Rroxscaffold_1G00014220

Subtilisin-like serine endopeptidase family protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
17517290 .. 17521807
4518 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00014220.1

Sequence Viewer

Length: 2211 bp
ATGAAGACAGAAAGGTCCATATTGTGTACATGGGGTCACTTCCATATAAGGAGTGCTCTCCATTTTCTCATCACCATGGTATGCTTCAGACTGTTGTCCATAGCAGATATGAAGGAAGTAGTATCTGTCTTCCCGAGCACAGCATTACAACTTCAAACAAGAAGATCTTGGGACTTCATGGGTTTCACTGAGAAAATTGATAGACGAGGCAATGTTGAGAGTGATATTATTGTGGATGTGATTGACTCTGGGATTTGGCCTGAATCAGAAAGCTTCAATGACGAAGTTTTTGGTCCTCCTCCTAAGAAGTGGAAAGGTGCTTGTATGGGCGGCTTCAATTTCACTTGCAATAATTTGAGCTTATTGTGCAAAGCCAATGATGAAGATAGGAAGGTTCACATTGTATACTTAGGGTCACTTCCTAATACGGTGTACTCACCATCGTCTCACCACCTTGGTATATTACAGAAAGTTGTCCAGGGAAGAGGTTCTCTCGAAAATTACCTGATCAGAAGCTACAAAAGGAGTTTCAATGGATTTGCTGCCAATCTGACTGACCAGGAAAGAGAAAAACTTGCTAACATGAAGGAAGTAGTCTCCATCTTTCAGAGCACAAAATTCAAACTCCAAACAACAAGATCTTGGGATTTTATGGGATTCCATGAGTGTATCAACCGAAATGCTACTATCGAAAGTGATGTAATTATTGGTGTTATTGATAGTGGAATTTGGCCTGAATCAGAGAGCTTTCAAGTCAAAGGCTTTGGTCTGGCTCCTAAAAAGTGGAAAGGTGCTTGCAATGGAGGCAAGAATTTCACTTGCAACAACAAACTCATTGGAGCTCGGTATTACTCATCACTGCAGTCTGCAAGAGATGAAGTTGGTCATGGAAGCCACACTGCTTCAACAGCAGCAGGGAATGTTGTGAAGGGTGTTAGCTTTTACGGACTAGCACAAGGTACTGCAAGAGGAGGAGTTCCCTCTGCAAGAATTGCAGCATATCAAGTATGTGATTTGGATTCATTCTGTAGTGGACATGATGTGTTGGCTGCTTTCGATGATGCCATTGCTGATGGAGTTGACATCATTACACTTTCCATCGGAACAGATCTTCGATCTGAATTTTACAAGGATCCTATTGCAATTGGTTCTTTTCATGGCATGGCAAAAGGGATACTAACCTCCAACTCTGCTGGCAATGAAGGTCCTGCAGGCGATACTGTGTCAAGTGCAGCACCTTGGACACTTACAGTTGCAGCAAGTAGCATTGATCGTCGGATCATTGACAAGGTTGTTCTTGGAAATGGAAGCATACTAGTCGGAAAGATTGTGCTATGTGATGCATTCGCTGAAGCAGATTTTGTGGCTCATAAAGCTGGTGCACTAGGTTCTATTTTAAATAATGACGGAACTGGTGATTTTTCTGATGTTGTCTCATTACCTGCAATAGCTTTAAGCTATGAAAACTATAATGCAGTCAAGTTTTACATGAGCTCCACTAGAGATCCTCGAGCAAACATATTAAGAAGTGAAGTCATAAATGACCCGGCTGCACCAATTGTCGCTTCCTTCTCTTCACGTGGACCGAATCCAATTACACCTGACATTATAAAGCCAGATATAACTGCGCCTGGTGTAGACATTTTGGCTGCATATTCGACTGTTGCCTCAATTTCAGAGAGCCCTGATCGAAGACAAGAGGCATGTAAATTTGCTTATGGATCTGGACATGTCAATCCTGTAAAAGCTATAGATCCCGGGCTTGTTTATGAAACTTCTAAAGAAGATTTCATAAACCTACTTTGCATGGACTATGATCAAGCCAAAGTGAGACTGATATCAGGAGATAACAGCACTTGCCCTACAGGCTCTGACAAAGGATCACCAAAGGATCTTAACTACCCTTCAATGGCTGCAGCAAACATTACACCGAAGAAACCTTTTACGATTAACTTTCATAGAACAGTTAAAAATGTTGGCCTTGCAAACTCTACTTACAATGCCACCATCTTCCAAAGTTCCAAAGACGTGGATATCAAAGTTGTGCCTGAATTTCTATCCTTCAAGTCCTTGAATGAGGAGAAGAGCTTTGATGTGGTTGTTGTTGGAAAAGGTTTGATAGGTGGATCACTAATTTCTTCGTCACTGGTTTGGTCTGATGGTATTCATAACGTTAGGAGTCCAGTTGTGGTGCGTACTGAGATAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

736

Amino Acids

79.65

Weight (kDa)

6.34

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 132 - 210 1.9e-13 Peptidase inhibitor I9
Peptidase_S8 PF00082 232 - 554 3.7e-26 Subtilase family
fn3_6 PF17766 631 - 731 8.9e-23 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000257)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46840 AT3G46850 AT5G58820 AT5G58830 AT5G58840 AT5G58840 AT5G58840 AT5G59090 AT5G59090 AT5G59090 AT5G59100 AT5G59120 AT5G59130 AT5G59130 AT5G59130 AT5G59130 AT5G59190
fragaria_vesca FvH4_3g37170 FvH4_7g02830 FvH4_7g02840
malus_domestica MD02G1288900.v1.1 MD02G1289100.v1.1 MD02G1289300.v1.1 MD02G1289400.v1.1 MD02G1289500.v1.1 MD03G1083800.v1.1 MD03G1084000.v1.1 MD07G1037500.v1.1 MD07G1037600.v1.1 MD07G1037700.v1.1 MD07G1039300.v1.1 MD11G1091900.v1.1 MD11G1092000.v1.1
prunus_persica Prupe.2G032800_v2.0.a1 Prupe.2G033000_v2.0.a1 Prupe.2G033100_v2.0.a1 Prupe.2G035100_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067700_v2.0.a1 Prupe.6G067800_v2.0.a1
pyrus_communis pycom02g24440 pycom02g24470 pycom02g24480 pycom02g24500 pycom02g24510 pycom03g06650 pycom07g02730 pycom11g07710 pycom11g07720
rosa_chinensis RchiOBHm_Chr1g0323281 RchiOBHm_Chr1g0323291 RchiOBHm_Chr1g0323311 RchiOBHm_Chr1g0323341 RchiOBHm_Chr1g0323351 RchiOBHm_Chr1g0323371 RchiOBHm_Chr1g0323431 RchiOBHm_Chr1g0323461 RchiOBHm_Chr1g0324031 RchiOBHm_Chr5g0066891 RchiOBHm_Chr5g0066901
rosa_laevigata RLG00000030004 RLG00000030235 RLG00000030328 RLG00000030329 RLG00000030334 RLG00000030336 RLG00000030337 RLG00000030338 RLG00000030339 RLG00000030340 RLG00000035885 RLG00000035886 RLG00000035888 RLG00000035890
rosa_multiflora Rmu_co8481685.1_g000001 Rmu_co8485349.1_g000001 Rmu_sc0000605.1_g000061 Rmu_sc0000804.1_g000004 Rmu_sc0000804.1_g000008 Rmu_sc0002263.1_g000074 Rmu_sc0002263.1_g000076 Rmu_sc0002263.1_g000077 Rmu_sc0003418.1_g000005 Rmu_sc0003418.1_g000007 Rmu_sc0003418.1_g000008 Rmu_sc0008378.1_g000013 Rmu_sc0010151.1_g000012
rosa_roxburghii Rroxscaffold_1G00014220 Rroxscaffold_1G00014230 Rroxscaffold_4G00325970 Rroxscaffold_4G00326160 Rroxscaffold_4G00326570 Rroxscaffold_4G00326580 Rroxscaffold_4G00326650 Rroxscaffold_4G00326670 Rroxscaffold_4G00326680 Rroxscaffold_4G00326700
rosa_rugosa Rorug01G0037300 Rorug01G0037400 Rorug01G0037600 Rorug01G0037700 Rorug01G0037800 Rorug01G0037800 Rorug01G0042100 Rorug01G0065000 Rorug05G0379300 Rorug05G0379400
rosa_samantha Rh1AG054700 Rh1AG054900 Rh1AG055000 Rh1AG055200 Rh1AG055300 Rh1BG047500 Rh1CG055800 Rh1CG056000 Rh1CG061400 Rh1DG059900 Rh1DG060200 Rh5AG439100 Rh5AG439200 Rh5BG455900 Rh5CG478000 Rh5CG478300
rosa_wichuraiana Rw1G004750 Rw1G004760 Rw1G004770 Rw1G004790 Rw1G005080 Rw1G006510 Rw5G041060 Rw5G041070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1610
AasI GACNNNNNNGTC 1 cut(s) 13
Acc36I ACCTGC 1 cut(s) 1450
AccI GTMKAC 2 cut(s) 405, 1638
AciI CCGC 1 cut(s) 330
AclI AACGTT 1 cut(s) 2172
AclWI GGATC 9 cut(s) 1127, 1140, 1286, 1499, 1729, 1748, 1888, 1899, 2134
AcsI RAATTY 6 cut(s) 617, 726, 811, 1121, 1709, 2051
AcuI CTGAAG 2 cut(s) 70, 1371
AcvI CACGTG 1 cut(s) 1580
AfaI GTAC 4 cut(s) 28, 434, 961, 2197
AfiI CCNNNNNNNGG 1 cut(s) 1909
AflIII ACRYGT 1 cut(s) 1729
AhlI ACTAGT 1 cut(s) 1315
AjiI CACGTC 1 cut(s) 2029
AjnI CCWGG 3 cut(s) 477, 558, 1630
AjuI GAANNNNNNNTTGG 2 cut(s) 1549, 1581
Alw21I GWGCWC 6 cut(s) 58, 140, 614, 844, 1384, 1496
Alw26I GTCTC 4 cut(s) 450, 601, 1438, 1825
Alw44I GTGCAC 1 cut(s) 1380
AlwI GGATC 9 cut(s) 1127, 1140, 1286, 1499, 1729, 1748, 1888, 1899, 2134
AlwNI CAGNNNCTG 1 cut(s) 1871
Ama87I CYCGRG 3 cut(s) 133, 1509, 1757
AoxI GGCC 3 cut(s) 257, 731, 1978
ApaLI GTGCAC 1 cut(s) 1380
ApoI RAATTY 6 cut(s) 617, 726, 811, 1121, 1709, 2051
ArsI GACNNNNNNTTYG 2 cut(s) 272, 304
Asp700I GAANNNNTTC 1 cut(s) 487
AspLEI GCGC 1 cut(s) 1630
AspS9I GGNCC 4 cut(s) 15, 293, 1205, 1583
AsuC2I CCSGG 3 cut(s) 1547, 1758, 1759
AsuHPI GGTGA 5 cut(s) 64, 429, 440, 1427, 1875
AvaI CYCGRG 3 cut(s) 133, 1509, 1757
AvaII GGWCC 4 cut(s) 15, 293, 1205, 1583
BaeGI GKGCMC 1 cut(s) 1384
BamHI GGATCC 1 cut(s) 1132
BanII GRGCYC 3 cut(s) 844, 1496, 1685
BbrPI CACGTG 1 cut(s) 1580
BbsI GAAGAC 3 cut(s) 11, 121, 1699
Bbv12I GWGCWC 6 cut(s) 58, 140, 614, 844, 1384, 1496
BccI CCATC 6 cut(s) 448, 608, 1067, 1106, 2015, 2153
BcgI CGANNNNNNTGC 2 cut(s) 1300, 1334
BciT130I CCWGG 3 cut(s) 479, 560, 1632
BciVI GTATCC 1 cut(s) 1167
BclI TGATCA 2 cut(s) 507, 1816
BcnI CCSGG 3 cut(s) 1547, 1758, 1759
BcoDI GTCTC 4 cut(s) 450, 601, 1438, 1825
BcuI ACTAGT 1 cut(s) 1315
BfaI CTAG 4 cut(s) 950, 1316, 1385, 1500
BfmI CTRYAG 6 cut(s) 860, 1027, 1209, 1749, 1863, 1914
BfuAI ACCTGC 1 cut(s) 1450
BfuI GTATCC 1 cut(s) 1167
BglI GCCNNNNNGGC 1 cut(s) 1866
BglII AGATCT 3 cut(s) 164, 638, 1108
Bme1390I CCNGG 6 cut(s) 479, 560, 1547, 1632, 1758, 1759
Bme18I GGWCC 4 cut(s) 15, 293, 1205, 1583
BmeT110I CYCGRG 3 cut(s) 133, 1509, 1757
BmgBI CACGTC 1 cut(s) 2029
BmgT120I GGNCC 4 cut(s) 15, 293, 1205, 1583
BmiI GGNNCC 2 cut(s) 774, 1134
BmrFI CCNGG 6 cut(s) 479, 560, 1547, 1632, 1758, 1759
BmsI GCATC 2 cut(s) 1051, 1330
BoxI GACNNNNGTC 1 cut(s) 94
BpiI GAAGAC 3 cut(s) 11, 121, 1699
BplI GAGNNNNNCTC 2 cut(s) 477, 509
BpuMI CCSGG 3 cut(s) 1547, 1758, 1759
BsaAI YACGTR 1 cut(s) 1580
BsaJI CCNNGG 5 cut(s) 75, 454, 478, 1238, 1757
BsaXI ACNNNNNCTCC 2 cut(s) 1478, 1508
Bsc4I CCNNNNNNNGG 1 cut(s) 1909
Bse1I ACTGG 3 cut(s) 1417, 2151, 2183
Bse3DI GCAATG 4 cut(s) 217, 805, 1065, 1204
BseBI CCWGG 3 cut(s) 479, 560, 1632
BseDI CCNNGG 5 cut(s) 75, 454, 478, 1238, 1757
BseGI GGATG 1 cut(s) 241
BseLI CCNNNNNNNGG 1 cut(s) 1909
BseMI GCAATG 4 cut(s) 217, 805, 1065, 1204
BseMII CTCAG 2 cut(s) 180, 2190
BseNI ACTGG 3 cut(s) 1417, 2151, 2183
BseRI GAGGAG 4 cut(s) 288, 984, 987, 2093
BseSI GKGCMC 1 cut(s) 1384
BsgI GTGCAG 2 cut(s) 1251, 1536
BshFI GGCC 3 cut(s) 259, 733, 1980
BsiHKAI GWGCWC 6 cut(s) 58, 140, 614, 844, 1384, 1496
BsiHKCI CYCGRG 3 cut(s) 133, 1509, 1757
BsiSI CCGG 2 cut(s) 1547, 1758
BslFI GGGAC 1 cut(s) 185
BslI CCNNNNNNNGG 1 cut(s) 1909
BsmAI GTCTC 4 cut(s) 450, 601, 1438, 1825
BsmBI CGTCTC 1 cut(s) 450
BsmFI GGGAC 1 cut(s) 185
BsmI GAATGC 1 cut(s) 1343
BsnI GGCC 3 cut(s) 259, 733, 1980
BsoBI CYCGRG 3 cut(s) 133, 1509, 1757
Bsp1286I GDGCHC 7 cut(s) 58, 140, 614, 844, 1384, 1496, 1685
Bsp1407I TGTACA 1 cut(s) 26
Bsp19I CCATGG 1 cut(s) 75
BspACI CCGC 1 cut(s) 330
BspANI GGCC 3 cut(s) 259, 733, 1980
BspCNI CTCAG 2 cut(s) 181, 2191
BspLI GGNNCC 2 cut(s) 774, 1134
BspMAI CTGCAG 3 cut(s) 864, 1213, 1918
BspMI ACCTGC 1 cut(s) 1450
BspPI GGATC 9 cut(s) 1127, 1140, 1286, 1499, 1729, 1748, 1888, 1899, 2134
BspQI GCTCTTC 1 cut(s) 2078
BsrDI GCAATG 4 cut(s) 217, 805, 1065, 1204
BsrGI TGTACA 1 cut(s) 26
BsrI ACTGG 3 cut(s) 1417, 2151, 2183
BssECI CCNNGG 5 cut(s) 75, 454, 478, 1238, 1757
BssNAI GTATAC 1 cut(s) 406
BssT1I CCWWGG 3 cut(s) 75, 454, 1238
Bst1107I GTATAC 1 cut(s) 406
Bst2UI CCWGG 3 cut(s) 479, 560, 1632
Bst4CI ACNGT 6 cut(s) 93, 430, 1222, 1252, 1663, 1966
Bst6I CTCTTC 3 cut(s) 478, 1579, 2078
BstAPI GCANNNNNTGC 1 cut(s) 992
BstAUI TGTACA 1 cut(s) 26
BstBAI YACGTR 1 cut(s) 1580
BstC8I GCNNGC 3 cut(s) 796, 1195, 1213
BstDEI CTNAG 4 cut(s) 189, 303, 409, 2199
BstDSI CCRYGG 1 cut(s) 75
BstF5I GGATG 1 cut(s) 241
BstHHI GCGC 1 cut(s) 1630
BstMAI GTCTC 4 cut(s) 450, 601, 1438, 1825
BstMWI GCNNNNNNNGC 6 cut(s) 366, 804, 908, 992, 1373, 1866
BstNI CCWGG 3 cut(s) 479, 560, 1632
BstNSI RCATGY 2 cut(s) 1707, 1733
BstPAI GACNNNNGTC 1 cut(s) 94
BstSCI CCNGG 6 cut(s) 477, 558, 1545, 1630, 1756, 1757
BstSFI CTRYAG 6 cut(s) 860, 1027, 1209, 1749, 1863, 1914
BstSLI GKGCMC 1 cut(s) 1384
BstV2I GAAGAC 3 cut(s) 11, 121, 1699
BstX2I RGATCY 8 cut(s) 164, 638, 1108, 1132, 1504, 1721, 1753, 1891
BstXI CCANNNNNNTGG 1 cut(s) 2029
BstYI RGATCY 8 cut(s) 164, 638, 1108, 1132, 1504, 1721, 1753, 1891
BstZ17I GTATAC 1 cut(s) 406
BsuI GTATCC 1 cut(s) 1167
BsuRI GGCC 3 cut(s) 259, 733, 1980
BtgI CCRYGG 1 cut(s) 75
BtrI CACGTC 1 cut(s) 2029
BtsCI GGATG 1 cut(s) 241
BtsI GCAGTG 2 cut(s) 857, 897
BtsIMutI CAGTG 4 cut(s) 186, 857, 897, 2144
BveI ACCTGC 1 cut(s) 1450
Cac8I GCNNGC 3 cut(s) 796, 1195, 1213
CaiI CAGNNNCTG 1 cut(s) 1871
CfoI GCGC 1 cut(s) 1630
Cfr13I GGNCC 4 cut(s) 15, 293, 1205, 1583
Cfr9I CCCGGG 1 cut(s) 1757
Csp6I GTAC 4 cut(s) 27, 433, 960, 2196
CviQI GTAC 4 cut(s) 27, 433, 960, 2196
DdeI CTNAG 4 cut(s) 189, 303, 409, 2199
DraI TTTAAA 1 cut(s) 1398
DrdI GACNNNNNNGTC 1 cut(s) 13
DseDI GACNNNNNNGTC 1 cut(s) 13
Eam1104I CTCTTC 3 cut(s) 478, 1579, 2078
EarI CTCTTC 3 cut(s) 478, 1579, 2078
Ecl136II GAGCTC 2 cut(s) 842, 1494
Eco130I CCWWGG 3 cut(s) 75, 454, 1238
Eco24I GRGCYC 3 cut(s) 844, 1496, 1685
Eco32I GATATC 2 cut(s) 1839, 2035
Eco47I GGWCC 4 cut(s) 15, 293, 1205, 1583
Eco53kI GAGCTC 2 cut(s) 842, 1494
Eco57I CTGAAG 2 cut(s) 70, 1371
Eco72I CACGTG 1 cut(s) 1580
Eco88I CYCGRG 3 cut(s) 133, 1509, 1757
EcoICRI GAGCTC 2 cut(s) 842, 1494
EcoO109I RGGNCCY 1 cut(s) 1205
EcoRII CCWGG 3 cut(s) 477, 558, 1630
EcoRV GATATC 2 cut(s) 1839, 2035
EcoT14I CCWWGG 3 cut(s) 75, 454, 1238
EcoT22I ATGCAT 1 cut(s) 1345
EcoT38I GRGCYC 3 cut(s) 844, 1496, 1685
ErhI CCWWGG 3 cut(s) 75, 454, 1238
Esp3I CGTCTC 1 cut(s) 450
FalI AAGNNNNNCTT 2 cut(s) 151, 183
FaqI GGGAC 1 cut(s) 185
FbaI TGATCA 2 cut(s) 507, 1816
FblI GTMKAC 2 cut(s) 405, 1638
FokI GGATG 1 cut(s) 248
FriOI GRGCYC 3 cut(s) 844, 1496, 1685
FspBI CTAG 4 cut(s) 950, 1316, 1385, 1500
GlaI GCGC 1 cut(s) 1629
HaeIII GGCC 3 cut(s) 259, 733, 1980
HapII CCGG 2 cut(s) 1547, 1758
HhaI GCGC 1 cut(s) 1630
Hin6I GCGC 1 cut(s) 1628
HinP1I GCGC 1 cut(s) 1628
HincII GTYRAC 1 cut(s) 1081
HindII GTYRAC 1 cut(s) 1081
HindIII AAGCTT 1 cut(s) 271
HinfI GANTC 7 cut(s) 245, 263, 657, 737, 1019, 1588, 2179
HpaII CCGG 2 cut(s) 1547, 1758
HphI GGTGA 5 cut(s) 64, 429, 440, 1427, 1875
Hpy166II GTNNAC 9 cut(s) 27, 397, 406, 433, 1034, 1081, 1382, 1583, 1639
Hpy188III TCNNGA 4 cut(s) 133, 494, 1725, 1842
Hpy8I GTNNAC 9 cut(s) 27, 397, 406, 433, 1034, 1081, 1382, 1583, 1639
Hpy99I CGWCG 1 cut(s) 1278
HpyAV CCTTC 8 cut(s) 106, 385, 580, 922, 1196, 1579, 1914, 2071
HpyCH4III ACNGT 6 cut(s) 93, 430, 1222, 1252, 1663, 1966
HpyCH4IV ACGT 3 cut(s) 1579, 2028, 2172
HpyF10VI GCNNNNNNNGC 6 cut(s) 366, 804, 908, 992, 1373, 1866
HpyF3I CTNAG 4 cut(s) 189, 303, 409, 2199
HpySE526I ACGT 3 cut(s) 1579, 2028, 2172
HspAI GCGC 1 cut(s) 1628
Ksp22I TGATCA 2 cut(s) 507, 1816
LguI GCTCTTC 1 cut(s) 2078
LmnI GCTCC 3 cut(s) 778, 839, 1499
LweI GCATC 2 cut(s) 1051, 1330
MaeI CTAG 4 cut(s) 950, 1316, 1385, 1500
MaeII ACGT 3 cut(s) 1579, 2028, 2172
MaeIII GTNAC 3 cut(s) 35, 414, 2142
MfeI CAATTG 2 cut(s) 1143, 1557
MflI RGATCY 8 cut(s) 164, 638, 1108, 1132, 1504, 1721, 1753, 1891
MhlI GDGCHC 7 cut(s) 58, 140, 614, 844, 1384, 1496, 1685
MlyI GAGTC 2 cut(s) 239, 2188
MmeI TCCRAC 4 cut(s) 1209, 1256, 1300, 2086
Mph1103I ATGCAT 1 cut(s) 1345
MroXI GAANNNNTTC 1 cut(s) 487
MseI TTAA 6 cut(s) 1397, 1454, 1523, 1896, 1950, 1968
MslI CAYNNNNRTG 1 cut(s) 74
MspI CCGG 2 cut(s) 1547, 1758
MspR9I CCNGG 6 cut(s) 479, 560, 1547, 1632, 1758, 1759
MunI CAATTG 2 cut(s) 1143, 1557
Mva1269I GAATGC 1 cut(s) 1343
MvaI CCWGG 3 cut(s) 479, 560, 1632
MwoI GCNNNNNNNGC 6 cut(s) 366, 804, 908, 992, 1373, 1866
NciI CCSGG 3 cut(s) 1547, 1758, 1759
NcoI CCATGG 1 cut(s) 75
NlaIV GGNNCC 2 cut(s) 774, 1134
NmuCI GTSAC 3 cut(s) 35, 414, 2142
NsiI ATGCAT 1 cut(s) 1345
NspI RCATGY 2 cut(s) 1707, 1733
PaeR7I CTCGAG 1 cut(s) 1509
PciI ACATGT 1 cut(s) 1729
PciSI GCTCTTC 1 cut(s) 2078
PctI GAATGC 1 cut(s) 1343
PdmI GAANNNNTTC 1 cut(s) 487
PfeI GAWTC 5 cut(s) 263, 657, 737, 1019, 1588
PleI GAGTC 2 cut(s) 239, 2187
PmaCI CACGTG 1 cut(s) 1580
PmlI CACGTG 1 cut(s) 1580
PpsI GAGTC 2 cut(s) 239, 2187
Ppu21I YACGTR 1 cut(s) 1580
PpuMI RGGWCCY 1 cut(s) 1205
PscI ACATGT 1 cut(s) 1729
PshAI GACNNNNGTC 1 cut(s) 94
PsiI TTATAA 1 cut(s) 1610
Psp124BI GAGCTC 2 cut(s) 844, 1496
Psp1406I AACGTT 1 cut(s) 2172
Psp5II RGGWCCY 1 cut(s) 1205
Psp6I CCWGG 3 cut(s) 477, 558, 1630
PspCI CACGTG 1 cut(s) 1580
PspGI CCWGG 3 cut(s) 477, 558, 1630
PspN4I GGNNCC 2 cut(s) 774, 1134
PspPI GGNCC 4 cut(s) 15, 293, 1205, 1583
PspPPI RGGWCCY 1 cut(s) 1205
PspXI VCTCGAGB 1 cut(s) 1509
PstI CTGCAG 3 cut(s) 864, 1213, 1918
PstNI CAGNNNCTG 1 cut(s) 1871
PsuI RGATCY 8 cut(s) 164, 638, 1108, 1132, 1504, 1721, 1753, 1891
RsaI GTAC 4 cut(s) 28, 434, 961, 2197
RsaNI GTAC 4 cut(s) 27, 433, 960, 2196
RseI CAYNNNNRTG 1 cut(s) 74
SacI GAGCTC 2 cut(s) 844, 1496
SapI GCTCTTC 1 cut(s) 2078
SaqAI TTAA 6 cut(s) 1397, 1454, 1523, 1896, 1950, 1968
Sau96I GGNCC 4 cut(s) 15, 293, 1205, 1583
SbfI CCTGCAGG 1 cut(s) 1213
SchI GAGTC 2 cut(s) 239, 2188
ScrFI CCNGG 6 cut(s) 479, 560, 1547, 1632, 1758, 1759
SdaI CCTGCAGG 1 cut(s) 1213
SduI GDGCHC 7 cut(s) 58, 140, 614, 844, 1384, 1496, 1685
SfaNI GCATC 2 cut(s) 1051, 1330
SfcI CTRYAG 6 cut(s) 860, 1027, 1209, 1749, 1863, 1914
Sfr274I CTCGAG 1 cut(s) 1509
SinI GGWCC 4 cut(s) 15, 293, 1205, 1583
SlaI CTCGAG 1 cut(s) 1509
SmaI CCCGGG 1 cut(s) 1759
SmiMI CAYNNNNRTG 1 cut(s) 74
SmlI CTYRAG 1 cut(s) 1509
SmoI CTYRAG 1 cut(s) 1509
SpeI ACTAGT 1 cut(s) 1315
Sse8387I CCTGCAGG 1 cut(s) 1213
SsiI CCGC 1 cut(s) 330
SspMI CTAG 4 cut(s) 950, 1316, 1385, 1500
SstI GAGCTC 2 cut(s) 844, 1496
StyD4I CCNGG 6 cut(s) 477, 558, 1545, 1630, 1756, 1757
StyI CCWWGG 3 cut(s) 75, 454, 1238
TaaI ACNGT 6 cut(s) 93, 430, 1222, 1252, 1663, 1966
TaiI ACGT 3 cut(s) 1582, 2031, 2175
TaqI TCGA 7 cut(s) 495, 690, 1056, 1114, 1510, 1658, 1690
TaqII GACCGA 1 cut(s) 1600
TatI WGTACW 2 cut(s) 26, 432
TauI GCSGC 1 cut(s) 333
TfiI GAWTC 5 cut(s) 263, 657, 737, 1019, 1588
Tru1I TTAA 6 cut(s) 1397, 1454, 1523, 1896, 1950, 1968
Tru9I TTAA 6 cut(s) 1397, 1454, 1523, 1896, 1950, 1968
TscAI CASTG 4 cut(s) 193, 864, 904, 2151
TseFI GTSAC 3 cut(s) 35, 414, 2142
Tsp45I GTSAC 3 cut(s) 35, 414, 2142
TspGWI ACGGA 2 cut(s) 960, 1422
TspMI CCCGGG 1 cut(s) 1757
TspRI CASTG 4 cut(s) 193, 864, 904, 2151
VneI GTGCAC 1 cut(s) 1380
VpaK11BI GGWCC 4 cut(s) 15, 293, 1205, 1583
XapI RAATTY 6 cut(s) 617, 726, 811, 1121, 1709, 2051
XceI RCATGY 2 cut(s) 1707, 1733
XhoI CTCGAG 1 cut(s) 1509
XmaI CCCGGG 1 cut(s) 1757
XmiI GTMKAC 2 cut(s) 405, 1638
XmnI GAANNNNTTC 1 cut(s) 487
XspI CTAG 4 cut(s) 950, 1316, 1385, 1500
Zsp2I ATGCAT 1 cut(s) 1345
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.