RchiOBHm_Chr5g0066901

Subtilisin-like serine endopeptidase family protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
72959020 .. 72961869
2850 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34265

Sequence Viewer

Length: 2121 bp
ATGTTGCAGGTTCACATTGTATACTTAGGGTCACTTCCTAATACGGTGTACTCACCATCGTCTCACCACCTTGGTATATTACAGAAAGTTGTCCAGGGAAGAGGTTCTCTCAAAAATTACCTGATCAGAAGCTACAAAAGGAGTTTCAATGGATTTGCTGCCAATCTGACTGACCAGGAAAGAGAAAAACTTGCTAACATGAAGGAAGTAGTCTCCATCTTCCAGAGCACAAAATTCAAACTCCAAACAACAAGATCTTGGGATTTTATGGGATTCCATGAGTGTATCAACCGAAATGCTACTATCGAAAGTGATGTAATTATTGGTGTTATTGATAGTGGAATTTGGCCTGAATCAGAGAGCTTTCAAGACAAAGGCTTTGGTCTGGCTCCTAAAAAGTGGAAAGGTGCTTGCAATGGAGGCAAGAATTTCACTTGCAACAACAAACTCATTGGAGCTCGGTATTACTCATCACTGCAGTCTGCAAGAGATGAAGTTGGTCATGGAAGCCACACTGCTTCAACAGCAGCAGGGAATGTTGTGCAGGGTGTTAGCTTTTACGGACTAGCACAAGGTACTGCAAGAGGAGGAGTTCCCTCTGCAAGAATTGCAACATATCAAGTATGTGATTTGGATTCGTTCTGTAGCGGACACGATGTGTTGGCTGCTTTCGATGATGCCATTGCTGATGGAGTTGACATCATTACACTTTCCATCGGAACAGATCTTCGATCTGAATTTTACAAGGATCCTATTGCAATTGGTTCTTTTCATGCCATGGCAAAAGGGATACTAACCTCCAACTCTGCTGGCAATGAAGGTCCTGCCGGCGATACTGTGTCAAGTGCAGCACCTTGGACACTTACAGTTGCAGCAAGTAGCATTGATCGTCGGATCATTGACAAGGTTGTTCTTGGAAATGGAAGCATACTAGTCGGGACTTCAGTGAACACTTTCACATTAAATGGATCAAGTTTTCCTCTGATATATGGAAAAGATGCTTCACGTCATGAATGCTCGGACTCCCAAGCTGGGTTATGTGATGAAGATTGCCTTGACAGTGATGCAGTTAAGGGAAAGATTGTGCTGTGTGATGCATTCGCTGAAGCAGATTTTGTGGCTCATAAAGCTGGTGCACTAGGTTCTATTTTAAATAATGACGGAACTGGTGATTTTTCTAATGTTGTCTCATTACCTGCAATAGCTTTAAGCTATGAAAACTATAATGCAGTCAAGTTTTACATGAACTCCACTAGAGATCCTCGAGCAAACATATTAAGAAGTGAAGTCATAAATGACCCGGCTGCACCAATTGTCGCTTCCTTCTCTTCACGTGGACCGAATCCAATTACACCTGACATTATAAAGCCAGATATAACTGCGCCTGGTGTAGACATTTTGGCTGCATATTCGACTGTTGCCTCAATTTCAGAGAGCCCCAAAGACAAGAGGCATGTAAAGTACCATATATTATCTGGAACCTCCATGTCTTGCCCTCATGCTGCTGCTGTTGCTGCGTATGTTAAATCATTCCATCCCAATTGGTCTCCATCAGCTATAAAATCATCTCTTATGACTACTGCTTGGCCAATGAATAATACCAACAATGCACCTGCTGAGTTTGCTTATGGATCTGGACATGTCAATCCTGTAAAAGCTATAGATCCGGGGCTTGTTTATGAAACTTCTAAAGAAGATTTCATAAACCTACTTTGCATGGTCTATGATGAAGCCAAAGTGAGACTGATATCAGGAGATAACAGCACTTGCCCTACAGGCTCTGACAAAGGATCACCAAAGGATCTTAACTACCCTTCAATGGCTGCAGCAAACATTACACCGAAGAAACCTTTTACGATTAACTTTCATAGAACAGTTAAAAATGTTGGCCTTGCAAACTCTACTTACAATGCCACCATCTTCCAAAGTTCCAAAGACGTGGATATCAAAGTTGTGCCTGAATTTCTATCCTTCAAGTCCTTGAATGAGGAGAAGAGCTTTGATGTGGCTGTTGTTGGAAAAGGTTTGATAGGTGGATCACTAATTTCTTCGTCACTGGTTTGGTCTGATGGTATTCATAACGTTAGGAGTCCAGTTGTGGTGCGTACTGAAATAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

706

Amino Acids

75.46

Weight (kDa)

6.39

Isoelectric Point (pI)

40.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 4 - 82 1.7e-13 Peptidase inhibitor I9
Peptidase_S8 PF00082 104 - 546 1.7e-43 Subtilase family
PA PF02225 327 - 410 3.5e-06 PA domain
fn3_6 PF17766 601 - 701 7.4e-23 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000257)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46840 AT3G46850 AT5G58820 AT5G58830 AT5G58840 AT5G58840 AT5G58840 AT5G59090 AT5G59090 AT5G59090 AT5G59100 AT5G59120 AT5G59130 AT5G59130 AT5G59130 AT5G59130 AT5G59190
fragaria_vesca FvH4_3g37170 FvH4_7g02830 FvH4_7g02840
malus_domestica MD02G1288900.v1.1 MD02G1289100.v1.1 MD02G1289300.v1.1 MD02G1289400.v1.1 MD02G1289500.v1.1 MD03G1083800.v1.1 MD03G1084000.v1.1 MD07G1037500.v1.1 MD07G1037600.v1.1 MD07G1037700.v1.1 MD07G1039300.v1.1 MD11G1091900.v1.1 MD11G1092000.v1.1
prunus_persica Prupe.2G032800_v2.0.a1 Prupe.2G033000_v2.0.a1 Prupe.2G033100_v2.0.a1 Prupe.2G035100_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067700_v2.0.a1 Prupe.6G067800_v2.0.a1
pyrus_communis pycom02g24440 pycom02g24470 pycom02g24480 pycom02g24500 pycom02g24510 pycom03g06650 pycom07g02730 pycom11g07710 pycom11g07720
rosa_chinensis RchiOBHm_Chr1g0323281 RchiOBHm_Chr1g0323291 RchiOBHm_Chr1g0323311 RchiOBHm_Chr1g0323341 RchiOBHm_Chr1g0323351 RchiOBHm_Chr1g0323371 RchiOBHm_Chr1g0323431 RchiOBHm_Chr1g0323461 RchiOBHm_Chr1g0324031 RchiOBHm_Chr5g0066891 RchiOBHm_Chr5g0066901
rosa_laevigata RLG00000030004 RLG00000030235 RLG00000030328 RLG00000030329 RLG00000030334 RLG00000030336 RLG00000030337 RLG00000030338 RLG00000030339 RLG00000030340 RLG00000035885 RLG00000035886 RLG00000035888 RLG00000035890
rosa_multiflora Rmu_co8481685.1_g000001 Rmu_co8485349.1_g000001 Rmu_sc0000605.1_g000061 Rmu_sc0000804.1_g000004 Rmu_sc0000804.1_g000008 Rmu_sc0002263.1_g000074 Rmu_sc0002263.1_g000076 Rmu_sc0002263.1_g000077 Rmu_sc0003418.1_g000005 Rmu_sc0003418.1_g000007 Rmu_sc0003418.1_g000008 Rmu_sc0008378.1_g000013 Rmu_sc0010151.1_g000012
rosa_roxburghii Rroxscaffold_1G00014220 Rroxscaffold_1G00014230 Rroxscaffold_4G00325970 Rroxscaffold_4G00326160 Rroxscaffold_4G00326570 Rroxscaffold_4G00326580 Rroxscaffold_4G00326650 Rroxscaffold_4G00326670 Rroxscaffold_4G00326680 Rroxscaffold_4G00326700
rosa_rugosa Rorug01G0037300 Rorug01G0037400 Rorug01G0037600 Rorug01G0037700 Rorug01G0037800 Rorug01G0037800 Rorug01G0042100 Rorug01G0065000 Rorug05G0379300 Rorug05G0379400
rosa_samantha Rh1AG054700 Rh1AG054900 Rh1AG055000 Rh1AG055200 Rh1AG055300 Rh1BG047500 Rh1CG055800 Rh1CG056000 Rh1CG061400 Rh1DG059900 Rh1DG060200 Rh5AG439100 Rh5AG439200 Rh5BG455900 Rh5CG478000 Rh5CG478300
rosa_wichuraiana Rw1G004750 Rw1G004760 Rw1G004770 Rw1G004790 Rw1G005080 Rw1G006510 Rw5G041060 Rw5G041070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1364
AarI CACCTGC 1 cut(s) 1621
Acc36I ACCTGC 2 cut(s) 1204, 1621
AccI GTMKAC 2 cut(s) 21, 1392
AciI CCGC 1 cut(s) 648
AclI AACGTT 1 cut(s) 2082
AcoI YGGCCR 1 cut(s) 1586
AcsI RAATTY 5 cut(s) 233, 342, 427, 737, 1961
AcuI CTGAAG 2 cut(s) 927, 1125
AcvI CACGTG 1 cut(s) 1334
AdeI CACNNNGTG 1 cut(s) 658
AfaI GTAC 4 cut(s) 50, 577, 1463, 2107
AfiI CCNNNNNNNGG 2 cut(s) 1032, 1819
AflIII ACRYGT 1 cut(s) 1639
AgsI TTSAA 7 cut(s) 148, 238, 368, 522, 1818, 1975, 1984
AhlI ACTAGT 1 cut(s) 931
AjiI CACGTC 2 cut(s) 1007, 1939
AjnI CCWGG 3 cut(s) 93, 174, 1384
AjuI GAANNNNNNNTTGG 2 cut(s) 1303, 1335
Alw21I GWGCWC 3 cut(s) 230, 460, 1138
Alw26I GTCTC 5 cut(s) 66, 217, 1192, 1551, 1735
Alw44I GTGCAC 1 cut(s) 1134
AlwNI CAGNNNCTG 1 cut(s) 1781
Ama87I CYCGRG 1 cut(s) 1263
AoxI GGCC 3 cut(s) 347, 1586, 1888
ApaLI GTGCAC 1 cut(s) 1134
ApoI RAATTY 5 cut(s) 233, 342, 427, 737, 1961
ArsI GACNNNNNNTTYG 2 cut(s) 362, 394
Asp700I GAANNNNTTC 2 cut(s) 103, 953
AspLEI GCGC 1 cut(s) 1384
AspS9I GGNCC 2 cut(s) 821, 1337
AsuC2I CCSGG 2 cut(s) 1301, 1668
AsuHPI GGTGA 4 cut(s) 45, 56, 1181, 1785
AvaI CYCGRG 1 cut(s) 1263
AvaII GGWCC 2 cut(s) 821, 1337
BaeGI GKGCMC 1 cut(s) 1138
BalI TGGCCA 1 cut(s) 1588
BamHI GGATCC 1 cut(s) 748
BanII GRGCYC 2 cut(s) 460, 1439
BbrPI CACGTG 1 cut(s) 1334
Bbv12I GWGCWC 3 cut(s) 230, 460, 1138
BccI CCATC 8 cut(s) 64, 224, 683, 722, 1542, 1558, 1925, 2063
BcgI CGANNNNNNTGC 2 cut(s) 916, 950
BciT130I CCWGG 3 cut(s) 95, 176, 1386
BciVI GTATCC 1 cut(s) 783
BclI TGATCA 1 cut(s) 123
BcnI CCSGG 2 cut(s) 1301, 1668
BcoDI GTCTC 5 cut(s) 66, 217, 1192, 1551, 1735
BcuI ACTAGT 1 cut(s) 931
BfaI CTAG 4 cut(s) 566, 932, 1139, 1254
BfmI CTRYAG 5 cut(s) 476, 643, 1659, 1773, 1824
BfuAI ACCTGC 2 cut(s) 1204, 1621
BfuI GTATCC 1 cut(s) 783
BglI GCCNNNNNGGC 1 cut(s) 1776
BglII AGATCT 2 cut(s) 254, 724
Bme1390I CCNGG 5 cut(s) 95, 176, 1301, 1386, 1668
Bme18I GGWCC 2 cut(s) 821, 1337
BmeT110I CYCGRG 1 cut(s) 1263
BmgBI CACGTC 2 cut(s) 1007, 1939
BmgT120I GGNCC 2 cut(s) 821, 1337
BmiI GGNNCC 3 cut(s) 390, 750, 1480
BmrFI CCNGG 5 cut(s) 95, 176, 1301, 1386, 1668
BmsI GCATC 4 cut(s) 667, 988, 1054, 1084
BplI GAGNNNNNCTC 2 cut(s) 93, 125
BpuMI CCSGG 2 cut(s) 1301, 1668
BsaAI YACGTR 1 cut(s) 1334
BsaI GGTCTC 1 cut(s) 1551
BsaJI CCNNGG 5 cut(s) 70, 94, 777, 854, 1667
BsaXI ACNNNNNCTCC 2 cut(s) 1232, 1262
Bsc4I CCNNNNNNNGG 2 cut(s) 1032, 1819
Bse118I RCCGGY 1 cut(s) 827
Bse1I ACTGG 3 cut(s) 1171, 2061, 2093
Bse3DI GCAATG 3 cut(s) 421, 681, 820
BseBI CCWGG 3 cut(s) 95, 176, 1386
BseDI CCNNGG 5 cut(s) 70, 94, 777, 854, 1667
BseGI GGATG 1 cut(s) 1534
BseLI CCNNNNNNNGG 2 cut(s) 1032, 1819
BseMI GCAATG 3 cut(s) 421, 681, 820
BseMII CTCAG 1 cut(s) 1608
BseNI ACTGG 3 cut(s) 1171, 2061, 2093
BseRI GAGGAG 3 cut(s) 600, 603, 2003
BseSI GKGCMC 1 cut(s) 1138
BseYI CCCAGC 1 cut(s) 1031
BsgI GTGCAG 3 cut(s) 563, 867, 1290
BshFI GGCC 3 cut(s) 349, 1588, 1890
BsiHKAI GWGCWC 3 cut(s) 230, 460, 1138
BsiHKCI CYCGRG 1 cut(s) 1263
BsiSI CCGG 3 cut(s) 828, 1301, 1667
BslFI GGGAC 1 cut(s) 952
BslI CCNNNNNNNGG 2 cut(s) 1032, 1819
BsmAI GTCTC 5 cut(s) 66, 217, 1192, 1551, 1735
BsmBI CGTCTC 1 cut(s) 66
BsmFI GGGAC 1 cut(s) 952
BsmI GAATGC 2 cut(s) 1019, 1097
BsnI GGCC 3 cut(s) 349, 1588, 1890
Bso31I GGTCTC 1 cut(s) 1551
BsoBI CYCGRG 1 cut(s) 1263
Bsp1286I GDGCHC 4 cut(s) 230, 460, 1138, 1439
Bsp19I CCATGG 1 cut(s) 777
BspACI CCGC 1 cut(s) 648
BspANI GGCC 3 cut(s) 349, 1588, 1890
BspCNI CTCAG 1 cut(s) 1609
BspHI TCATGA 1 cut(s) 1009
BspLI GGNNCC 3 cut(s) 390, 750, 1480
BspMAI CTGCAG 2 cut(s) 480, 1828
BspMI ACCTGC 2 cut(s) 1204, 1621
BspQI GCTCTTC 1 cut(s) 1988
BspTNI GGTCTC 1 cut(s) 1551
BsrDI GCAATG 3 cut(s) 421, 681, 820
BsrFI RCCGGY 1 cut(s) 827
BsrI ACTGG 3 cut(s) 1171, 2061, 2093
BssAI RCCGGY 1 cut(s) 827
BssECI CCNNGG 5 cut(s) 70, 94, 777, 854, 1667
BssNAI GTATAC 1 cut(s) 22
BssT1I CCWWGG 3 cut(s) 70, 777, 854
Bst1107I GTATAC 1 cut(s) 22
Bst2UI CCWGG 3 cut(s) 95, 176, 1386
Bst4CI ACNGT 6 cut(s) 46, 838, 868, 1061, 1417, 1876
Bst6I CTCTTC 3 cut(s) 94, 1333, 1988
BstAPI GCANNNNNTGC 1 cut(s) 608
BstBAI YACGTR 1 cut(s) 1334
BstC8I GCNNGC 3 cut(s) 412, 811, 829
BstDEI CTNAG 2 cut(s) 25, 1617
BstDSI CCRYGG 1 cut(s) 777
BstF5I GGATG 1 cut(s) 1534
BstHHI GCGC 1 cut(s) 1384
BstMAI GTCTC 5 cut(s) 66, 217, 1192, 1551, 1735
BstMWI GCNNNNNNNGC 8 cut(s) 420, 524, 608, 1127, 1511, 1514, 1622, 1776
BstNI CCWGG 3 cut(s) 95, 176, 1386
BstNSI RCATGY 2 cut(s) 1457, 1643
BstSCI CCNGG 5 cut(s) 93, 174, 1299, 1384, 1666
BstSFI CTRYAG 5 cut(s) 476, 643, 1659, 1773, 1824
BstSLI GKGCMC 1 cut(s) 1138
BstX2I RGATCY 7 cut(s) 254, 724, 748, 1258, 1631, 1663, 1801
BstXI CCANNNNNNTGG 1 cut(s) 1939
BstYI RGATCY 7 cut(s) 254, 724, 748, 1258, 1631, 1663, 1801
BstZ17I GTATAC 1 cut(s) 22
BsuI GTATCC 1 cut(s) 783
BsuRI GGCC 3 cut(s) 349, 1588, 1890
BtgI CCRYGG 1 cut(s) 777
BtrI CACGTC 2 cut(s) 1007, 1939
BtsCI GGATG 1 cut(s) 1534
BtsI GCAGTG 2 cut(s) 473, 513
BtsIMutI CAGTG 5 cut(s) 473, 513, 951, 1066, 2054
BveI ACCTGC 2 cut(s) 1204, 1621
Cac8I GCNNGC 3 cut(s) 412, 811, 829
CaiI CAGNNNCTG 1 cut(s) 1781
CciI TCATGA 1 cut(s) 1009
CfoI GCGC 1 cut(s) 1384
Cfr10I RCCGGY 1 cut(s) 827
Cfr13I GGNCC 2 cut(s) 821, 1337
Csp6I GTAC 4 cut(s) 49, 576, 1462, 2106
CviQI GTAC 4 cut(s) 49, 576, 1462, 2106
DdeI CTNAG 2 cut(s) 25, 1617
DraI TTTAAA 1 cut(s) 1152
DraIII CACNNNGTG 1 cut(s) 658
EaeI YGGCCR 1 cut(s) 1586
Eam1104I CTCTTC 3 cut(s) 94, 1333, 1988
EarI CTCTTC 3 cut(s) 94, 1333, 1988
Ecl136II GAGCTC 1 cut(s) 458
Eco130I CCWWGG 3 cut(s) 70, 777, 854
Eco24I GRGCYC 2 cut(s) 460, 1439
Eco31I GGTCTC 1 cut(s) 1551
Eco32I GATATC 2 cut(s) 1749, 1945
Eco47I GGWCC 2 cut(s) 821, 1337
Eco53kI GAGCTC 1 cut(s) 458
Eco57I CTGAAG 2 cut(s) 927, 1125
Eco72I CACGTG 1 cut(s) 1334
Eco88I CYCGRG 1 cut(s) 1263
EcoICRI GAGCTC 1 cut(s) 458
EcoO109I RGGNCCY 1 cut(s) 821
EcoRII CCWGG 3 cut(s) 93, 174, 1384
EcoRV GATATC 2 cut(s) 1749, 1945
EcoT14I CCWWGG 3 cut(s) 70, 777, 854
EcoT22I ATGCAT 1 cut(s) 1099
EcoT38I GRGCYC 2 cut(s) 460, 1439
ErhI CCWWGG 3 cut(s) 70, 777, 854
Esp3I CGTCTC 1 cut(s) 66
FalI AAGNNNNNCTT 2 cut(s) 1038, 1070
FaqI GGGAC 1 cut(s) 952
FbaI TGATCA 1 cut(s) 123
FblI GTMKAC 2 cut(s) 21, 1392
FokI GGATG 1 cut(s) 1521
FriOI GRGCYC 2 cut(s) 460, 1439
FspBI CTAG 4 cut(s) 566, 932, 1139, 1254
GlaI GCGC 1 cut(s) 1383
GsaI CCCAGC 1 cut(s) 1035
HaeIII GGCC 3 cut(s) 349, 1588, 1890
HapII CCGG 3 cut(s) 828, 1301, 1667
HhaI GCGC 1 cut(s) 1384
Hin6I GCGC 1 cut(s) 1382
HinP1I GCGC 1 cut(s) 1382
HincII GTYRAC 1 cut(s) 697
HindII GTYRAC 1 cut(s) 697
HinfI GANTC 6 cut(s) 273, 353, 635, 1022, 1342, 2089
HpaII CCGG 3 cut(s) 828, 1301, 1667
HphI GGTGA 4 cut(s) 45, 56, 1181, 1785
Hpy166II GTNNAC 8 cut(s) 13, 22, 49, 697, 949, 1136, 1337, 1393
Hpy188III TCNNGA 7 cut(s) 223, 368, 937, 1010, 1476, 1635, 1752
Hpy8I GTNNAC 8 cut(s) 13, 22, 49, 697, 949, 1136, 1337, 1393
Hpy99I CGWCG 1 cut(s) 894
HpyAV CCTTC 5 cut(s) 196, 812, 1333, 1824, 1981
HpyCH4III ACNGT 6 cut(s) 46, 838, 868, 1061, 1417, 1876
HpyCH4IV ACGT 4 cut(s) 1006, 1333, 1938, 2082
HpyF10VI GCNNNNNNNGC 8 cut(s) 420, 524, 608, 1127, 1511, 1514, 1622, 1776
HpyF3I CTNAG 2 cut(s) 25, 1617
HpySE526I ACGT 4 cut(s) 1006, 1333, 1938, 2082
HspAI GCGC 1 cut(s) 1382
KroI GCCGGC 1 cut(s) 827
KroNI GCCGGC 1 cut(s) 829
Ksp22I TGATCA 1 cut(s) 123
LguI GCTCTTC 1 cut(s) 1988
LmnI GCTCC 2 cut(s) 394, 455
LweI GCATC 4 cut(s) 667, 988, 1054, 1084
MaeI CTAG 4 cut(s) 566, 932, 1139, 1254
MaeII ACGT 4 cut(s) 1006, 1333, 1938, 2082
MaeIII GTNAC 2 cut(s) 30, 2052
MfeI CAATTG 3 cut(s) 759, 1311, 1540
MflI RGATCY 7 cut(s) 254, 724, 748, 1258, 1631, 1663, 1801
MhlI GDGCHC 4 cut(s) 230, 460, 1138, 1439
MlsI TGGCCA 1 cut(s) 1588
MluNI TGGCCA 1 cut(s) 1588
MlyI GAGTC 2 cut(s) 1016, 2098
MmeI TCCRAC 3 cut(s) 825, 872, 1996
Mox20I TGGCCA 1 cut(s) 1588
Mph1103I ATGCAT 1 cut(s) 1099
MroNI GCCGGC 1 cut(s) 827
MroXI GAANNNNTTC 2 cut(s) 103, 953
MscI TGGCCA 1 cut(s) 1588
MseI TTAA 9 cut(s) 962, 1071, 1151, 1208, 1277, 1524, 1806, 1860, 1878
Msp20I TGGCCA 1 cut(s) 1588
MspI CCGG 3 cut(s) 828, 1301, 1667
MspR9I CCNGG 5 cut(s) 95, 176, 1301, 1386, 1668
MunI CAATTG 3 cut(s) 759, 1311, 1540
Mva1269I GAATGC 2 cut(s) 1019, 1097
MvaI CCWGG 3 cut(s) 95, 176, 1386
MwoI GCNNNNNNNGC 8 cut(s) 420, 524, 608, 1127, 1511, 1514, 1622, 1776
NaeI GCCGGC 1 cut(s) 829
NciI CCSGG 2 cut(s) 1301, 1668
NcoI CCATGG 1 cut(s) 777
NgoMIV GCCGGC 1 cut(s) 827
NlaIV GGNNCC 3 cut(s) 390, 750, 1480
NmuCI GTSAC 2 cut(s) 30, 2052
NsiI ATGCAT 1 cut(s) 1099
NspI RCATGY 2 cut(s) 1457, 1643
PaeR7I CTCGAG 1 cut(s) 1263
PagI TCATGA 1 cut(s) 1009
PaqCI CACCTGC 1 cut(s) 1621
PciI ACATGT 1 cut(s) 1639
PciSI GCTCTTC 1 cut(s) 1988
PctI GAATGC 2 cut(s) 1019, 1097
PdiI GCCGGC 1 cut(s) 829
PdmI GAANNNNTTC 2 cut(s) 103, 953
PfeI GAWTC 4 cut(s) 273, 353, 635, 1342
PleI GAGTC 2 cut(s) 1016, 2097
PmaCI CACGTG 1 cut(s) 1334
PmlI CACGTG 1 cut(s) 1334
PpsI GAGTC 2 cut(s) 1016, 2097
Ppu21I YACGTR 1 cut(s) 1334
PpuMI RGGWCCY 1 cut(s) 821
PscI ACATGT 1 cut(s) 1639
PsiI TTATAA 1 cut(s) 1364
Psp124BI GAGCTC 1 cut(s) 460
Psp1406I AACGTT 1 cut(s) 2082
Psp5II RGGWCCY 1 cut(s) 821
Psp6I CCWGG 3 cut(s) 93, 174, 1384
PspCI CACGTG 1 cut(s) 1334
PspFI CCCAGC 1 cut(s) 1031
PspGI CCWGG 3 cut(s) 93, 174, 1384
PspN4I GGNNCC 3 cut(s) 390, 750, 1480
PspPI GGNCC 2 cut(s) 821, 1337
PspPPI RGGWCCY 1 cut(s) 821
PspXI VCTCGAGB 1 cut(s) 1263
PstI CTGCAG 2 cut(s) 480, 1828
PstNI CAGNNNCTG 1 cut(s) 1781
PsuI RGATCY 7 cut(s) 254, 724, 748, 1258, 1631, 1663, 1801
RsaI GTAC 4 cut(s) 50, 577, 1463, 2107
RsaNI GTAC 4 cut(s) 49, 576, 1462, 2106
SacI GAGCTC 1 cut(s) 460
SapI GCTCTTC 1 cut(s) 1988
SaqAI TTAA 9 cut(s) 962, 1071, 1151, 1208, 1277, 1524, 1806, 1860, 1878
Sau96I GGNCC 2 cut(s) 821, 1337
SchI GAGTC 2 cut(s) 1016, 2098
ScrFI CCNGG 5 cut(s) 95, 176, 1301, 1386, 1668
SduI GDGCHC 4 cut(s) 230, 460, 1138, 1439
SfaNI GCATC 4 cut(s) 667, 988, 1054, 1084
SfcI CTRYAG 5 cut(s) 476, 643, 1659, 1773, 1824
Sfr274I CTCGAG 1 cut(s) 1263
SinI GGWCC 2 cut(s) 821, 1337
SlaI CTCGAG 1 cut(s) 1263
SmlI CTYRAG 1 cut(s) 1263
SmoI CTYRAG 1 cut(s) 1263
SpeI ACTAGT 1 cut(s) 931
SsiI CCGC 1 cut(s) 648
SspMI CTAG 4 cut(s) 566, 932, 1139, 1254
SstI GAGCTC 1 cut(s) 460
StyD4I CCNGG 5 cut(s) 93, 174, 1299, 1384, 1666
StyI CCWWGG 3 cut(s) 70, 777, 854
TaaI ACNGT 6 cut(s) 46, 838, 868, 1061, 1417, 1876
TaiI ACGT 4 cut(s) 1009, 1336, 1941, 2085
TaqI TCGA 5 cut(s) 306, 672, 730, 1264, 1412
TaqII GACCGA 1 cut(s) 1354
TatI WGTACW 1 cut(s) 48
TfiI GAWTC 4 cut(s) 273, 353, 635, 1342
Tru1I TTAA 9 cut(s) 962, 1071, 1151, 1208, 1277, 1524, 1806, 1860, 1878
Tru9I TTAA 9 cut(s) 962, 1071, 1151, 1208, 1277, 1524, 1806, 1860, 1878
TscAI CASTG 5 cut(s) 480, 520, 951, 1066, 2061
TseFI GTSAC 2 cut(s) 30, 2052
Tsp45I GTSAC 2 cut(s) 30, 2052
TspGWI ACGGA 2 cut(s) 576, 1176
TspRI CASTG 5 cut(s) 480, 520, 951, 1066, 2061
VneI GTGCAC 1 cut(s) 1134
VpaK11BI GGWCC 2 cut(s) 821, 1337
XapI RAATTY 5 cut(s) 233, 342, 427, 737, 1961
XceI RCATGY 2 cut(s) 1457, 1643
XcmI CCANNNNNNNNNTGG 1 cut(s) 1472
XhoI CTCGAG 1 cut(s) 1263
XmiI GTMKAC 2 cut(s) 21, 1392
XmnI GAANNNNTTC 2 cut(s) 103, 953
XspI CTAG 4 cut(s) 566, 932, 1139, 1254
Zsp2I ATGCAT 1 cut(s) 1099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.