RLG00000035886

Subtilisin-like serine endopeptidase family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000257
Physical Location & Seq
Forward (+)
73129191 .. 73130750
1560 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035886

Sequence Viewer

Length: 1002 bp
ATGGGGGTGTCCCTGCAGCAAGAATTGCAGTATATAAAGCTTGCACTCCATATTGTGAATCACACAATATTTTGGCTGCTTTTGACGATGCTATTGCTGATGGTGTTGACAATCATTACAATTTCAATTGGATTTGGTATGATACTAGAGTTTGATGGGGATCCTATTGCAATTGGTGCTTTTCATGCAATGGATAAAGGGATACTAACCTCACAATCTGCTGGTAACTATGGTCCTTGGGGTGCTTCTGTGTCAAGTGTAGCACCATGGATACTGACAGTTGCAGCTAGTAGCACAGATCGGCCGATCGTTGACAAGGTTGTTCTTGGAAATGGTAGTATACTAGTGGGAAATTCTGTTAACACTTTCACATTAAATGGAACTAGTTTTCCTCTGATACATGGAAAAGATGTTTCACGTAATTGCACTGAACGAGACGCTAGTGATCTAGTAAAGGGAAAGATTGTGTTATGTGATGACTACATTAATGAAAATCTTGAGGCATATAAAGCTGGCGCACTAGGTTCAGTTTTATATAATTATCGCAATGCTGATGCTCTTTCTTTGGTTCTTCCAGTGGCTGCAGCGACTTTAAATGACGCAAATTGTAGTGTGCTCATAGACCGTCGAGCAAATATATTGAAAAGTGAAGTCATAAAAGCTGCTGCACCTATACTCACTCCCTTCTCTTCACGTGGACCGAATAGAGTTTTACCTGATATTAATAAGCCAGACATTAGTGCCCCGGGGGCACAAATATTGGCTGCATATTCACCTGTTGCTCCTATCTCATCTATTCCTGTACCTGGCGACTTTAGGCGTGTAAAATACAATATACAATCTGGAACCTCCATGGCTTGCCCCCACGCTGCTGGTGCAGCTGCATATGTTAAAACAATCCACCCTGATTGGTCTCCGGCAGCCATCAAATCATCTCTTATGACTACTGCTTGGCCCATGAATAGTACCATTACTGACCCTTCTGGTGAATTCGGCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Inhibitor_I9 PA Peptidase_S8

Protein Analysis

334

Amino Acids

35.38

Weight (kDa)

6.29

Isoelectric Point (pI)

37.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S8 PF00082 57 - 332 3.7e-23 Subtilase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000257)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46840 AT3G46850 AT5G58820 AT5G58830 AT5G58840 AT5G58840 AT5G58840 AT5G59090 AT5G59090 AT5G59090 AT5G59100 AT5G59120 AT5G59130 AT5G59130 AT5G59130 AT5G59130 AT5G59190
fragaria_vesca FvH4_3g37170 FvH4_7g02830 FvH4_7g02840
malus_domestica MD02G1288900.v1.1 MD02G1289100.v1.1 MD02G1289300.v1.1 MD02G1289400.v1.1 MD02G1289500.v1.1 MD03G1083800.v1.1 MD03G1084000.v1.1 MD07G1037500.v1.1 MD07G1037600.v1.1 MD07G1037700.v1.1 MD07G1039300.v1.1 MD11G1091900.v1.1 MD11G1092000.v1.1
prunus_persica Prupe.2G032800_v2.0.a1 Prupe.2G033000_v2.0.a1 Prupe.2G033100_v2.0.a1 Prupe.2G035100_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067700_v2.0.a1 Prupe.6G067800_v2.0.a1
pyrus_communis pycom02g24440 pycom02g24470 pycom02g24480 pycom02g24500 pycom02g24510 pycom03g06650 pycom07g02730 pycom11g07710 pycom11g07720
rosa_chinensis RchiOBHm_Chr1g0323281 RchiOBHm_Chr1g0323291 RchiOBHm_Chr1g0323311 RchiOBHm_Chr1g0323341 RchiOBHm_Chr1g0323351 RchiOBHm_Chr1g0323371 RchiOBHm_Chr1g0323431 RchiOBHm_Chr1g0323461 RchiOBHm_Chr1g0324031 RchiOBHm_Chr5g0066891 RchiOBHm_Chr5g0066901
rosa_laevigata RLG00000030004 RLG00000030235 RLG00000030328 RLG00000030329 RLG00000030334 RLG00000030336 RLG00000030337 RLG00000030338 RLG00000030339 RLG00000030340 RLG00000035885 RLG00000035886 RLG00000035888 RLG00000035890
rosa_multiflora Rmu_co8481685.1_g000001 Rmu_co8485349.1_g000001 Rmu_sc0000605.1_g000061 Rmu_sc0000804.1_g000004 Rmu_sc0000804.1_g000008 Rmu_sc0002263.1_g000074 Rmu_sc0002263.1_g000076 Rmu_sc0002263.1_g000077 Rmu_sc0003418.1_g000005 Rmu_sc0003418.1_g000007 Rmu_sc0003418.1_g000008 Rmu_sc0008378.1_g000013 Rmu_sc0010151.1_g000012
rosa_roxburghii Rroxscaffold_1G00014220 Rroxscaffold_1G00014230 Rroxscaffold_4G00325970 Rroxscaffold_4G00326160 Rroxscaffold_4G00326570 Rroxscaffold_4G00326580 Rroxscaffold_4G00326650 Rroxscaffold_4G00326670 Rroxscaffold_4G00326680 Rroxscaffold_4G00326700
rosa_rugosa Rorug01G0037300 Rorug01G0037400 Rorug01G0037600 Rorug01G0037700 Rorug01G0037800 Rorug01G0037800 Rorug01G0042100 Rorug01G0065000 Rorug05G0379300 Rorug05G0379400
rosa_samantha Rh1AG054700 Rh1AG054900 Rh1AG055000 Rh1AG055200 Rh1AG055300 Rh1BG047500 Rh1CG055800 Rh1CG056000 Rh1CG061400 Rh1DG059900 Rh1DG060200 Rh5AG439100 Rh5AG439200 Rh5BG455900 Rh5CG478000 Rh5CG478300
rosa_wichuraiana Rw1G004750 Rw1G004760 Rw1G004770 Rw1G004790 Rw1G005080 Rw1G006510 Rw5G041060 Rw5G041070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 340
AclWI GGATC 2 cut(s) 155, 168
AcoI YGGCCR 1 cut(s) 302
AcsI RAATTY 2 cut(s) 352, 989
AcvI CACGTG 1 cut(s) 695
AfaI GTAC 2 cut(s) 804, 967
AfiI CCNNNNNNNGG 1 cut(s) 806
AgsI TTSAA 2 cut(s) 126, 643
AhlI ACTAGT 2 cut(s) 343, 383
AjnI CCWGG 1 cut(s) 805
AloI GAACNNNNNNTCC 2 cut(s) 373, 405
AluBI AGCT 5 cut(s) 40, 287, 512, 662, 881
AluI AGCT 5 cut(s) 40, 287, 512, 662, 881
Alw21I GWGCWC 1 cut(s) 618
Alw26I GTCTC 2 cut(s) 429, 918
AlwI GGATC 2 cut(s) 155, 168
AlwNI CAGNNNCTG 1 cut(s) 581
Ama87I CYCGRG 1 cut(s) 745
AoxI GGCC 2 cut(s) 302, 953
ApoI RAATTY 2 cut(s) 352, 989
AseI ATTAAT 2 cut(s) 486, 723
AspLEI GCGC 1 cut(s) 518
AspS9I GGNCC 3 cut(s) 233, 698, 954
AsuC2I CCSGG 2 cut(s) 746, 747
AsuHPI GGTGA 2 cut(s) 765, 998
AvaI CYCGRG 1 cut(s) 745
AvaII GGWCC 2 cut(s) 233, 698
BaeGI GKGCMC 2 cut(s) 745, 754
BaeI ACNNNNGTAYC 2 cut(s) 134, 167
BamHI GGATCC 1 cut(s) 160
BbrPI CACGTG 1 cut(s) 695
Bbv12I GWGCWC 1 cut(s) 618
BccI CCATC 3 cut(s) 94, 149, 932
BcgI CGANNNNNNTGC 2 cut(s) 76, 110
BciT130I CCWGG 1 cut(s) 807
BciVI GTATCC 2 cut(s) 195, 264
BcnI CCSGG 2 cut(s) 746, 747
BcoDI GTCTC 2 cut(s) 429, 918
BcuI ACTAGT 2 cut(s) 343, 383
BfaI CTAG 7 cut(s) 146, 288, 344, 384, 441, 449, 521
BfmI CTRYAG 2 cut(s) 14, 582
BfuI GTATCC 2 cut(s) 195, 264
BglI GCCNNNNNGGC 1 cut(s) 749
Bme1390I CCNGG 3 cut(s) 746, 747, 807
Bme18I GGWCC 2 cut(s) 233, 698
BmeT110I CYCGRG 1 cut(s) 745
BmgT120I GGNCC 3 cut(s) 233, 698, 954
BmiI GGNNCC 2 cut(s) 162, 847
BmrFI CCNGG 3 cut(s) 746, 747, 807
BmsI GCATC 2 cut(s) 78, 544
BpuEI CTTGAG 1 cut(s) 518
BpuMI CCSGG 2 cut(s) 746, 747
BsaAI YACGTR 2 cut(s) 419, 695
BsaBI GATNNNNATC 1 cut(s) 159
BsaI GGTCTC 1 cut(s) 918
BsaJI CCNNGG 6 cut(s) 236, 266, 744, 745, 746, 852
Bsc4I CCNNNNNNNGG 1 cut(s) 806
Bse1I ACTGG 1 cut(s) 575
Bse3DI GCAATG 2 cut(s) 195, 553
Bse8I GATNNNNATC 1 cut(s) 159
BseBI CCWGG 1 cut(s) 807
BseDI CCNNGG 6 cut(s) 236, 266, 744, 745, 746, 852
BseJI GATNNNNATC 1 cut(s) 159
BseLI CCNNNNNNNGG 1 cut(s) 806
BseMI GCAATG 2 cut(s) 195, 553
BseNI ACTGG 1 cut(s) 575
BseSI GKGCMC 2 cut(s) 745, 754
BseX3I CGGCCG 1 cut(s) 302
BsgI GTGCAG 2 cut(s) 651, 897
Bsh1285I CGRYCG 2 cut(s) 305, 309
BshFI GGCC 2 cut(s) 304, 955
BsiEI CGRYCG 2 cut(s) 305, 309
BsiHKAI GWGCWC 1 cut(s) 618
BsiHKCI CYCGRG 1 cut(s) 745
BsiSI CCGG 2 cut(s) 746, 917
BslI CCNNNNNNNGG 1 cut(s) 806
BsmAI GTCTC 2 cut(s) 429, 918
BsmBI CGTCTC 1 cut(s) 429
BsnI GGCC 2 cut(s) 304, 955
Bso31I GGTCTC 1 cut(s) 918
BsoBI CYCGRG 1 cut(s) 745
Bsp1286I GDGCHC 3 cut(s) 618, 745, 754
Bsp143I GATC 4 cut(s) 160, 298, 306, 445
Bsp19I CCATGG 2 cut(s) 266, 852
BspANI GGCC 2 cut(s) 304, 955
BspLI GGNNCC 2 cut(s) 162, 847
BspMAI CTGCAG 2 cut(s) 18, 586
BspPI GGATC 2 cut(s) 155, 168
BspTNI GGTCTC 1 cut(s) 918
BsrDI GCAATG 2 cut(s) 195, 553
BsrI ACTGG 1 cut(s) 575
BssECI CCNNGG 6 cut(s) 236, 266, 744, 745, 746, 852
BssMI GATC 4 cut(s) 160, 298, 306, 445
BssNAI GTATAC 1 cut(s) 341
BssT1I CCWWGG 3 cut(s) 236, 266, 852
Bst1107I GTATAC 1 cut(s) 341
Bst2UI CCWGG 1 cut(s) 807
Bst4CI ACNGT 2 cut(s) 280, 626
Bst6I CTCTTC 1 cut(s) 694
BstAPI GCANNNNNTGC 2 cut(s) 25, 176
BstBAI YACGTR 2 cut(s) 419, 695
BstC8I GCNNGC 3 cut(s) 42, 514, 859
BstDSI CCRYGG 2 cut(s) 266, 852
BstHHI GCGC 1 cut(s) 518
BstKTI GATC 4 cut(s) 163, 301, 309, 448
BstMAI GTCTC 2 cut(s) 429, 918
BstMBI GATC 4 cut(s) 160, 298, 306, 445
BstMCI CGRYCG 2 cut(s) 305, 309
BstMWI GCNNNNNNNGC 7 cut(s) 25, 176, 185, 509, 749, 875, 878
BstNI CCWGG 1 cut(s) 807
BstSCI CCNGG 3 cut(s) 744, 745, 805
BstSFI CTRYAG 2 cut(s) 14, 582
BstSLI GKGCMC 2 cut(s) 745, 754
BstX2I RGATCY 1 cut(s) 160
BstXI CCANNNNNNTGG 1 cut(s) 872
BstYI RGATCY 1 cut(s) 160
BstZ17I GTATAC 1 cut(s) 341
BstZI CGGCCG 1 cut(s) 302
BsuI GTATCC 2 cut(s) 195, 264
BsuRI GGCC 2 cut(s) 304, 955
BtgI CCRYGG 2 cut(s) 266, 852
BtsIMutI CAGTG 2 cut(s) 426, 582
Cac8I GCNNGC 3 cut(s) 42, 514, 859
CaiI CAGNNNCTG 1 cut(s) 581
CfoI GCGC 1 cut(s) 518
Cfr13I GGNCC 3 cut(s) 233, 698, 954
Cfr9I CCCGGG 1 cut(s) 745
CseI GACGC 2 cut(s) 446, 608
Csp6I GTAC 2 cut(s) 803, 966
CspCI CAANNNNNGTGG 2 cut(s) 890, 925
CviAII CATG 5 cut(s) 185, 267, 401, 853, 958
CviQI GTAC 2 cut(s) 803, 966
DpnI GATC 4 cut(s) 162, 300, 308, 447
DpnII GATC 4 cut(s) 160, 298, 306, 445
DraI TTTAAA 1 cut(s) 594
EaeI YGGCCR 1 cut(s) 302
EagI CGGCCG 1 cut(s) 302
Eam1104I CTCTTC 1 cut(s) 694
EarI CTCTTC 1 cut(s) 694
EclXI CGGCCG 1 cut(s) 302
Eco130I CCWWGG 3 cut(s) 236, 266, 852
Eco31I GGTCTC 1 cut(s) 918
Eco47I GGWCC 2 cut(s) 233, 698
Eco52I CGGCCG 1 cut(s) 302
Eco72I CACGTG 1 cut(s) 695
Eco88I CYCGRG 1 cut(s) 745
EcoRI GAATTC 1 cut(s) 989
EcoRII CCWGG 1 cut(s) 805
EcoT14I CCWWGG 3 cut(s) 236, 266, 852
ErhI CCWWGG 3 cut(s) 236, 266, 852
Esp3I CGTCTC 1 cut(s) 429
FaeI CATG 5 cut(s) 188, 270, 404, 856, 961
FatI CATG 5 cut(s) 184, 266, 400, 852, 957
FauNDI CATATG 1 cut(s) 886
FblI GTMKAC 1 cut(s) 340
FspBI CTAG 7 cut(s) 146, 288, 344, 384, 441, 449, 521
GlaI GCGC 1 cut(s) 517
HaeIII GGCC 2 cut(s) 304, 955
HapII CCGG 2 cut(s) 746, 917
HgaI GACGC 2 cut(s) 446, 608
HhaI GCGC 1 cut(s) 518
Hin1II CATG 5 cut(s) 188, 270, 404, 856, 961
Hin6I GCGC 1 cut(s) 516
HinP1I GCGC 1 cut(s) 516
HincII GTYRAC 3 cut(s) 108, 313, 361
HindII GTYRAC 3 cut(s) 108, 313, 361
HindIII AAGCTT 1 cut(s) 38
HinfI GANTC 1 cut(s) 58
HpaI GTTAAC 1 cut(s) 361
HpaII CCGG 2 cut(s) 746, 917
HphI GGTGA 2 cut(s) 765, 998
Hpy166II GTNNAC 5 cut(s) 108, 313, 341, 361, 698
Hpy188I TCNGA 1 cut(s) 396
Hpy188III TCNNGA 2 cut(s) 497, 843
Hpy8I GTNNAC 5 cut(s) 108, 313, 341, 361, 698
Hpy99I CGWCG 1 cut(s) 630
HpyAV CCTTC 2 cut(s) 694, 990
HpyCH4III ACNGT 2 cut(s) 280, 626
HpyCH4IV ACGT 2 cut(s) 418, 694
HpyF10VI GCNNNNNNNGC 7 cut(s) 25, 176, 185, 509, 749, 875, 878
HpySE526I ACGT 2 cut(s) 418, 694
Hsp92II CATG 5 cut(s) 188, 270, 404, 856, 961
HspAI GCGC 1 cut(s) 516
KspAI GTTAAC 1 cut(s) 361
Kzo9I GATC 4 cut(s) 160, 298, 306, 445
LmnI GCTCC 1 cut(s) 787
LweI GCATC 2 cut(s) 78, 544
MaeI CTAG 7 cut(s) 146, 288, 344, 384, 441, 449, 521
MaeII ACGT 2 cut(s) 418, 694
MaeIII GTNAC 1 cut(s) 224
MalI GATC 4 cut(s) 162, 300, 308, 447
MboI GATC 4 cut(s) 160, 298, 306, 445
MboII GAAGA 2 cut(s) 563, 681
MfeI CAATTG 2 cut(s) 126, 171
MflI RGATCY 1 cut(s) 160
MhlI GDGCHC 3 cut(s) 618, 745, 754
MluCI AATT 9 cut(s) 23, 120, 126, 171, 352, 421, 538, 604, 989
MnlI CCTC 4 cut(s) 220, 402, 493, 859
MseI TTAA 6 cut(s) 360, 374, 486, 593, 723, 891
MspA1I CMGCKG 1 cut(s) 881
MspI CCGG 2 cut(s) 746, 917
MspR9I CCNGG 3 cut(s) 746, 747, 807
MunI CAATTG 2 cut(s) 126, 171
MvaI CCWGG 1 cut(s) 807
MwoI GCNNNNNNNGC 7 cut(s) 25, 176, 185, 509, 749, 875, 878
NciI CCSGG 2 cut(s) 746, 747
NcoI CCATGG 2 cut(s) 266, 852
NdeI CATATG 1 cut(s) 886
NdeII GATC 4 cut(s) 160, 298, 306, 445
NlaIII CATG 5 cut(s) 188, 270, 404, 856, 961
NlaIV GGNNCC 2 cut(s) 162, 847
PfeI GAWTC 1 cut(s) 58
Ple19I CGATCG 1 cut(s) 309
PmaCI CACGTG 1 cut(s) 695
PmlI CACGTG 1 cut(s) 695
Ppu21I YACGTR 2 cut(s) 419, 695
PshBI ATTAAT 2 cut(s) 486, 723
Psp6I CCWGG 1 cut(s) 805
PspCI CACGTG 1 cut(s) 695
PspGI CCWGG 1 cut(s) 805
PspN4I GGNNCC 2 cut(s) 162, 847
PspPI GGNCC 3 cut(s) 233, 698, 954
PstI CTGCAG 2 cut(s) 18, 586
PstNI CAGNNNCTG 1 cut(s) 581
PsuI RGATCY 1 cut(s) 160
PvuI CGATCG 1 cut(s) 309
PvuII CAGCTG 1 cut(s) 881
RsaI GTAC 2 cut(s) 804, 967
RsaNI GTAC 2 cut(s) 803, 966
SaqAI TTAA 6 cut(s) 360, 374, 486, 593, 723, 891
Sau3AI GATC 4 cut(s) 160, 298, 306, 445
Sau96I GGNCC 3 cut(s) 233, 698, 954
ScrFI CCNGG 3 cut(s) 746, 747, 807
SduI GDGCHC 3 cut(s) 618, 745, 754
SfaNI GCATC 2 cut(s) 78, 544
SfcI CTRYAG 2 cut(s) 14, 582
SinI GGWCC 2 cut(s) 233, 698
SmaI CCCGGG 1 cut(s) 747
SmlI CTYRAG 1 cut(s) 497
SmoI CTYRAG 1 cut(s) 497
SpeI ACTAGT 2 cut(s) 343, 383
Sse9I AATT 9 cut(s) 23, 120, 126, 171, 352, 421, 538, 604, 989
SspI AATATT 2 cut(s) 69, 759
SspMI CTAG 7 cut(s) 146, 288, 344, 384, 441, 449, 521
StyD4I CCNGG 3 cut(s) 744, 745, 805
StyI CCWWGG 3 cut(s) 236, 266, 852
TaaI ACNGT 2 cut(s) 280, 626
TaiI ACGT 2 cut(s) 421, 697
TaqI TCGA 1 cut(s) 628
TaqII GACCGA 1 cut(s) 715
TasI AATT 9 cut(s) 23, 120, 126, 171, 352, 421, 538, 604, 989
TfiI GAWTC 1 cut(s) 58
Tru1I TTAA 6 cut(s) 360, 374, 486, 593, 723, 891
Tru9I TTAA 6 cut(s) 360, 374, 486, 593, 723, 891
TscAI CASTG 2 cut(s) 433, 582
TspDTI ATGAA 3 cut(s) 173, 504, 974
TspMI CCCGGG 1 cut(s) 745
TspRI CASTG 2 cut(s) 433, 582
VpaK11BI GGWCC 2 cut(s) 233, 698
VspI ATTAAT 2 cut(s) 486, 723
XapI RAATTY 2 cut(s) 352, 989
XmaI CCCGGG 1 cut(s) 745
XmiI GTMKAC 1 cut(s) 340
XspI CTAG 7 cut(s) 146, 288, 344, 384, 441, 449, 521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.