Prupe.6G064400_v2.0.a1

Protein of unknown function (DUF674)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
4453915 .. 4455203
1289 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G064400.1

Sequence Viewer

Length: 255 bp
ATGTTGTGCGGAAGCGTCAACCAACTATGGCAGTGCTCGAGGATTCTTGAAACGACAGGCATGTTCATGGTAGAGGACAGTCTCATTGGGAGACCAGTATCTCCAATCATTGGTGTGTCTGTTCTGAACCAACTGAGTGTTCCTCTCAATGATATTGAGGTGCAAGTGGTGAATGTGGGCGACCAAGAGGCGTTTCGTCCTTTGGTTGCTTCTTTTGTTACCGACTCTGCTCTAACCAGTGTTTTGCTGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

85

Amino Acids

9.12

Weight (kDa)

4.29

Isoelectric Point (pI)

41.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 110
AciI CCGC 1 cut(s) 9
AfiI CCNNNNNNNGG 1 cut(s) 110
AgsI TTSAA 1 cut(s) 50
AjuI GAANNNNNNNTTGG 4 cut(s) 123, 155, 177, 209
Alw21I GWGCWC 1 cut(s) 38
Alw26I GTCTC 2 cut(s) 85, 86
Ama87I CYCGRG 1 cut(s) 37
AsuHPI GGTGA 1 cut(s) 181
AvaI CYCGRG 1 cut(s) 37
Bbv12I GWGCWC 1 cut(s) 38
BbvCI CCTCAGC 1 cut(s) 248
BcoDI GTCTC 2 cut(s) 85, 86
BmeT110I CYCGRG 1 cut(s) 37
BplI GAGNNNNNCTC 2 cut(s) 127, 159
Bpu10I CCTNAGC 1 cut(s) 248
BsaI GGTCTC 1 cut(s) 85
Bsc4I CCNNNNNNNGG 1 cut(s) 110
Bse1I ACTGG 2 cut(s) 95, 237
BseLI CCNNNNNNNGG 1 cut(s) 110
BseMII CTCAG 2 cut(s) 125, 239
BseNI ACTGG 2 cut(s) 95, 237
BsiHKAI GWGCWC 1 cut(s) 38
BsiHKCI CYCGRG 1 cut(s) 37
BslI CCNNNNNNNGG 1 cut(s) 110
BsmAI GTCTC 2 cut(s) 85, 86
Bso31I GGTCTC 1 cut(s) 85
BsoBI CYCGRG 1 cut(s) 37
Bsp1286I GDGCHC 1 cut(s) 38
BspACI CCGC 1 cut(s) 9
BspCNI CTCAG 2 cut(s) 126, 240
BspTNI GGTCTC 1 cut(s) 85
BsrI ACTGG 2 cut(s) 95, 237
Bst4CI ACNGT 1 cut(s) 80
BstDEI CTNAG 2 cut(s) 134, 248
BstMAI GTCTC 2 cut(s) 85, 86
BstNSI RCATGY 1 cut(s) 64
BtsI GCAGTG 1 cut(s) 38
BtsIMutI CAGTG 2 cut(s) 38, 244
CseI GACGC 1 cut(s) 4
CviAII CATG 2 cut(s) 61, 67
DdeI CTNAG 2 cut(s) 134, 248
Eco31I GGTCTC 1 cut(s) 85
Eco88I CYCGRG 1 cut(s) 37
FaeI CATG 2 cut(s) 64, 70
FaiI YATR 3 cut(s) 28, 62, 68
FatI CATG 2 cut(s) 60, 66
HgaI GACGC 1 cut(s) 4
Hin1II CATG 2 cut(s) 64, 70
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HinfI GANTC 2 cut(s) 43, 224
HphI GGTGA 1 cut(s) 181
Hpy166II GTNNAC 1 cut(s) 19
Hpy188I TCNGA 1 cut(s) 126
Hpy188III TCNNGA 1 cut(s) 47
Hpy8I GTNNAC 1 cut(s) 19
HpyCH4III ACNGT 1 cut(s) 80
HpyCH4V TGCA 1 cut(s) 163
HpyF3I CTNAG 2 cut(s) 134, 248
Hsp92II CATG 2 cut(s) 64, 70
LpnPI CCDG 3 cut(s) 42, 108, 250
MaeIII GTNAC 1 cut(s) 217
MhlI GDGCHC 1 cut(s) 38
MlyI GAGTC 1 cut(s) 218
MnlI CCTC 6 cut(s) 33, 67, 151, 153, 181, 243
MslI CAYNNNNRTG 2 cut(s) 65, 113
NlaIII CATG 2 cut(s) 64, 70
NspI RCATGY 1 cut(s) 64
PaeR7I CTCGAG 1 cut(s) 37
PfeI GAWTC 1 cut(s) 43
PflMI CCANNNNNTGG 1 cut(s) 110
PleI GAGTC 1 cut(s) 218
PpsI GAGTC 1 cut(s) 218
PspXI VCTCGAGB 1 cut(s) 37
RseI CAYNNNNRTG 2 cut(s) 65, 113
SchI GAGTC 1 cut(s) 218
SduI GDGCHC 1 cut(s) 38
SetI ASST 2 cut(s) 162, 254
Sfr274I CTCGAG 1 cut(s) 37
SlaI CTCGAG 1 cut(s) 37
SmiMI CAYNNNNRTG 2 cut(s) 65, 113
SmlI CTYRAG 1 cut(s) 37
SmoI CTYRAG 1 cut(s) 37
SsiI CCGC 1 cut(s) 9
TaaI ACNGT 1 cut(s) 80
TaqI TCGA 1 cut(s) 38
TfiI GAWTC 1 cut(s) 43
TscAI CASTG 2 cut(s) 38, 244
TspDTI ATGAA 1 cut(s) 55
TspRI CASTG 2 cut(s) 38, 244
Van91I CCANNNNNTGG 1 cut(s) 110
XceI RCATGY 1 cut(s) 64
XhoI CTCGAG 1 cut(s) 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.