Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000257

Physical Location & Seq

Genomic Coordinates Forward (+)

23885855 .. 23888673

Gene Structure 2819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G59190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGGGAACACTTCCTGAGATTAAGTACTCACCTCCCTCTCACCATCTCAGTATACTCCAAAAACTTGTTGGCACTATTGCTGCATCGCATTTGTTAGTTAGAAGTTATAAAAGGAGCTTCAATGGATTCGCTGCCAATCTATCTCAAGCCGAGAGTCAGAAACTGCAAAATATGAAAGAGGTAGTGTCAGTGTTTCCAAGCAAGAGTCATGAACTGACGACAACAAGATCATGGGACTTTGTCGGATTTGGCGAGAAAGCGAGACGAGAGAGTGTGAAAGAAAGTGATGTTATTGTCGGAGTGATTGACAGTGGAATCTGGCCGGAATCTGAGAGCTTTGACGACGAAGGTTTTGGTCCGCCTCCAAAAAAATGGAAAGGTTCCTGTAAAGGTGGCCTAAAATTCGCTTGCAACAACAAGCTCATCGGAGCTAGGTTTTACAATAAATTTGCCGACTCAGCAAGAGATGAGGAAGGCCATGGAACCCACACTGCGTCAACGGCTGCTGGTAATGCGGTTCAAGCTGCTAGCTTCTACGGTTTGGCTCAAGGTACTGCTCGTGGTGGAGTTCCCTCGGCGAGAATAGCCGCATATAAAGTCTGCTTCAACCGCTGCAACGATGTAGATATTCTGGCTGCGTTTGATGATGCCATTGCCGATGGTGTTGATGTTATCTCGATCTCAATCTCAGCCGATTACGTCTCCAATTTATTAAACGCTTCTGTAGCCATTGGTTCTTTTCACGCAATGATGAGAGGAATCATCACGGCAGGTTCAGCTGGGAACAATGGGCCTGATCAAGGTTCGGTGGCTAATGTATCGCCATGGATGATAACCGTTGCAGCCAGCGGTACGGACCGGCAGTTCATTGACAGAGTCGTTCTTGGTAACGGAAAAGCATTAACGGGTATATCAGTTAATACATTCAATCTCAATGGGACAAAGTTCCCGATCGTTTACGGCCAAAACGTGTCGAGAAATTGTTCCCAAGCCCAAGCCGGTTATTGTTCAAGTGGGTGTGTGGATAGTGAGCTGGTGAAAGGGAAGATCGTTCTATGTGACGACTTCCTAGGATATAGAGAAGCTTACTTAGCTGGAGCCATTGGAGTCATTGTTCAAAACACATTGCTTCCAGACAGCGCATTTGTGGTTCCCTTTCCTGCCTCTTCTCTGGGATTTGAGGACTACAAATCTATCAAGTCATACATTGAATCTGCAGAGCCTCCACAAGCAGAGATACTAAGAACCGAGGAGATAGTAGATAGAGAAGCTCCATATGTTCCATCTTTTTCTTCTCGCGGGCCAAGTTTCGTCATTCAGAACCTCTTGAAGCCTGACGTAAGTGCACCTGGATTAGAGATTCTGGCTGCATTTTCTCCGGTAGCTTCTCCTTCAAGTTTTTTGAACCCTGAGGACAAGAGAAGTGTGAGGTATAGTGTAATGAGTGGCACATCAATGGCTTGTCCTCATGTGGCAGGTGTAGCGGCTTATGTCAAGTCTTTTCACCCCGACTGGTCTCCCTCGGCAATCAAATCCGCTATAATGACCACCGCTACCCCCATGAACCTTAAGAAGAACCCCGAGCAAGAATTTGCATATGGATCAGGCCAAATTAACCCGACCAAAGCAAGTGACCCCGGACTTGTATATGAAGTAGAAACAGAAGATTACCTCAAAATGTTATGTGCAGAGGGTTTTGATTCAACAACGCTCACAACAACCTCAGGACAGAACGTCACATGTTCGGAAAGAACAGAAGTCAAGGATCTGAATTACCCAACAATGACTACGTTTGTCTCTTCTCTTGATCCATTCAATGTCACGTTTAAAAGAACTGTCACTAATGTTGGATTCCCAAACTCTACGTACAAGGCAAGTGTTGTTCCTCTCCAACCGGAGCTTCAGATTAGCATAGAACCAGAAATACTGAGATTCGGTTTCCTGGAGGAGAAGAAATCTTTTGTTGTGACCATCTCTGGTAAAGAACTGAAGGATGGAAGTTTTGTAAGTTCGTCTGTGGTTTGGTCTGATGGGAGTCACAGTGTCAGAAGTCCAATCGTTGCTTACTCAATCCAGCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009719 GO:0009725 GO:0009753 GO:0010033 GO:0010035 GO:0010038 GO:0016787 GO:0017171 GO:0019538 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044464 GO:0046686 GO:0050896 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

693

Amino Acids

74.37

Weight (kDa)

5.72

Isoelectric Point (pI)

41.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	12 - 72	2.1e-10	Peptidase inhibitor I9
Peptidase_S8	PF00082	95 - 536	3.3e-44	Subtilase family
fn3_6	PF17766	589 - 687	7.1e-25	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000257)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46840 AT3G46850 AT5G58820 AT5G58830 AT5G58840 AT5G58840 AT5G58840 AT5G59090 AT5G59090 AT5G59090 AT5G59100 AT5G59120 AT5G59130 AT5G59130 AT5G59130 AT5G59130 AT5G59190
fragaria_vesca	FvH4_3g37170 FvH4_7g02830 FvH4_7g02840
malus_domestica	MD02G1288900.v1.1 MD02G1289100.v1.1 MD02G1289300.v1.1 MD02G1289400.v1.1 MD02G1289500.v1.1 MD03G1083800.v1.1 MD03G1084000.v1.1 MD07G1037500.v1.1 MD07G1037600.v1.1 MD07G1037700.v1.1 MD07G1039300.v1.1 MD11G1091900.v1.1 MD11G1092000.v1.1
prunus_persica	Prupe.2G032800_v2.0.a1 Prupe.2G033000_v2.0.a1 Prupe.2G033100_v2.0.a1 Prupe.2G035100_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067700_v2.0.a1 Prupe.6G067800_v2.0.a1
pyrus_communis	pycom02g24440 pycom02g24470 pycom02g24480 pycom02g24500 pycom02g24510 pycom03g06650 pycom07g02730 pycom11g07710 pycom11g07720
rosa_chinensis	RchiOBHm_Chr1g0323281 RchiOBHm_Chr1g0323291 RchiOBHm_Chr1g0323311 RchiOBHm_Chr1g0323341 RchiOBHm_Chr1g0323351 RchiOBHm_Chr1g0323371 RchiOBHm_Chr1g0323431 RchiOBHm_Chr1g0323461 RchiOBHm_Chr1g0324031 RchiOBHm_Chr5g0066891 RchiOBHm_Chr5g0066901
rosa_laevigata	RLG00000030004 RLG00000030235 RLG00000030328 RLG00000030329 RLG00000030334 RLG00000030336 RLG00000030337 RLG00000030338 RLG00000030339 RLG00000030340 RLG00000035885 RLG00000035886 RLG00000035888 RLG00000035890
rosa_multiflora	Rmu_co8481685.1_g000001 Rmu_co8485349.1_g000001 Rmu_sc0000605.1_g000061 Rmu_sc0000804.1_g000004 Rmu_sc0000804.1_g000008 Rmu_sc0002263.1_g000074 Rmu_sc0002263.1_g000076 Rmu_sc0002263.1_g000077 Rmu_sc0003418.1_g000005 Rmu_sc0003418.1_g000007 Rmu_sc0003418.1_g000008 Rmu_sc0008378.1_g000013 Rmu_sc0010151.1_g000012
rosa_roxburghii	Rroxscaffold_1G00014220 Rroxscaffold_1G00014230 Rroxscaffold_4G00325970 Rroxscaffold_4G00326160 Rroxscaffold_4G00326570 Rroxscaffold_4G00326580 Rroxscaffold_4G00326650 Rroxscaffold_4G00326670 Rroxscaffold_4G00326680 Rroxscaffold_4G00326700
rosa_rugosa	Rorug01G0037300 Rorug01G0037400 Rorug01G0037600 Rorug01G0037700 Rorug01G0037800 Rorug01G0037800 Rorug01G0042100 Rorug01G0065000 Rorug05G0379300 Rorug05G0379400
rosa_samantha	Rh1AG054700 Rh1AG054900 Rh1AG055000 Rh1AG055200 Rh1AG055300 Rh1BG047500 Rh1CG055800 Rh1CG056000 Rh1CG061400 Rh1DG059900 Rh1DG060200 Rh5AG439100 Rh5AG439200 Rh5BG455900 Rh5CG478000 Rh5CG478300
rosa_wichuraiana	Rw1G004750 Rw1G004760 Rw1G004770 Rw1G004790 Rw1G005080 Rw1G006510 Rw5G041060 Rw5G041070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	108
AarI	CACCTGC	1 cut(s)	1466
Acc36I	ACCTGC	2 cut(s)	761, 1466
AccI	GTMKAC	1 cut(s)	52
AccII	CGCG	1 cut(s)	1299
AciI	CCGC	9 cut(s)	359, 515, 588, 610, 849, 1299, 1484, 1536, 1551
AclWI	GGATC	3 cut(s)	1609, 1773, 1802
AcoI	YGGCCR	2 cut(s)	320, 961
AcsI	RAATTY	3 cut(s)	401, 446, 1589
AcuI	CTGAAG	2 cut(s)	1886, 2009
AfaI	GTAC	4 cut(s)	26, 553, 853, 1868
AfiI	CCNNNNNNNGG	1 cut(s)	800
AflII	CTTAAG	1 cut(s)	1568
AflIII	ACRYGT	2 cut(s)	969, 1739
AhdI	GACNNNNNGTC	1 cut(s)	1733
AjnI	CCWGG	2 cut(s)	1348, 1941
AjuI	GAANNNNNNNTTGG	2 cut(s)	1884, 1916
AloI	GAACNNNNNNTCC	4 cut(s)	848, 880, 1098, 1130
Alw21I	GWGCWC	1 cut(s)	1348
Alw26I	GTCTC	4 cut(s)	256, 706, 1521, 1801
Alw44I	GTGCAC	1 cut(s)	1344
AlwI	GGATC	3 cut(s)	1609, 1773, 1802
AlwNI	CAGNNNCTG	1 cut(s)	163
Ama87I	CYCGRG	1 cut(s)	1580
AoxI	GGCC	7 cut(s)	320, 394, 475, 791, 961, 1301, 1606
ApaLI	GTGCAC	1 cut(s)	1344
ApeKI	GCWGC	8 cut(s)	80, 131, 503, 524, 612, 635, 842, 1367
ApoI	RAATTY	3 cut(s)	401, 446, 1589
ArsI	GACNNNNNNTTYG	4 cut(s)	335, 367, 1127, 1159
Asp700I	GAANNNNTTC	1 cut(s)	982
AspA2I	CCTAGG	1 cut(s)	1069
AspLEI	GCGC	1 cut(s)	1142
AspS9I	GGNCC	4 cut(s)	356, 791, 856, 1301
AsuC2I	CCSGG	1 cut(s)	1638
AsuHPI	GGTGA	4 cut(s)	21, 32, 1048, 1496
AsuNHI	GCTAGC	1 cut(s)	527
AvaI	CYCGRG	1 cut(s)	1580
AvaII	GGWCC	2 cut(s)	356, 856
AvrII	CCTAGG	1 cut(s)	1069
AxyI	CCTNAGG	2 cut(s)	1410, 1723
BaeGI	GKGCMC	1 cut(s)	1348
BauI	CACGAG	1 cut(s)	558
Bbv12I	GWGCWC	1 cut(s)	1348
BbvI	GCAGC	8 cut(s)	67, 118, 490, 511, 599, 622, 854, 1354
BccI	CCATC	6 cut(s)	51, 653, 1291, 1979, 1988, 2024
BceAI	ACGGC	3 cut(s)	516, 783, 976
BciT130I	CCWGG	2 cut(s)	1350, 1943
BclI	TGATCA	1 cut(s)	796
BcnI	CCSGG	1 cut(s)	1638
BcoDI	GTCTC	4 cut(s)	256, 706, 1521, 1801
BfaI	CTAG	3 cut(s)	432, 528, 1070
BfmI	CTRYAG	2 cut(s)	723, 1215
BfrI	CTTAAG	1 cut(s)	1568
BfuAI	ACCTGC	2 cut(s)	761, 1466
BlnI	CCTAGG	1 cut(s)	1069
BmcAI	AGTACT	1 cut(s)	26
Bme1390I	CCNGG	3 cut(s)	1350, 1638, 1943
Bme18I	GGWCC	2 cut(s)	356, 856
BmeRI	GACNNNNNGTC	1 cut(s)	1733
BmeT110I	CYCGRG	1 cut(s)	1580
BmgT120I	GGNCC	4 cut(s)	356, 791, 856, 1301
BmiI	GGNNCC	4 cut(s)	382, 484, 1099, 1152
BmrFI	CCNGG	3 cut(s)	1350, 1638, 1943
BmsI	GCATC	2 cut(s)	92, 637
BmtI	GCTAGC	1 cut(s)	531
BpmI	CTGGAG	2 cut(s)	1116, 1964
BpuEI	CTTGAG	2 cut(s)	129, 531
BpuMI	CCSGG	1 cut(s)	1638
BsaAI	YACGTR	1 cut(s)	1866
BsaBI	GATNNNNATC	1 cut(s)	683
BsaI	GGTCTC	1 cut(s)	1521
BsaJI	CCNNGG	7 cut(s)	478, 573, 824, 1069, 1248, 1521, 1636
BsaWI	WCCGGW	2 cut(s)	1378, 1894
BsaXI	ACNNNNNCTCC	4 cut(s)	1098, 1128, 2026, 2056
Bsc4I	CCNNNNNNNGG	1 cut(s)	800
Bse118I	RCCGGY	2 cut(s)	858, 998
Bse1I	ACTGG	1 cut(s)	1517
Bse21I	CCTNAGG	2 cut(s)	1410, 1723
Bse3DI	GCAATG	3 cut(s)	651, 753, 1124
Bse8I	GATNNNNATC	1 cut(s)	683
BseBI	CCWGG	2 cut(s)	1350, 1943
BseDI	CCNNGG	7 cut(s)	478, 573, 824, 1069, 1248, 1521, 1636
BseGI	GGATG	2 cut(s)	834, 1999
BseJI	GATNNNNATC	1 cut(s)	683
BseLI	CCNNNNNNNGG	1 cut(s)	800
BseMI	GCAATG	3 cut(s)	651, 753, 1124
BseMII	CTCAG	8 cut(s)	6, 61, 321, 471, 702, 1401, 1737, 1919
BseNI	ACTGG	1 cut(s)	1517
BseRI	GAGGAG	2 cut(s)	1265, 1961
BseSI	GKGCMC	1 cut(s)	1348
BseXI	GCAGC	8 cut(s)	67, 118, 490, 511, 599, 622, 854, 1354
BseYI	CCCAGC	1 cut(s)	779
BsgI	GTGCAG	1 cut(s)	1707
Bsh1236I	CGCG	1 cut(s)	1299
Bsh1285I	CGRYCG	1 cut(s)	954
BshFI	GGCC	7 cut(s)	322, 396, 477, 793, 963, 1303, 1608
BsiEI	CGRYCG	1 cut(s)	954
BsiHKAI	GWGCWC	1 cut(s)	1348
BsiHKCI	CYCGRG	1 cut(s)	1580
BsiSI	CCGG	6 cut(s)	323, 859, 999, 1379, 1638, 1895
BslFI	GGGAC	2 cut(s)	248, 952
BslI	CCNNNNNNNGG	1 cut(s)	800
BsmAI	GTCTC	4 cut(s)	256, 706, 1521, 1801
BsmBI	CGTCTC	2 cut(s)	256, 706
BsmFI	GGGAC	2 cut(s)	248, 952
BsnI	GGCC	7 cut(s)	322, 396, 477, 793, 963, 1303, 1608
Bso31I	GGTCTC	1 cut(s)	1521
BsoBI	CYCGRG	1 cut(s)	1580
Bsp1286I	GDGCHC	1 cut(s)	1348
Bsp143I	GATC	8 cut(s)	227, 678, 796, 951, 1047, 1601, 1765, 1807
Bsp19I	CCATGG	2 cut(s)	478, 824
BspACI	CCGC	9 cut(s)	359, 515, 588, 610, 849, 1299, 1484, 1536, 1551
BspANI	GGCC	7 cut(s)	322, 396, 477, 793, 963, 1303, 1608
BspCNI	CTCAG	8 cut(s)	7, 60, 322, 470, 701, 1402, 1736, 1920
BspFNI	CGCG	1 cut(s)	1299
BspHI	TCATGA	1 cut(s)	208
BspLI	GGNNCC	4 cut(s)	382, 484, 1099, 1152
BspMAI	CTGCAG	1 cut(s)	1219
BspMI	ACCTGC	2 cut(s)	761, 1466
BspOI	GCTAGC	1 cut(s)	531
BspPI	GGATC	3 cut(s)	1609, 1773, 1802
BspTI	CTTAAG	1 cut(s)	1568
BspTNI	GGTCTC	1 cut(s)	1521
BsrDI	GCAATG	3 cut(s)	651, 753, 1124
BsrFI	RCCGGY	2 cut(s)	858, 998
BsrI	ACTGG	1 cut(s)	1517
BssAI	RCCGGY	2 cut(s)	858, 998
BssECI	CCNNGG	7 cut(s)	478, 573, 824, 1069, 1248, 1521, 1636
BssMI	GATC	8 cut(s)	227, 678, 796, 951, 1047, 1601, 1765, 1807
BssNAI	GTATAC	1 cut(s)	53
BssSI	CACGAG	1 cut(s)	558
BssT1I	CCWWGG	3 cut(s)	478, 824, 1069
Bst1107I	GTATAC	1 cut(s)	53
Bst2BI	CACGAG	1 cut(s)	558
Bst2UI	CCWGG	2 cut(s)	1350, 1943
Bst4CI	ACNGT	5 cut(s)	311, 539, 838, 1837, 2042
Bst6I	CTCTTC	2 cut(s)	1171, 1804
BstAFI	CTTAAG	1 cut(s)	1568
BstBAI	YACGTR	1 cut(s)	1866
BstC8I	GCNNGC	4 cut(s)	409, 529, 847, 1301
BstDSI	CCRYGG	2 cut(s)	478, 824
BstENI	CCTNNNNNAGG	1 cut(s)	798
BstF5I	GGATG	2 cut(s)	834, 1999
BstFNI	CGCG	1 cut(s)	1299
BstHHI	GCGC	1 cut(s)	1142
BstKTI	GATC	8 cut(s)	230, 681, 799, 954, 1050, 1604, 1768, 1810
BstMAI	GTCTC	4 cut(s)	256, 706, 1521, 1801
BstMBI	GATC	8 cut(s)	227, 678, 796, 951, 1047, 1601, 1765, 1807
BstMCI	CGRYCG	1 cut(s)	954
BstNI	CCWGG	2 cut(s)	1350, 1943
BstNSI	RCATGY	1 cut(s)	1743
BstSCI	CCNGG	3 cut(s)	1348, 1636, 1941
BstSFI	CTRYAG	2 cut(s)	723, 1215
BstSLI	GKGCMC	1 cut(s)	1348
BstSNI	TACGTA	1 cut(s)	1866
BstUI	CGCG	1 cut(s)	1299
BstV1I	GCAGC	8 cut(s)	67, 118, 490, 511, 599, 622, 854, 1354
BstX2I	RGATCY	1 cut(s)	1765
BstXI	CCANNNNNNTGG	1 cut(s)	372
BstYI	RGATCY	1 cut(s)	1765
BstZ17I	GTATAC	1 cut(s)	53
Bsu36I	CCTNAGG	2 cut(s)	1410, 1723
BsuRI	GGCC	7 cut(s)	322, 396, 477, 793, 963, 1303, 1608
BtgI	CCRYGG	2 cut(s)	478, 824
BtgZI	GCGATG	1 cut(s)	69
BtsCI	GGATG	2 cut(s)	834, 1999
BtsI	GCAGTG	1 cut(s)	489
BtsIMutI	CAGTG	4 cut(s)	195, 316, 489, 2047
BveI	ACCTGC	2 cut(s)	761, 1466
Cac8I	GCNNGC	4 cut(s)	409, 529, 847, 1301
CaiI	CAGNNNCTG	1 cut(s)	163
CciI	TCATGA	1 cut(s)	208
CfoI	GCGC	1 cut(s)	1142
Cfr10I	RCCGGY	2 cut(s)	858, 998
Cfr13I	GGNCC	4 cut(s)	356, 791, 856, 1301
CpoI	CGGWCCG	1 cut(s)	856
CseI	GACGC	1 cut(s)	483
Csp6I	GTAC	4 cut(s)	25, 552, 852, 1867
CspI	CGGWCCG	1 cut(s)	856
CviAII	CATG	7 cut(s)	209, 231, 479, 825, 1469, 1561, 1740
CviQI	GTAC	4 cut(s)	25, 552, 852, 1867
DpnI	GATC	8 cut(s)	229, 680, 798, 953, 1049, 1603, 1767, 1809
DpnII	GATC	8 cut(s)	227, 678, 796, 951, 1047, 1601, 1765, 1807
DraI	TTTAAA	1 cut(s)	1828
DriI	GACNNNNNGTC	1 cut(s)	1733
EaeI	YGGCCR	2 cut(s)	320, 961
Eam1104I	CTCTTC	2 cut(s)	1171, 1804
Eam1105I	GACNNNNNGTC	1 cut(s)	1733
EarI	CTCTTC	2 cut(s)	1171, 1804
EciI	GGCGGA	1 cut(s)	348
Eco105I	TACGTA	1 cut(s)	1866
Eco130I	CCWWGG	3 cut(s)	478, 824, 1069
Eco31I	GGTCTC	1 cut(s)	1521
Eco47I	GGWCC	2 cut(s)	356, 856
Eco57I	CTGAAG	2 cut(s)	1886, 2009
Eco81I	CCTNAGG	2 cut(s)	1410, 1723
Eco88I	CYCGRG	1 cut(s)	1580
EcoNI	CCTNNNNNAGG	1 cut(s)	798
EcoRII	CCWGG	2 cut(s)	1348, 1941
EcoT14I	CCWWGG	3 cut(s)	478, 824, 1069
ErhI	CCWWGG	3 cut(s)	478, 824, 1069
Esp3I	CGTCTC	2 cut(s)	256, 706
FaeI	CATG	7 cut(s)	212, 234, 482, 828, 1472, 1564, 1743
FaqI	GGGAC	2 cut(s)	248, 952
FatI	CATG	7 cut(s)	208, 230, 478, 824, 1468, 1560, 1739
FauI	CCCGC	1 cut(s)	1292
FauNDI	CATATG	2 cut(s)	1276, 1597
FbaI	TGATCA	1 cut(s)	796
FblI	GTMKAC	1 cut(s)	52
FokI	GGATG	2 cut(s)	841, 2006
FspBI	CTAG	3 cut(s)	432, 528, 1070
GlaI	GCGC	1 cut(s)	1141
GsaI	CCCAGC	1 cut(s)	783
GsuI	CTGGAG	2 cut(s)	1116, 1964
HaeIII	GGCC	7 cut(s)	322, 396, 477, 793, 963, 1303, 1608
HapII	CCGG	6 cut(s)	323, 859, 999, 1379, 1638, 1895
HgaI	GACGC	1 cut(s)	483
HhaI	GCGC	1 cut(s)	1142
Hin1II	CATG	7 cut(s)	212, 234, 482, 828, 1472, 1564, 1743
Hin6I	GCGC	1 cut(s)	1140
HinP1I	GCGC	1 cut(s)	1140
HincII	GTYRAC	1 cut(s)	498
HindII	GTYRAC	1 cut(s)	498
HindIII	AAGCTT	1 cut(s)	1083
HpaII	CCGG	6 cut(s)	323, 859, 999, 1379, 1638, 1895
HphI	GGTGA	4 cut(s)	21, 32, 1048, 1496
Hpy166II	GTNNAC	4 cut(s)	53, 498, 958, 1346
Hpy188III	TCNNGA	9 cut(s)	14, 209, 676, 949, 975, 1133, 1327, 1725, 1805
Hpy8I	GTNNAC	4 cut(s)	53, 498, 958, 1346
Hpy99I	CGWCG	1 cut(s)	347
HpyAV	CCTTC	4 cut(s)	341, 467, 1401, 1984
HpyCH4III	ACNGT	5 cut(s)	311, 539, 838, 1837, 2042
HpyCH4IV	ACGT	7 cut(s)	699, 969, 1338, 1734, 1790, 1823, 1865
HpySE526I	ACGT	7 cut(s)	699, 969, 1338, 1734, 1790, 1823, 1865
Hsp92II	CATG	7 cut(s)	212, 234, 482, 828, 1472, 1564, 1743
HspAI	GCGC	1 cut(s)	1140
Ksp22I	TGATCA	1 cut(s)	796
Kzo9I	GATC	8 cut(s)	227, 678, 796, 951, 1047, 1601, 1765, 1807
LmnI	GCTCC	5 cut(s)	114, 428, 1097, 1276, 1897
Lsp1109I	GCAGC	8 cut(s)	67, 118, 490, 511, 599, 622, 854, 1354
LweI	GCATC	2 cut(s)	92, 637
MaeI	CTAG	3 cut(s)	432, 528, 1070
MaeII	ACGT	7 cut(s)	699, 969, 1338, 1734, 1790, 1823, 1865
MaeIII	GTNAC	8 cut(s)	887, 1058, 1631, 1735, 1819, 1837, 1966, 2036
MalI	GATC	8 cut(s)	229, 680, 798, 953, 1049, 1603, 1767, 1809
MboI	GATC	8 cut(s)	227, 678, 796, 951, 1047, 1601, 1765, 1807
MboII	GAAGA	7 cut(s)	1057, 1158, 1284, 1585, 1676, 1791, 1963
MflI	RGATCY	1 cut(s)	1765
MhlI	GDGCHC	1 cut(s)	1348
MluCI	AATT	7 cut(s)	401, 446, 706, 979, 1589, 1611, 1771
MlyI	GAGTC	6 cut(s)	163, 214, 449, 885, 1116, 2044
MmeI	TCCRAC	4 cut(s)	223, 277, 1828, 1915
MroXI	GAANNNNTTC	1 cut(s)	982
MseI	TTAA	8 cut(s)	21, 713, 902, 918, 1569, 1614, 1827, 2080
MslI	CAYNNNNRTG	1 cut(s)	1454
MspA1I	CMGCKG	3 cut(s)	612, 779, 849
MspCI	CTTAAG	1 cut(s)	1568
MspI	CCGG	6 cut(s)	323, 859, 999, 1379, 1638, 1895
MspR9I	CCNGG	3 cut(s)	1350, 1638, 1943
MvaI	CCWGG	2 cut(s)	1350, 1943
MvnI	CGCG	1 cut(s)	1299
NciI	CCSGG	1 cut(s)	1638
NcoI	CCATGG	2 cut(s)	478, 824
NdeI	CATATG	2 cut(s)	1276, 1597
NdeII	GATC	8 cut(s)	227, 678, 796, 951, 1047, 1601, 1765, 1807
NheI	GCTAGC	1 cut(s)	527
NlaIII	CATG	7 cut(s)	212, 234, 482, 828, 1472, 1564, 1743
NlaIV	GGNNCC	4 cut(s)	382, 484, 1099, 1152
NmeAIII	GCCGAG	3 cut(s)	175, 554, 1502
NmuCI	GTSAC	7 cut(s)	1058, 1631, 1735, 1819, 1837, 1966, 2036
NspI	RCATGY	1 cut(s)	1743
PagI	TCATGA	1 cut(s)	208
PaqCI	CACCTGC	1 cut(s)	1466
PciI	ACATGT	1 cut(s)	1739
PcsI	WCGNNNNNNNCGW	2 cut(s)	249, 966
PdmI	GAANNNNTTC	1 cut(s)	982
PfeI	GAWTC	9 cut(s)	126, 315, 326, 759, 1211, 1360, 1700, 1851, 1932
PflFI	GACNNNGTC	2 cut(s)	239, 875
PfoI	TCCNGGA	1 cut(s)	1941
Ple19I	CGATCG	1 cut(s)	954
PleI	GAGTC	6 cut(s)	162, 213, 449, 884, 1115, 2043
PpsI	GAGTC	6 cut(s)	162, 213, 449, 884, 1115, 2043
Ppu21I	YACGTR	1 cut(s)	1866
PscI	ACATGT	1 cut(s)	1739
PsiI	TTATAA	1 cut(s)	108
Psp6I	CCWGG	2 cut(s)	1348, 1941
PspFI	CCCAGC	1 cut(s)	779
PspGI	CCWGG	2 cut(s)	1348, 1941
PspN4I	GGNNCC	4 cut(s)	382, 484, 1099, 1152
PspPI	GGNCC	4 cut(s)	356, 791, 856, 1301
PsrI	GAACNNNNNNTAC	2 cut(s)	1908, 1940
PstI	CTGCAG	1 cut(s)	1219
PstNI	CAGNNNCTG	1 cut(s)	163
PsuI	RGATCY	1 cut(s)	1765
PsyI	GACNNNGTC	2 cut(s)	239, 875
PvuI	CGATCG	1 cut(s)	954
PvuII	CAGCTG	1 cut(s)	779
RsaI	GTAC	4 cut(s)	26, 553, 853, 1868
RsaNI	GTAC	4 cut(s)	25, 552, 852, 1867
RseI	CAYNNNNRTG	1 cut(s)	1454
Rsr2I	CGGWCCG	1 cut(s)	856
RsrII	CGGWCCG	1 cut(s)	856
SaqAI	TTAA	8 cut(s)	21, 713, 902, 918, 1569, 1614, 1827, 2080
Sau3AI	GATC	8 cut(s)	227, 678, 796, 951, 1047, 1601, 1765, 1807
Sau96I	GGNCC	4 cut(s)	356, 791, 856, 1301
ScaI	AGTACT	1 cut(s)	26
SchI	GAGTC	6 cut(s)	163, 214, 449, 885, 1116, 2044
ScrFI	CCNGG	3 cut(s)	1350, 1638, 1943
SduI	GDGCHC	1 cut(s)	1348
SfaNI	GCATC	2 cut(s)	92, 637
SfcI	CTRYAG	2 cut(s)	723, 1215
SinI	GGWCC	2 cut(s)	356, 856
SmiMI	CAYNNNNRTG	1 cut(s)	1454
SmlI	CTYRAG	3 cut(s)	144, 546, 1568
SmoI	CTYRAG	3 cut(s)	144, 546, 1568
SnaBI	TACGTA	1 cut(s)	1866
Sse9I	AATT	7 cut(s)	401, 446, 706, 979, 1589, 1611, 1771
SsiI	CCGC	9 cut(s)	359, 515, 588, 610, 849, 1299, 1484, 1536, 1551
SspMI	CTAG	3 cut(s)	432, 528, 1070
StyD4I	CCNGG	3 cut(s)	1348, 1636, 1941
StyI	CCWWGG	3 cut(s)	478, 824, 1069
TaaI	ACNGT	5 cut(s)	311, 539, 838, 1837, 2042
TaiI	ACGT	7 cut(s)	702, 972, 1341, 1737, 1793, 1826, 1868
TaqI	TCGA	2 cut(s)	677, 974
TasI	AATT	7 cut(s)	401, 446, 706, 979, 1589, 1611, 1771
TatI	WGTACW	1 cut(s)	24
TauI	GCSGC	2 cut(s)	590, 1487
TfiI	GAWTC	9 cut(s)	126, 315, 326, 759, 1211, 1360, 1700, 1851, 1932
Tru1I	TTAA	8 cut(s)	21, 713, 902, 918, 1569, 1614, 1827, 2080
Tru9I	TTAA	8 cut(s)	21, 713, 902, 918, 1569, 1614, 1827, 2080
TscAI	CASTG	4 cut(s)	195, 316, 496, 2047
TseFI	GTSAC	7 cut(s)	1058, 1631, 1735, 1819, 1837, 1966, 2036
TseI	GCWGC	8 cut(s)	80, 131, 503, 524, 612, 635, 842, 1367
Tsp45I	GTSAC	7 cut(s)	1058, 1631, 1735, 1819, 1837, 1966, 2036
TspDTI	ATGAA	5 cut(s)	188, 225, 856, 1577, 1665
TspGWI	ACGGA	2 cut(s)	869, 906
TspRI	CASTG	4 cut(s)	195, 316, 496, 2047
Tth111I	GACNNNGTC	2 cut(s)	239, 875
Vha464I	CTTAAG	1 cut(s)	1568
VneI	GTGCAC	1 cut(s)	1344
VpaK11BI	GGWCC	2 cut(s)	356, 856
XagI	CCTNNNNNAGG	1 cut(s)	798
XapI	RAATTY	3 cut(s)	401, 446, 1589
XceI	RCATGY	1 cut(s)	1743
XcmI	CCANNNNNNNNNTGG	1 cut(s)	65
XmaJI	CCTAGG	1 cut(s)	1069
XmiI	GTMKAC	1 cut(s)	52
XmnI	GAANNNNTTC	1 cut(s)	982
XspI	CTAG	3 cut(s)	432, 528, 1070
ZrmI	AGTACT	1 cut(s)	26

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.