Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000257

Physical Location & Seq

Genomic Coordinates Forward (+)

23755775 .. 23758684

Gene Structure 2910 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G58830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGTGAAACGAGCTTCCTTTTGTCTCCTCTCATGTCTCATTATATTGTTTTTGAGTTCAGTCTCAGCAATTATATATGATCCTCAAGATAAACAAGTGTATGTTGTCTATATGGGCTCACTTCCGTCTCAACCAAACTACACACCAATGTCGAATCACATAAATATTCTTCAAGAGGTCACCGGAGAAAGTTCCATAGAAGGTCGTTTGGTGAGAAGTTACAAGAGGAGTTTCAACGGTTTCTCGGCCCTACTCACTGAGTCAGAACGAGAGGGAGTAGCCGAAATGGAGGGAGTTGTGTCTGTGTTCCGGAGTAAGAACTACAAACTCCAAACGACGGCGTCTTGGGACTTCATGGGAATGAAGGAAGGTAAGAATACAAAGAGAAACTTCGCCGTAGAGAGTGATACTATTATCGGATTCATCGACAGTGGGATTTGGCCAGAATCCGAGAGCTTTTCTGATAAAGGCTTTGGTCCTCCTCCTAAGAAATGGAAAGGTGTTTGTAAAGGTGGCAAAAACTTTACTTGTAACAACAAGTTGATCGGAGCAAGAGACTACACAAGCGAAGGCACTAGGGACCTCCAAGGACATGGTACTCACACAACGTCCACAGCGGCTGGAAACGCAGTTGCGGATACAAGCTTCTTTGGAATAGGCAATGGAACAGCGAGAGGCGGTGTTCCAGCCTCTAGAGTCGCAGCTTACAAAGTCTGCACCATAACAGGGTGTAGCGATGATAACGTACTGTCTGCGTTTGATGATGCGATCGCAGACGGTGTTGACCTCATCAGCGTCTCTCTCGGGGGAGATTACCCTTCCTTATATGCAGAGGACACAATTGCGATTGGGGCTTTTCACGCTATGGCCAAAGGGATTCTCACTGTGCACTCAGCCGGTAACGCTGGTCCGAATCCGACCACAGTTGTGAGCGTAGCGCCGTGGATGTTAACGGTTGCAGCAACCACCACCAACCGTAGGTTTTTAACCAAAGTTGTTCTTGGAAATGGCAAGACACTTGTTGGGAAATCAGTGAATGCTTTTGATCTGAAAGGAAAGAAGTATCCTCTTGAGTACGGAGATTATTTGAACGAATCTCTGGTGAAAGGAAAGATCTTGGTTTCCAGATACTTAAGTGGGTCAGAAGTAGCTGTTTCATTCATAACTACAGACAACAAAGACTATGCATCTATTAGCTCTCGGCCCCTCTCTGTTTTATCACAAGATGACTTTGACTCTCTCGTCTCTTACATTAACTCCACAAGGTCCCCGCAAGGGTCTGTTCTTAAAACTGAGGCAATCTTTAATCAGTTATCTCCTAAAGTTGCTTCTTTCTCTTCCCGCGGTCCAAACACTATTGCGGTTGATATTCTTAAGCCAGATATATCAGCACCAGGAGTGGAGATTCTCGCTGCGTATTCACCTTTGAGTTTACCATCTGAGGACAGGCGCGATAAAAGACGTGTAAAGTACTCTGTACTGTCCGGAACTTCTATGGCTTGTCCACACGTTACAGGCGTGGCTGCGTACATCAAGACATTTCATCCTGATTGGTCTCCTTCCGTAATCCAATCTGCCATCATGACAACCGCTTGGCAGATGAATGCTACTGGAACTGGGGCTGAATCGACCGAGTTTGCTTATGGAGCTGGCCATGTCGACCCAATAGCCGCTATAAATCCTGGACTTGTCTATGAGTTGAACAAAACAGACCACATCTCCTTTCTCTGCGGCATGAACTACACTTCGAAAACCCTTAAACTAATTTCAGGTGATGCCGTCATTTGCAGTGGAAAAACATTACAAAGAAACCTCAACTATCCTTCGATGTCAGCTAAACTTTCGGAATCTAATAGCTCCTTCACCGTGACTTTCAAAAGAACCGTCACCAACCTTGGTACCGCCAACTCTACATACAAATCAAAGATTGTCTTAAATCATGGATCTAAGCTCAATGTCAAGGTTTCGCCTAGTGTCCTTTCTATGAAATCGTTGAAGGAAAAGCAATCTTTCACAGTGACTGTTTCGGGCAGCAATATCGACCCAAAACTGCCTTCGTCTGCAAATCTAATATGGTCTGATGGAACACATAACGTGAGAAGCCCCATTGTTGTGTATATTGATGGTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009719 GO:0009725 GO:0009753 GO:0010033 GO:0010035 GO:0010038 GO:0016787 GO:0017171 GO:0019538 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044464 GO:0046686 GO:0050896 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

710

Amino Acids

76.22

Weight (kDa)

8.88

Isoelectric Point (pI)

40.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	33 - 111	3.8e-16	Peptidase inhibitor I9
Peptidase_S8	PF00082	135 - 551	1.5e-43	Subtilase family
fn3_6	PF17766	604 - 705	2.1e-25	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46840 AT3G46850 AT5G58820 AT5G58830 AT5G58840 AT5G58840 AT5G58840 AT5G59090 AT5G59090 AT5G59090 AT5G59100 AT5G59120 AT5G59130 AT5G59130 AT5G59130 AT5G59130 AT5G59190
fragaria_vesca	FvH4_3g37170 FvH4_7g02830 FvH4_7g02840
malus_domestica	MD02G1288900.v1.1 MD02G1289100.v1.1 MD02G1289300.v1.1 MD02G1289400.v1.1 MD02G1289500.v1.1 MD03G1083800.v1.1 MD03G1084000.v1.1 MD07G1037500.v1.1 MD07G1037600.v1.1 MD07G1037700.v1.1 MD07G1039300.v1.1 MD11G1091900.v1.1 MD11G1092000.v1.1
prunus_persica	Prupe.2G032800_v2.0.a1 Prupe.2G033000_v2.0.a1 Prupe.2G033100_v2.0.a1 Prupe.2G035100_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067700_v2.0.a1 Prupe.6G067800_v2.0.a1
pyrus_communis	pycom02g24440 pycom02g24470 pycom02g24480 pycom02g24500 pycom02g24510 pycom03g06650 pycom07g02730 pycom11g07710 pycom11g07720
rosa_chinensis	RchiOBHm_Chr1g0323281 RchiOBHm_Chr1g0323291 RchiOBHm_Chr1g0323311 RchiOBHm_Chr1g0323341 RchiOBHm_Chr1g0323351 RchiOBHm_Chr1g0323371 RchiOBHm_Chr1g0323431 RchiOBHm_Chr1g0323461 RchiOBHm_Chr1g0324031 RchiOBHm_Chr5g0066891 RchiOBHm_Chr5g0066901
rosa_laevigata	RLG00000030004 RLG00000030235 RLG00000030328 RLG00000030329 RLG00000030334 RLG00000030336 RLG00000030337 RLG00000030338 RLG00000030339 RLG00000030340 RLG00000035885 RLG00000035886 RLG00000035888 RLG00000035890
rosa_multiflora	Rmu_co8481685.1_g000001 Rmu_co8485349.1_g000001 Rmu_sc0000605.1_g000061 Rmu_sc0000804.1_g000004 Rmu_sc0000804.1_g000008 Rmu_sc0002263.1_g000074 Rmu_sc0002263.1_g000076 Rmu_sc0002263.1_g000077 Rmu_sc0003418.1_g000005 Rmu_sc0003418.1_g000007 Rmu_sc0003418.1_g000008 Rmu_sc0008378.1_g000013 Rmu_sc0010151.1_g000012
rosa_roxburghii	Rroxscaffold_1G00014220 Rroxscaffold_1G00014230 Rroxscaffold_4G00325970 Rroxscaffold_4G00326160 Rroxscaffold_4G00326570 Rroxscaffold_4G00326580 Rroxscaffold_4G00326650 Rroxscaffold_4G00326670 Rroxscaffold_4G00326680 Rroxscaffold_4G00326700
rosa_rugosa	Rorug01G0037300 Rorug01G0037400 Rorug01G0037600 Rorug01G0037700 Rorug01G0037800 Rorug01G0037800 Rorug01G0042100 Rorug01G0065000 Rorug05G0379300 Rorug05G0379400
rosa_samantha	Rh1AG054700 Rh1AG054900 Rh1AG055000 Rh1AG055200 Rh1AG055300 Rh1BG047500 Rh1CG055800 Rh1CG056000 Rh1CG061400 Rh1DG059900 Rh1DG060200 Rh5AG439100 Rh5AG439200 Rh5BG455900 Rh5CG478000 Rh5CG478300
rosa_wichuraiana	Rw1G004750 Rw1G004760 Rw1G004770 Rw1G004790 Rw1G005080 Rw1G006510 Rw5G041060 Rw5G041070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1241
Acc65I	GGTACC	1 cut(s)	1898
AccB1I	GGYRCC	1 cut(s)	1898
AccI	GTMKAC	1 cut(s)	1659
AccII	CGCG	2 cut(s)	1344, 1452
AccIII	TCCGGA	2 cut(s)	309, 1484
AclWI	GGATC	2 cut(s)	74, 1951
AcoI	YGGCCR	3 cut(s)	440, 867, 1651
AcyI	GRCGYC	1 cut(s)	341
AfaI	GTAC	7 cut(s)	598, 747, 1076, 1472, 1479, 1529, 1900
AfiI	CCNNNNNNNGG	4 cut(s)	337, 726, 978, 1275
AflII	CTTAAG	2 cut(s)	1132, 1373
AflIII	ACRYGT	2 cut(s)	1462, 1507
AgsI	TTSAA	6 cut(s)	173, 235, 1090, 1702, 1876, 1996
AjiI	CACGTC	1 cut(s)	1463
AjnI	CCWGG	2 cut(s)	1393, 1681
AjuI	GAANNNNNNNTTGG	2 cut(s)	2038, 2070
AleI	CACNNNNGTG	1 cut(s)	926
Alw21I	GWGCWC	1 cut(s)	891
Alw26I	GTCTC	8 cut(s)	29, 41, 67, 132, 549, 802, 1249, 1560
Alw44I	GTGCAC	1 cut(s)	887
AlwI	GGATC	2 cut(s)	74, 1951
AlwNI	CAGNNNCTG	2 cut(s)	620, 2021
Ama87I	CYCGRG	1 cut(s)	803
Aor13HI	TCCGGA	2 cut(s)	309, 1484
AoxI	GGCC	5 cut(s)	246, 440, 867, 1202, 1651
ApaLI	GTGCAC	1 cut(s)	887
ApeKI	GCWGC	5 cut(s)	701, 959, 1412, 1523, 2031
ArsI	GACNNNNNNTTYG	2 cut(s)	1869, 1901
AsiSI	GCGATCGC	1 cut(s)	771
Asp718I	GGTACC	1 cut(s)	1898
AspLEI	GCGC	2 cut(s)	940, 1452
AspS9I	GGNCC	7 cut(s)	247, 476, 580, 908, 1203, 1266, 1346
AsuHPI	GGTGA	8 cut(s)	16, 172, 223, 1114, 1413, 1784, 1855, 1879
AsuII	TTCGAA	1 cut(s)	1748
AvaI	CYCGRG	1 cut(s)	803
AvaII	GGWCC	5 cut(s)	476, 580, 908, 1266, 1346
BaeGI	GKGCMC	1 cut(s)	891
BaeI	ACNNNNGTAYC	4 cut(s)	1120, 1153, 1882, 1915
BalI	TGGCCA	3 cut(s)	442, 869, 1653
BanI	GGYRCC	1 cut(s)	1898
BanII	GRGCYC	1 cut(s)	119
Bbv12I	GWGCWC	1 cut(s)	891
BbvI	GCAGC	5 cut(s)	713, 971, 1399, 1510, 2043
BccI	CCATC	4 cut(s)	1444, 1586, 2075, 2117
BceAI	ACGGC	4 cut(s)	354, 380, 925, 1763
BcgI	CGANNNNNNTGC	2 cut(s)	2020, 2054
BciT130I	CCWGG	2 cut(s)	1395, 1683
BciVI	GTATCC	2 cut(s)	631, 1074
BcoDI	GTCTC	8 cut(s)	29, 41, 67, 132, 549, 802, 1249, 1560
BfaI	CTAG	3 cut(s)	576, 693, 1971
BfmI	CTRYAG	1 cut(s)	1167
BfoI	RGCGCY	1 cut(s)	941
BfrI	CTTAAG	2 cut(s)	1132, 1373
BfuI	GTATCC	2 cut(s)	631, 1074
BglII	AGATCT	1 cut(s)	1113
BisI	GCNGC	8 cut(s)	618, 702, 960, 1413, 1524, 1671, 1732, 2032
BlsI	GCNGC	8 cut(s)	619, 703, 961, 1414, 1525, 1672, 1733, 2033
BmcAI	AGTACT	1 cut(s)	1472
Bme1390I	CCNGG	2 cut(s)	1395, 1683
Bme18I	GGWCC	5 cut(s)	476, 580, 908, 1266, 1346
BmeT110I	CYCGRG	1 cut(s)	803
BmgBI	CACGTC	1 cut(s)	1463
BmgT120I	GGNCC	7 cut(s)	247, 476, 580, 908, 1203, 1266, 1346
BmiI	GGNNCC	4 cut(s)	581, 1205, 1268, 1900
BmrFI	CCNGG	2 cut(s)	1395, 1683
BmrI	ACTGGG	1 cut(s)	1626
BmsI	GCATC	3 cut(s)	754, 1196, 1765
BmuI	ACTGGG	1 cut(s)	1626
Bpu14I	TTCGAA	1 cut(s)	1748
BpuEI	CTTGAG	2 cut(s)	69, 1091
BsaHI	GRCGYC	1 cut(s)	341
BsaI	GGTCTC	1 cut(s)	1560
BsaJI	CCNNGG	4 cut(s)	586, 941, 1342, 1894
BsaWI	WCCGGW	3 cut(s)	182, 309, 1484
BsaXI	ACNNNNNCTCC	4 cut(s)	1241, 1271, 1703, 1733
Bsc4I	CCNNNNNNNGG	4 cut(s)	337, 726, 978, 1275
Bse118I	RCCGGY	1 cut(s)	896
Bse1I	ACTGG	2 cut(s)	1615, 1621
Bse3DI	GCAATG	1 cut(s)	667
BseAI	TCCGGA	2 cut(s)	309, 1484
BseBI	CCWGG	2 cut(s)	1395, 1683
BseDI	CCNNGG	4 cut(s)	586, 941, 1342, 1894
BseGI	GGATG	2 cut(s)	951, 1543
BseLI	CCNNNNNNNGG	4 cut(s)	337, 726, 978, 1275
BseMI	GCAATG	1 cut(s)	667
BseMII	CTCAG	5 cut(s)	78, 249, 906, 1284, 1431
BseNI	ACTGG	2 cut(s)	1615, 1621
BseRI	GAGGAG	3 cut(s)	17, 241, 471
BseSI	GKGCMC	1 cut(s)	891
BseXI	GCAGC	5 cut(s)	713, 971, 1399, 1510, 2043
BsgI	GTGCAG	1 cut(s)	700
Bsh1236I	CGCG	2 cut(s)	1344, 1452
Bsh1285I	CGRYCG	2 cut(s)	771, 1632
BshFI	GGCC	5 cut(s)	248, 442, 869, 1204, 1653
BshNI	GGYRCC	1 cut(s)	1898
BsiEI	CGRYCG	2 cut(s)	771, 1632
BsiHKAI	GWGCWC	1 cut(s)	891
BsiHKCI	CYCGRG	1 cut(s)	803
BsiSI	CCGG	4 cut(s)	183, 310, 897, 1485
BslFI	GGGAC	3 cut(s)	362, 593, 1252
BslI	CCNNNNNNNGG	4 cut(s)	337, 726, 978, 1275
BsmAI	GTCTC	8 cut(s)	29, 41, 67, 132, 549, 802, 1249, 1560
BsmBI	CGTCTC	3 cut(s)	132, 802, 1249
BsmFI	GGGAC	3 cut(s)	362, 593, 1252
BsmI	GAATGC	2 cut(s)	1042, 1609
BsnI	GGCC	5 cut(s)	248, 442, 869, 1204, 1653
Bso31I	GGTCTC	1 cut(s)	1560
BsoBI	CYCGRG	1 cut(s)	803
Bsp119I	TTCGAA	1 cut(s)	1748
Bsp1286I	GDGCHC	2 cut(s)	119, 891
Bsp13I	TCCGGA	2 cut(s)	309, 1484
Bsp143I	GATC	6 cut(s)	79, 543, 768, 1045, 1113, 1943
BspANI	GGCC	5 cut(s)	248, 442, 869, 1204, 1653
BspCNI	CTCAG	5 cut(s)	77, 250, 905, 1285, 1432
BspEI	TCCGGA	2 cut(s)	309, 1484
BspFNI	CGCG	2 cut(s)	1344, 1452
BspHI	TCATGA	1 cut(s)	1581
BspLI	GGNNCC	4 cut(s)	581, 1205, 1268, 1900
BspPI	GGATC	2 cut(s)	74, 1951
BspT104I	TTCGAA	1 cut(s)	1748
BspT107I	GGYRCC	1 cut(s)	1898
BspTI	CTTAAG	2 cut(s)	1132, 1373
BspTNI	GGTCTC	1 cut(s)	1560
BsrDI	GCAATG	1 cut(s)	667
BsrFI	RCCGGY	1 cut(s)	896
BsrI	ACTGG	2 cut(s)	1615, 1621
BssAI	RCCGGY	1 cut(s)	896
BssECI	CCNNGG	4 cut(s)	586, 941, 1342, 1894
BssMI	GATC	6 cut(s)	79, 543, 768, 1045, 1113, 1943
BssNI	GRCGYC	1 cut(s)	341
BssT1I	CCWWGG	2 cut(s)	586, 1894
Bst2UI	CCWGG	2 cut(s)	1395, 1683
Bst6I	CTCTTC	1 cut(s)	1342
BstACI	GRCGYC	1 cut(s)	341
BstAFI	CTTAAG	2 cut(s)	1132, 1373
BstBI	TTCGAA	1 cut(s)	1748
BstC8I	GCNNGC	1 cut(s)	1651
BstDEI	CTNAG	7 cut(s)	64, 258, 486, 892, 1293, 1440, 1947
BstDSI	CCRYGG	2 cut(s)	941, 1342
BstEII	GGTNACC	1 cut(s)	178
BstF5I	GGATG	2 cut(s)	951, 1543
BstFNI	CGCG	2 cut(s)	1344, 1452
BstH2I	RGCGCY	1 cut(s)	941
BstHHI	GCGC	2 cut(s)	940, 1452
BstKTI	GATC	6 cut(s)	82, 546, 771, 1048, 1116, 1946
BstMAI	GTCTC	8 cut(s)	29, 41, 67, 132, 549, 802, 1249, 1560
BstMBI	GATC	6 cut(s)	79, 543, 768, 1045, 1113, 1943
BstMCI	CGRYCG	2 cut(s)	771, 1632
BstMWI	GCNNNNNNNGC	5 cut(s)	626, 851, 860, 902, 1646
BstNI	CCWGG	2 cut(s)	1395, 1683
BstPI	GGTNACC	1 cut(s)	178
BstSCI	CCNGG	2 cut(s)	1393, 1681
BstSFI	CTRYAG	1 cut(s)	1167
BstSLI	GKGCMC	1 cut(s)	891
BstUI	CGCG	2 cut(s)	1344, 1452
BstV1I	GCAGC	5 cut(s)	713, 971, 1399, 1510, 2043
BstX2I	RGATCY	2 cut(s)	1113, 1943
BstXI	CCANNNNNNTGG	1 cut(s)	593
BstYI	RGATCY	2 cut(s)	1113, 1943
BsuI	GTATCC	2 cut(s)	631, 1074
BsuRI	GGCC	5 cut(s)	248, 442, 869, 1204, 1653
BtgI	CCRYGG	2 cut(s)	941, 1342
BtgZI	GCGATG	1 cut(s)	750
BtrI	CACGTC	1 cut(s)	1463
BtsCI	GGATG	2 cut(s)	951, 1543
BtsI	GCAGTG	1 cut(s)	1795
BtsIMutI	CAGTG	6 cut(s)	255, 436, 882, 1038, 1795, 2022
Cac8I	GCNNGC	1 cut(s)	1651
CaiI	CAGNNNCTG	2 cut(s)	620, 2021
CciI	TCATGA	1 cut(s)	1581
CfoI	GCGC	2 cut(s)	940, 1452
Cfr10I	RCCGGY	1 cut(s)	896
Cfr13I	GGNCC	7 cut(s)	247, 476, 580, 908, 1203, 1266, 1346
Cfr42I	CCGCGG	1 cut(s)	1345
CseI	GACGC	2 cut(s)	330, 784
Csp6I	GTAC	7 cut(s)	597, 746, 1075, 1471, 1478, 1528, 1899
CviAII	CATG	7 cut(s)	33, 355, 593, 1582, 1655, 1735, 1940
CviQI	GTAC	7 cut(s)	597, 746, 1075, 1471, 1478, 1528, 1899
DdeI	CTNAG	7 cut(s)	64, 258, 486, 892, 1293, 1440, 1947
DpnI	GATC	6 cut(s)	81, 545, 770, 1047, 1115, 1945
DpnII	GATC	6 cut(s)	79, 543, 768, 1045, 1113, 1943
DrdI	GACNNNNNNGTC	1 cut(s)	1241
DseDI	GACNNNNNNGTC	1 cut(s)	1241
EaeI	YGGCCR	3 cut(s)	440, 867, 1651
Eam1104I	CTCTTC	1 cut(s)	1342
EarI	CTCTTC	1 cut(s)	1342
Eco130I	CCWWGG	2 cut(s)	586, 1894
Eco24I	GRGCYC	1 cut(s)	119
Eco31I	GGTCTC	1 cut(s)	1560
Eco47I	GGWCC	5 cut(s)	476, 580, 908, 1266, 1346
Eco88I	CYCGRG	1 cut(s)	803
Eco91I	GGTNACC	1 cut(s)	178
EcoO109I	RGGNCCY	2 cut(s)	580, 1266
EcoO65I	GGTNACC	1 cut(s)	178
EcoRII	CCWGG	2 cut(s)	1393, 1681
EcoT14I	CCWWGG	2 cut(s)	586, 1894
EcoT22I	ATGCAT	1 cut(s)	1189
EcoT38I	GRGCYC	1 cut(s)	119
ErhI	CCWWGG	2 cut(s)	586, 1894
Esp3I	CGTCTC	3 cut(s)	132, 802, 1249
FaeI	CATG	7 cut(s)	36, 358, 596, 1585, 1658, 1738, 1943
FalI	AAGNNNNNCTT	6 cut(s)	374, 406, 984, 1016, 1916, 1948
FaqI	GGGAC	3 cut(s)	362, 593, 1252
FatI	CATG	7 cut(s)	32, 354, 592, 1581, 1654, 1734, 1939
FauI	CCCGC	2 cut(s)	1278, 1349
FblI	GTMKAC	1 cut(s)	1659
Fnu4HI	GCNGC	8 cut(s)	618, 702, 960, 1413, 1524, 1671, 1732, 2032
FokI	GGATG	2 cut(s)	958, 1530
FriOI	GRGCYC	1 cut(s)	119
Fsp4HI	GCNGC	8 cut(s)	618, 702, 960, 1413, 1524, 1671, 1732, 2032
FspBI	CTAG	3 cut(s)	576, 693, 1971
GlaI	GCGC	2 cut(s)	939, 1451
GluI	GCNGC	8 cut(s)	618, 702, 960, 1413, 1524, 1671, 1732, 2032
HaeII	RGCGCY	1 cut(s)	941
HaeIII	GGCC	5 cut(s)	248, 442, 869, 1204, 1653
HapII	CCGG	4 cut(s)	183, 310, 897, 1485
HgaI	GACGC	2 cut(s)	330, 784
HhaI	GCGC	2 cut(s)	940, 1452
Hin1I	GRCGYC	1 cut(s)	341
Hin1II	CATG	7 cut(s)	36, 358, 596, 1585, 1658, 1738, 1943
Hin6I	GCGC	2 cut(s)	938, 1450
HinP1I	GCGC	2 cut(s)	938, 1450
HincII	GTYRAC	3 cut(s)	784, 951, 1660
HindII	GTYRAC	3 cut(s)	784, 951, 1660
HindIII	AAGCTT	1 cut(s)	643
HpaI	GTTAAC	1 cut(s)	951
HpaII	CCGG	4 cut(s)	183, 310, 897, 1485
HphI	GGTGA	8 cut(s)	16, 172, 223, 1114, 1413, 1784, 1855, 1879
Hpy166II	GTNNAC	7 cut(s)	612, 784, 889, 951, 1433, 1505, 1660
Hpy8I	GTNNAC	7 cut(s)	612, 784, 889, 951, 1433, 1505, 1660
Hpy99I	CGWCG	1 cut(s)	340
HpyCH4IV	ACGT	5 cut(s)	608, 744, 1462, 1509, 2094
HpyCH4V	TGCA	7 cut(s)	717, 830, 889, 959, 1187, 1788, 2063
HpyF10VI	GCNNNNNNNGC	5 cut(s)	626, 851, 860, 902, 1646
HpyF3I	CTNAG	7 cut(s)	64, 258, 486, 892, 1293, 1440, 1947
HpySE526I	ACGT	5 cut(s)	608, 744, 1462, 1509, 2094
Hsp92I	GRCGYC	1 cut(s)	341
Hsp92II	CATG	7 cut(s)	36, 358, 596, 1585, 1658, 1738, 1943
HspAI	GCGC	2 cut(s)	938, 1450
Kpn2I	TCCGGA	2 cut(s)	309, 1484
KpnI	GGTACC	1 cut(s)	1902
KspAI	GTTAAC	1 cut(s)	951
KspI	CCGCGG	1 cut(s)	1345
Kzo9I	GATC	6 cut(s)	79, 543, 768, 1045, 1113, 1943
LmnI	GCTCC	3 cut(s)	548, 1646, 1862
Lsp1109I	GCAGC	5 cut(s)	713, 971, 1399, 1510, 2043
LweI	GCATC	3 cut(s)	754, 1196, 1765
MaeI	CTAG	3 cut(s)	576, 693, 1971
MaeII	ACGT	5 cut(s)	608, 744, 1462, 1509, 2094
MaeIII	GTNAC	9 cut(s)	178, 218, 530, 899, 1510, 1867, 1885, 2017, 2126
MalI	GATC	6 cut(s)	81, 545, 770, 1047, 1115, 1945
MboI	GATC	6 cut(s)	79, 543, 768, 1045, 1113, 1943
MboII	GAAGA	2 cut(s)	161, 1329
MfeI	CAATTG	1 cut(s)	840
MflI	RGATCY	2 cut(s)	1113, 1943
MhlI	GDGCHC	2 cut(s)	119, 891
MlsI	TGGCCA	3 cut(s)	442, 869, 1653
MluCI	AATT	3 cut(s)	69, 840, 1764
MluNI	TGGCCA	3 cut(s)	442, 869, 1653
MlyI	GAGTC	3 cut(s)	269, 705, 1229
MmeI	TCCRAC	1 cut(s)	941
Mox20I	TGGCCA	3 cut(s)	442, 869, 1653
Mph1103I	ATGCAT	1 cut(s)	1189
MroI	TCCGGA	2 cut(s)	309, 1484
MscI	TGGCCA	3 cut(s)	442, 869, 1653
MseI	TTAA	9 cut(s)	950, 986, 1133, 1254, 1287, 1305, 1374, 1758, 1934
MslI	CAYNNNNRTG	4 cut(s)	146, 359, 926, 2111
Msp20I	TGGCCA	3 cut(s)	442, 869, 1653
MspA1I	CMGCKG	2 cut(s)	617, 1344
MspCI	CTTAAG	2 cut(s)	1132, 1373
MspI	CCGG	4 cut(s)	183, 310, 897, 1485
MspR9I	CCNGG	2 cut(s)	1395, 1683
MunI	CAATTG	1 cut(s)	840
Mva1269I	GAATGC	2 cut(s)	1042, 1609
MvaI	CCWGG	2 cut(s)	1395, 1683
MvnI	CGCG	2 cut(s)	1344, 1452
MwoI	GCNNNNNNNGC	5 cut(s)	626, 851, 860, 902, 1646
NdeII	GATC	6 cut(s)	79, 543, 768, 1045, 1113, 1943
NlaIII	CATG	7 cut(s)	36, 358, 596, 1585, 1658, 1738, 1943
NlaIV	GGNNCC	4 cut(s)	581, 1205, 1268, 1900
NmeAIII	GCCGAG	2 cut(s)	224, 1180
NmuCI	GTSAC	4 cut(s)	178, 1867, 1885, 2017
NsiI	ATGCAT	1 cut(s)	1189
NspV	TTCGAA	1 cut(s)	1748
OliI	CACNNNNGTG	1 cut(s)	926
PagI	TCATGA	1 cut(s)	1581
PcsI	WCGNNNNNNNCGW	2 cut(s)	423, 1515
PctI	GAATGC	2 cut(s)	1042, 1609
PfeI	GAWTC	9 cut(s)	154, 420, 446, 877, 913, 1094, 1405, 1625, 1847
PflFI	GACNNNGTC	1 cut(s)	340
PfoI	TCCNGGA	1 cut(s)	1681
PkrI	GCNGC	8 cut(s)	619, 703, 961, 1414, 1525, 1672, 1733, 2033
Ple19I	CGATCG	1 cut(s)	771
PleI	GAGTC	3 cut(s)	268, 704, 1229
PpsI	GAGTC	3 cut(s)	268, 704, 1229
PpuMI	RGGWCCY	2 cut(s)	580, 1266
Psp5II	RGGWCCY	2 cut(s)	580, 1266
Psp6I	CCWGG	2 cut(s)	1393, 1681
PspEI	GGTNACC	1 cut(s)	178
PspGI	CCWGG	2 cut(s)	1393, 1681
PspN4I	GGNNCC	4 cut(s)	581, 1205, 1268, 1900
PspPI	GGNCC	7 cut(s)	247, 476, 580, 908, 1203, 1266, 1346
PspPPI	RGGWCCY	2 cut(s)	580, 1266
PstNI	CAGNNNCTG	2 cut(s)	620, 2021
PsuI	RGATCY	2 cut(s)	1113, 1943
PsyI	GACNNNGTC	1 cut(s)	340
PvuI	CGATCG	1 cut(s)	771
RgaI	GCGATCGC	1 cut(s)	771
RsaI	GTAC	7 cut(s)	598, 747, 1076, 1472, 1479, 1529, 1900
RsaNI	GTAC	7 cut(s)	597, 746, 1075, 1471, 1478, 1528, 1899
RseI	CAYNNNNRTG	4 cut(s)	146, 359, 926, 2111
SacII	CCGCGG	1 cut(s)	1345
SalI	GTCGAC	1 cut(s)	1658
SaqAI	TTAA	9 cut(s)	950, 986, 1133, 1254, 1287, 1305, 1374, 1758, 1934
SatI	GCNGC	8 cut(s)	618, 702, 960, 1413, 1524, 1671, 1732, 2032
Sau3AI	GATC	6 cut(s)	79, 543, 768, 1045, 1113, 1943
Sau96I	GGNCC	7 cut(s)	247, 476, 580, 908, 1203, 1266, 1346
ScaI	AGTACT	1 cut(s)	1472
SchI	GAGTC	3 cut(s)	269, 705, 1229
ScrFI	CCNGG	2 cut(s)	1395, 1683
SduI	GDGCHC	2 cut(s)	119, 891
SfaAI	GCGATCGC	1 cut(s)	771
SfaNI	GCATC	3 cut(s)	754, 1196, 1765
SfcI	CTRYAG	1 cut(s)	1167
Sfr303I	CCGCGG	1 cut(s)	1345
SfuI	TTCGAA	1 cut(s)	1748
SgfI	GCGATCGC	1 cut(s)	771
SgrBI	CCGCGG	1 cut(s)	1345
SinI	GGWCC	5 cut(s)	476, 580, 908, 1266, 1346
SmiMI	CAYNNNNRTG	4 cut(s)	146, 359, 926, 2111
SmlI	CTYRAG	4 cut(s)	84, 1070, 1132, 1373
SmoI	CTYRAG	4 cut(s)	84, 1070, 1132, 1373
Sse9I	AATT	3 cut(s)	69, 840, 1764
SspI	AATATT	1 cut(s)	166
SspMI	CTAG	3 cut(s)	576, 693, 1971
StyD4I	CCNGG	2 cut(s)	1393, 1681
StyI	CCWWGG	2 cut(s)	586, 1894
TaiI	ACGT	5 cut(s)	611, 747, 1465, 1512, 2097
TaqI	TCGA	7 cut(s)	152, 426, 1628, 1659, 1748, 1826, 2040
TaqII	GACCGA	1 cut(s)	1646
TasI	AATT	3 cut(s)	69, 840, 1764
TatI	WGTACW	2 cut(s)	1470, 1477
TauI	GCSGC	3 cut(s)	620, 1673, 1734
TfiI	GAWTC	9 cut(s)	154, 420, 446, 877, 913, 1094, 1405, 1625, 1847
Tru1I	TTAA	9 cut(s)	950, 986, 1133, 1254, 1287, 1305, 1374, 1758, 1934
Tru9I	TTAA	9 cut(s)	950, 986, 1133, 1254, 1287, 1305, 1374, 1758, 1934
TscAI	CASTG	6 cut(s)	262, 436, 889, 1038, 1795, 2022
TseFI	GTSAC	4 cut(s)	178, 1867, 1885, 2017
TseI	GCWGC	5 cut(s)	701, 959, 1412, 1523, 2031
Tsp45I	GTSAC	4 cut(s)	178, 1867, 1885, 2017
TspDTI	ATGAA	9 cut(s)	343, 377, 412, 1146, 1150, 1532, 1616, 1751, 2000
TspGWI	ACGGA	3 cut(s)	114, 1092, 1552
TspRI	CASTG	6 cut(s)	262, 436, 889, 1038, 1795, 2022
Tth111I	GACNNNGTC	1 cut(s)	340
Vha464I	CTTAAG	2 cut(s)	1132, 1373
VneI	GTGCAC	1 cut(s)	887
VpaK11BI	GGWCC	5 cut(s)	476, 580, 908, 1266, 1346
XbaI	TCTAGA	1 cut(s)	692
XmiI	GTMKAC	1 cut(s)	1659
XspI	CTAG	3 cut(s)	576, 693, 1971
ZrmI	AGTACT	1 cut(s)	1472
Zsp2I	ATGCAT	1 cut(s)	1189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.