MD11G1083700.v1.1

Protein of unknown function (DUF674)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000148
Physical Location & Seq
Forward (+)
7072135 .. 7075463
3329 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1083700.v1.1.491

Sequence Viewer

Length: 1086 bp
ATGGGAACTATTGTTAGGCTTTCCCATCATTCCCAATCCTTTGGAATTGGCTGCATTGACAACTTATTTGGAAGTGTTGAGAGTCTTGATTTACAGCTTTTTCGAACTAAAGAATGTCGAGACATGTTGTTACATCCCCGCAATGGAGCTGAAGATCTATTGAGGAACCTCAAATTGAAATATGATCAATTATCTTCTGTAGTTTCGAACCATGGACTCATGGGCTGGAAAAGCGTTGAGGAACTGACTTTTAATGTGGGAGTTGATGAGGTTTTGAATTTGCTTATGCGCTCATTAGTATCAGAGACACCTCTGACTGAAACTCTGCTGAAGGATAAAACCATACCAAACATGATTGATGAAAACCTTGACCAAGATTTATGCATTGAATATCGAGAGGTAGAAGGAAAAAGGAATGAGGAAGAAGAAAAGATTTCTATCAAACTTATAGTTAGCAAATCTAAGAAGAAGGTTTATTATGCCGAAGTGGGGGAGGATTTTGTCAATTTACTCTTCAGTTTCTTGACTCTTCCACTAGGGTTTGTAATAAAACAAATGCAACATAACTCTTTGAAAGGTTGCATTGACCAGCTGTACAAAAGTGTCGAAGATCTTGATGAGCAGTACTTGAAGTCAAATTTACACAAGAAAAAGTTGGTGAGTCCTAAGCTCCTCCCTGGATTTGGCTACAAGAATCATCTTCTGGGAATTGAGGAAGCATCGTATAAATGGACTGACTCCGTAGAACCCAAATCCCATTGTAAAGAAGATTGTATTGACTTCGTAGACCCCAAATCCCATCATAAAAAAGATGATAAAGATTGTGGATTCTTGAAAGGACCGGCGATGTTCATGGTAACTGACAGTCTCAATGTAAGTCCAATATCTGCAATTGTCGGCATGTCAATTCTATGCGAACTGAACGTACCTGTGACTGATGTTGAGGTACGAGTGGCTCATGTGGGGAAAGAGGAGGCTATCCGTCTTTTGGTGGCTTCTTTTGTTTGTCCCTCTGCTCTAACTAGTGTCTTCCTTACGAAGCCAAAGCGATTTGGAGGTTTAGGGTGCCTAAGTTTTCTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

362

Amino Acids

40.66

Weight (kDa)

5.92

Isoelectric Point (pI)

34.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 1 - 64 1.2e-17 Protein of unknown function (DUF674)
DUF674 PF05056 64 - 324 5.6e-63 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1065
AccI GTMKAC 1 cut(s) 786
AciI CCGC 1 cut(s) 139
AcsI RAATTY 2 cut(s) 277, 637
AcuI CTGAAG 3 cut(s) 171, 350, 499
AfaI GTAC 4 cut(s) 596, 626, 927, 948
AfiI CCNNNNNNNGG 4 cut(s) 143, 489, 683, 988
AflIII ACRYGT 1 cut(s) 123
AgsI TTSAA 6 cut(s) 178, 277, 389, 574, 631, 835
AhlI ACTAGT 1 cut(s) 1022
AjnI CCWGG 1 cut(s) 676
AluBI AGCT 4 cut(s) 97, 149, 592, 670
AluI AGCT 4 cut(s) 97, 149, 592, 670
Alw26I GTCTC 3 cut(s) 114, 299, 872
ApeKI GCWGC 1 cut(s) 51
ApoI RAATTY 2 cut(s) 277, 637
ArsI GACNNNNNNTTYG 2 cut(s) 50, 82
AspLEI GCGC 1 cut(s) 291
AspS9I GGNCC 1 cut(s) 839
AsuHPI GGTGA 1 cut(s) 670
AsuII TTCGAA 2 cut(s) 103, 206
AvaII GGWCC 1 cut(s) 839
BanI GGYRCC 1 cut(s) 1065
BbsI GAAGAC 1 cut(s) 1021
BbvI GCAGC 1 cut(s) 38
BccI CCATC 2 cut(s) 33, 807
BciT130I CCWGG 1 cut(s) 678
BclI TGATCA 1 cut(s) 184
BcoDI GTCTC 3 cut(s) 114, 299, 872
BcuI ACTAGT 1 cut(s) 1022
BfaI CTAG 2 cut(s) 536, 1023
BfmI CTRYAG 1 cut(s) 198
BglII AGATCT 2 cut(s) 154, 610
BisI GCNGC 1 cut(s) 52
BlsI GCNGC 1 cut(s) 53
BmcAI AGTACT 1 cut(s) 626
Bme1390I CCNGG 1 cut(s) 678
Bme18I GGWCC 1 cut(s) 839
BmgT120I GGNCC 1 cut(s) 839
BmiI GGNNCC 2 cut(s) 167, 1067
BmrFI CCNGG 1 cut(s) 678
BmsI GCATC 1 cut(s) 728
BpiI GAAGAC 1 cut(s) 1021
Bpu10I CCTNAGC 1 cut(s) 666
Bpu14I TTCGAA 2 cut(s) 103, 206
BsaBI GATNNNNATC 1 cut(s) 437
BsaJI CCNNGG 2 cut(s) 211, 676
Bsc4I CCNNNNNNNGG 4 cut(s) 143, 489, 683, 988
Bse118I RCCGGY 1 cut(s) 841
Bse3DI GCAATG 1 cut(s) 148
Bse8I GATNNNNATC 1 cut(s) 437
BseBI CCWGG 1 cut(s) 678
BseDI CCNNGG 2 cut(s) 211, 676
BseGI GGATG 1 cut(s) 133
BseJI GATNNNNATC 1 cut(s) 437
BseLI CCNNNNNNNGG 4 cut(s) 143, 489, 683, 988
BseMI GCAATG 1 cut(s) 148
BseRI GAGGAG 2 cut(s) 662, 986
BseXI GCAGC 1 cut(s) 38
BshNI GGYRCC 1 cut(s) 1065
BsiSI CCGG 1 cut(s) 842
BslFI GGGAC 1 cut(s) 993
BslI CCNNNNNNNGG 4 cut(s) 143, 489, 683, 988
BsmAI GTCTC 3 cut(s) 114, 299, 872
BsmFI GGGAC 1 cut(s) 993
Bsp119I TTCGAA 2 cut(s) 103, 206
Bsp1407I TGTACA 1 cut(s) 594
Bsp143I GATC 3 cut(s) 154, 184, 610
Bsp19I CCATGG 1 cut(s) 211
BspACI CCGC 1 cut(s) 139
BspLI GGNNCC 2 cut(s) 167, 1067
BspT104I TTCGAA 2 cut(s) 103, 206
BspT107I GGYRCC 1 cut(s) 1065
BsrDI GCAATG 1 cut(s) 148
BsrFI RCCGGY 1 cut(s) 841
BsrGI TGTACA 1 cut(s) 594
BssAI RCCGGY 1 cut(s) 841
BssECI CCNNGG 2 cut(s) 211, 676
BssMI GATC 3 cut(s) 154, 184, 610
BssT1I CCWWGG 1 cut(s) 211
Bst2UI CCWGG 1 cut(s) 678
Bst4CI ACNGT 1 cut(s) 866
Bst6I CTCTTC 2 cut(s) 518, 534
BstAUI TGTACA 1 cut(s) 594
BstBI TTCGAA 2 cut(s) 103, 206
BstDEI CTNAG 3 cut(s) 462, 666, 1070
BstDSI CCRYGG 1 cut(s) 211
BstF5I GGATG 1 cut(s) 133
BstHHI GCGC 1 cut(s) 291
BstKTI GATC 3 cut(s) 157, 187, 613
BstMAI GTCTC 3 cut(s) 114, 299, 872
BstMBI GATC 3 cut(s) 154, 184, 610
BstMWI GCNNNNNNNGC 1 cut(s) 231
BstNI CCWGG 1 cut(s) 678
BstNSI RCATGY 2 cut(s) 127, 904
BstSCI CCNGG 1 cut(s) 676
BstSFI CTRYAG 1 cut(s) 198
BstV1I GCAGC 1 cut(s) 38
BstV2I GAAGAC 1 cut(s) 1021
BstX2I RGATCY 2 cut(s) 154, 610
BstXI CCANNNNNNTGG 1 cut(s) 41
BstYI RGATCY 2 cut(s) 154, 610
BtgI CCRYGG 1 cut(s) 211
BtgZI GCGATG 1 cut(s) 860
BtsCI GGATG 1 cut(s) 133
CfoI GCGC 1 cut(s) 291
Cfr10I RCCGGY 1 cut(s) 841
Cfr13I GGNCC 1 cut(s) 839
Csp6I GTAC 4 cut(s) 595, 625, 926, 947
CviAII CATG 7 cut(s) 124, 212, 220, 352, 853, 901, 959
CviQI GTAC 4 cut(s) 595, 625, 926, 947
DdeI CTNAG 3 cut(s) 462, 666, 1070
DpnI GATC 3 cut(s) 156, 186, 612
DpnII GATC 3 cut(s) 154, 184, 610
Eam1104I CTCTTC 2 cut(s) 518, 534
EarI CTCTTC 2 cut(s) 518, 534
Eco130I CCWWGG 1 cut(s) 211
Eco47I GGWCC 1 cut(s) 839
Eco57I CTGAAG 3 cut(s) 171, 350, 499
EcoRII CCWGG 1 cut(s) 676
EcoT14I CCWWGG 1 cut(s) 211
EcoT22I ATGCAT 1 cut(s) 386
ErhI CCWWGG 1 cut(s) 211
FaeI CATG 7 cut(s) 127, 215, 223, 355, 856, 904, 962
FaqI GGGAC 1 cut(s) 993
FatI CATG 7 cut(s) 123, 211, 219, 351, 852, 900, 958
FauI CCCGC 1 cut(s) 146
FbaI TGATCA 1 cut(s) 184
FblI GTMKAC 1 cut(s) 786
Fnu4HI GCNGC 1 cut(s) 52
FokI GGATG 1 cut(s) 120
Fsp4HI GCNGC 1 cut(s) 52
FspBI CTAG 2 cut(s) 536, 1023
GlaI GCGC 1 cut(s) 290
GluI GCNGC 1 cut(s) 52
HapII CCGG 1 cut(s) 842
HhaI GCGC 1 cut(s) 291
Hin1II CATG 7 cut(s) 127, 215, 223, 355, 856, 904, 962
Hin6I GCGC 1 cut(s) 289
HinP1I GCGC 1 cut(s) 289
HinfI GANTC 7 cut(s) 82, 216, 526, 661, 694, 737, 828
HpaII CCGG 1 cut(s) 842
HphI GGTGA 1 cut(s) 670
Hpy166II GTNNAC 1 cut(s) 787
Hpy188I TCNGA 2 cut(s) 304, 315
Hpy188III TCNNGA 6 cut(s) 86, 119, 395, 523, 614, 832
Hpy8I GTNNAC 1 cut(s) 787
HpyAV CCTTC 3 cut(s) 325, 398, 463
HpyCH4III ACNGT 1 cut(s) 866
HpyCH4IV ACGT 1 cut(s) 924
HpyCH4V TGCA 5 cut(s) 54, 384, 559, 582, 890
HpyF10VI GCNNNNNNNGC 1 cut(s) 231
HpyF3I CTNAG 3 cut(s) 462, 666, 1070
HpySE526I ACGT 1 cut(s) 924
Hsp92II CATG 7 cut(s) 127, 215, 223, 355, 856, 904, 962
HspAI GCGC 1 cut(s) 289
Ksp22I TGATCA 1 cut(s) 184
Kzo9I GATC 3 cut(s) 154, 184, 610
LmnI GCTCC 2 cut(s) 146, 675
LpnPI CCDG 7 cut(s) 211, 602, 663, 689, 690, 855, 942
Lsp1109I GCAGC 1 cut(s) 38
LweI GCATC 1 cut(s) 728
MaeI CTAG 2 cut(s) 536, 1023
MaeII ACGT 1 cut(s) 924
MaeIII GTNAC 3 cut(s) 129, 856, 931
MalI GATC 3 cut(s) 156, 186, 612
MboI GATC 3 cut(s) 154, 184, 610
MfeI CAATTG 1 cut(s) 891
MflI RGATCY 2 cut(s) 154, 610
MlyI GAGTC 5 cut(s) 91, 210, 520, 670, 731
Mph1103I ATGCAT 1 cut(s) 386
MseI TTAA 2 cut(s) 252, 1084
MspA1I CMGCKG 1 cut(s) 592
MspI CCGG 1 cut(s) 842
MspR9I CCNGG 1 cut(s) 678
MunI CAATTG 1 cut(s) 891
MvaI CCWGG 1 cut(s) 678
MwoI GCNNNNNNNGC 1 cut(s) 231
NcoI CCATGG 1 cut(s) 211
NdeII GATC 3 cut(s) 154, 184, 610
NlaIII CATG 7 cut(s) 127, 215, 223, 355, 856, 904, 962
NlaIV GGNNCC 2 cut(s) 167, 1067
NmuCI GTSAC 1 cut(s) 931
NsiI ATGCAT 1 cut(s) 386
NspI RCATGY 2 cut(s) 127, 904
NspV TTCGAA 2 cut(s) 103, 206
PciI ACATGT 1 cut(s) 123
PfeI GAWTC 2 cut(s) 694, 828
PkrI GCNGC 1 cut(s) 53
PleI GAGTC 5 cut(s) 90, 210, 520, 669, 731
PpsI GAGTC 5 cut(s) 90, 210, 520, 669, 731
PscI ACATGT 1 cut(s) 123
Psp6I CCWGG 1 cut(s) 676
PspGI CCWGG 1 cut(s) 676
PspN4I GGNNCC 2 cut(s) 167, 1067
PspPI GGNCC 1 cut(s) 839
PsrI GAACNNNNNNTAC 2 cut(s) 909, 941
PsuI RGATCY 2 cut(s) 154, 610
PvuII CAGCTG 1 cut(s) 592
RsaI GTAC 4 cut(s) 596, 626, 927, 948
RsaNI GTAC 4 cut(s) 595, 625, 926, 947
SaqAI TTAA 2 cut(s) 252, 1084
SatI GCNGC 1 cut(s) 52
Sau3AI GATC 3 cut(s) 154, 184, 610
Sau96I GGNCC 1 cut(s) 839
ScaI AGTACT 1 cut(s) 626
SchI GAGTC 5 cut(s) 91, 210, 520, 670, 731
ScrFI CCNGG 1 cut(s) 678
SfaNI GCATC 1 cut(s) 728
SfcI CTRYAG 1 cut(s) 198
SfuI TTCGAA 2 cut(s) 103, 206
SinI GGWCC 1 cut(s) 839
SpeI ACTAGT 1 cut(s) 1022
SsiI CCGC 1 cut(s) 139
SspMI CTAG 2 cut(s) 536, 1023
StyD4I CCNGG 1 cut(s) 676
StyI CCWWGG 1 cut(s) 211
TaaI ACNGT 1 cut(s) 866
TaiI ACGT 1 cut(s) 927
TaqI TCGA 5 cut(s) 103, 118, 206, 394, 606
TatI WGTACW 2 cut(s) 594, 624
TfiI GAWTC 2 cut(s) 694, 828
Tru1I TTAA 2 cut(s) 252, 1084
Tru9I TTAA 2 cut(s) 252, 1084
TseFI GTSAC 1 cut(s) 931
TseI GCWGC 1 cut(s) 51
Tsp45I GTSAC 1 cut(s) 931
TspDTI ATGAA 2 cut(s) 375, 841
TspGWI ACGGA 2 cut(s) 730, 971
VpaK11BI GGWCC 1 cut(s) 839
XapI RAATTY 2 cut(s) 277, 637
XceI RCATGY 2 cut(s) 127, 904
XmiI GTMKAC 1 cut(s) 786
XspI CTAG 2 cut(s) 536, 1023
ZrmI AGTACT 1 cut(s) 626
Zsp2I ATGCAT 1 cut(s) 386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.