MD03G1079700.v1.1

BEST Arabidopsis thaliana protein match is Protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000148
Physical Location & Seq
Reverse (-)
6415138 .. 6416987
1850 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1079700.v1.1.491

Sequence Viewer

Length: 1398 bp
ATGGAGAACAAGATAAACTTGAAGGCTTTGGTGGATAAGCGGAGCAACAAAGTTATCTTCATAGAGTCCGACCATGCTTTTGTCGATGTTCTCCTAAGTTTCTTGACAATCCCCTTGGGAACAATAATCAAGCTTGGTCGTGAGCATTCAGTACCAGTGGAAATCGACTGCATTAACAATTTGTATTCAAGTGTAGAGGAGATTGACGCGCGTGAGTTGCGGTCAGATGCATGTAGAGAAATGTTGTTACTTCCCCGCAATGCTGCTGAATCTCATTGCAAGAACCTTGTATTGCAAATTGATCACAATGCCAAGCCAACACAGTACTTTGTATGCTCTCGTTATTGCCTGGCCACAGCCACAAGTAAGTTCTTTAGTTACTACCCAGGTCTCTTGTGTGTAGGGTGCATGGATACCATGCATCGGGAGATTTCATTTTCGGTGGATGTTGCAAGCGCCTTTGTAAAAGAGCGAGTCAGGCTTCTAATTACCGATGATTTACAACTGATCTCCCCTTTTTGCACATCAATCGTTTCTTTATTTACCAAGCTTGGAGTCACCAATAGGAATACTACGGAGGAGTTGCATTTTAATATTGGAGTTGATGAGGTTATGAATTTGCTTATAAGCTCCTTAGTATCAAAGACGCCATTGACCGAAACTCTACTGAAGCATAAACCCGTGGCCGAACTGAACCATGACAACAATTATCAAGCTGTACACATTGATCCGCAAACAGGAGGAGAGACGGTGTTGATGGAAGAAGACAACATTTCTATTAAGCTTATAATTAGCAAATCTAAGAACATTGTTTGCTACGCAGAAGCCGGGGAGGATTTTGTTAATTTACTCTTCAGTTTTCTAACTCTGCCACTTGGGTTTGTAACAAAGCAGATACAGGATGGGTCTCTGAAGGGATGCATTGATAAGTTGTACTGGAGTGTCCAAGATCTCGATGCGCAATACTTGAAGTCAAATCATCACAAGGAAATGCTACTCAATCCGAAGCTTGTTCCTGGTTTTTGCTACAACAGTCTTTTAGGAATTGAGGAAGCCTCATATTATTATCTCGGCAGTGGGCTAACTACTGTTAGTTCCCTTATCCATTCTAATACGTCATCGGAGTCATTTAAAATCGAACCCACAGATCACAACTCCAGTGCTCGAGGATTTTTAAAAGGACCAGCGATTTTCACAGTAACTGACAATCTGGTCATAAGACCGATATCTACAATCTTTGAGCTGTCTGTTCTTGACCAATTGAATGTACCTTTCACTGACATTGAAGAAAGAGTTATGCTTATGGGCAAGAAGTTGGCTCTGAGTCTTTTGGTAGCTTCTTTTGCTTCTGACTCTGCATTAACGAATGCCTTCATTAGCGAGCCATATCAAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

466

Amino Acids

51.94

Weight (kDa)

5.31

Isoelectric Point (pI)

40.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 2 - 437 6.3e-113 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 626, 788
AasI GACNNNNNNGTC 1 cut(s) 1211
Acc16I TGCGCA 1 cut(s) 960
AccII CGCG 2 cut(s) 209, 211
AciI CCGC 4 cut(s) 40, 220, 256, 731
AclWI GGATC 1 cut(s) 722
AcoI YGGCCR 2 cut(s) 351, 684
AcsI RAATTY 1 cut(s) 616
AcuI CTGAAG 3 cut(s) 689, 838, 932
AcyI GRCGYC 1 cut(s) 647
AfaI GTAC 5 cut(s) 153, 326, 720, 935, 1269
AfiI CCNNNNNNNGG 2 cut(s) 423, 737
AgsI TTSAA 5 cut(s) 22, 189, 970, 1264, 1286
AjnI CCWGG 3 cut(s) 348, 385, 1015
AluBI AGCT 8 cut(s) 133, 550, 630, 716, 784, 1009, 1243, 1337
AluI AGCT 8 cut(s) 133, 550, 630, 716, 784, 1009, 1243, 1337
Alw21I GWGCWC 1 cut(s) 1165
Alw26I GTCTC 3 cut(s) 395, 740, 912
AlwI GGATC 1 cut(s) 722
AlwNI CAGNNNCTG 1 cut(s) 1202
Ama87I CYCGRG 1 cut(s) 1164
AoxI GGCC 2 cut(s) 351, 684
ApeKI GCWGC 1 cut(s) 263
ApoI RAATTY 1 cut(s) 616
ArsI GACNNNNNNTTYG 2 cut(s) 62, 94
Asp700I GAANNNNTTC 1 cut(s) 1370
AspLEI GCGC 3 cut(s) 211, 458, 961
AspS9I GGNCC 1 cut(s) 1181
AsuC2I CCSGG 1 cut(s) 829
AsuHPI GGTGA 1 cut(s) 550
AvaI CYCGRG 1 cut(s) 1164
AvaII GGWCC 1 cut(s) 1181
BalI TGGCCA 1 cut(s) 353
BbsI GAAGAC 1 cut(s) 771
Bbv12I GWGCWC 1 cut(s) 1165
BbvI GCAGC 1 cut(s) 250
BccI CCATC 2 cut(s) 751, 896
BcgI CGANNNNNNTGC 2 cut(s) 511, 545
BciT130I CCWGG 3 cut(s) 350, 387, 1017
BciVI GTATCC 1 cut(s) 406
BclI TGATCA 1 cut(s) 301
BcnI CCSGG 1 cut(s) 829
BcoDI GTCTC 3 cut(s) 395, 740, 912
BfoI RGCGCY 1 cut(s) 459
BfuI GTATCC 1 cut(s) 406
BglII AGATCT 1 cut(s) 949
BisI GCNGC 1 cut(s) 264
BlsI GCNGC 1 cut(s) 265
BmcAI AGTACT 1 cut(s) 326
Bme1390I CCNGG 4 cut(s) 350, 387, 829, 1017
Bme18I GGWCC 1 cut(s) 1181
BmeT110I CYCGRG 1 cut(s) 1164
BmgT120I GGNCC 1 cut(s) 1181
BmrFI CCNGG 4 cut(s) 350, 387, 829, 1017
BmsI GCATC 4 cut(s) 217, 430, 908, 946
BpiI GAAGAC 1 cut(s) 771
BplI GAGNNNNNCTC 2 cut(s) 1040, 1072
BpmI CTGGAG 2 cut(s) 958, 1141
BpuMI CCSGG 1 cut(s) 829
BsaHI GRCGYC 1 cut(s) 647
BsaI GGTCTC 2 cut(s) 395, 912
BsaJI CCNNGG 4 cut(s) 114, 385, 681, 828
BsaXI ACNNNNNCTCC 2 cut(s) 735, 765
Bsc4I CCNNNNNNNGG 2 cut(s) 423, 737
Bse1I ACTGG 3 cut(s) 155, 941, 1158
Bse3DI GCAATG 2 cut(s) 265, 274
BseBI CCWGG 3 cut(s) 350, 387, 1017
BseDI CCNNGG 4 cut(s) 114, 385, 681, 828
BseGI GGATG 3 cut(s) 451, 907, 923
BseLI CCNNNNNNNGG 2 cut(s) 423, 737
BseMI GCAATG 2 cut(s) 265, 274
BseMII CTCAG 1 cut(s) 1313
BseNI ACTGG 3 cut(s) 155, 941, 1158
BseRI GAGGAG 3 cut(s) 212, 593, 756
BseXI GCAGC 1 cut(s) 250
Bsh1236I CGCG 2 cut(s) 209, 211
BshFI GGCC 2 cut(s) 353, 686
BsiHKAI GWGCWC 1 cut(s) 1165
BsiHKCI CYCGRG 1 cut(s) 1164
BsiSI CCGG 1 cut(s) 828
BslI CCNNNNNNNGG 2 cut(s) 423, 737
BsmAI GTCTC 3 cut(s) 395, 740, 912
BsmBI CGTCTC 1 cut(s) 740
BsmI GAATGC 2 cut(s) 145, 1372
BsnI GGCC 2 cut(s) 353, 686
Bso31I GGTCTC 2 cut(s) 395, 912
BsoBI CYCGRG 1 cut(s) 1164
Bsp1286I GDGCHC 1 cut(s) 1165
Bsp1407I TGTACA 1 cut(s) 718
Bsp143I GATC 5 cut(s) 301, 507, 727, 949, 1147
BspACI CCGC 4 cut(s) 40, 220, 256, 731
BspANI GGCC 2 cut(s) 353, 686
BspCNI CTCAG 1 cut(s) 1314
BspFNI CGCG 2 cut(s) 209, 211
BspPI GGATC 1 cut(s) 722
BspTNI GGTCTC 2 cut(s) 395, 912
BsrDI GCAATG 2 cut(s) 265, 274
BsrGI TGTACA 1 cut(s) 718
BsrI ACTGG 3 cut(s) 155, 941, 1158
BssECI CCNNGG 4 cut(s) 114, 385, 681, 828
BssMI GATC 5 cut(s) 301, 507, 727, 949, 1147
BssNI GRCGYC 1 cut(s) 647
BssT1I CCWWGG 1 cut(s) 114
Bst2UI CCWGG 3 cut(s) 350, 387, 1017
Bst4CI ACNGT 5 cut(s) 324, 751, 1034, 1090, 1198
Bst6I CTCTTC 1 cut(s) 857
BstACI GRCGYC 1 cut(s) 647
BstAUI TGTACA 1 cut(s) 718
BstC8I GCNNGC 2 cut(s) 454, 1382
BstDEI CTNAG 4 cut(s) 95, 634, 801, 1322
BstDSI CCRYGG 1 cut(s) 681
BstF5I GGATG 3 cut(s) 451, 907, 923
BstFNI CGCG 2 cut(s) 209, 211
BstH2I RGCGCY 1 cut(s) 459
BstHHI GCGC 3 cut(s) 211, 458, 961
BstKTI GATC 5 cut(s) 304, 510, 730, 952, 1150
BstMAI GTCTC 3 cut(s) 395, 740, 912
BstMBI GATC 5 cut(s) 301, 507, 727, 949, 1147
BstMWI GCNNNNNNNGC 3 cut(s) 217, 478, 1343
BstNI CCWGG 3 cut(s) 350, 387, 1017
BstNSI RCATGY 1 cut(s) 234
BstSCI CCNGG 4 cut(s) 348, 385, 827, 1015
BstUI CGCG 2 cut(s) 209, 211
BstV1I GCAGC 1 cut(s) 250
BstV2I GAAGAC 1 cut(s) 771
BstX2I RGATCY 1 cut(s) 949
BstYI RGATCY 1 cut(s) 949
BsuI GTATCC 1 cut(s) 406
BsuRI GGCC 2 cut(s) 353, 686
BtgI CCRYGG 1 cut(s) 681
BtsCI GGATG 3 cut(s) 451, 907, 923
BtsI GCAGTG 1 cut(s) 1081
BtsIMutI CAGTG 4 cut(s) 162, 1081, 1165, 1275
Cac8I GCNNGC 2 cut(s) 454, 1382
CaiI CAGNNNCTG 1 cut(s) 1202
CfoI GCGC 3 cut(s) 211, 458, 961
Cfr13I GGNCC 1 cut(s) 1181
CseI GACGC 2 cut(s) 215, 655
Csp6I GTAC 5 cut(s) 152, 325, 719, 934, 1268
CviAII CATG 5 cut(s) 74, 231, 409, 418, 698
CviQI GTAC 5 cut(s) 152, 325, 719, 934, 1268
DdeI CTNAG 4 cut(s) 95, 634, 801, 1322
DpnI GATC 5 cut(s) 303, 509, 729, 951, 1149
DpnII GATC 5 cut(s) 301, 507, 727, 949, 1147
DraI TTTAAA 2 cut(s) 1132, 1176
DrdI GACNNNNNNGTC 1 cut(s) 1211
DseDI GACNNNNNNGTC 1 cut(s) 1211
EaeI YGGCCR 2 cut(s) 351, 684
Eam1104I CTCTTC 1 cut(s) 857
EarI CTCTTC 1 cut(s) 857
Eco130I CCWWGG 1 cut(s) 114
Eco31I GGTCTC 2 cut(s) 395, 912
Eco32I GATATC 1 cut(s) 1227
Eco47I GGWCC 1 cut(s) 1181
Eco57I CTGAAG 3 cut(s) 689, 838, 932
Eco88I CYCGRG 1 cut(s) 1164
EcoRII CCWGG 3 cut(s) 348, 385, 1015
EcoRV GATATC 1 cut(s) 1227
EcoT14I CCWWGG 1 cut(s) 114
EcoT22I ATGCAT 3 cut(s) 232, 423, 923
ErhI CCWWGG 1 cut(s) 114
Esp3I CGTCTC 1 cut(s) 740
FaeI CATG 5 cut(s) 77, 234, 412, 421, 701
FalI AAGNNNNNCTT 1 cut(s) 34
FatI CATG 5 cut(s) 73, 230, 408, 417, 697
FauI CCCGC 1 cut(s) 263
FbaI TGATCA 1 cut(s) 301
Fnu4HI GCNGC 1 cut(s) 264
FokI GGATG 3 cut(s) 458, 914, 930
Fsp4HI GCNGC 1 cut(s) 264
FspI TGCGCA 1 cut(s) 960
GlaI GCGC 3 cut(s) 210, 457, 960
GluI GCNGC 1 cut(s) 264
GsuI CTGGAG 2 cut(s) 958, 1141
HaeII RGCGCY 1 cut(s) 459
HaeIII GGCC 2 cut(s) 353, 686
HapII CCGG 1 cut(s) 828
HgaI GACGC 2 cut(s) 215, 655
HhaI GCGC 3 cut(s) 211, 458, 961
Hin1I GRCGYC 1 cut(s) 647
Hin1II CATG 5 cut(s) 77, 234, 412, 421, 701
Hin6I GCGC 3 cut(s) 209, 456, 959
HinP1I GCGC 3 cut(s) 209, 456, 959
HindIII AAGCTT 4 cut(s) 131, 548, 782, 1007
HinfI GANTC 7 cut(s) 65, 269, 474, 555, 1124, 1324, 1352
HpaII CCGG 1 cut(s) 828
HphI GGTGA 1 cut(s) 550
Hpy166II GTNNAC 1 cut(s) 721
Hpy188I TCNGA 7 cut(s) 70, 226, 912, 1005, 1123, 1323, 1351
Hpy188III TCNNGA 6 cut(s) 103, 140, 425, 953, 1253, 1391
Hpy8I GTNNAC 1 cut(s) 721
HpyAV CCTTC 3 cut(s) 16, 907, 1381
HpyCH4III ACNGT 5 cut(s) 324, 751, 1034, 1090, 1198
HpyCH4IV ACGT 1 cut(s) 1115
HpyF10VI GCNNNNNNNGC 3 cut(s) 217, 478, 1343
HpyF3I CTNAG 4 cut(s) 95, 634, 801, 1322
HpySE526I ACGT 1 cut(s) 1115
Hsp92I GRCGYC 1 cut(s) 647
Hsp92II CATG 5 cut(s) 77, 234, 412, 421, 701
HspAI GCGC 3 cut(s) 209, 456, 959
Ksp22I TGATCA 1 cut(s) 301
Kzo9I GATC 5 cut(s) 301, 507, 727, 949, 1147
LmnI GCTCC 2 cut(s) 42, 635
Lsp1109I GCAGC 1 cut(s) 250
LweI GCATC 4 cut(s) 217, 430, 908, 946
MaeII ACGT 1 cut(s) 1115
MaeIII GTNAC 5 cut(s) 246, 377, 556, 883, 1198
MalI GATC 5 cut(s) 303, 509, 729, 951, 1149
MboI GATC 5 cut(s) 301, 507, 727, 949, 1147
MboII GAAGA 5 cut(s) 49, 773, 776, 844, 1298
MfeI CAATTG 1 cut(s) 1259
MflI RGATCY 1 cut(s) 949
MhlI GDGCHC 1 cut(s) 1165
MlsI TGGCCA 1 cut(s) 353
MluCI AATT 9 cut(s) 178, 297, 486, 616, 706, 789, 844, 1044, 1259
MluNI TGGCCA 1 cut(s) 353
MlyI GAGTC 6 cut(s) 74, 483, 564, 1133, 1333, 1346
MmeI TCCRAC 1 cut(s) 93
MnlI CCTC 8 cut(s) 190, 571, 601, 734, 826, 1042, 1066, 1160
Mox20I TGGCCA 1 cut(s) 353
Mph1103I ATGCAT 3 cut(s) 232, 423, 923
MroXI GAANNNNTTC 1 cut(s) 1370
MscI TGGCCA 1 cut(s) 353
MseI TTAA 7 cut(s) 174, 591, 780, 843, 1131, 1175, 1361
Msp20I TGGCCA 1 cut(s) 353
MspI CCGG 1 cut(s) 828
MspR9I CCNGG 4 cut(s) 350, 387, 829, 1017
MunI CAATTG 1 cut(s) 1259
Mva1269I GAATGC 2 cut(s) 145, 1372
MvaI CCWGG 3 cut(s) 350, 387, 1017
MvnI CGCG 2 cut(s) 209, 211
MwoI GCNNNNNNNGC 3 cut(s) 217, 478, 1343
NciI CCSGG 1 cut(s) 829
NdeII GATC 5 cut(s) 301, 507, 727, 949, 1147
NlaIII CATG 5 cut(s) 77, 234, 412, 421, 701
NmeAIII GCCGAG 1 cut(s) 1050
NmuCI GTSAC 1 cut(s) 556
NsbI TGCGCA 1 cut(s) 960
NsiI ATGCAT 3 cut(s) 232, 423, 923
NspI RCATGY 1 cut(s) 234
PaeR7I CTCGAG 1 cut(s) 1164
PctI GAATGC 2 cut(s) 145, 1372
PdmI GAANNNNTTC 1 cut(s) 1370
PfeI GAWTC 1 cut(s) 269
PkrI GCNGC 1 cut(s) 265
PleI GAGTC 6 cut(s) 73, 482, 563, 1132, 1332, 1346
PpsI GAGTC 6 cut(s) 73, 482, 563, 1132, 1332, 1346
PsiI TTATAA 2 cut(s) 626, 788
Psp6I CCWGG 3 cut(s) 348, 385, 1015
PspGI CCWGG 3 cut(s) 348, 385, 1015
PspPI GGNCC 1 cut(s) 1181
PspXI VCTCGAGB 1 cut(s) 1164
PstNI CAGNNNCTG 1 cut(s) 1202
PsuI RGATCY 1 cut(s) 949
RsaI GTAC 5 cut(s) 153, 326, 720, 935, 1269
RsaNI GTAC 5 cut(s) 152, 325, 719, 934, 1268
SaqAI TTAA 7 cut(s) 174, 591, 780, 843, 1131, 1175, 1361
SatI GCNGC 1 cut(s) 264
Sau3AI GATC 5 cut(s) 301, 507, 727, 949, 1147
Sau96I GGNCC 1 cut(s) 1181
ScaI AGTACT 1 cut(s) 326
SchI GAGTC 6 cut(s) 74, 483, 564, 1133, 1333, 1346
ScrFI CCNGG 4 cut(s) 350, 387, 829, 1017
SduI GDGCHC 1 cut(s) 1165
SfaNI GCATC 4 cut(s) 217, 430, 908, 946
Sfr274I CTCGAG 1 cut(s) 1164
SinI GGWCC 1 cut(s) 1181
SlaI CTCGAG 1 cut(s) 1164
SmlI CTYRAG 1 cut(s) 1164
SmoI CTYRAG 1 cut(s) 1164
Sse9I AATT 9 cut(s) 178, 297, 486, 616, 706, 789, 844, 1044, 1259
SsiI CCGC 4 cut(s) 40, 220, 256, 731
SspI AATATT 1 cut(s) 595
StyD4I CCNGG 4 cut(s) 348, 385, 827, 1015
StyI CCWWGG 1 cut(s) 114
TaaI ACNGT 5 cut(s) 324, 751, 1034, 1090, 1198
TaiI ACGT 1 cut(s) 1118
TaqI TCGA 5 cut(s) 84, 165, 954, 1137, 1165
TaqII GACCGA 2 cut(s) 671, 1237
TasI AATT 9 cut(s) 178, 297, 486, 616, 706, 789, 844, 1044, 1259
TatI WGTACW 3 cut(s) 324, 718, 933
TfiI GAWTC 1 cut(s) 269
Tru1I TTAA 7 cut(s) 174, 591, 780, 843, 1131, 1175, 1361
Tru9I TTAA 7 cut(s) 174, 591, 780, 843, 1131, 1175, 1361
TscAI CASTG 4 cut(s) 162, 1081, 1165, 1282
TseFI GTSAC 1 cut(s) 556
TseI GCWGC 1 cut(s) 263
Tsp45I GTSAC 1 cut(s) 556
TspDTI ATGAA 4 cut(s) 49, 423, 629, 1363
TspGWI ACGGA 1 cut(s) 590
TspRI CASTG 4 cut(s) 162, 1081, 1165, 1282
VpaK11BI GGWCC 1 cut(s) 1181
XapI RAATTY 1 cut(s) 616
XceI RCATGY 1 cut(s) 234
XhoI CTCGAG 1 cut(s) 1164
XmnI GAANNNNTTC 1 cut(s) 1370
ZrmI AGTACT 1 cut(s) 326
Zsp2I ATGCAT 3 cut(s) 232, 423, 923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.