pycom03g06310

Protein of unknown function (DUF674)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
4947613 .. 4948228
616 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g06310.1

Sequence Viewer

Length: 558 bp
ATGACCTCTTTAGTATCAAAAGCACCTTTGATTGAAACCCTTCTAAAGCATAAACAAGAACCAAAACTGAGCAGTAGCATTCCCAATCAAGCAATACCTATTGAATCTCAAATTTTATTTGGTGACACGAAGTGGTATGAACTAGGCAAGGTTTCTGTTAAGCTTGCCATCAGCAAATCAAAGAAGACTGTGTGTTACGCAGAAGCAGGGGAAGATTTTGTTGATTTACTGTTCAATTTCCTATCTCTGCCACTTGCGTTTATAGTGAAAAACATGAAAGAGGGCTCCTTGAACGGTTGCATTGGTCGGAAATGCTGCTCGATCCCAAACTTGTTCCTCGTTTTTGCTTGGATGAGTCTTTTAGGAACTGAGGAGATCTCGTATTCCTATGTGGATGACAAGTTGATTAATAATAGATCCCTTCTGCGTTCTAATTGTTCATCACCGGAGTCATATAAACTCACAGTTGTTAATCCGAAACCCTATTTCAATCAGAATCGAAGTAGTGATCGTGGATCTTTCTACTGCATGTTCTTAAATCTTCTAATGTGCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

186

Amino Acids

20.83

Weight (kDa)

8.79

Isoelectric Point (pI)

42.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 3 - 132 5e-22 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 316, 411, 523
AcsI RAATTY 1 cut(s) 111
AdeI CACNNNGTG 1 cut(s) 132
AgsI TTSAA 5 cut(s) 35, 104, 235, 292, 490
AluBI AGCT 1 cut(s) 163
AluI AGCT 1 cut(s) 163
AlwI GGATC 3 cut(s) 316, 411, 523
ApeKI GCWGC 1 cut(s) 315
ApoI RAATTY 1 cut(s) 111
AseI ATTAAT 1 cut(s) 408
Asp700I GAANNNNTTC 1 cut(s) 39
AsuHPI GGTGA 2 cut(s) 134, 435
BanII GRGCYC 1 cut(s) 287
BbsI GAAGAC 1 cut(s) 191
BbvI GCAGC 1 cut(s) 302
BccI CCATC 1 cut(s) 176
BfaI CTAG 1 cut(s) 143
BglII AGATCT 1 cut(s) 375
BisI GCNGC 1 cut(s) 316
BlsI GCNGC 1 cut(s) 317
BmiI GGNNCC 1 cut(s) 286
BpiI GAAGAC 1 cut(s) 191
BplI GAGNNNNNCTC 2 cut(s) 362, 394
BsaWI WCCGGW 1 cut(s) 445
BsaXI ACNNNNNCTCC 2 cut(s) 365, 395
BseGI GGATG 2 cut(s) 357, 400
BseMII CTCAG 2 cut(s) 59, 360
BseRI GAGGAG 1 cut(s) 386
BseXI GCAGC 1 cut(s) 302
BsiSI CCGG 1 cut(s) 446
BsmI GAATGC 1 cut(s) 78
Bsp1286I GDGCHC 1 cut(s) 287
Bsp143I GATC 5 cut(s) 321, 375, 416, 508, 515
BspCNI CTCAG 2 cut(s) 60, 361
BspLI GGNNCC 1 cut(s) 286
BspPI GGATC 3 cut(s) 316, 411, 523
BssMI GATC 5 cut(s) 321, 375, 416, 508, 515
Bst4CI ACNGT 4 cut(s) 190, 231, 296, 466
BstC8I GCNNGC 1 cut(s) 165
BstDEI CTNAG 2 cut(s) 68, 369
BstF5I GGATG 2 cut(s) 357, 400
BstKTI GATC 5 cut(s) 324, 378, 419, 511, 518
BstMBI GATC 5 cut(s) 321, 375, 416, 508, 515
BstNSI RCATGY 1 cut(s) 532
BstV1I GCAGC 1 cut(s) 302
BstV2I GAAGAC 1 cut(s) 191
BstX2I RGATCY 3 cut(s) 375, 416, 515
BstYI RGATCY 3 cut(s) 375, 416, 515
BtsCI GGATG 2 cut(s) 357, 400
Cac8I GCNNGC 1 cut(s) 165
CviAII CATG 2 cut(s) 274, 529
CviJI RGCY 2 cut(s) 163, 285
CviKI_1 RGCY 2 cut(s) 163, 285
DdeI CTNAG 2 cut(s) 68, 369
DpnI GATC 5 cut(s) 323, 377, 418, 510, 517
DpnII GATC 5 cut(s) 321, 375, 416, 508, 515
DraIII CACNNNGTG 1 cut(s) 132
Eco24I GRGCYC 1 cut(s) 287
EcoT38I GRGCYC 1 cut(s) 287
FaeI CATG 2 cut(s) 277, 532
FaiI YATR 8 cut(s) 51, 138, 263, 275, 390, 454, 456, 530
FatI CATG 2 cut(s) 273, 528
Fnu4HI GCNGC 1 cut(s) 316
FokI GGATG 2 cut(s) 364, 407
FriOI GRGCYC 1 cut(s) 287
Fsp4HI GCNGC 1 cut(s) 316
FspBI CTAG 1 cut(s) 143
GluI GCNGC 1 cut(s) 316
HapII CCGG 1 cut(s) 446
Hin1II CATG 2 cut(s) 277, 532
HindIII AAGCTT 1 cut(s) 161
HinfI GANTC 4 cut(s) 104, 355, 449, 496
HpaII CCGG 1 cut(s) 446
HphI GGTGA 2 cut(s) 134, 435
Hpy188I TCNGA 3 cut(s) 309, 477, 495
HpyAV CCTTC 2 cut(s) 50, 431
HpyCH4III ACNGT 4 cut(s) 190, 231, 296, 466
HpyCH4V TGCA 2 cut(s) 300, 528
HpyF3I CTNAG 2 cut(s) 68, 369
Hsp92II CATG 2 cut(s) 277, 532
Kzo9I GATC 5 cut(s) 321, 375, 416, 508, 515
LmnI GCTCC 1 cut(s) 290
LpnPI CCDG 2 cut(s) 192, 459
Lsp1109I GCAGC 1 cut(s) 302
MaeI CTAG 1 cut(s) 143
MaeIII GTNAC 2 cut(s) 122, 194
MalI GATC 5 cut(s) 323, 377, 418, 510, 517
MboI GATC 5 cut(s) 321, 375, 416, 508, 515
MboII GAAGA 3 cut(s) 196, 224, 533
MflI RGATCY 3 cut(s) 375, 416, 515
MhlI GDGCHC 1 cut(s) 287
MluCI AATT 3 cut(s) 111, 235, 433
MlyI GAGTC 2 cut(s) 364, 458
MmeI TCCRAC 1 cut(s) 287
MnlI CCTC 4 cut(s) 16, 274, 347, 364
MroXI GAANNNNTTC 1 cut(s) 39
MseI TTAA 4 cut(s) 159, 408, 471, 536
MspI CCGG 1 cut(s) 446
Mva1269I GAATGC 1 cut(s) 78
NdeII GATC 5 cut(s) 321, 375, 416, 508, 515
NlaIII CATG 2 cut(s) 277, 532
NlaIV GGNNCC 1 cut(s) 286
NmuCI GTSAC 1 cut(s) 122
NspI RCATGY 1 cut(s) 532
PctI GAATGC 1 cut(s) 78
PdmI GAANNNNTTC 1 cut(s) 39
PfeI GAWTC 2 cut(s) 104, 496
PkrI GCNGC 1 cut(s) 317
PleI GAGTC 2 cut(s) 363, 457
PpsI GAGTC 2 cut(s) 363, 457
PshBI ATTAAT 1 cut(s) 408
PspN4I GGNNCC 1 cut(s) 286
PsuI RGATCY 3 cut(s) 375, 416, 515
SaqAI TTAA 4 cut(s) 159, 408, 471, 536
SatI GCNGC 1 cut(s) 316
Sau3AI GATC 5 cut(s) 321, 375, 416, 508, 515
SchI GAGTC 2 cut(s) 364, 458
SduI GDGCHC 1 cut(s) 287
SetI ASST 5 cut(s) 8, 28, 100, 153, 165
Sse9I AATT 3 cut(s) 111, 235, 433
SspMI CTAG 1 cut(s) 143
TaaI ACNGT 4 cut(s) 190, 231, 296, 466
TaqI TCGA 2 cut(s) 320, 499
TasI AATT 3 cut(s) 111, 235, 433
TfiI GAWTC 2 cut(s) 104, 496
Tru1I TTAA 4 cut(s) 159, 408, 471, 536
Tru9I TTAA 4 cut(s) 159, 408, 471, 536
TseFI GTSAC 1 cut(s) 122
TseI GCWGC 1 cut(s) 315
Tsp45I GTSAC 1 cut(s) 122
TspDTI ATGAA 3 cut(s) 153, 290, 429
VspI ATTAAT 1 cut(s) 408
XapI RAATTY 1 cut(s) 111
XceI RCATGY 1 cut(s) 532
XmnI GAANNNNTTC 1 cut(s) 39
XspI CTAG 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.