Rw1G004790

Subtilisin-like serine endopeptidase family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000257
Physical Location & Seq
Reverse (-)
9151088 .. 9171191
20104 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G004790.1

Sequence Viewer

Length: 2172 bp
ATGTCGTTTAAGTCCCCTTCAATCAGTTACATTTTAGAGGACCTAGGGGGCAATGTCCTTATAGTATACATGGGCTCACTTCCCGCTAACCATTCGTATTCACCATTGTCTCACCACCTTAGTATGTTAGAAAGAGTTGTCAAGAATGTTGTCGACAGCAACTCTGCAGAAAATTTCTTGACAAGAAGTTACAAAAGGAGTTTCAGTGGATTTGCTGCAAAGCTCACTGACCGGGAAAGGGAAAGGCTTGCTAACATGAAGGAAGTAGTCTCTGTATTTCCAAGCAGAATTCTCCATCCTCAGACAACAAGATCTTGGGACTTTATCGGTTTCCATGAGAAAATAAAACGGAATGTCAGTGTTGAGAGTGATACCATTATTGGTGTCATTGACACTGGAATTTGGCCTGAATCGGAGAGCTTTAAAGATGATGGTTTTGGTCCTCCTCCCAAGAAGTGGAAAGGTGCTTGTGAGGGCGGCCGAAATTTCACTTGCAATAAGAAGCTAATTGGAGCCCGAGTTTACAGTTCATCTTCAGAGTCTGCAAGGGATGAACAAGGCCATGGAACCCACACAGCCTCAACTGCTGCAGGGAACACTGTAAAGGATGTGAGCTTTTATGGACTAGCAGGAGGTACTGCAAGAGGAGGGGTTCCCTCAGCGAGAATTTCTGTGTATAAAGTATGTGGTCAGGATGACTGCCCTAGTGATGCTATATTGGCTGCTTTTGATGATGCTATTGCGGATGGAGCTGACATCATTACAGTTTCATTAGGAAGCGAGGAAGCATCTTTATTACAGTATGATCCTATTGCTATCGGTGCTTTCCATGCAATGGAAAAGGGGGTACTTACAACAAATTCTGCAGGCAACAGTGGTCCTGATGATTCAACTGTTTCAAGTGTAGCACCATGGATATTTGCAGTTGCAGCAAGTAGTACTGATCGTAGGATCATTGACAAGGTTGTTCTCAAAAATGGGACGACCATGGTTGGGACTTCAGTGAACACTTTCAAATTAAATGGGACAAGTTTTCCATTGATCTATGGAAAAGATGCTTCAAGTAATTGCTCCGAGATCGAAGCTGGGAGCTGTTCAGACGGCTGCTTAGATAGTGGTTTAGTTAAGGGAAAAGTTGTGTTATGTGACGTGACTAGCGGAGTTGATGAGGCCTATGTTTCTGGAGCAGTAGGCTTAATTTTGAGAGCTGATTATGATGATGTTTCTGAAATTGTACCCTTTCCTACAACAGCTCTTGCCAACAAAGAGCATAGTCTGATAAAGTTGTACACGAACTCCACCAAAGATCCTCGAGTAAAAATACAAAGAAGTGAAGAAGCAAGGGATACTGCCGCACCTGTTGTTGCTTCATTCTCTTCACGTGGACCAAATTCAATTCTACCAGAAATTATCAAGCCAGATATAAGTGCCCCAGGGGTTACTATTTTGGCTGCCTTTTCACCTATTGCTTCAGTTACAGAGAGTCTTCAAGACACAAGGCGTGTCAAATATAGTATACTATCTGGAACCTCCATGTCTTGTCCCCATGCAGCTGGTGCAGCTGCTTATGTTAAAGCATTCCATCCTGATTGGTCTCCAGCAGCCATCAAATCATCTCTCATGACCACTTCTCCTATGAATGTTACTGACAATAGCAGTGCCGCTGGTGAATTTGCTTATGGATCTGGACATATCAATCCTGTCAAAGCTATAGACCCAGGGCTTGTGTATGAAGCTTCTAAGGAAGACTACATAAAGTTGCTATGCTCGGTCTTGGATCAGGCCGATGTTAGACTTATATCAGGAGATAACAGCACTTGCTCTACAGGCTCTGACAAAGGATCTTTACAGGATCACAATTACCCTTCACTAGCAGCCGTTGTCACACCAAACAAATCTTTTTCGTTGAAATTTAACAGAAAAGTTAAGAATGTTGGCCTTGCAAACTCCACTTACAAGGCCACAATATTCGCCAACTCTACTCAAGTTGACGTCAAAGTGGTGCCTCAAGTTCTTTCCTTCAAGTCCTTGAATGAGGAGAAGGCTTTTGATGTGACAGTTGCCGGAAAAGGTTTGCCAGATGAAGTACAATCACATGTGTCTGCATCGCTGGTGTGGTCTGATGGAATTCATAGCGTTAGAAGTCCAATTCTTATCCACAACAAACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Inhibitor_I9 PA Peptidase_S8

Protein Analysis

723

Amino Acids

76.9

Weight (kDa)

6.09

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 21 - 99 3.1e-14 Peptidase inhibitor I9
Peptidase_S8 PF00082 123 - 563 5e-45 Subtilase family
fn3_6 PF17766 618 - 719 8.4e-24 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000257)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46840 AT3G46850 AT5G58820 AT5G58830 AT5G58840 AT5G58840 AT5G58840 AT5G59090 AT5G59090 AT5G59090 AT5G59100 AT5G59120 AT5G59130 AT5G59130 AT5G59130 AT5G59130 AT5G59190
fragaria_vesca FvH4_3g37170 FvH4_7g02830 FvH4_7g02840
malus_domestica MD02G1288900.v1.1 MD02G1289100.v1.1 MD02G1289300.v1.1 MD02G1289400.v1.1 MD02G1289500.v1.1 MD03G1083800.v1.1 MD03G1084000.v1.1 MD07G1037500.v1.1 MD07G1037600.v1.1 MD07G1037700.v1.1 MD07G1039300.v1.1 MD11G1091900.v1.1 MD11G1092000.v1.1
prunus_persica Prupe.2G032800_v2.0.a1 Prupe.2G033000_v2.0.a1 Prupe.2G033100_v2.0.a1 Prupe.2G035100_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067600_v2.0.a1 Prupe.6G067700_v2.0.a1 Prupe.6G067800_v2.0.a1
pyrus_communis pycom02g24440 pycom02g24470 pycom02g24480 pycom02g24500 pycom02g24510 pycom03g06650 pycom07g02730 pycom11g07710 pycom11g07720
rosa_chinensis RchiOBHm_Chr1g0323281 RchiOBHm_Chr1g0323291 RchiOBHm_Chr1g0323311 RchiOBHm_Chr1g0323341 RchiOBHm_Chr1g0323351 RchiOBHm_Chr1g0323371 RchiOBHm_Chr1g0323431 RchiOBHm_Chr1g0323461 RchiOBHm_Chr1g0324031 RchiOBHm_Chr5g0066891 RchiOBHm_Chr5g0066901
rosa_laevigata RLG00000030004 RLG00000030235 RLG00000030328 RLG00000030329 RLG00000030334 RLG00000030336 RLG00000030337 RLG00000030338 RLG00000030339 RLG00000030340 RLG00000035885 RLG00000035886 RLG00000035888 RLG00000035890
rosa_multiflora Rmu_co8481685.1_g000001 Rmu_co8485349.1_g000001 Rmu_sc0000605.1_g000061 Rmu_sc0000804.1_g000004 Rmu_sc0000804.1_g000008 Rmu_sc0002263.1_g000074 Rmu_sc0002263.1_g000076 Rmu_sc0002263.1_g000077 Rmu_sc0003418.1_g000005 Rmu_sc0003418.1_g000007 Rmu_sc0003418.1_g000008 Rmu_sc0008378.1_g000013 Rmu_sc0010151.1_g000012
rosa_roxburghii Rroxscaffold_1G00014220 Rroxscaffold_1G00014230 Rroxscaffold_4G00325970 Rroxscaffold_4G00326160 Rroxscaffold_4G00326570 Rroxscaffold_4G00326580 Rroxscaffold_4G00326650 Rroxscaffold_4G00326670 Rroxscaffold_4G00326680 Rroxscaffold_4G00326700
rosa_rugosa Rorug01G0037300 Rorug01G0037400 Rorug01G0037600 Rorug01G0037700 Rorug01G0037800 Rorug01G0037800 Rorug01G0042100 Rorug01G0065000 Rorug05G0379300 Rorug05G0379400
rosa_samantha Rh1AG054700 Rh1AG054900 Rh1AG055000 Rh1AG055200 Rh1AG055300 Rh1BG047500 Rh1CG055800 Rh1CG056000 Rh1CG061400 Rh1DG059900 Rh1DG060200 Rh5AG439100 Rh5AG439200 Rh5BG455900 Rh5CG478000 Rh5CG478300
rosa_wichuraiana Rw1G004750 Rw1G004760 Rw1G004770 Rw1G004790 Rw1G005080 Rw1G006510 Rw5G041060 Rw5G041070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1995
AccB1I GGYRCC 1 cut(s) 2002
AccB7I CCANNNNNTGG 2 cut(s) 456, 835
AccI GTMKAC 3 cut(s) 66, 153, 1516
AciI CCGC 6 cut(s) 84, 477, 743, 1158, 1353, 1662
AclWI GGATC 7 cut(s) 800, 959, 1301, 1690, 1785, 1849, 1860
AcoI YGGCCR 1 cut(s) 478
AcuI CTGAAG 3 cut(s) 519, 984, 1455
AcvI CACGTG 1 cut(s) 1382
AcyI GRCGYC 1 cut(s) 1992
AfaI GTAC 6 cut(s) 637, 849, 940, 1236, 1289, 2088
AfiI CCNNNNNNNGG 4 cut(s) 238, 456, 835, 993
AflIII ACRYGT 1 cut(s) 2095
AjiI CACGTC 1 cut(s) 1150
AjnI CCWGG 2 cut(s) 1432, 1717
Alw26I GTCTC 3 cut(s) 114, 274, 1599
AlwI GGATC 7 cut(s) 800, 959, 1301, 1690, 1785, 1849, 1860
AlwNI CAGNNNCTG 2 cut(s) 542, 1832
Ama87I CYCGRG 2 cut(s) 516, 1311
AoxI GGCC 7 cut(s) 404, 478, 559, 1170, 1782, 1936, 1959
Asp700I GAANNNNTTC 1 cut(s) 1010
AspA2I CCTAGG 1 cut(s) 43
AspS9I GGNCC 4 cut(s) 40, 440, 878, 1385
AsuC2I CCSGG 1 cut(s) 233
AsuHPI GGTGA 4 cut(s) 93, 104, 1452, 1679
AvaI CYCGRG 2 cut(s) 516, 1311
AvaII GGWCC 4 cut(s) 40, 440, 878, 1385
AvrII CCTAGG 1 cut(s) 43
BaeGI GKGCMC 1 cut(s) 1432
BanI GGYRCC 1 cut(s) 2002
BanII GRGCYC 2 cut(s) 77, 517
BbrPI CACGTG 1 cut(s) 1382
BbsI GAAGAC 2 cut(s) 1478, 1752
BbvCI CCTCAGC 1 cut(s) 658
BccI CCATC 6 cut(s) 303, 425, 740, 1590, 1613, 2117
BceAI ACGGC 2 cut(s) 1117, 1862
BciT130I CCWGG 2 cut(s) 1434, 1719
BciVI GTATCC 1 cut(s) 1339
BcnI CCSGG 1 cut(s) 233
BcoDI GTCTC 3 cut(s) 114, 274, 1599
BfaI CTAG 5 cut(s) 44, 626, 705, 1155, 1871
BfmI CTRYAG 5 cut(s) 165, 588, 864, 1710, 1824
BfuI GTATCC 1 cut(s) 1339
BglII AGATCT 1 cut(s) 311
BlnI CCTAGG 1 cut(s) 43
BmcAI AGTACT 1 cut(s) 940
Bme1390I CCNGG 3 cut(s) 233, 1434, 1719
Bme18I GGWCC 4 cut(s) 40, 440, 878, 1385
BmeT110I CYCGRG 2 cut(s) 516, 1311
BmgBI CACGTC 1 cut(s) 1150
BmgT120I GGNCC 4 cut(s) 40, 440, 878, 1385
BmiI GGNNCC 5 cut(s) 514, 568, 654, 1528, 2004
BmrFI CCNGG 3 cut(s) 233, 1434, 1719
BmsI GCATC 5 cut(s) 700, 724, 797, 1045, 2114
BpiI GAAGAC 2 cut(s) 1478, 1752
BpmI CTGGAG 2 cut(s) 1203, 1581
Bpu10I CCTNAGC 1 cut(s) 658
BpuEI CTTGAG 2 cut(s) 1968, 1992
BpuMI CCSGG 1 cut(s) 233
BsaAI YACGTR 1 cut(s) 1382
BsaHI GRCGYC 1 cut(s) 1992
BsaI GGTCTC 1 cut(s) 1599
BsaJI CCNNGG 8 cut(s) 43, 562, 911, 987, 1432, 1433, 1717, 1718
BsaXI ACNNNNNCTCC 8 cut(s) 190, 220, 504, 534, 1280, 1310, 1615, 1645
Bsc4I CCNNNNNNNGG 4 cut(s) 238, 456, 835, 993
Bse1I ACTGG 1 cut(s) 400
Bse3DI GCAATG 2 cut(s) 58, 840
BseBI CCWGG 2 cut(s) 1434, 1719
BseDI CCNNGG 8 cut(s) 43, 562, 911, 987, 1432, 1433, 1717, 1718
BseGI GGATG 6 cut(s) 295, 556, 613, 700, 751, 1582
BseLI CCNNNNNNNGG 4 cut(s) 238, 456, 835, 993
BseMI GCAATG 2 cut(s) 58, 840
BseMII CTCAG 2 cut(s) 314, 672
BseNI ACTGG 1 cut(s) 400
BseRI GAGGAG 3 cut(s) 435, 660, 2051
BseSI GKGCMC 1 cut(s) 1432
BseX3I CGGCCG 1 cut(s) 478
BseYI CCCAGC 1 cut(s) 1085
BsgI GTGCAG 1 cut(s) 1578
Bsh1285I CGRYCG 1 cut(s) 481
BshFI GGCC 7 cut(s) 406, 480, 561, 1172, 1784, 1938, 1961
BshNI GGYRCC 1 cut(s) 2002
BsiEI CGRYCG 1 cut(s) 481
BsiHKCI CYCGRG 2 cut(s) 516, 1311
BsiSI CCGG 2 cut(s) 232, 2064
BslFI GGGAC 5 cut(s) 332, 994, 1009, 1039, 1527
BslI CCNNNNNNNGG 4 cut(s) 238, 456, 835, 993
BsmAI GTCTC 3 cut(s) 114, 274, 1599
BsmFI GGGAC 5 cut(s) 332, 994, 1009, 1039, 1527
BsmI GAATGC 1 cut(s) 1577
BsnI GGCC 7 cut(s) 406, 480, 561, 1172, 1784, 1938, 1961
Bso31I GGTCTC 1 cut(s) 1599
BsoBI CYCGRG 2 cut(s) 516, 1311
Bsp1286I GDGCHC 3 cut(s) 77, 517, 1432
Bsp1407I TGTACA 1 cut(s) 1287
Bsp19I CCATGG 3 cut(s) 562, 911, 987
BspACI CCGC 6 cut(s) 84, 477, 743, 1158, 1353, 1662
BspANI GGCC 7 cut(s) 406, 480, 561, 1172, 1784, 1938, 1961
BspCNI CTCAG 2 cut(s) 313, 671
BspHI TCATGA 1 cut(s) 1620
BspLI GGNNCC 5 cut(s) 514, 568, 654, 1528, 2004
BspMAI CTGCAG 3 cut(s) 169, 592, 868
BspPI GGATC 7 cut(s) 800, 959, 1301, 1690, 1785, 1849, 1860
BspT107I GGYRCC 1 cut(s) 2002
BspTNI GGTCTC 1 cut(s) 1599
BsrDI GCAATG 2 cut(s) 58, 840
BsrGI TGTACA 1 cut(s) 1287
BsrI ACTGG 1 cut(s) 400
BssECI CCNNGG 8 cut(s) 43, 562, 911, 987, 1432, 1433, 1717, 1718
BssNAI GTATAC 2 cut(s) 67, 1517
BssNI GRCGYC 1 cut(s) 1992
BssT1I CCWWGG 4 cut(s) 43, 562, 911, 987
Bst1107I GTATAC 2 cut(s) 67, 1517
Bst2UI CCWGG 2 cut(s) 1434, 1719
Bst4CI ACNGT 7 cut(s) 527, 601, 766, 801, 875, 895, 2059
Bst6I CTCTTC 1 cut(s) 1381
BstACI GRCGYC 1 cut(s) 1992
BstAPI GCANNNNNTGC 1 cut(s) 1556
BstAUI TGTACA 1 cut(s) 1287
BstBAI YACGTR 1 cut(s) 1382
BstC8I GCNNGC 2 cut(s) 249, 868
BstDEI CTNAG 5 cut(s) 119, 300, 658, 1108, 1740
BstDSI CCRYGG 3 cut(s) 562, 911, 987
BstF5I GGATG 6 cut(s) 295, 556, 613, 700, 751, 1582
BstMAI GTCTC 3 cut(s) 114, 274, 1599
BstMCI CGRYCG 1 cut(s) 481
BstMWI GCNNNNNNNGC 9 cut(s) 584, 719, 749, 821, 830, 929, 1556, 1559, 1827
BstNI CCWGG 2 cut(s) 1434, 1719
BstNSI RCATGY 1 cut(s) 2099
BstSCI CCNGG 3 cut(s) 231, 1432, 1717
BstSFI CTRYAG 5 cut(s) 165, 588, 864, 1710, 1824
BstSLI GKGCMC 1 cut(s) 1432
BstV2I GAAGAC 2 cut(s) 1478, 1752
BstX2I RGATCY 4 cut(s) 311, 1306, 1682, 1841
BstXI CCANNNNNNTGG 1 cut(s) 1553
BstYI RGATCY 4 cut(s) 311, 1306, 1682, 1841
BstZ17I GTATAC 2 cut(s) 67, 1517
BstZI CGGCCG 1 cut(s) 478
BsuI GTATCC 1 cut(s) 1339
BsuRI GGCC 7 cut(s) 406, 480, 561, 1172, 1784, 1938, 1961
BtgI CCRYGG 3 cut(s) 562, 911, 987
BtgZI GCGATG 1 cut(s) 2091
BtrI CACGTC 1 cut(s) 1150
BtsCI GGATG 6 cut(s) 295, 556, 613, 700, 751, 1582
BtsI GCAGTG 1 cut(s) 1663
BtsIMutI CAGTG 8 cut(s) 211, 225, 364, 393, 597, 880, 1008, 1663
Cac8I GCNNGC 2 cut(s) 249, 868
CaiI CAGNNNCTG 2 cut(s) 542, 1832
CciI TCATGA 1 cut(s) 1620
Cfr13I GGNCC 4 cut(s) 40, 440, 878, 1385
Csp6I GTAC 6 cut(s) 636, 848, 939, 1235, 1288, 2087
CviQI GTAC 6 cut(s) 636, 848, 939, 1235, 1288, 2087
DdeI CTNAG 5 cut(s) 119, 300, 658, 1108, 1740
DraI TTTAAA 1 cut(s) 424
EaeI YGGCCR 1 cut(s) 478
EagI CGGCCG 1 cut(s) 478
Eam1104I CTCTTC 1 cut(s) 1381
EarI CTCTTC 1 cut(s) 1381
EclXI CGGCCG 1 cut(s) 478
Eco130I CCWWGG 4 cut(s) 43, 562, 911, 987
Eco147I AGGCCT 1 cut(s) 1172
Eco24I GRGCYC 2 cut(s) 77, 517
Eco31I GGTCTC 1 cut(s) 1599
Eco47I GGWCC 4 cut(s) 40, 440, 878, 1385
Eco52I CGGCCG 1 cut(s) 478
Eco57I CTGAAG 3 cut(s) 519, 984, 1455
Eco72I CACGTG 1 cut(s) 1382
Eco88I CYCGRG 2 cut(s) 516, 1311
EcoO109I RGGNCCY 1 cut(s) 40
EcoRI GAATTC 2 cut(s) 288, 2127
EcoRII CCWGG 2 cut(s) 1432, 1717
EcoT14I CCWWGG 4 cut(s) 43, 562, 911, 987
EcoT38I GRGCYC 2 cut(s) 77, 517
ErhI CCWWGG 4 cut(s) 43, 562, 911, 987
FaqI GGGAC 5 cut(s) 332, 994, 1009, 1039, 1527
FauI CCCGC 1 cut(s) 91
FblI GTMKAC 3 cut(s) 66, 153, 1516
FokI GGATG 6 cut(s) 282, 563, 620, 707, 758, 1569
FriOI GRGCYC 2 cut(s) 77, 517
FspBI CTAG 5 cut(s) 44, 626, 705, 1155, 1871
GsaI CCCAGC 1 cut(s) 1089
GsuI CTGGAG 2 cut(s) 1203, 1581
HaeIII GGCC 7 cut(s) 406, 480, 561, 1172, 1784, 1938, 1961
HapII CCGG 2 cut(s) 232, 2064
Hin1I GRCGYC 1 cut(s) 1992
HincII GTYRAC 2 cut(s) 154, 1990
HindII GTYRAC 2 cut(s) 154, 1990
HindIII AAGCTT 1 cut(s) 1734
HinfI GANTC 4 cut(s) 410, 539, 887, 1483
HpaII CCGG 2 cut(s) 232, 2064
HphI GGTGA 4 cut(s) 93, 104, 1452, 1679
Hpy166II GTNNAC 8 cut(s) 67, 154, 523, 1006, 1290, 1385, 1517, 1990
Hpy188I TCNGA 9 cut(s) 303, 415, 538, 1075, 1099, 1228, 1278, 1834, 2122
Hpy8I GTNNAC 8 cut(s) 67, 154, 523, 1006, 1290, 1385, 1517, 1990
HpyAV CCTTC 5 cut(s) 27, 253, 1875, 2029, 2035
HpyCH4III ACNGT 7 cut(s) 527, 601, 766, 801, 875, 895, 2059
HpyCH4IV ACGT 3 cut(s) 1149, 1381, 1992
HpyF10VI GCNNNNNNNGC 9 cut(s) 584, 719, 749, 821, 830, 929, 1556, 1559, 1827
HpyF3I CTNAG 5 cut(s) 119, 300, 658, 1108, 1740
HpySE526I ACGT 3 cut(s) 1149, 1381, 1992
Hsp92I GRCGYC 1 cut(s) 1992
LmnI GCTCC 5 cut(s) 512, 749, 1076, 1089, 1184
LweI GCATC 5 cut(s) 700, 724, 797, 1045, 2114
MaeI CTAG 5 cut(s) 44, 626, 705, 1155, 1871
MaeII ACGT 3 cut(s) 1149, 1381, 1992
MaeIII GTNAC 9 cut(s) 26, 188, 1145, 1150, 1438, 1474, 1642, 1882, 2053
MboII GAAGA 5 cut(s) 525, 1346, 1368, 1478, 1757
MflI RGATCY 4 cut(s) 311, 1306, 1682, 1841
MhlI GDGCHC 3 cut(s) 77, 517, 1432
MlyI GAGTC 2 cut(s) 548, 1492
MroXI GAANNNNTTC 1 cut(s) 1010
MseI TTAA 8 cut(s) 9, 423, 1019, 1125, 1196, 1572, 1914, 1926
MspA1I CMGCKG 3 cut(s) 1553, 1562, 1664
MspI CCGG 2 cut(s) 232, 2064
MspR9I CCNGG 3 cut(s) 233, 1434, 1719
Mva1269I GAATGC 1 cut(s) 1577
MvaI CCWGG 2 cut(s) 1434, 1719
MwoI GCNNNNNNNGC 9 cut(s) 584, 719, 749, 821, 830, 929, 1556, 1559, 1827
NciI CCSGG 1 cut(s) 233
NcoI CCATGG 3 cut(s) 562, 911, 987
NlaIV GGNNCC 5 cut(s) 514, 568, 654, 1528, 2004
NmuCI GTSAC 4 cut(s) 1145, 1150, 1882, 2053
NspI RCATGY 1 cut(s) 2099
PaeR7I CTCGAG 1 cut(s) 1311
PagI TCATGA 1 cut(s) 1620
PasI CCCWGGG 2 cut(s) 1433, 1718
PceI AGGCCT 1 cut(s) 1172
PciI ACATGT 1 cut(s) 2095
PctI GAATGC 1 cut(s) 1577
PdmI GAANNNNTTC 1 cut(s) 1010
PfeI GAWTC 2 cut(s) 410, 887
PflMI CCANNNNNTGG 2 cut(s) 456, 835
PleI GAGTC 2 cut(s) 547, 1491
PmaCI CACGTG 1 cut(s) 1382
PmlI CACGTG 1 cut(s) 1382
PpsI GAGTC 2 cut(s) 547, 1491
Ppu21I YACGTR 1 cut(s) 1382
PpuMI RGGWCCY 1 cut(s) 40
PscI ACATGT 1 cut(s) 2095
Psp5II RGGWCCY 1 cut(s) 40
Psp6I CCWGG 2 cut(s) 1432, 1717
PspCI CACGTG 1 cut(s) 1382
PspFI CCCAGC 1 cut(s) 1085
PspGI CCWGG 2 cut(s) 1432, 1717
PspN4I GGNNCC 5 cut(s) 514, 568, 654, 1528, 2004
PspPI GGNCC 4 cut(s) 40, 440, 878, 1385
PspPPI RGGWCCY 1 cut(s) 40
PspXI VCTCGAGB 1 cut(s) 1311
PstI CTGCAG 3 cut(s) 169, 592, 868
PstNI CAGNNNCTG 2 cut(s) 542, 1832
PsuI RGATCY 4 cut(s) 311, 1306, 1682, 1841
PvuII CAGCTG 2 cut(s) 1553, 1562
RsaI GTAC 6 cut(s) 637, 849, 940, 1236, 1289, 2088
RsaNI GTAC 6 cut(s) 636, 848, 939, 1235, 1288, 2087
SalI GTCGAC 1 cut(s) 152
SaqAI TTAA 8 cut(s) 9, 423, 1019, 1125, 1196, 1572, 1914, 1926
Sau96I GGNCC 4 cut(s) 40, 440, 878, 1385
ScaI AGTACT 1 cut(s) 940
SchI GAGTC 2 cut(s) 548, 1492
ScrFI CCNGG 3 cut(s) 233, 1434, 1719
SduI GDGCHC 3 cut(s) 77, 517, 1432
SfaNI GCATC 5 cut(s) 700, 724, 797, 1045, 2114
SfcI CTRYAG 5 cut(s) 165, 588, 864, 1710, 1824
Sfr274I CTCGAG 1 cut(s) 1311
SinI GGWCC 4 cut(s) 40, 440, 878, 1385
SlaI CTCGAG 1 cut(s) 1311
SmlI CTYRAG 3 cut(s) 1311, 1983, 2007
SmoI CTYRAG 3 cut(s) 1311, 1983, 2007
SseBI AGGCCT 1 cut(s) 1172
SsiI CCGC 6 cut(s) 84, 477, 743, 1158, 1353, 1662
SspI AATATT 1 cut(s) 1968
SspMI CTAG 5 cut(s) 44, 626, 705, 1155, 1871
StuI AGGCCT 1 cut(s) 1172
StyD4I CCNGG 3 cut(s) 231, 1432, 1717
StyI CCWWGG 4 cut(s) 43, 562, 911, 987
TaaI ACNGT 7 cut(s) 527, 601, 766, 801, 875, 895, 2059
TaiI ACGT 3 cut(s) 1152, 1384, 1995
TaqI TCGA 3 cut(s) 153, 1080, 1312
TaqII GACCGA 1 cut(s) 1759
TatI WGTACW 3 cut(s) 938, 1287, 2086
TauI GCSGC 3 cut(s) 480, 1355, 1664
TfiI GAWTC 2 cut(s) 410, 887
Tru1I TTAA 8 cut(s) 9, 423, 1019, 1125, 1196, 1572, 1914, 1926
Tru9I TTAA 8 cut(s) 9, 423, 1019, 1125, 1196, 1572, 1914, 1926
TscAI CASTG 8 cut(s) 211, 232, 364, 400, 604, 880, 1008, 1663
TseFI GTSAC 4 cut(s) 1145, 1150, 1882, 2053
Tsp45I GTSAC 4 cut(s) 1145, 1150, 1882, 2053
TspDTI ATGAA 9 cut(s) 272, 519, 567, 759, 1359, 1652, 1746, 2097, 2120
TspGWI ACGGA 1 cut(s) 364
TspRI CASTG 8 cut(s) 211, 232, 364, 400, 604, 880, 1008, 1663
Van91I CCANNNNNTGG 2 cut(s) 456, 835
VpaK11BI GGWCC 4 cut(s) 40, 440, 878, 1385
XceI RCATGY 1 cut(s) 2099
XhoI CTCGAG 1 cut(s) 1311
XmaJI CCTAGG 1 cut(s) 43
XmiI GTMKAC 3 cut(s) 66, 153, 1516
XmnI GAANNNNTTC 1 cut(s) 1010
XspI CTAG 5 cut(s) 44, 626, 705, 1155, 1871
ZraI GACGTC 1 cut(s) 1993
ZrmI AGTACT 1 cut(s) 940
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.