Rorug05G0379300

Subtilisin-like serine endopeptidase family protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
51489762 .. 51491090
1329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0379300.1

Sequence Viewer

Length: 1329 bp
ATGGAGGTGGCGGTGATGGGGAAGGTGGAGGTGGGGACTTGTATACATAAGGAGGAGGAGGTGACGGTGAGGGTGGTGGAGGTGACTTATAAATATAGGGAGGAGGAGGTGGTGGTGACTTGTAGACGTATGGAGGAGGCGGTGATGGAGATGGAGGAGGTGGGGACCTGTAGACGTATGGTGGAGGCGGTGATGGAGAAGGTGGTGGTGGAGATTTGTAAACATAAGGAGGTGGCGGTGATGGAGAAGGAGGTGGCGGGGACTTGTATACATATGGTGGAGGTGGTGAGGGTGATGGTGGGGGTGGAGACTTGTAGACGTAAGGAGGAGGAGGTGATGGAGATGGTGATGGTGGAGACTTGTAAACATAAGGAGGAGGTGGTGACGGAGATGGTGGTGGTGGTGATTTATAAATGTATGGTGGTGGTGGTGAAGGTGATGGGGGTGGTGGAGACTTGTAAACATACGGAGGAGGAGGAGGTGAAGGTGATGGGGGTGGTGGGGACTTGTAGACATAGGGAGGTGGCGGTGAAGGTGATGGGGGTGGAGGAGACTTGTAGACATAGGGAGGAGGAGGTGAAGGTGATGGAGGTGGTGGTGAAGGTGATGGGGGTGGTGGCGACTTGTAGACATAGGGAGGTGGCGGTGAAGGTGATGGAGGTGGTGGTGAAGGTGATGGGGGTGGTGGCGACTTGTAGACATAGGGAGGTGGCGGTGAAGGTGAGGGGGGTGGGGGGGGAGGAGACTTGTAGACATAGGGAGGAGGAGGTGAAGGTGATGGGGGTGGTGGTGAAGGTGATGGGGGTGGTGGCGACTTGTAGACATAGGGAGGTGGCGGTGAAGGTGATGGGGGTGGAGGAGACTTGTAGACATAGGGAGGAGGAGGTGAAGGTGATGGAGGTGGTGGTGAAGGTGATGGGGGTGGTGGCGACTTGTAGACATAGGGAGGTGGCGGTGAAGGTGATGGGGGTGGAGGAGACTTGTAGACATAGGGAGGAGGAGGTGAAGGTGATGGAGGTGGTGGTGAAGGTGATGGGGGTGGTGGCGACTTGTAGACATAGGGAGGTGGCGGTGAAGGTGATGGGGGTGGGGGTGGAGGAGACTTGTAGACATAGGGAGGAGGAGGTGAAGGTGACGGAGGTGGTGGTGAAGGTGATGGGGGTGGTGGAGACTTGTATACATATGGAGGTGGCGGTGAAGGTGATGGGGGTGGTGGTAACTTGTAGACATAAGGAGGTGGAGGTGAAGGTGAGGGTGGCGGGGGATGTATCACATGCTTTAGCGGTGGCGGGGGTGGTGGTGACTTGTATTGCTGTGGAGGGTGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

442

Amino Acids

49.49

Weight (kDa)

6.15

Isoelectric Point (pI)

34.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000257)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46840 AT3G46850 AT5G58820 AT5G58830 AT5G58840 AT5G58840 AT5G58840 AT5G59090 AT5G59090 AT5G59090 AT5G59100 AT5G59120 AT5G59130 AT5G59130 AT5G59130 AT5G59130 AT5G59190
fragaria_vesca FvH4_3g37170 FvH4_7g02830 FvH4_7g02840
malus_domestica MD02G1288900.v1.1 MD02G1289100.v1.1 MD02G1289300.v1.1 MD02G1289400.v1.1 MD02G1289500.v1.1 MD03G1083800.v1.1 MD03G1084000.v1.1 MD07G1037500.v1.1 MD07G1037600.v1.1 MD07G1037700.v1.1 MD07G1039300.v1.1 MD11G1091900.v1.1 MD11G1092000.v1.1
prunus_persica Prupe.2G032800_v2.0.a1 Prupe.2G033000_v2.0.a1 Prupe.2G033100_v2.0.a1 Prupe.2G035100_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067700_v2.0.a1 Prupe.6G067800_v2.0.a1
pyrus_communis pycom02g24440 pycom02g24470 pycom02g24480 pycom02g24500 pycom02g24510 pycom03g06650 pycom07g02730 pycom11g07710 pycom11g07720
rosa_chinensis RchiOBHm_Chr1g0323281 RchiOBHm_Chr1g0323291 RchiOBHm_Chr1g0323311 RchiOBHm_Chr1g0323341 RchiOBHm_Chr1g0323351 RchiOBHm_Chr1g0323371 RchiOBHm_Chr1g0323431 RchiOBHm_Chr1g0323461 RchiOBHm_Chr1g0324031 RchiOBHm_Chr5g0066891 RchiOBHm_Chr5g0066901
rosa_laevigata RLG00000030004 RLG00000030235 RLG00000030328 RLG00000030329 RLG00000030334 RLG00000030336 RLG00000030337 RLG00000030338 RLG00000030339 RLG00000030340 RLG00000035885 RLG00000035886 RLG00000035888 RLG00000035890
rosa_multiflora Rmu_co8481685.1_g000001 Rmu_co8485349.1_g000001 Rmu_sc0000605.1_g000061 Rmu_sc0000804.1_g000004 Rmu_sc0000804.1_g000008 Rmu_sc0002263.1_g000074 Rmu_sc0002263.1_g000076 Rmu_sc0002263.1_g000077 Rmu_sc0003418.1_g000005 Rmu_sc0003418.1_g000007 Rmu_sc0003418.1_g000008 Rmu_sc0008378.1_g000013 Rmu_sc0010151.1_g000012
rosa_roxburghii Rroxscaffold_1G00014220 Rroxscaffold_1G00014230 Rroxscaffold_4G00325970 Rroxscaffold_4G00326160 Rroxscaffold_4G00326570 Rroxscaffold_4G00326580 Rroxscaffold_4G00326650 Rroxscaffold_4G00326670 Rroxscaffold_4G00326680 Rroxscaffold_4G00326700
rosa_rugosa Rorug01G0037300 Rorug01G0037400 Rorug01G0037600 Rorug01G0037700 Rorug01G0037800 Rorug01G0037800 Rorug01G0042100 Rorug01G0065000 Rorug05G0379300 Rorug05G0379400
rosa_samantha Rh1AG054700 Rh1AG054900 Rh1AG055000 Rh1AG055200 Rh1AG055300 Rh1BG047500 Rh1CG055800 Rh1CG056000 Rh1CG061400 Rh1DG059900 Rh1DG060200 Rh5AG439100 Rh5AG439200 Rh5BG455900 Rh5CG478000 Rh5CG478300
rosa_wichuraiana Rw1G004750 Rw1G004760 Rw1G004770 Rw1G004790 Rw1G005080 Rw1G006510 Rw5G041060 Rw5G041070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 90, 411
Alw26I GTCTC 9 cut(s) 302, 350, 446, 545, 737, 854, 971, 1094, 1163
AspS9I GGNCC 1 cut(s) 165
AvaII GGWCC 1 cut(s) 165
BcoDI GTCTC 9 cut(s) 302, 350, 446, 545, 737, 854, 971, 1094, 1163
BfmI CTRYAG 1 cut(s) 169
Bme18I GGWCC 1 cut(s) 165
BmgT120I GGNCC 1 cut(s) 165
BmiI GGNNCC 1 cut(s) 166
BsaXI ACNNNNNCTCC 1 cut(s) 1310
BseGI GGATG 1 cut(s) 1270
BslFI GGGAC 4 cut(s) 49, 178, 274, 517
BsmAI GTCTC 9 cut(s) 302, 350, 446, 545, 737, 854, 971, 1094, 1163
BsmFI GGGAC 4 cut(s) 49, 178, 274, 517
BspLI GGNNCC 1 cut(s) 166
BssNAI GTATAC 3 cut(s) 44, 269, 1178
Bst1107I GTATAC 3 cut(s) 44, 269, 1178
Bst4CI ACNGT 1 cut(s) 67
BstF5I GGATG 1 cut(s) 1270
BstMAI GTCTC 9 cut(s) 302, 350, 446, 545, 737, 854, 971, 1094, 1163
BstNSI RCATGY 1 cut(s) 1277
BstSFI CTRYAG 1 cut(s) 169
BstZ17I GTATAC 3 cut(s) 44, 269, 1178
BtsCI GGATG 1 cut(s) 1270
Cfr13I GGNCC 1 cut(s) 165
CviAII CATG 1 cut(s) 1274
Eco47I GGWCC 1 cut(s) 165
EcoO109I RGGNCCY 1 cut(s) 165
FaeI CATG 1 cut(s) 1277
FaqI GGGAC 4 cut(s) 49, 178, 274, 517
FatI CATG 1 cut(s) 1273
FauI CCCGC 3 cut(s) 250, 1252, 1282
FauNDI CATATG 2 cut(s) 273, 1182
FokI GGATG 1 cut(s) 1277
Hin1II CATG 1 cut(s) 1277
HpyCH4III ACNGT 1 cut(s) 67
HpyCH4IV ACGT 3 cut(s) 127, 175, 319
HpySE526I ACGT 3 cut(s) 127, 175, 319
Hsp92II CATG 1 cut(s) 1277
LpnPI CCDG 1 cut(s) 181
MaeII ACGT 3 cut(s) 127, 175, 319
MaeIII GTNAC 7 cut(s) 61, 82, 115, 382, 1132, 1216, 1300
NdeI CATATG 2 cut(s) 273, 1182
NlaIII CATG 1 cut(s) 1277
NlaIV GGNNCC 1 cut(s) 166
NmuCI GTSAC 6 cut(s) 61, 82, 115, 382, 1132, 1300
NspI RCATGY 1 cut(s) 1277
PpuMI RGGWCCY 1 cut(s) 165
PsiI TTATAA 2 cut(s) 90, 411
Psp5II RGGWCCY 1 cut(s) 165
PspN4I GGNNCC 1 cut(s) 166
PspPI GGNCC 1 cut(s) 165
PspPPI RGGWCCY 1 cut(s) 165
Sau96I GGNCC 1 cut(s) 165
SfcI CTRYAG 1 cut(s) 169
SinI GGWCC 1 cut(s) 165
TaaI ACNGT 1 cut(s) 67
TaiI ACGT 3 cut(s) 130, 178, 322
TseFI GTSAC 6 cut(s) 61, 82, 115, 382, 1132, 1300
Tsp45I GTSAC 6 cut(s) 61, 82, 115, 382, 1132, 1300
TspGWI ACGGA 3 cut(s) 401, 482, 1151
VpaK11BI GGWCC 1 cut(s) 165
XceI RCATGY 1 cut(s) 1277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.