RLG00000035885

Subtilisin-like serine endopeptidase family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000257
Physical Location & Seq
Forward (+)
73128369 .. 73129121
753 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035885

Sequence Viewer

Length: 432 bp
ATGAAGGAAGTAGTCTCTGTCTTTCCGAGCAGAATATTGCAACTTCAGACAACAAGATCTTGGGATTTTATGGGTTTGAATGAGAAAGTTAGTCGAAATGCCACTGTTGAGAGCGATATCATTGTTGGTGTGATTGACACTGGAATTTGGCCCGAGTCTGAGAGCTTTAAAGATGATGGTTTTGGTCCTCCTCCTAAGAAGTGGAAAGATTATCTGCATAACCGAACTATTCATGTGAAAGCACATGAAACTACCTTAGGTACTCCAGACTCGTGGTTCTGCATAACTTATAAAGAGCTCATTGGAGCTCGGTATTACTCATCAACAGAGTCTGCAAGGGATGAAGTAGGCCATGGAACTCACACTGCCTCAACAGTAGCATGGAATGCTGTTGTGGATGTTAGCTTTTATGGACCCTTGAAAGCCGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Inhibitor_I9 PA Peptidase_S8

Protein Analysis

144

Amino Acids

16.02

Weight (kDa)

5.92

Isoelectric Point (pI)

33.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000257)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46840 AT3G46850 AT5G58820 AT5G58830 AT5G58840 AT5G58840 AT5G58840 AT5G59090 AT5G59090 AT5G59090 AT5G59100 AT5G59120 AT5G59130 AT5G59130 AT5G59130 AT5G59130 AT5G59190
fragaria_vesca FvH4_3g37170 FvH4_7g02830 FvH4_7g02840
malus_domestica MD02G1288900.v1.1 MD02G1289100.v1.1 MD02G1289300.v1.1 MD02G1289400.v1.1 MD02G1289500.v1.1 MD03G1083800.v1.1 MD03G1084000.v1.1 MD07G1037500.v1.1 MD07G1037600.v1.1 MD07G1037700.v1.1 MD07G1039300.v1.1 MD11G1091900.v1.1 MD11G1092000.v1.1
prunus_persica Prupe.2G032800_v2.0.a1 Prupe.2G033000_v2.0.a1 Prupe.2G033100_v2.0.a1 Prupe.2G035100_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067700_v2.0.a1 Prupe.6G067800_v2.0.a1
pyrus_communis pycom02g24440 pycom02g24470 pycom02g24480 pycom02g24500 pycom02g24510 pycom03g06650 pycom07g02730 pycom11g07710 pycom11g07720
rosa_chinensis RchiOBHm_Chr1g0323281 RchiOBHm_Chr1g0323291 RchiOBHm_Chr1g0323311 RchiOBHm_Chr1g0323341 RchiOBHm_Chr1g0323351 RchiOBHm_Chr1g0323371 RchiOBHm_Chr1g0323431 RchiOBHm_Chr1g0323461 RchiOBHm_Chr1g0324031 RchiOBHm_Chr5g0066891 RchiOBHm_Chr5g0066901
rosa_laevigata RLG00000030004 RLG00000030235 RLG00000030328 RLG00000030329 RLG00000030334 RLG00000030336 RLG00000030337 RLG00000030338 RLG00000030339 RLG00000030340 RLG00000035885 RLG00000035886 RLG00000035888 RLG00000035890
rosa_multiflora Rmu_co8481685.1_g000001 Rmu_co8485349.1_g000001 Rmu_sc0000605.1_g000061 Rmu_sc0000804.1_g000004 Rmu_sc0000804.1_g000008 Rmu_sc0002263.1_g000074 Rmu_sc0002263.1_g000076 Rmu_sc0002263.1_g000077 Rmu_sc0003418.1_g000005 Rmu_sc0003418.1_g000007 Rmu_sc0003418.1_g000008 Rmu_sc0008378.1_g000013 Rmu_sc0010151.1_g000012
rosa_roxburghii Rroxscaffold_1G00014220 Rroxscaffold_1G00014230 Rroxscaffold_4G00325970 Rroxscaffold_4G00326160 Rroxscaffold_4G00326570 Rroxscaffold_4G00326580 Rroxscaffold_4G00326650 Rroxscaffold_4G00326670 Rroxscaffold_4G00326680 Rroxscaffold_4G00326700
rosa_rugosa Rorug01G0037300 Rorug01G0037400 Rorug01G0037600 Rorug01G0037700 Rorug01G0037800 Rorug01G0037800 Rorug01G0042100 Rorug01G0065000 Rorug05G0379300 Rorug05G0379400
rosa_samantha Rh1AG054700 Rh1AG054900 Rh1AG055000 Rh1AG055200 Rh1AG055300 Rh1BG047500 Rh1CG055800 Rh1CG056000 Rh1CG061400 Rh1DG059900 Rh1DG060200 Rh5AG439100 Rh5AG439200 Rh5BG455900 Rh5CG478000 Rh5CG478300
rosa_wichuraiana Rw1G004750 Rw1G004760 Rw1G004770 Rw1G004790 Rw1G005080 Rw1G006510 Rw5G041060 Rw5G041070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 291
AciI CCGC 1 cut(s) 426
AcsI RAATTY 1 cut(s) 144
AcuI CTGAAG 1 cut(s) 29
AfaI GTAC 1 cut(s) 262
AgsI TTSAA 2 cut(s) 79, 421
AluBI AGCT 4 cut(s) 165, 298, 308, 405
AluI AGCT 4 cut(s) 165, 298, 308, 405
Alw21I GWGCWC 2 cut(s) 300, 310
Alw26I GTCTC 1 cut(s) 19
AlwNI CAGNNNCTG 1 cut(s) 332
Ama87I CYCGRG 1 cut(s) 152
AoxI GGCC 2 cut(s) 149, 349
ApoI RAATTY 1 cut(s) 144
AspS9I GGNCC 3 cut(s) 150, 185, 413
AvaI CYCGRG 1 cut(s) 152
AvaII GGWCC 2 cut(s) 185, 413
AxyI CCTNAGG 1 cut(s) 256
BanII GRGCYC 2 cut(s) 300, 310
BauI CACGAG 1 cut(s) 271
Bbv12I GWGCWC 2 cut(s) 300, 310
BccI CCATC 1 cut(s) 170
BcoDI GTCTC 1 cut(s) 19
BglII AGATCT 1 cut(s) 56
BisI GCNGC 1 cut(s) 426
BlsI GCNGC 1 cut(s) 427
Bme18I GGWCC 2 cut(s) 185, 413
BmeT110I CYCGRG 1 cut(s) 152
BmgT120I GGNCC 3 cut(s) 150, 185, 413
BmiI GGNNCC 1 cut(s) 415
BpmI CTGGAG 1 cut(s) 249
BsaJI CCNNGG 1 cut(s) 352
Bse1I ACTGG 1 cut(s) 145
Bse21I CCTNAGG 1 cut(s) 256
BseDI CCNNGG 1 cut(s) 352
BseGI GGATG 2 cut(s) 346, 403
BseMII CTCAG 1 cut(s) 150
BseNI ACTGG 1 cut(s) 145
BseRI GAGGAG 1 cut(s) 180
BshFI GGCC 2 cut(s) 151, 351
BsiHKAI GWGCWC 2 cut(s) 300, 310
BsiHKCI CYCGRG 1 cut(s) 152
BsmAI GTCTC 1 cut(s) 19
BsmI GAATGC 1 cut(s) 391
BsnI GGCC 2 cut(s) 151, 351
BsoBI CYCGRG 1 cut(s) 152
Bsp1286I GDGCHC 2 cut(s) 300, 310
Bsp143I GATC 1 cut(s) 56
Bsp19I CCATGG 1 cut(s) 352
BspACI CCGC 1 cut(s) 426
BspANI GGCC 2 cut(s) 151, 351
BspCNI CTCAG 1 cut(s) 151
BspLI GGNNCC 1 cut(s) 415
BsrI ACTGG 1 cut(s) 145
BssECI CCNNGG 1 cut(s) 352
BssMI GATC 1 cut(s) 56
BssSI CACGAG 1 cut(s) 271
BssT1I CCWWGG 1 cut(s) 352
Bst2BI CACGAG 1 cut(s) 271
Bst4CI ACNGT 2 cut(s) 106, 376
BstAPI GCANNNNNTGC 1 cut(s) 386
BstDEI CTNAG 3 cut(s) 159, 195, 256
BstDSI CCRYGG 1 cut(s) 352
BstF5I GGATG 2 cut(s) 346, 403
BstKTI GATC 1 cut(s) 59
BstMAI GTCTC 1 cut(s) 19
BstMBI GATC 1 cut(s) 56
BstMWI GCNNNNNNNGC 1 cut(s) 386
BstX2I RGATCY 1 cut(s) 56
BstXI CCANNNNNNTGG 1 cut(s) 273
BstYI RGATCY 1 cut(s) 56
Bsu36I CCTNAGG 1 cut(s) 256
BsuRI GGCC 2 cut(s) 151, 351
BtgI CCRYGG 1 cut(s) 352
BtsCI GGATG 2 cut(s) 346, 403
BtsI GCAGTG 1 cut(s) 363
BtsIMutI CAGTG 3 cut(s) 102, 138, 363
CaiI CAGNNNCTG 1 cut(s) 332
Cfr13I GGNCC 3 cut(s) 150, 185, 413
Csp6I GTAC 1 cut(s) 261
CviAII CATG 4 cut(s) 233, 245, 353, 381
CviJI RGCY 7 cut(s) 151, 165, 298, 308, 351, 405, 425
CviKI_1 RGCY 7 cut(s) 151, 165, 298, 308, 351, 405, 425
CviQI GTAC 1 cut(s) 261
DdeI CTNAG 3 cut(s) 159, 195, 256
DpnI GATC 1 cut(s) 58
DpnII GATC 1 cut(s) 56
DraI TTTAAA 1 cut(s) 169
Ecl136II GAGCTC 2 cut(s) 298, 308
Eco130I CCWWGG 1 cut(s) 352
Eco24I GRGCYC 2 cut(s) 300, 310
Eco32I GATATC 1 cut(s) 118
Eco47I GGWCC 2 cut(s) 185, 413
Eco53kI GAGCTC 2 cut(s) 298, 308
Eco57I CTGAAG 1 cut(s) 29
Eco81I CCTNAGG 1 cut(s) 256
Eco88I CYCGRG 1 cut(s) 152
EcoICRI GAGCTC 2 cut(s) 298, 308
EcoRV GATATC 1 cut(s) 118
EcoT14I CCWWGG 1 cut(s) 352
EcoT38I GRGCYC 2 cut(s) 300, 310
ErhI CCWWGG 1 cut(s) 352
FaeI CATG 4 cut(s) 236, 248, 356, 384
FatI CATG 4 cut(s) 232, 244, 352, 380
Fnu4HI GCNGC 1 cut(s) 426
FokI GGATG 2 cut(s) 353, 410
FriOI GRGCYC 2 cut(s) 300, 310
Fsp4HI GCNGC 1 cut(s) 426
GluI GCNGC 1 cut(s) 426
GsuI CTGGAG 1 cut(s) 249
HaeIII GGCC 2 cut(s) 151, 351
Hin1II CATG 4 cut(s) 236, 248, 356, 384
HinfI GANTC 3 cut(s) 155, 269, 329
Hpy188I TCNGA 3 cut(s) 27, 48, 160
Hpy188III TCNNGA 1 cut(s) 266
HpyCH4III ACNGT 2 cut(s) 106, 376
HpyCH4V TGCA 4 cut(s) 40, 217, 282, 335
HpyF10VI GCNNNNNNNGC 1 cut(s) 386
HpyF3I CTNAG 3 cut(s) 159, 195, 256
Hsp92II CATG 4 cut(s) 236, 248, 356, 384
Kzo9I GATC 1 cut(s) 56
LmnI GCTCC 1 cut(s) 305
LpnPI CCDG 2 cut(s) 126, 279
MalI GATC 1 cut(s) 58
MboI GATC 1 cut(s) 56
MflI RGATCY 1 cut(s) 56
MhlI GDGCHC 2 cut(s) 300, 310
MluCI AATT 1 cut(s) 144
MlyI GAGTC 3 cut(s) 164, 263, 338
MnlI CCTC 3 cut(s) 198, 201, 379
MseI TTAA 1 cut(s) 168
Mva1269I GAATGC 1 cut(s) 391
MwoI GCNNNNNNNGC 1 cut(s) 386
NcoI CCATGG 1 cut(s) 352
NdeII GATC 1 cut(s) 56
NlaIII CATG 4 cut(s) 236, 248, 356, 384
NlaIV GGNNCC 1 cut(s) 415
PctI GAATGC 1 cut(s) 391
PkrI GCNGC 1 cut(s) 427
PleI GAGTC 3 cut(s) 163, 263, 337
PpsI GAGTC 3 cut(s) 163, 263, 337
PsiI TTATAA 1 cut(s) 291
Psp124BI GAGCTC 2 cut(s) 300, 310
PspN4I GGNNCC 1 cut(s) 415
PspPI GGNCC 3 cut(s) 150, 185, 413
PstNI CAGNNNCTG 1 cut(s) 332
PsuI RGATCY 1 cut(s) 56
RsaI GTAC 1 cut(s) 262
RsaNI GTAC 1 cut(s) 261
SacI GAGCTC 2 cut(s) 300, 310
SaqAI TTAA 1 cut(s) 168
SatI GCNGC 1 cut(s) 426
Sau3AI GATC 1 cut(s) 56
Sau96I GGNCC 3 cut(s) 150, 185, 413
SchI GAGTC 3 cut(s) 164, 263, 338
SduI GDGCHC 2 cut(s) 300, 310
SetI ASST 6 cut(s) 167, 257, 262, 300, 310, 407
SinI GGWCC 2 cut(s) 185, 413
Sse9I AATT 1 cut(s) 144
SsiI CCGC 1 cut(s) 426
SspI AATATT 1 cut(s) 36
SstI GAGCTC 2 cut(s) 300, 310
StyI CCWWGG 1 cut(s) 352
TaaI ACNGT 2 cut(s) 106, 376
TaqI TCGA 1 cut(s) 94
TasI AATT 1 cut(s) 144
TauI GCSGC 1 cut(s) 428
Tru1I TTAA 1 cut(s) 168
Tru9I TTAA 1 cut(s) 168
TscAI CASTG 3 cut(s) 109, 145, 370
TspDTI ATGAA 4 cut(s) 17, 221, 261, 357
TspRI CASTG 3 cut(s) 109, 145, 370
VpaK11BI GGWCC 2 cut(s) 185, 413
XapI RAATTY 1 cut(s) 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.