210, 1294
NlaIII CATG 6 cut(s) 43, 130, 246, 256, 562, 889
NlaIV GGNNCC 3 cut(s) 760, 1212, 1356
NmeAIII GCCGAG 1 cut(s) 1421
NmuCI GTSAC 3 cut(s) 439, 583, 1285
NsiI ATGCAT 1 cut(s) 914
NspI RCATGY 2 cut(s) 246, 256
PaqCI CACCTGC 1 cut(s) 1378
PciI ACATGT 1 cut(s) 252
PctI GAATGC 1 cut(s) 1157
PdmI GAANNNNTTC 2 cut(s) 227, 763
PfeI GAWTC 5 cut(s) 281, 508, 659, 748, 892
PfoI TCCNGGA 1 cut(s) 936
PkrI GCNGC 3 cut(s) 277, 526, 1426
PleI GAGTC 7 cut(s) 85, 436, 474, 563, 1103, 1433, 1477
PpsI GAGTC 7 cut(s) 85, 436, 474, 563, 1103, 1433, 1477
PscI ACATGT 1 cut(s) 252
Psp6I CCWGG 2 cut(s) 936, 1006
PspEI GGTNACC 1 cut(s) 583
PspFI CCCAGC 1 cut(s) 865
PspGI CCWGG 2 cut(s) 936, 1006
PspN4I GGNNCC 3 cut(s) 760, 1212, 1356
PspPI GGNCC 1 cut(s) 1268
PstI CTGCAG 1 cut(s) 526
PstNI CAGNNNCTG 1 cut(s) 1289
PsuI RGATCY 3 cut(s) 217, 940, 1210
RsaI GTAC 4 cut(s) 235, 335, 926, 1356
RsaNI GTAC 4 cut(s) 234, 334, 925, 1355
RseI CAYNNNNRTG 3 cut(s) 563, 1239, 1373
SatI GCNGC 3 cut(s) 276, 525, 1425
Sau3AI GATC 6 cut(s) 217, 916, 940, 949, 1210, 1294
Sau96I GGNCC 1 cut(s) 1268
ScaI AGTACT 1 cut(s) 335
SchI GAGTC 7 cut(s) 86, 436, 474, 564, 1104, 1433, 1478
ScrFI CCNGG 3 cut(s) 268, 938, 1008
SduI GDGCHC 3 cut(s) 347, 1180, 1395
SfaNI GCATC 2 cut(s) 647, 899
SfcI CTRYAG 1 cut(s) 522
SinI GGWCC 1 cut(s) 1268
SmiI ATTTAAAT 1 cut(s) 390
SmiMI CAYNNNNRTG 3 cut(s) 563, 1239, 1373
SmlI CTYRAG 2 cut(s) 844, 1245
SmoI CTYRAG 2 cut(s) 844, 1245
SsiI CCGC 3 cut(s) 275, 628, 863
SspMI CTAG 1 cut(s) 437
StyD4I CCNGG 3 cut(s) 266, 936, 1006
StyI CCWWGG 2 cut(s) 39, 126
SwaI ATTTAAAT 1 cut(s) 390
TaaI ACNGT 4 cut(s) 333, 1285, 1384, 1503
TaqI TCGA 1 cut(s) 641
TatI WGTACW 2 cut(s) 333, 924
TauI GCSGC 1 cut(s) 278
TfiI GAWTC 5 cut(s) 281, 508, 659, 748, 892
TscAI CASTG 2 cut(s) 1159, 1290
TseFI GTSAC 3 cut(s) 439, 583, 1285
TseI GCWGC 2 cut(s) 524, 1424
Tsp45I GTSAC 3 cut(s) 439, 583, 1285
TspDTI ATGAA 4 cut(s) 82, 714, 1359, 1450
TspGWI ACGGA 1 cut(s) 221
TspRI CASTG 2 cut(s) 1159, 1290
Vha464I CTTAAG 1 cut(s) 844
VneI GTGCAC 1 cut(s) 1391
VpaK11BI GGWCC 1 cut(s) 1268
XagI CCTNNNNNAGG 1 cut(s) 1462
XapI RAATTY 2 cut(s) 616, 689
XceI RCATGY 2 cut(s) 246, 256
XmiI GTMKAC 1 cut(s) 1085
XmnI GAANNNNTTC 2 cut(s) 227, 763
XspI CTAG 1 cut(s) 437
ZrmI AGTACT 1 cut(s) 335
Zsp2I ATGCAT 1 cut(s) 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.