Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000257

Physical Location & Seq

Genomic Coordinates Forward (+)

17256338 .. 17259462

Gene Structure 3125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G46850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGGCAACTGCTGTCTCCTATTGTCTCCTCTCATGTATCTTTGCCTTGCTTGTTGTGAGTTTCGCTTCAGCAGGCAAAGATGATCAAGACAAACAGGTGTATATAGTATACATGGGTGCACTTCCTTCTCGTGTTGACTACATGCCAATGTCCCATCACACTAGTATTCTTCAAGATGTCACCGGAGAGAGTTCGATCCAGGATCGTTTGGTTAGGAATTATAAAAGGAGTTTCAACGGATTCGCAGCCCGGCTTACCGAATCAGAAAGAGAGATACTAGCTAGTATGGACGAAGTTGTGTCTGTGTTTCCTAGCAAGAATCTAAATCTCCAAACAACAACGTCATGGAATTTCATGGGCCTCAAGGAAGGCAAACGTACAAAGCGAAACCCTCTCATAGAGAGCGATACAATCATCGGTGTCATTGACAGTGGAATCTACCCTGAATCGGACAGCTTCAGCGGCAAAGGCTTTGGTCCTCCTCCTAAAAAATGGAAAGGTGTTTGCAAAGGCGGCACAAACTTCACTTGCAACAACAAGCTTATTGGAGCACGGTACTACACACCCAAACTAGAGGGGTTTCCTGAGTCCGCAAGGGACAACACGGGACATGGCTCGCACACAGCATCCATAGCGGCTGGAAACGCTGTGAAGCATGTGAGCTTTTACGGGCTCGGTAATGGAACTGTGAGAGGTGGCGTTCCAGCTGCAAGAATAGCGGTTTATAAAGTATGTGACCCTGGTGTCATAAGGTGCACATCTGATGGAATTCTAGCCGCATTTGATGATGCCATAGCGGATAAGGTGGACATCATTACCGTATCCCTCGGTGCGGATGCAGTTGGTACATTTGAGGAGGACACGCTTGCGATTGGGGCTTTCCATGCCATGGCCAAGGGAATCCTCACTGTGAATGGCGCAGGAAACAATGGTCCAGAACGTAGAACAATCGTGAGTATGGCGCCGTGGCTCTTCACTGTTGCTGCTAGTAATATGAATCGTGCGTTCATCACCAAAGTTGTTCTCGGAAACGGCAAGACAATTGTGGGAAGATCAGTAAATTCGTTTGATCTTAACGGAAAGAAGTACCCTCTAGTATACGGAAAGTCAGCTTCAAGTAGATGCGATGCTTCTTCAGCCGGGTTTTGCTCACCAGGGTGTCTAGACAGTAAACGTGTGAAAGGTAAGATTGTGTTATGTGATACCCAGCGAAATCCCGGAGAAGCTCAAGCTATGGGAGCCGTCGCATCCATTGTTAGGAACCCCTATGAAGACGCGGCTAGTGTCTTCTCATTTCCAGTCTCTGTTCTATCGGAAGATGACTATAATATTGTCCTCTCATATGTGAACTCCACAAAAAACCCCAAAGCAGCTGTTCTGAAAAGTGAGACAATCTTTAACCAGAAAGCTCCTGTCGTGGCTTCCTACTCTTCTCGTGGCCCAAACCCACTCATTCATGATATTTTGAAGCCGGATATAACAGCGCCAGGATCAGAGATTCTTGCTGCTTATTCTCCTTATGTCCCACCAAGCGAATCAGATACAAGACATGTAAAGTACACAGTTATTAGCGGAACTTCAATGTCTTGTCCCCACGTTGCTGGTGTAGCCGCCTACATAAAAACGTTTCACCCACTCTGGTCTCCTTCCATGATCCAATCTGCCATCATGACTACCGCTTGGCCAATGAATGCATCTACTTCTCCGTCTAACGAGTTGGCCGAATTTGCTTACGGAGCGGGCCATGTCGATCCCATAGCAGCAATTCATCCTGGACTAGTATATGAAGCTAATAAATCCGACCATATCACCTTTCTCTGCGGCTTCAACTACACTGGAAAGAAGTTAAGACTCATCTCTGGTGATAGCAGCAGTTGCACTAAAGAACAGACTAAATCGCTAACACGAAACTTAAACTACCCTTCGATGTCTGCTCAAGTATCAGGAACAAAACCCTTCAAAGTGACTTTCCGTAGAACAGTCACTAACGTCGGTAGACCTAACGCTACATACAAAGCAAAGGTAGTCGGATCTAAACTCAAAGTCAAGGTTGTTCCGGCAGTCTTGTCTTTAAAGTCATTGTACGAGAAGAAGTCCTTCACGGTAACCGTTTCAGGCGCCGGTCCCAAAGCTGAAAATCTTGTCTCGGCACAGCTGATCTGGTCCGATGGTGTCCACTTTGTGAGAAGCCCCATTGTTGTTTATGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009719 GO:0009725 GO:0009753 GO:0010033 GO:0010035 GO:0010038 GO:0016787 GO:0017171 GO:0019538 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044464 GO:0046686 GO:0050896 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

736

Amino Acids

78.8

Weight (kDa)

9.22

Isoelectric Point (pI)

37.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	33 - 110	1.3e-17	Peptidase inhibitor I9
Peptidase_S8	PF00082	135 - 581	2.6e-41	Subtilase family
fn3_6	PF17766	637 - 734	1.1e-26	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46840 AT3G46850 AT5G58820 AT5G58830 AT5G58840 AT5G58840 AT5G58840 AT5G59090 AT5G59090 AT5G59090 AT5G59100 AT5G59120 AT5G59130 AT5G59130 AT5G59130 AT5G59130 AT5G59190
fragaria_vesca	FvH4_3g37170 FvH4_7g02830 FvH4_7g02840
malus_domestica	MD02G1288900.v1.1 MD02G1289100.v1.1 MD02G1289300.v1.1 MD02G1289400.v1.1 MD02G1289500.v1.1 MD03G1083800.v1.1 MD03G1084000.v1.1 MD07G1037500.v1.1 MD07G1037600.v1.1 MD07G1037700.v1.1 MD07G1039300.v1.1 MD11G1091900.v1.1 MD11G1092000.v1.1
prunus_persica	Prupe.2G032800_v2.0.a1 Prupe.2G033000_v2.0.a1 Prupe.2G033100_v2.0.a1 Prupe.2G035100_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067700_v2.0.a1 Prupe.6G067800_v2.0.a1
pyrus_communis	pycom02g24440 pycom02g24470 pycom02g24480 pycom02g24500 pycom02g24510 pycom03g06650 pycom07g02730 pycom11g07710 pycom11g07720
rosa_chinensis	RchiOBHm_Chr1g0323281 RchiOBHm_Chr1g0323291 RchiOBHm_Chr1g0323311 RchiOBHm_Chr1g0323341 RchiOBHm_Chr1g0323351 RchiOBHm_Chr1g0323371 RchiOBHm_Chr1g0323431 RchiOBHm_Chr1g0323461 RchiOBHm_Chr1g0324031 RchiOBHm_Chr5g0066891 RchiOBHm_Chr5g0066901
rosa_laevigata	RLG00000030004 RLG00000030235 RLG00000030328 RLG00000030329 RLG00000030334 RLG00000030336 RLG00000030337 RLG00000030338 RLG00000030339 RLG00000030340 RLG00000035885 RLG00000035886 RLG00000035888 RLG00000035890
rosa_multiflora	Rmu_co8481685.1_g000001 Rmu_co8485349.1_g000001 Rmu_sc0000605.1_g000061 Rmu_sc0000804.1_g000004 Rmu_sc0000804.1_g000008 Rmu_sc0002263.1_g000074 Rmu_sc0002263.1_g000076 Rmu_sc0002263.1_g000077 Rmu_sc0003418.1_g000005 Rmu_sc0003418.1_g000007 Rmu_sc0003418.1_g000008 Rmu_sc0008378.1_g000013 Rmu_sc0010151.1_g000012
rosa_roxburghii	Rroxscaffold_1G00014220 Rroxscaffold_1G00014230 Rroxscaffold_4G00325970 Rroxscaffold_4G00326160 Rroxscaffold_4G00326570 Rroxscaffold_4G00326580 Rroxscaffold_4G00326650 Rroxscaffold_4G00326670 Rroxscaffold_4G00326680 Rroxscaffold_4G00326700
rosa_rugosa	Rorug01G0037300 Rorug01G0037400 Rorug01G0037600 Rorug01G0037700 Rorug01G0037800 Rorug01G0037800 Rorug01G0042100 Rorug01G0065000 Rorug05G0379300 Rorug05G0379400
rosa_samantha	Rh1AG054700 Rh1AG054900 Rh1AG055000 Rh1AG055200 Rh1AG055300 Rh1BG047500 Rh1CG055800 Rh1CG056000 Rh1CG061400 Rh1DG059900 Rh1DG060200 Rh5AG439100 Rh5AG439200 Rh5BG455900 Rh5CG478000 Rh5CG478300
rosa_wichuraiana	Rw1G004750 Rw1G004760 Rw1G004770 Rw1G004790 Rw1G005080 Rw1G006510 Rw5G041060 Rw5G041070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	222, 726
AasI	GACNNNNNNGTC	1 cut(s)	743
AccB1I	GGYRCC	2 cut(s)	961, 2117
AccB7I	CCANNNNNTGG	1 cut(s)	889
AccBSI	CCGCTC	1 cut(s)	1739
AccI	GTMKAC	3 cut(s)	108, 1098, 1996
AccII	CGCG	1 cut(s)	1277
AclI	AACGTT	1 cut(s)	1625
AclWI	GGATC	6 cut(s)	190, 210, 1498, 1648, 1745, 2038
AcoI	YGGCCR	3 cut(s)	891, 1682, 1719
AcsI	RAATTY	4 cut(s)	349, 768, 1060, 1724
AcuI	CTGAAG	3 cut(s)	51, 442, 1119
AcyI	GRCGYC	2 cut(s)	962, 2118
AdeI	CACNNNGTG	1 cut(s)	2182
AfaI	GTAC	6 cut(s)	379, 557, 847, 1088, 1559, 2084
AfiI	CCNNNNNNNGG	4 cut(s)	448, 832, 889, 1257
AflIII	ACRYGT	2 cut(s)	1174, 1549
AgsI	TTSAA	7 cut(s)	173, 235, 1116, 1468, 1581, 1828, 1960
AhlI	ACTAGT	2 cut(s)	161, 1777
AjnI	CCWGG	5 cut(s)	198, 739, 1153, 1486, 1771
AleI	CACNNNNGTG	1 cut(s)	1156
Alw21I	GWGCWC	3 cut(s)	121, 553, 758
Alw26I	GTCTC	6 cut(s)	19, 29, 1306, 1382, 1647, 2149
Alw44I	GTGCAC	2 cut(s)	117, 754
AlwI	GGATC	6 cut(s)	190, 210, 1498, 1648, 1745, 2038
AlwNI	CAGNNNCTG	1 cut(s)	1304
AoxI	GGCC	6 cut(s)	358, 891, 1438, 1682, 1719, 1741
ApaLI	GTGCAC	2 cut(s)	117, 754
ApeKI	GCWGC	7 cut(s)	245, 707, 983, 1370, 1505, 1760, 1869
ApoI	RAATTY	4 cut(s)	349, 768, 1060, 1724
Asp700I	GAANNNNTTC	1 cut(s)	2096
AspLEI	GCGC	4 cut(s)	920, 964, 1486, 2120
AspS9I	GGNCC	7 cut(s)	358, 476, 932, 1439, 1741, 2123, 2163
AsuC2I	CCSGG	3 cut(s)	250, 1141, 1218
AsuHPI	GGTGA	6 cut(s)	172, 1003, 1143, 1622, 1801, 1874
AvaII	GGWCC	4 cut(s)	476, 932, 2123, 2163
BaeGI	GKGCMC	2 cut(s)	121, 758
BalI	TGGCCA	2 cut(s)	893, 1684
BanI	GGYRCC	2 cut(s)	961, 2117
BanII	GRGCYC	1 cut(s)	675
BauI	CACGAG	2 cut(s)	129, 1434
BbsI	GAAGAC	2 cut(s)	1278, 1279
Bbv12I	GWGCWC	3 cut(s)	121, 553, 758
BbvI	GCAGC	7 cut(s)	257, 694, 970, 1382, 1492, 1772, 1881
BccI	CCATC	4 cut(s)	162, 758, 1673, 2162
BceAI	ACGGC	3 cut(s)	949, 1048, 1226
BciT130I	CCWGG	5 cut(s)	200, 741, 1155, 1488, 1773
BciVI	GTATCC	1 cut(s)	832
BclI	TGATCA	1 cut(s)	82
BcnI	CCSGG	3 cut(s)	250, 1141, 1218
BcoDI	GTCTC	6 cut(s)	19, 29, 1306, 1382, 1647, 2149
BcuI	ACTAGT	2 cut(s)	161, 1777
BfoI	RGCGCY	3 cut(s)	965, 1487, 2121
BfuI	GTATCC	1 cut(s)	832
Bme1390I	CCNGG	8 cut(s)	200, 250, 741, 1141, 1155, 1218, 1488, 1773
Bme18I	GGWCC	4 cut(s)	476, 932, 2123, 2163
BmgT120I	GGNCC	7 cut(s)	358, 476, 932, 1439, 1741, 2123, 2163
BmiI	GGNNCC	5 cut(s)	963, 1240, 1262, 2119, 2125
BmrFI	CCNGG	8 cut(s)	200, 250, 741, 1141, 1155, 1218, 1488, 1773
BmsI	GCATC	7 cut(s)	635, 778, 826, 1112, 1117, 1256, 1703
BpiI	GAAGAC	2 cut(s)	1278, 1279
BpuEI	CTTGAG	3 cut(s)	347, 1212, 1920
BpuMI	CCSGG	3 cut(s)	250, 1141, 1218
BsaHI	GRCGYC	2 cut(s)	962, 2118
BsaI	GGTCTC	1 cut(s)	1647
BsaJI	CCNNGG	6 cut(s)	739, 826, 888, 894, 965, 1154
BsaWI	WCCGGW	1 cut(s)	182
Bsc4I	CCNNNNNNNGG	4 cut(s)	448, 832, 889, 1257
Bse118I	RCCGGY	1 cut(s)	2120
Bse1I	ACTGG	2 cut(s)	1298, 1840
BseBI	CCWGG	5 cut(s)	200, 741, 1155, 1488, 1773
BseDI	CCNNGG	6 cut(s)	739, 826, 888, 894, 965, 1154
BseGI	GGATG	4 cut(s)	626, 841, 1247, 1768
BseLI	CCNNNNNNNGG	4 cut(s)	448, 832, 889, 1257
BseMII	CTCAG	1 cut(s)	576
BseNI	ACTGG	2 cut(s)	1298, 1840
BseRI	GAGGAG	3 cut(s)	17, 471, 869
BseSI	GKGCMC	2 cut(s)	121, 758
BseXI	GCAGC	7 cut(s)	257, 694, 970, 1382, 1492, 1772, 1881
BseYI	CCCAGC	1 cut(s)	1206
Bsh1236I	CGCG	1 cut(s)	1277
BshFI	GGCC	6 cut(s)	360, 893, 1440, 1684, 1721, 1743
BshNI	GGYRCC	2 cut(s)	961, 2117
BsiHKAI	GWGCWC	3 cut(s)	121, 553, 758
BsiSI	CCGG	7 cut(s)	183, 250, 1140, 1218, 1472, 2057, 2121
BslFI	GGGAC	6 cut(s)	136, 611, 621, 1508, 1575, 2109
BslI	CCNNNNNNNGG	4 cut(s)	448, 832, 889, 1257
BsmAI	GTCTC	6 cut(s)	19, 29, 1306, 1382, 1647, 2149
BsmFI	GGGAC	6 cut(s)	136, 611, 621, 1508, 1575, 2109
BsmI	GAATGC	1 cut(s)	1696
BsnI	GGCC	6 cut(s)	360, 893, 1440, 1684, 1721, 1743
Bso31I	GGTCTC	1 cut(s)	1647
Bsp1286I	GDGCHC	4 cut(s)	121, 553, 675, 758
Bsp19I	CCATGG	1 cut(s)	888
BspANI	GGCC	6 cut(s)	360, 893, 1440, 1684, 1721, 1743
BspCNI	CTCAG	1 cut(s)	577
BspFNI	CGCG	1 cut(s)	1277
BspHI	TCATGA	2 cut(s)	1456, 1668
BspLI	GGNNCC	5 cut(s)	963, 1240, 1262, 2119, 2125
BspPI	GGATC	6 cut(s)	190, 210, 1498, 1648, 1745, 2038
BspQI	GCTCTTC	1 cut(s)	977
BspT107I	GGYRCC	2 cut(s)	961, 2117
BspTNI	GGTCTC	1 cut(s)	1647
BsrBI	CCGCTC	1 cut(s)	1739
BsrFI	RCCGGY	1 cut(s)	2120
BsrI	ACTGG	2 cut(s)	1298, 1840
BssAI	RCCGGY	1 cut(s)	2120
BssECI	CCNNGG	6 cut(s)	739, 826, 888, 894, 965, 1154
BssNAI	GTATAC	2 cut(s)	109, 1099
BssNI	GRCGYC	2 cut(s)	962, 2118
BssSI	CACGAG	2 cut(s)	129, 1434
BssT1I	CCWWGG	2 cut(s)	888, 894
Bst1107I	GTATAC	2 cut(s)	109, 1099
Bst2BI	CACGAG	2 cut(s)	129, 1434
Bst2UI	CCWGG	5 cut(s)	200, 741, 1155, 1488, 1773
Bst6I	CTCTTC	2 cut(s)	977, 1435
BstACI	GRCGYC	2 cut(s)	962, 2118
BstAPI	GCANNNNNTGC	1 cut(s)	1875
BstC8I	GCNNGC	4 cut(s)	73, 617, 867, 1741
BstDEI	CTNAG	1 cut(s)	585
BstDSI	CCRYGG	2 cut(s)	888, 965
BstEII	GGTNACC	1 cut(s)	2104
BstF5I	GGATG	4 cut(s)	626, 841, 1247, 1768
BstFNI	CGCG	1 cut(s)	1277
BstH2I	RGCGCY	3 cut(s)	965, 1487, 2121
BstHHI	GCGC	4 cut(s)	920, 964, 1486, 2120
BstMAI	GTCTC	6 cut(s)	19, 29, 1306, 1382, 1647, 2149
BstNI	CCWGG	5 cut(s)	200, 741, 1155, 1488, 1773
BstNSI	RCATGY	3 cut(s)	145, 659, 1553
BstPI	GGTNACC	1 cut(s)	2104
BstSCI	CCNGG	8 cut(s)	198, 248, 739, 1139, 1153, 1216, 1486, 1771
BstSLI	GKGCMC	2 cut(s)	121, 758
BstUI	CGCG	1 cut(s)	1277
BstV1I	GCAGC	7 cut(s)	257, 694, 970, 1382, 1492, 1772, 1881
BstV2I	GAAGAC	2 cut(s)	1278, 1279
BstX2I	RGATCY	1 cut(s)	2030
BstXI	CCANNNNNNTGG	1 cut(s)	1601
BstYI	RGATCY	1 cut(s)	2030
BstZ17I	GTATAC	2 cut(s)	109, 1099
BsuI	GTATCC	1 cut(s)	832
BsuRI	GGCC	6 cut(s)	360, 893, 1440, 1684, 1721, 1743
BtgI	CCRYGG	2 cut(s)	888, 965
BtgZI	GCGATG	1 cut(s)	1140
BtsCI	GGATG	4 cut(s)	626, 841, 1247, 1768
BtsIMutI	CAGTG	4 cut(s)	436, 906, 975, 1833
Cac8I	GCNNGC	4 cut(s)	73, 617, 867, 1741
CaiI	CAGNNNCTG	1 cut(s)	1304
CciI	TCATGA	2 cut(s)	1456, 1668
CfoI	GCGC	4 cut(s)	920, 964, 1486, 2120
Cfr10I	RCCGGY	1 cut(s)	2120
Cfr13I	GGNCC	7 cut(s)	358, 476, 932, 1439, 1741, 2123, 2163
CseI	GACGC	1 cut(s)	1283
Csp6I	GTAC	6 cut(s)	378, 556, 846, 1087, 1558, 2083
CviQI	GTAC	6 cut(s)	378, 556, 846, 1087, 1558, 2083
DdeI	CTNAG	1 cut(s)	585
DinI	GGCGCC	2 cut(s)	963, 2119
DraI	TTTAAA	1 cut(s)	2073
DraIII	CACNNNGTG	1 cut(s)	2182
DrdI	GACNNNNNNGTC	1 cut(s)	743
DseDI	GACNNNNNNGTC	1 cut(s)	743
EaeI	YGGCCR	3 cut(s)	891, 1682, 1719
Eam1104I	CTCTTC	2 cut(s)	977, 1435
EarI	CTCTTC	2 cut(s)	977, 1435
Eco130I	CCWWGG	2 cut(s)	888, 894
Eco24I	GRGCYC	1 cut(s)	675
Eco31I	GGTCTC	1 cut(s)	1647
Eco47I	GGWCC	4 cut(s)	476, 932, 2123, 2163
Eco57I	CTGAAG	3 cut(s)	51, 442, 1119
Eco91I	GGTNACC	1 cut(s)	2104
EcoO65I	GGTNACC	1 cut(s)	2104
EcoRI	GAATTC	1 cut(s)	768
EcoRII	CCWGG	5 cut(s)	198, 739, 1153, 1486, 1771
EcoT14I	CCWWGG	2 cut(s)	888, 894
EcoT22I	ATGCAT	1 cut(s)	1696
EcoT38I	GRGCYC	1 cut(s)	675
EgeI	GGCGCC	2 cut(s)	963, 2119
EheI	GGCGCC	2 cut(s)	963, 2119
ErhI	CCWWGG	2 cut(s)	888, 894
FalI	AAGNNNNNCTT	2 cut(s)	2081, 2113
FaqI	GGGAC	6 cut(s)	136, 611, 621, 1508, 1575, 2109
FauI	CCCGC	1 cut(s)	1732
FauNDI	CATATG	1 cut(s)	1342
FbaI	TGATCA	1 cut(s)	82
FblI	GTMKAC	3 cut(s)	108, 1098, 1996
FokI	GGATG	4 cut(s)	613, 848, 1234, 1755
FriOI	GRGCYC	1 cut(s)	675
GlaI	GCGC	4 cut(s)	919, 963, 1485, 2119
GsaI	CCCAGC	1 cut(s)	1210
HaeII	RGCGCY	3 cut(s)	965, 1487, 2121
HaeIII	GGCC	6 cut(s)	360, 893, 1440, 1684, 1721, 1743
HapII	CCGG	7 cut(s)	183, 250, 1140, 1218, 1472, 2057, 2121
HgaI	GACGC	1 cut(s)	1283
HhaI	GCGC	4 cut(s)	920, 964, 1486, 2120
Hin1I	GRCGYC	2 cut(s)	962, 2118
Hin6I	GCGC	4 cut(s)	918, 962, 1484, 2118
HinP1I	GCGC	4 cut(s)	918, 962, 1484, 2118
HincII	GTYRAC	1 cut(s)	136
HindII	GTYRAC	1 cut(s)	136
HindIII	AAGCTT	1 cut(s)	539
HpaII	CCGG	7 cut(s)	183, 250, 1140, 1218, 1472, 2057, 2121
HphI	GGTGA	6 cut(s)	172, 1003, 1143, 1622, 1801, 1874
Hpy188III	TCNNGA	9 cut(s)	86, 173, 584, 935, 952, 1163, 1457, 1669, 1944
Hpy99I	CGWCG	2 cut(s)	1247, 1994
HpyAV	CCTTC	6 cut(s)	135, 362, 1656, 1932, 1966, 2107
HpyCH4IV	ACGT	7 cut(s)	341, 376, 940, 1174, 1596, 1625, 1989
HpyCH4V	TGCA	8 cut(s)	119, 507, 531, 710, 756, 839, 1694, 1878
HpyF3I	CTNAG	1 cut(s)	585
HpySE526I	ACGT	7 cut(s)	341, 376, 940, 1174, 1596, 1625, 1989
Hsp92I	GRCGYC	2 cut(s)	962, 2118
HspAI	GCGC	4 cut(s)	918, 962, 1484, 2118
KasI	GGCGCC	2 cut(s)	961, 2117
Ksp22I	TGATCA	1 cut(s)	82
LguI	GCTCTTC	1 cut(s)	977
LmnI	GCTCC	4 cut(s)	548, 1238, 1414, 1736
Lsp1109I	GCAGC	7 cut(s)	257, 694, 970, 1382, 1492, 1772, 1881
LweI	GCATC	7 cut(s)	635, 778, 826, 1112, 1117, 1256, 1703
MaeII	ACGT	7 cut(s)	341, 376, 940, 1174, 1596, 1625, 1989
MaeIII	GTNAC	5 cut(s)	178, 734, 1963, 1981, 2104
MbiI	CCGCTC	1 cut(s)	1739
MboII	GAAGA	9 cut(s)	161, 964, 1062, 1125, 1279, 1283, 1328, 1422, 2101
MfeI	CAATTG	1 cut(s)	1041
MflI	RGATCY	1 cut(s)	2030
MhlI	GDGCHC	4 cut(s)	121, 553, 675, 758
MlsI	TGGCCA	2 cut(s)	893, 1684
MluCI	AATT	7 cut(s)	217, 349, 768, 1041, 1060, 1724, 1764
MluNI	TGGCCA	2 cut(s)	893, 1684
Mly113I	GGCGCC	2 cut(s)	962, 2118
MlyI	GAGTC	2 cut(s)	596, 1845
MmeI	TCCRAC	2 cut(s)	1824, 2008
Mox20I	TGGCCA	2 cut(s)	893, 1684
Mph1103I	ATGCAT	1 cut(s)	1696
MroXI	GAANNNNTTC	1 cut(s)	2096
MscI	TGGCCA	2 cut(s)	893, 1684
MseI	TTAA	6 cut(s)	1074, 1398, 1847, 1913, 2072, 2209
MslI	CAYNNNNRTG	2 cut(s)	146, 1156
Msp20I	TGGCCA	2 cut(s)	893, 1684
MspA1I	CMGCKG	4 cut(s)	462, 707, 1373, 2155
MspI	CCGG	7 cut(s)	183, 250, 1140, 1218, 1472, 2057, 2121
MspR9I	CCNGG	8 cut(s)	200, 250, 741, 1141, 1155, 1218, 1488, 1773
MunI	CAATTG	1 cut(s)	1041
Mva1269I	GAATGC	1 cut(s)	1696
MvaI	CCWGG	5 cut(s)	200, 741, 1155, 1488, 1773
MvnI	CGCG	1 cut(s)	1277
NarI	GGCGCC	2 cut(s)	962, 2118
NciI	CCSGG	3 cut(s)	250, 1141, 1218
NcoI	CCATGG	1 cut(s)	888
NdeI	CATATG	1 cut(s)	1342
NlaIV	GGNNCC	5 cut(s)	963, 1240, 1262, 2119, 2125
NmeAIII	GCCGAG	1 cut(s)	2126
NmuCI	GTSAC	4 cut(s)	178, 734, 1963, 1981
NsiI	ATGCAT	1 cut(s)	1696
NspI	RCATGY	3 cut(s)	145, 659, 1553
OliI	CACNNNNGTG	1 cut(s)	1156
PagI	TCATGA	2 cut(s)	1456, 1668
PciI	ACATGT	1 cut(s)	1549
PciSI	GCTCTTC	1 cut(s)	977
PcsI	WCGNNNNNNNCGW	2 cut(s)	382, 1719
PctI	GAATGC	1 cut(s)	1696
PdmI	GAANNNNTTC	1 cut(s)	2096
PfeI	GAWTC	9 cut(s)	240, 260, 319, 435, 446, 900, 997, 1498, 1535
PflMI	CCANNNNNTGG	1 cut(s)	889
PfoI	TCCNGGA	3 cut(s)	198, 1216, 1771
PleI	GAGTC	2 cut(s)	595, 1845
PluTI	GGCGCC	2 cut(s)	965, 2121
PpsI	GAGTC	2 cut(s)	595, 1845
PscI	ACATGT	1 cut(s)	1549
PsiI	TTATAA	2 cut(s)	222, 726
Psp1406I	AACGTT	1 cut(s)	1625
Psp6I	CCWGG	5 cut(s)	198, 739, 1153, 1486, 1771
PspEI	GGTNACC	1 cut(s)	2104
PspFI	CCCAGC	1 cut(s)	1206
PspGI	CCWGG	5 cut(s)	198, 739, 1153, 1486, 1771
PspN4I	GGNNCC	5 cut(s)	963, 1240, 1262, 2119, 2125
PspPI	GGNCC	7 cut(s)	358, 476, 932, 1439, 1741, 2123, 2163
PstNI	CAGNNNCTG	1 cut(s)	1304
PsuI	RGATCY	1 cut(s)	2030
PvuII	CAGCTG	3 cut(s)	707, 1373, 2155
RsaI	GTAC	6 cut(s)	379, 557, 847, 1088, 1559, 2084
RsaNI	GTAC	6 cut(s)	378, 556, 846, 1087, 1558, 2083
RseI	CAYNNNNRTG	2 cut(s)	146, 1156
SapI	GCTCTTC	1 cut(s)	977
SaqAI	TTAA	6 cut(s)	1074, 1398, 1847, 1913, 2072, 2209
Sau96I	GGNCC	7 cut(s)	358, 476, 932, 1439, 1741, 2123, 2163
SchI	GAGTC	2 cut(s)	596, 1845
ScrFI	CCNGG	8 cut(s)	200, 250, 741, 1141, 1155, 1218, 1488, 1773
SduI	GDGCHC	4 cut(s)	121, 553, 675, 758
SfaNI	GCATC	7 cut(s)	635, 778, 826, 1112, 1117, 1256, 1703
SfoI	GGCGCC	2 cut(s)	963, 2119
SinI	GGWCC	4 cut(s)	476, 932, 2123, 2163
SmiMI	CAYNNNNRTG	2 cut(s)	146, 1156
SmlI	CTYRAG	3 cut(s)	362, 1227, 1935
SmoI	CTYRAG	3 cut(s)	362, 1227, 1935
SpeI	ACTAGT	2 cut(s)	161, 1777
Sse9I	AATT	7 cut(s)	217, 349, 768, 1041, 1060, 1724, 1764
SspDI	GGCGCC	2 cut(s)	961, 2117
SspI	AATATT	1 cut(s)	1330
StyD4I	CCNGG	8 cut(s)	198, 248, 739, 1139, 1153, 1216, 1486, 1771
StyI	CCWWGG	2 cut(s)	888, 894
TaiI	ACGT	7 cut(s)	344, 379, 943, 1177, 1599, 1628, 1992
TaqI	TCGA	3 cut(s)	194, 1749, 1925
TasI	AATT	7 cut(s)	217, 349, 768, 1041, 1060, 1724, 1764
TatI	WGTACW	1 cut(s)	1557
TauI	GCSGC	7 cut(s)	465, 516, 638, 779, 1280, 1613, 1824
TfiI	GAWTC	9 cut(s)	240, 260, 319, 435, 446, 900, 997, 1498, 1535
Tru1I	TTAA	6 cut(s)	1074, 1398, 1847, 1913, 2072, 2209
Tru9I	TTAA	6 cut(s)	1074, 1398, 1847, 1913, 2072, 2209
TscAI	CASTG	4 cut(s)	436, 913, 982, 1840
TseFI	GTSAC	4 cut(s)	178, 734, 1963, 1981
TseI	GCWGC	7 cut(s)	245, 707, 983, 1370, 1505, 1760, 1869
Tsp45I	GTSAC	4 cut(s)	178, 734, 1963, 1981
TspDTI	ATGAA	8 cut(s)	343, 997, 1010, 1284, 1445, 1703, 1757, 1800
TspGWI	ACGGA	6 cut(s)	252, 1092, 1116, 1695, 1749, 1961
TspRI	CASTG	4 cut(s)	436, 913, 982, 1840
Van91I	CCANNNNNTGG	1 cut(s)	889
VneI	GTGCAC	2 cut(s)	117, 754
VpaK11BI	GGWCC	4 cut(s)	476, 932, 2123, 2163
XapI	RAATTY	4 cut(s)	349, 768, 1060, 1724
XbaI	TCTAGA	1 cut(s)	1162
XceI	RCATGY	3 cut(s)	145, 659, 1553
XmiI	GTMKAC	3 cut(s)	108, 1098, 1996
XmnI	GAANNNNTTC	1 cut(s)	2096
Zsp2I	ATGCAT	1 cut(s)	1696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.