Rmu_sc0003418.1_g000007

Subtilisin-like serine endopeptidase family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003418.1
OG0000257
Physical Location & Seq
Reverse (-)
19728 .. 21955
2228 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003418.1_g000007.1.cds

Sequence Viewer

Length: 1740 bp
atggcaaagcatagagctctccaggtttcctatgttgtccccactcttatactaaccttgagcttcttcttctgcaaagccatcgatgaaaacagaaagctccatatcgtgtacctggggtcacttcctgatagtgaggtgtactcaccattgtctcaccatcttggtatactacaaagagttgacgagagcaactccacttccaatttttttacaagaagtaattaccaaaggagtttaaatggatttgctgcatacctaattgaccgggaaagggaaaggcttggtagcatgatagaagtagtctctgtattttcaagcacaactttccaacttcaaacgacaagatcttgggactttctcggtttcaatgagaaaatccaacgaaatgacagcgttgagagtgatatcattattggtgtcactgactctggaacttggcctgattcggagtgcttcaaagacaatggttttggtcctcctcccaagaagtggaaaggtgcttgtgtaggtggcaaaaaattttcttgtaataataagctcattggtgctcggttttacaactcatcctctcagtctacaagggatgaaactggccatggaacacacactgcctcatcagcagccgggaatgctgtaaaggatgtcagcttttatgaggctatcttggctgcttttgacgatgctattgccgatggagttgatatcattacaatttcaataggaagcccggatgtaactgtactactgcagcatgatccaattgctgtcaaatctttccatgcaatggaaaaggggatacttacatcaaactcggcaggcaataatggtcctagagctagtaccgtaacaagtgtagcaccatggttacttacagttgcagcaagtactacagatcgtagaatgattgacaaggttgttcttggaaatggtacaactgtagttgaggcttcagtgaactctttccaaatgactgggacaagttttccattaatatatggaaaatatgctacaactcaatgcctagagtttgatgcttggaagtgtatacaagactgcttagaccgtgtagactttccggaacctccatgtcttgcccacacgccactggtgcagcagcatatgtttaagagttccaccctgattggtctccagcagccatcatctcttatgactacagcttctcccatgaattttacctacaatgattataatgccgctgctgaatttgcttgtggatctggacatatcaatcctgtcaaagctatagacccggggcttgtatatgaagcttctaaggaagactacataaagttgctctgcttggtcttaaaccagaccagtgttagacttatatcaggagataacagcacttgctctacaagctctgacaaaggatctttacatgatcaaaattacccatcgctgacagctgctgtcacaccaaagaaacctttttcattcaaatttcacagaaaagttcagaatgttggccttgcaaactccacctacaaggccaaaatattcgccggcaactctgctgatgaagctgacatcaaagtggtgcctgaagtcctttccttcaagtgcttgaatgaagagaagactttcgatgtgactgttgttggaaaaggtttgtcagaagaagtacaatcacatgtctctgcatcgctggtgtggtctgatgggattcatagcattagaagtccgattctcatccacagaagttttcttaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Inhibitor_I9 PA Peptidase_S8

Protein Analysis

579

Amino Acids

63.27

Weight (kDa)

6.25

Isoelectric Point (pI)

34.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000257)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46840 AT3G46850 AT5G58820 AT5G58830 AT5G58840 AT5G58840 AT5G58840 AT5G59090 AT5G59090 AT5G59090 AT5G59100 AT5G59120 AT5G59130 AT5G59130 AT5G59130 AT5G59130 AT5G59190
fragaria_vesca FvH4_3g37170 FvH4_7g02830 FvH4_7g02840
malus_domestica MD02G1288900.v1.1 MD02G1289100.v1.1 MD02G1289300.v1.1 MD02G1289400.v1.1 MD02G1289500.v1.1 MD03G1083800.v1.1 MD03G1084000.v1.1 MD07G1037500.v1.1 MD07G1037600.v1.1 MD07G1037700.v1.1 MD07G1039300.v1.1 MD11G1091900.v1.1 MD11G1092000.v1.1
prunus_persica Prupe.2G032800_v2.0.a1 Prupe.2G033000_v2.0.a1 Prupe.2G033100_v2.0.a1 Prupe.2G035100_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067700_v2.0.a1 Prupe.6G067800_v2.0.a1
pyrus_communis pycom02g24440 pycom02g24470 pycom02g24480 pycom02g24500 pycom02g24510 pycom03g06650 pycom07g02730 pycom11g07710 pycom11g07720
rosa_chinensis RchiOBHm_Chr1g0323281 RchiOBHm_Chr1g0323291 RchiOBHm_Chr1g0323311 RchiOBHm_Chr1g0323341 RchiOBHm_Chr1g0323351 RchiOBHm_Chr1g0323371 RchiOBHm_Chr1g0323431 RchiOBHm_Chr1g0323461 RchiOBHm_Chr1g0324031 RchiOBHm_Chr5g0066891 RchiOBHm_Chr5g0066901
rosa_laevigata RLG00000030004 RLG00000030235 RLG00000030328 RLG00000030329 RLG00000030334 RLG00000030336 RLG00000030337 RLG00000030338 RLG00000030339 RLG00000030340 RLG00000035885 RLG00000035886 RLG00000035888 RLG00000035890
rosa_multiflora Rmu_co8481685.1_g000001 Rmu_co8485349.1_g000001 Rmu_sc0000605.1_g000061 Rmu_sc0000804.1_g000004 Rmu_sc0000804.1_g000008 Rmu_sc0002263.1_g000074 Rmu_sc0002263.1_g000076 Rmu_sc0002263.1_g000077 Rmu_sc0003418.1_g000005 Rmu_sc0003418.1_g000007 Rmu_sc0003418.1_g000008 Rmu_sc0008378.1_g000013 Rmu_sc0010151.1_g000012
rosa_roxburghii Rroxscaffold_1G00014220 Rroxscaffold_1G00014230 Rroxscaffold_4G00325970 Rroxscaffold_4G00326160 Rroxscaffold_4G00326570 Rroxscaffold_4G00326580 Rroxscaffold_4G00326650 Rroxscaffold_4G00326670 Rroxscaffold_4G00326680 Rroxscaffold_4G00326700
rosa_rugosa Rorug01G0037300 Rorug01G0037400 Rorug01G0037600 Rorug01G0037700 Rorug01G0037800 Rorug01G0037800 Rorug01G0042100 Rorug01G0065000 Rorug05G0379300 Rorug05G0379400
rosa_samantha Rh1AG054700 Rh1AG054900 Rh1AG055000 Rh1AG055200 Rh1AG055300 Rh1BG047500 Rh1CG055800 Rh1CG056000 Rh1CG061400 Rh1DG059900 Rh1DG060200 Rh5AG439100 Rh5AG439200 Rh5BG455900 Rh5CG478000 Rh5CG478300
rosa_wichuraiana Rw1G004750 Rw1G004760 Rw1G004770 Rw1G004790 Rw1G005080 Rw1G006510 Rw5G041060 Rw5G041070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1212
AccB1I GGYRCC 1 cut(s) 1564
AccB7I CCANNNNNTGG 2 cut(s) 492, 787
AccI GTMKAC 4 cut(s) 169, 578, 1048, 1071
AccIII TCCGGA 1 cut(s) 1078
AciI CCGC 1 cut(s) 1218
AclWI GGATC 3 cut(s) 752, 1246, 1405
AcoI YGGCCR 1 cut(s) 595
AcsI RAATTY 4 cut(s) 521, 1192, 1226, 1466
AcuI CTGAAG 2 cut(s) 936, 1590
AfaI GTAC 7 cut(s) 113, 143, 744, 844, 889, 934, 1650
AfiI CCNNNNNNNGG 3 cut(s) 274, 492, 787
AflIII ACRYGT 1 cut(s) 1657
AgsI TTSAA 8 cut(s) 318, 338, 370, 460, 720, 1465, 1585, 1594
AjnI CCWGG 2 cut(s) 21, 114
Alw21I GWGCWC 2 cut(s) 19, 553
Alw26I GTCTC 4 cut(s) 159, 310, 1154, 1666
AlwI GGATC 3 cut(s) 752, 1246, 1405
AlwNI CAGNNNCTG 1 cut(s) 1436
Ama87I CYCGRG 1 cut(s) 1273
Aor13HI TCCGGA 1 cut(s) 1078
AoxI GGCC 4 cut(s) 440, 595, 1492, 1515
ApoI RAATTY 4 cut(s) 521, 1192, 1226, 1466
ArsI GACNNNNNNTTYG 2 cut(s) 455, 487
AseI ATTAAT 1 cut(s) 992
Asp700I GAANNNNTTC 2 cut(s) 962, 1607
AspS9I GGNCC 2 cut(s) 476, 830
AsuC2I CCSGG 5 cut(s) 269, 628, 731, 1274, 1275
AsuHPI GGTGA 2 cut(s) 138, 149
AvaI CYCGRG 1 cut(s) 1273
AvaII GGWCC 2 cut(s) 476, 830
BaeI ACNNNNGTAYC 2 cut(s) 924, 957
BalI TGGCCA 1 cut(s) 597
BanI GGYRCC 1 cut(s) 1564
BanII GRGCYC 1 cut(s) 19
BbsI GAAGAC 2 cut(s) 1308, 1610
Bbv12I GWGCWC 2 cut(s) 19, 553
BccI CCATC 6 cut(s) 89, 168, 689, 1168, 1429, 1679
BcgI CGANNNNNNTGC 4 cut(s) 64, 98, 671, 705
BciT130I CCWGG 2 cut(s) 23, 116
BciVI GTATCC 1 cut(s) 792
BclI TGATCA 1 cut(s) 1408
BcnI CCSGG 5 cut(s) 269, 628, 731, 1274, 1275
BcoDI GTCTC 4 cut(s) 159, 310, 1154, 1666
BfaI CTAG 3 cut(s) 834, 840, 1025
BfmI CTRYAG 5 cut(s) 749, 891, 939, 1176, 1266
BfuI GTATCC 1 cut(s) 792
BglII AGATCT 1 cut(s) 347
BmcAI AGTACT 1 cut(s) 889
Bme1390I CCNGG 7 cut(s) 23, 116, 269, 628, 731, 1274, 1275
Bme18I GGWCC 2 cut(s) 476, 830
BmeT110I CYCGRG 1 cut(s) 1273
BmgT120I GGNCC 2 cut(s) 476, 830
BmiI GGNNCC 2 cut(s) 1083, 1566
BmrFI CCNGG 7 cut(s) 23, 116, 269, 628, 731, 1274, 1275
BmrI ACTGGG 1 cut(s) 984
BmsI GCATC 3 cut(s) 673, 1024, 1676
BmuI ACTGGG 1 cut(s) 984
BpiI GAAGAC 2 cut(s) 1308, 1610
BplI GAGNNNNNCTC 4 cut(s) 128, 160, 179, 211
BpmI CTGGAG 2 cut(s) 5, 1136
BpuEI CTTGAG 1 cut(s) 79
BpuMI CCSGG 5 cut(s) 269, 628, 731, 1274, 1275
Bsa29I ATCGAT 1 cut(s) 84
BsaBI GATNNNNATC 1 cut(s) 1715
BsaI GGTCTC 1 cut(s) 1154
BsaJI CCNNGG 5 cut(s) 115, 598, 863, 1273, 1274
BsaWI WCCGGW 1 cut(s) 1078
BsaXI ACNNNNNCTCC 2 cut(s) 1168, 1198
Bsc4I CCNNNNNNNGG 3 cut(s) 274, 492, 787
Bse118I RCCGGY 1 cut(s) 1529
Bse1I ACTGG 4 cut(s) 598, 979, 1113, 1341
Bse3DI GCAATG 1 cut(s) 792
Bse8I GATNNNNATC 1 cut(s) 1715
BseAI TCCGGA 1 cut(s) 1078
BseBI CCWGG 2 cut(s) 23, 116
BseCI ATCGAT 1 cut(s) 84
BseDI CCNNGG 5 cut(s) 115, 598, 863, 1273, 1274
BseGI GGATG 5 cut(s) 566, 592, 649, 739, 1716
BseJI GATNNNNATC 1 cut(s) 1715
BseLI CCNNNNNNNGG 3 cut(s) 274, 492, 787
BseMI GCAATG 1 cut(s) 792
BseMII CTCAG 1 cut(s) 587
BseNI ACTGG 4 cut(s) 598, 979, 1113, 1341
BseRI GAGGAG 1 cut(s) 471
BsgI GTGCAG 1 cut(s) 1133
BshFI GGCC 4 cut(s) 442, 597, 1494, 1517
BshNI GGYRCC 1 cut(s) 1564
BshVI ATCGAT 1 cut(s) 84
BsiHKAI GWGCWC 2 cut(s) 19, 553
BsiHKCI CYCGRG 1 cut(s) 1273
BsiSI CCGG 6 cut(s) 268, 627, 731, 1079, 1274, 1530
BslFI GGGAC 3 cut(s) 23, 368, 991
BslI CCNNNNNNNGG 3 cut(s) 274, 492, 787
BsmAI GTCTC 4 cut(s) 159, 310, 1154, 1666
BsmFI GGGAC 3 cut(s) 23, 368, 991
BsmI GAATGC 1 cut(s) 637
BsnI GGCC 4 cut(s) 442, 597, 1494, 1517
Bso31I GGTCTC 1 cut(s) 1154
BsoBI CYCGRG 1 cut(s) 1273
Bsp1286I GDGCHC 2 cut(s) 19, 553
Bsp13I TCCGGA 1 cut(s) 1078
Bsp143I GATC 6 cut(s) 347, 757, 895, 1238, 1397, 1408
Bsp19I CCATGG 2 cut(s) 598, 863
BspACI CCGC 1 cut(s) 1218
BspANI GGCC 4 cut(s) 442, 597, 1494, 1517
BspCNI CTCAG 1 cut(s) 586
BspDI ATCGAT 1 cut(s) 84
BspEI TCCGGA 1 cut(s) 1078
BspLI GGNNCC 2 cut(s) 1083, 1566
BspMAI CTGCAG 1 cut(s) 753
BspPI GGATC 3 cut(s) 752, 1246, 1405
BspT107I GGYRCC 1 cut(s) 1564
BspTNI GGTCTC 1 cut(s) 1154
BsrDI GCAATG 1 cut(s) 792
BsrFI RCCGGY 1 cut(s) 1529
BsrI ACTGG 4 cut(s) 598, 979, 1113, 1341
BssAI RCCGGY 1 cut(s) 1529
BssECI CCNNGG 5 cut(s) 115, 598, 863, 1273, 1274
BssMI GATC 6 cut(s) 347, 757, 895, 1238, 1397, 1408
BssNAI GTATAC 2 cut(s) 170, 1049
BssT1I CCWWGG 2 cut(s) 598, 863
Bst1107I GTATAC 2 cut(s) 170, 1049
Bst2UI CCWGG 2 cut(s) 23, 116
Bst4CI ACNGT 6 cut(s) 742, 847, 877, 940, 1067, 1621
Bst6I CTCTTC 1 cut(s) 1593
BstC8I GCNNGC 2 cut(s) 820, 1531
BstDEI CTNAG 3 cut(s) 573, 1060, 1296
BstDSI CCRYGG 2 cut(s) 598, 863
BstF5I GGATG 5 cut(s) 566, 592, 649, 739, 1716
BstKTI GATC 6 cut(s) 350, 760, 898, 1241, 1400, 1411
BstMAI GTCTC 4 cut(s) 159, 310, 1154, 1666
BstMBI GATC 6 cut(s) 347, 757, 895, 1238, 1397, 1408
BstMWI GCNNNNNNNGC 7 cut(s) 620, 632, 668, 1111, 1229, 1383, 1547
BstNI CCWGG 2 cut(s) 23, 116
BstNSI RCATGY 1 cut(s) 1661
BstSCI CCNGG 7 cut(s) 21, 114, 267, 626, 729, 1272, 1273
BstSFI CTRYAG 5 cut(s) 749, 891, 939, 1176, 1266
BstV2I GAAGAC 2 cut(s) 1308, 1610
BstX2I RGATCY 3 cut(s) 347, 1238, 1397
BstXI CCANNNNNNTGG 1 cut(s) 974
BstYI RGATCY 3 cut(s) 347, 1238, 1397
BstZ17I GTATAC 2 cut(s) 170, 1049
Bsu15I ATCGAT 1 cut(s) 84
BsuI GTATCC 1 cut(s) 792
BsuRI GGCC 4 cut(s) 442, 597, 1494, 1517
BsuTUI ATCGAT 1 cut(s) 84
BtgI CCRYGG 2 cut(s) 598, 863
BtgZI GCGATG 2 cut(s) 1407, 1653
BtsCI GGATG 5 cut(s) 566, 592, 649, 739, 1716
BtsI GCAGTG 1 cut(s) 609
BtsIMutI CAGTG 5 cut(s) 423, 609, 960, 1106, 1348
Cac8I GCNNGC 2 cut(s) 820, 1531
CaiI CAGNNNCTG 1 cut(s) 1436
Cfr10I RCCGGY 1 cut(s) 1529
Cfr13I GGNCC 2 cut(s) 476, 830
Cfr9I CCCGGG 1 cut(s) 1273
ClaI ATCGAT 1 cut(s) 84
Csp6I GTAC 7 cut(s) 112, 142, 743, 843, 888, 933, 1649
CspCI CAANNNNNGTGG 2 cut(s) 1126, 1161
CviAII CATG 9 cut(s) 292, 599, 755, 782, 864, 1089, 1189, 1406, 1658
CviQI GTAC 7 cut(s) 112, 142, 743, 843, 888, 933, 1649
DdeI CTNAG 3 cut(s) 573, 1060, 1296
DpnI GATC 6 cut(s) 349, 759, 897, 1240, 1399, 1410
DpnII GATC 6 cut(s) 347, 757, 895, 1238, 1397, 1408
DraI TTTAAA 1 cut(s) 240
EaeI YGGCCR 1 cut(s) 595
Eam1104I CTCTTC 1 cut(s) 1593
EarI CTCTTC 1 cut(s) 1593
Ecl136II GAGCTC 1 cut(s) 17
Eco130I CCWWGG 2 cut(s) 598, 863
Eco24I GRGCYC 1 cut(s) 19
Eco31I GGTCTC 1 cut(s) 1154
Eco32I GATATC 2 cut(s) 409, 706
Eco47I GGWCC 2 cut(s) 476, 830
Eco53kI GAGCTC 1 cut(s) 17
Eco57I CTGAAG 2 cut(s) 936, 1590
Eco88I CYCGRG 1 cut(s) 1273
EcoICRI GAGCTC 1 cut(s) 17
EcoRII CCWGG 2 cut(s) 21, 114
EcoRV GATATC 2 cut(s) 409, 706
EcoT14I CCWWGG 2 cut(s) 598, 863
EcoT38I GRGCYC 1 cut(s) 19
ErhI CCWWGG 2 cut(s) 598, 863
FaeI CATG 9 cut(s) 295, 602, 758, 785, 867, 1092, 1192, 1409, 1661
FalI AAGNNNNNCTT 2 cut(s) 310, 342
FaqI GGGAC 3 cut(s) 23, 368, 991
FatI CATG 9 cut(s) 291, 598, 754, 781, 863, 1088, 1188, 1405, 1657
FauNDI CATATG 1 cut(s) 1122
FbaI TGATCA 1 cut(s) 1408
FblI GTMKAC 4 cut(s) 169, 578, 1048, 1071
FokI GGATG 5 cut(s) 553, 599, 656, 746, 1703
FriOI GRGCYC 1 cut(s) 19
FspBI CTAG 3 cut(s) 834, 840, 1025
GsuI CTGGAG 2 cut(s) 5, 1136
HaeIII GGCC 4 cut(s) 442, 597, 1494, 1517
HapII CCGG 6 cut(s) 268, 627, 731, 1079, 1274, 1530
Hin1II CATG 9 cut(s) 295, 602, 758, 785, 867, 1092, 1192, 1409, 1661
HincII GTYRAC 1 cut(s) 184
HindII GTYRAC 1 cut(s) 184
HindIII AAGCTT 1 cut(s) 1290
HinfI GANTC 4 cut(s) 428, 446, 1690, 1711
HpaII CCGG 6 cut(s) 268, 627, 731, 1079, 1274, 1530
HphI GGTGA 2 cut(s) 138, 149
Hpy166II GTNNAC 8 cut(s) 112, 142, 170, 184, 579, 958, 1049, 1072
Hpy188I TCNGA 6 cut(s) 451, 1390, 1485, 1642, 1684, 1710
Hpy188III TCNNGA 5 cut(s) 128, 432, 1079, 1242, 1359
Hpy8I GTNNAC 8 cut(s) 112, 142, 170, 184, 579, 958, 1049, 1072
HpyAV CCTTC 1 cut(s) 1591
HpyCH4III ACNGT 6 cut(s) 742, 847, 877, 940, 1067, 1621
HpyCH4V TGCA 8 cut(s) 75, 254, 751, 785, 881, 1114, 1499, 1667
HpyF10VI GCNNNNNNNGC 7 cut(s) 620, 632, 668, 1111, 1229, 1383, 1547
HpyF3I CTNAG 3 cut(s) 573, 1060, 1296
Hsp92II CATG 9 cut(s) 295, 602, 758, 785, 867, 1092, 1192, 1409, 1661
Kpn2I TCCGGA 1 cut(s) 1078
KroI GCCGGC 1 cut(s) 1529
KroNI GCCGGC 1 cut(s) 1531
Ksp22I TGATCA 1 cut(s) 1408
Kzo9I GATC 6 cut(s) 347, 757, 895, 1238, 1397, 1408
LmnI GCTCC 1 cut(s) 105
LweI GCATC 3 cut(s) 673, 1024, 1676
MaeI CTAG 3 cut(s) 834, 840, 1025
MaeIII GTNAC 7 cut(s) 120, 421, 736, 847, 867, 1438, 1615
MalI GATC 6 cut(s) 349, 759, 897, 1240, 1399, 1410
MboI GATC 6 cut(s) 347, 757, 895, 1238, 1397, 1408
MboII GAAGA 6 cut(s) 58, 61, 1313, 1610, 1615, 1655
MfeI CAATTG 1 cut(s) 762
MflI RGATCY 3 cut(s) 347, 1238, 1397
MhlI GDGCHC 2 cut(s) 19, 553
MlsI TGGCCA 1 cut(s) 597
MluNI TGGCCA 1 cut(s) 597
MlyI GAGTC 1 cut(s) 422
MmeI TCCRAC 3 cut(s) 355, 406, 1606
MnlI CCTC 8 cut(s) 130, 489, 492, 580, 625, 652, 940, 1095
Mox20I TGGCCA 1 cut(s) 597
MroI TCCGGA 1 cut(s) 1078
MroNI GCCGGC 1 cut(s) 1529
MroXI GAANNNNTTC 2 cut(s) 962, 1607
MscI TGGCCA 1 cut(s) 597
MseI TTAA 6 cut(s) 239, 992, 1128, 1331, 1734, 1738
MslI CAYNNNNRTG 1 cut(s) 1559
Msp20I TGGCCA 1 cut(s) 597
MspA1I CMGCKG 2 cut(s) 1220, 1433
MspI CCGG 6 cut(s) 268, 627, 731, 1079, 1274, 1530
MspR9I CCNGG 7 cut(s) 23, 116, 269, 628, 731, 1274, 1275
MunI CAATTG 1 cut(s) 762
Mva1269I GAATGC 1 cut(s) 637
MvaI CCWGG 2 cut(s) 23, 116
MwoI GCNNNNNNNGC 7 cut(s) 620, 632, 668, 1111, 1229, 1383, 1547
NaeI GCCGGC 1 cut(s) 1531
NciI CCSGG 5 cut(s) 269, 628, 731, 1274, 1275
NcoI CCATGG 2 cut(s) 598, 863
NdeI CATATG 1 cut(s) 1122
NdeII GATC 6 cut(s) 347, 757, 895, 1238, 1397, 1408
NgoMIV GCCGGC 1 cut(s) 1529
NlaIII CATG 9 cut(s) 295, 602, 758, 785, 867, 1092, 1192, 1409, 1661
NlaIV GGNNCC 2 cut(s) 1083, 1566
NmeAIII GCCGAG 1 cut(s) 794
NmuCI GTSAC 4 cut(s) 120, 421, 1438, 1615
NspI RCATGY 1 cut(s) 1661
PacI TTAATTAA 1 cut(s) 1738
PciI ACATGT 1 cut(s) 1657
PctI GAATGC 1 cut(s) 637
PdiI GCCGGC 1 cut(s) 1531
PdmI GAANNNNTTC 2 cut(s) 962, 1607
PfeI GAWTC 3 cut(s) 446, 1690, 1711
PflMI CCANNNNNTGG 2 cut(s) 492, 787
PleI GAGTC 1 cut(s) 422
PpsI GAGTC 1 cut(s) 422
PscI ACATGT 1 cut(s) 1657
PshBI ATTAAT 1 cut(s) 992
PsiI TTATAA 1 cut(s) 1212
Psp124BI GAGCTC 1 cut(s) 19
Psp6I CCWGG 2 cut(s) 21, 114
PspGI CCWGG 2 cut(s) 21, 114
PspN4I GGNNCC 2 cut(s) 1083, 1566
PspPI GGNCC 2 cut(s) 476, 830
PstI CTGCAG 1 cut(s) 753
PstNI CAGNNNCTG 1 cut(s) 1436
PsuI RGATCY 3 cut(s) 347, 1238, 1397
PvuII CAGCTG 1 cut(s) 1433
RsaI GTAC 7 cut(s) 113, 143, 744, 844, 889, 934, 1650
RsaNI GTAC 7 cut(s) 112, 142, 743, 843, 888, 933, 1649
RseI CAYNNNNRTG 1 cut(s) 1559
SacI GAGCTC 1 cut(s) 19
SaqAI TTAA 6 cut(s) 239, 992, 1128, 1331, 1734, 1738
Sau3AI GATC 6 cut(s) 347, 757, 895, 1238, 1397, 1408
Sau96I GGNCC 2 cut(s) 476, 830
ScaI AGTACT 1 cut(s) 889
SchI GAGTC 1 cut(s) 422
ScrFI CCNGG 7 cut(s) 23, 116, 269, 628, 731, 1274, 1275
SduI GDGCHC 2 cut(s) 19, 553
SfaNI GCATC 3 cut(s) 673, 1024, 1676
SfcI CTRYAG 5 cut(s) 749, 891, 939, 1176, 1266
SinI GGWCC 2 cut(s) 476, 830
SmaI CCCGGG 1 cut(s) 1275
SmiMI CAYNNNNRTG 1 cut(s) 1559
SmlI CTYRAG 1 cut(s) 58
SmoI CTYRAG 1 cut(s) 58
SsiI CCGC 1 cut(s) 1218
SspI AATATT 1 cut(s) 1524
SspMI CTAG 3 cut(s) 834, 840, 1025
SstI GAGCTC 1 cut(s) 19
StyD4I CCNGG 7 cut(s) 21, 114, 267, 626, 729, 1272, 1273
StyI CCWWGG 2 cut(s) 598, 863
TaaI ACNGT 6 cut(s) 742, 847, 877, 940, 1067, 1621
TaqI TCGA 2 cut(s) 84, 1611
TatI WGTACW 4 cut(s) 141, 742, 887, 1648
TauI GCSGC 1 cut(s) 1220
TfiI GAWTC 3 cut(s) 446, 1690, 1711
Tru1I TTAA 6 cut(s) 239, 992, 1128, 1331, 1734, 1738
Tru9I TTAA 6 cut(s) 239, 992, 1128, 1331, 1734, 1738
TscAI CASTG 5 cut(s) 430, 616, 960, 1113, 1348
TseFI GTSAC 4 cut(s) 120, 421, 1438, 1615
Tsp45I GTSAC 4 cut(s) 120, 421, 1438, 1615
TspDTI ATGAA 8 cut(s) 102, 603, 1205, 1302, 1449, 1560, 1611, 1682
TspMI CCCGGG 1 cut(s) 1273
TspRI CASTG 5 cut(s) 430, 616, 960, 1113, 1348
Van91I CCANNNNNTGG 2 cut(s) 492, 787
VpaK11BI GGWCC 2 cut(s) 476, 830
VspI ATTAAT 1 cut(s) 992
XapI RAATTY 4 cut(s) 521, 1192, 1226, 1466
XceI RCATGY 1 cut(s) 1661
XmaI CCCGGG 1 cut(s) 1273
XmiI GTMKAC 4 cut(s) 169, 578, 1048, 1071
XmnI GAANNNNTTC 2 cut(s) 962, 1607
XspI CTAG 3 cut(s) 834, 840, 1025
ZrmI AGTACT 1 cut(s) 889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.