FvH4_3g36720

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000175
Physical Location & Seq
Forward (+)
31480003 .. 31483459
3457 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g36720.t1

Sequence Viewer

Length: 2061 bp
ATGGATACCCTTCTGGAAGAGTTTCCAAATTCCATGAACAACTTCATGTTTGACCAAAACTCCATCCCATCCTTTCCAGATCACAATCCTCCTGATCAGTTTGAAGCCAATCATGAACTCACCAATCTCAGTTTCAGTCCCGCAAATTCATACCCTTATAGTGATTTCTCTCCTTCCTCTTCTTCGGGTTTGAGCTCCGAGGGGGTGAATTCCCCAGACGACTCCAATACCATTCTCAGATTCATCAGTGAGATGCTTATGCAAGAAGAAGACTTGGAGAACAAGCCTTGCATGCTTCAGGATTGTTTGGCTCTCCGAGCTGCTGAGAAATCCTTATATGATGTCCTGGTTCAGGAGGATCCCTCTTCAACTAGTCAGAATCTCGCTTCCACATACCAGAATGTTGGGAGTCCAGATGATGTCAGCAACCACAGCAGCAGTAGCTCTCATGCTGCCAGCAACTGGGTTGACTCGGATTTCGATTGTGTTCAAGAGGTTTTAGATACTGTGATTCCAAATCCTTTTGTTTCAAATGGCAAGGGTGGAGTTACAGATCTAGAAGGCAACTCATCATTTCCTGCAGATGCAAGGCAACTCTCTAGTGATGTGAATTTCAGTCCAGACAAGGGTGAGAGTGAGTCAAGAAATGGATCAAGGAGCAAGAAAAATCGTTACCGGGAGGATGGCGATTATGTAGATGAAGAGAGGAGCTACAAGCAGTCAGCAGTATATGCTGACGAAGCTGAGCCAGAAGAGATGTTTGATCAGGTACTACTCTGTCAGGGTGATAAATCACGTTCATCTCCACAAGTATCTGAGCTCCAAGATGGAAACGGGAAGCTGCAGCGTAATGGCAAGGCGAAAGGATCCAAGGCCAAAAAAACAGGCAAGAAAAAGCCGGATGACAATAAAGAGATGGTGGATTTACAGACACTGCTTACTCAATGTGCACAAGCTGTTGCTAGCTTTGACAAAAGGAATGCAACTGAGCAACTGAAGCTGATAAGGCAGCACTCGTCTCCCTATGGCGATGGAACTCAAAGATTAGCTCATTACATGGCTAATGGACTCGAAGAACGCTTGACTGCAGCGGTTTCATCGGTTTCATTGTACAAGCAGTCTGTTTGCTTTTCCAGAACTAACATGTCAGCTGCTGATATCTTGAAAGCCTACCAGACTTATATCACAGCATGCCCTTTTAAGAAGATGTCGAATTTCTATGCTAACCGAACGATTAGCAAGCTGGCAGAGAAGGCAACCAGGCTTCACATAATTGATTTTGGTATTCTCTATGGGTACCAATGGCCTTGCCTTATCCAAGCTCTCTCGAAAAGACCTGGCGGACCTCCCATGGTTCGCATTACTGGAATTGAGTTTCCCCAATCAGGTTTTCGACCTTCAGAAAGGCTTGAAGAGACAGGGCGCCGCCTACAGAATTACTGCAAGAGATTCAATGTCCCATTTCAGTACACTGCCATAGCAAAGAATTGGGAAACCATTCAATATGAGGATATCAAAATCGACAGAGATGAGATGACTGTAGTGAACTGCATGGACAGGTTAAAGAACTTACCAGATGATGCAGTCTTGGACAGCCCCAGAGATACAGTTTTGAAGCTGATCAGGAGAATCAACCCGGATGTATTCATACATGGAATTGTTAATGGAACCTACAATGCACCTTTCTTCGACACACGGTTCCGGGAGGCACTCTACCATTTCTCTTCCTTGTTTGATATGTATGAGGAGACTTTGCTCAGAGAAGATCAACAGAGGCTGCTCTTTGAACAAGAGATATTTGGTAGAGATCTTATAAATGTGGTAGCATGTGAAGGTTCAATGAGGCTTGAAAGGCCTGAAACATACAAGCAGTGGCAGATTAGAAATAAAAGAGCTGGGTTCAAGCAGTTGCCATTAGATCAGGAAATCTTGAAGAAAGTAAGGACTATGGTAAAGTCTGAATATCATAAAGATTTTGTTGTCGATGAAGATGGCAGGTGGGTCTTGCAGGGATGGAAAGGCCGAATAATTCAAGCTATTTCTTGCTGGAAGTCTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

687

Amino Acids

77.92

Weight (kDa)

5.29

Isoelectric Point (pI)

54.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 310 - 684 2.1e-119 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000175)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1814
AarI CACCTGC 1 cut(s) 1986
Acc36I ACCTGC 1 cut(s) 1986
Acc65I GGTACC 1 cut(s) 1296
AccB1I GGYRCC 2 cut(s) 1296, 1422
AccB7I CCANNNNNTGG 1 cut(s) 462
AciI CCGC 4 cut(s) 141, 1091, 1341, 1426
AclWI GGATC 5 cut(s) 353, 366, 658, 861, 874
AcsI RAATTY 5 cut(s) 28, 145, 208, 610, 1213
AcuI CTGAAG 3 cut(s) 281, 1016, 1383
AcyI GRCGYC 1 cut(s) 1423
AfaI GTAC 4 cut(s) 771, 1112, 1298, 1469
AfiI CCNNNNNNNGG 4 cut(s) 352, 462, 626, 1385
AflIII ACRYGT 1 cut(s) 1143
AhlI ACTAGT 1 cut(s) 371
AjnI CCWGG 3 cut(s) 345, 1259, 1336
AjuI GAANNNNNNNTTGG 4 cut(s) 116, 148, 1374, 1406
Alw21I GWGCWC 3 cut(s) 197, 822, 952
Alw26I GTCTC 3 cut(s) 1023, 1409, 1742
Alw44I GTGCAC 1 cut(s) 948
AlwI GGATC 5 cut(s) 353, 366, 658, 861, 874
AlwNI CAGNNNCTG 4 cut(s) 462, 934, 1154, 1777
AoxI GGCC 4 cut(s) 873, 1304, 1853, 2020
ApaLI GTGCAC 1 cut(s) 948
ApeKI GCWGC 9 cut(s) 320, 435, 452, 841, 844, 1009, 1088, 1151, 1777
ApoI RAATTY 5 cut(s) 28, 145, 208, 610, 1213
ArsI GACNNNNNNTTYG 2 cut(s) 461, 493
Asp700I GAANNNNTTC 3 cut(s) 21, 41, 1497
Asp718I GGTACC 1 cut(s) 1296
AspLEI GCGC 1 cut(s) 1425
AspS9I GGNCC 1 cut(s) 1343
AsuC2I CCSGG 3 cut(s) 677, 1637, 1703
AsuHPI GGTGA 4 cut(s) 112, 217, 641, 797
AsuNHI GCTAGC 1 cut(s) 962
AvaII GGWCC 1 cut(s) 1343
BaeGI GKGCMC 1 cut(s) 952
BamHI GGATCC 2 cut(s) 358, 866
BanI GGYRCC 2 cut(s) 1296, 1422
BanII GRGCYC 2 cut(s) 197, 822
BbsI GAAGAC 1 cut(s) 276
Bbv12I GWGCWC 3 cut(s) 197, 822, 952
BbvI GCAGC 9 cut(s) 307, 439, 447, 828, 856, 1021, 1100, 1138, 1764
BccI CCATC 8 cut(s) 71, 76, 677, 821, 910, 1025, 1985, 2007
BciT130I CCWGG 3 cut(s) 347, 1261, 1338
BclI TGATCA 3 cut(s) 94, 763, 1620
BcnI CCSGG 3 cut(s) 677, 1637, 1703
BcoDI GTCTC 3 cut(s) 1023, 1409, 1742
BcuI ACTAGT 1 cut(s) 371
BfaI CTAG 4 cut(s) 372, 557, 600, 963
BfmI CTRYAG 5 cut(s) 579, 842, 1086, 1430, 1539
BfoI RGCGCY 1 cut(s) 1426
BfuAI ACCTGC 1 cut(s) 1986
BglII AGATCT 2 cut(s) 553, 1807
BlpI GCTNAGC 1 cut(s) 744
Bme1390I CCNGG 6 cut(s) 347, 677, 1261, 1338, 1637, 1703
Bme18I GGWCC 1 cut(s) 1343
BmgT120I GGNCC 1 cut(s) 1343
BmiI GGNNCC 6 cut(s) 360, 868, 1298, 1424, 1669, 1700
BmrFI CCNGG 6 cut(s) 347, 677, 1261, 1338, 1637, 1703
BmrI ACTGGG 1 cut(s) 472
BmsI GCATC 3 cut(s) 243, 574, 1570
BmtI GCTAGC 1 cut(s) 966
BmuI ACTGGG 1 cut(s) 472
BpiI GAAGAC 1 cut(s) 276
BplI GAGNNNNNCTC 2 cut(s) 347, 379
Bpu1102I GCTNAGC 1 cut(s) 744
BpuMI CCSGG 3 cut(s) 677, 1637, 1703
BsaBI GATNNNNATC 1 cut(s) 84
BsaHI GRCGYC 1 cut(s) 1423
BsaJI CCNNGG 3 cut(s) 198, 870, 1350
BsaXI ACNNNNNCTCC 2 cut(s) 44, 74
Bsc4I CCNNNNNNNGG 4 cut(s) 352, 462, 626, 1385
Bse1I ACTGG 2 cut(s) 467, 1369
Bse8I GATNNNNATC 1 cut(s) 84
BseBI CCWGG 3 cut(s) 347, 1261, 1338
BseDI CCNNGG 3 cut(s) 198, 870, 1350
BseGI GGATG 6 cut(s) 63, 68, 688, 907, 1645, 2018
BseJI GATNNNNATC 1 cut(s) 84
BseLI CCNNNNNNNGG 4 cut(s) 352, 462, 626, 1385
BseMII CTCAG 7 cut(s) 142, 250, 315, 735, 807, 978, 1771
BseNI ACTGG 2 cut(s) 467, 1369
BseRI GAGGAG 2 cut(s) 721, 1760
BseSI GKGCMC 1 cut(s) 952
BseXI GCAGC 9 cut(s) 307, 439, 447, 828, 856, 1021, 1100, 1138, 1764
BseYI CCCAGC 1 cut(s) 1895
BshFI GGCC 4 cut(s) 875, 1306, 1855, 2022
BshNI GGYRCC 2 cut(s) 1296, 1422
BsiHKAI GWGCWC 3 cut(s) 197, 822, 952
BsiSI CCGG 4 cut(s) 676, 899, 1637, 1702
BslFI GGGAC 2 cut(s) 123, 1442
BslI CCNNNNNNNGG 4 cut(s) 352, 462, 626, 1385
BsmAI GTCTC 3 cut(s) 1023, 1409, 1742
BsmBI CGTCTC 1 cut(s) 1023
BsmFI GGGAC 2 cut(s) 123, 1442
BsmI GAATGC 1 cut(s) 985
BsnI GGCC 4 cut(s) 875, 1306, 1855, 2022
Bsp1286I GDGCHC 3 cut(s) 197, 822, 952
Bsp1407I TGTACA 1 cut(s) 1110
Bsp1720I GCTNAGC 1 cut(s) 744
Bsp19I CCATGG 1 cut(s) 1350
BspACI CCGC 4 cut(s) 141, 1091, 1341, 1426
BspANI GGCC 4 cut(s) 875, 1306, 1855, 2022
BspCNI CTCAG 7 cut(s) 141, 249, 316, 736, 808, 979, 1770
BspHI TCATGA 1 cut(s) 112
BspLI GGNNCC 6 cut(s) 360, 868, 1298, 1424, 1669, 1700
BspMAI CTGCAG 3 cut(s) 583, 846, 1090
BspMI ACCTGC 1 cut(s) 1986
BspOI GCTAGC 1 cut(s) 966
BspPI GGATC 5 cut(s) 353, 366, 658, 861, 874
BspT107I GGYRCC 2 cut(s) 1296, 1422
BsrGI TGTACA 1 cut(s) 1110
BsrI ACTGG 2 cut(s) 467, 1369
BssECI CCNNGG 3 cut(s) 198, 870, 1350
BssNI GRCGYC 1 cut(s) 1423
BssT1I CCWWGG 2 cut(s) 870, 1350
Bst2UI CCWGG 3 cut(s) 347, 1261, 1338
Bst4CI ACNGT 4 cut(s) 508, 1540, 1609, 1698
Bst6I CTCTTC 7 cut(s) 12, 184, 370, 696, 747, 1407, 1729
BstACI GRCGYC 1 cut(s) 1423
BstAPI GCANNNNNTGC 1 cut(s) 731
BstAUI TGTACA 1 cut(s) 1110
BstC8I GCNNGC 6 cut(s) 293, 457, 964, 1192, 1241, 1245
BstDEI CTNAG 7 cut(s) 128, 236, 324, 744, 816, 987, 1757
BstDSI CCRYGG 1 cut(s) 1350
BstENI CCTNNNNNAGG 1 cut(s) 350
BstF5I GGATG 6 cut(s) 63, 68, 688, 907, 1645, 2018
BstH2I RGCGCY 1 cut(s) 1426
BstHHI GCGC 1 cut(s) 1425
BstMAI GTCTC 3 cut(s) 1023, 1409, 1742
BstNI CCWGG 3 cut(s) 347, 1261, 1338
BstNSI RCATGY 4 cut(s) 295, 1147, 1194, 1830
BstSCI CCNGG 6 cut(s) 345, 675, 1259, 1336, 1635, 1701
BstSFI CTRYAG 5 cut(s) 579, 842, 1086, 1430, 1539
BstSLI GKGCMC 1 cut(s) 952
BstV1I GCAGC 9 cut(s) 307, 439, 447, 828, 856, 1021, 1100, 1138, 1764
BstV2I GAAGAC 1 cut(s) 276
BstX2I RGATCY 4 cut(s) 358, 553, 866, 1807
BstXI CCANNNNNNTGG 1 cut(s) 404
BstYI RGATCY 4 cut(s) 358, 553, 866, 1807
BsuRI GGCC 4 cut(s) 875, 1306, 1855, 2022
BtgI CCRYGG 1 cut(s) 1350
BtgZI GCGATG 1 cut(s) 1044
BtsCI GGATG 6 cut(s) 63, 68, 688, 907, 1645, 2018
BtsI GCAGTG 3 cut(s) 932, 1470, 1877
BtsIMutI CAGTG 4 cut(s) 253, 932, 1470, 1877
BveI ACCTGC 1 cut(s) 1986
Cac8I GCNNGC 6 cut(s) 293, 457, 964, 1192, 1241, 1245
CaiI CAGNNNCTG 4 cut(s) 462, 934, 1154, 1777
CciI TCATGA 1 cut(s) 112
CfoI GCGC 1 cut(s) 1425
Cfr13I GGNCC 1 cut(s) 1343
Csp6I GTAC 4 cut(s) 770, 1111, 1297, 1468
CviQI GTAC 4 cut(s) 770, 1111, 1297, 1468
DdeI CTNAG 7 cut(s) 128, 236, 324, 744, 816, 987, 1757
DinI GGCGCC 1 cut(s) 1424
Eam1104I CTCTTC 7 cut(s) 12, 184, 370, 696, 747, 1407, 1729
EarI CTCTTC 7 cut(s) 12, 184, 370, 696, 747, 1407, 1729
EciI GGCGGA 1 cut(s) 1356
Ecl136II GAGCTC 2 cut(s) 195, 820
Eco130I CCWWGG 2 cut(s) 870, 1350
Eco147I AGGCCT 1 cut(s) 1855
Eco24I GRGCYC 2 cut(s) 197, 822
Eco32I GATATC 2 cut(s) 1159, 1513
Eco47I GGWCC 1 cut(s) 1343
Eco53kI GAGCTC 2 cut(s) 195, 820
Eco57I CTGAAG 3 cut(s) 281, 1016, 1383
EcoICRI GAGCTC 2 cut(s) 195, 820
EcoNI CCTNNNNNAGG 1 cut(s) 350
EcoRI GAATTC 1 cut(s) 208
EcoRII CCWGG 3 cut(s) 345, 1259, 1336
EcoRV GATATC 2 cut(s) 1159, 1513
EcoT14I CCWWGG 2 cut(s) 870, 1350
EcoT38I GRGCYC 2 cut(s) 197, 822
EgeI GGCGCC 1 cut(s) 1424
EheI GGCGCC 1 cut(s) 1424
ErhI CCWWGG 2 cut(s) 870, 1350
Esp3I CGTCTC 1 cut(s) 1023
FaqI GGGAC 2 cut(s) 123, 1442
FauI CCCGC 1 cut(s) 148
FbaI TGATCA 3 cut(s) 94, 763, 1620
FokI GGATG 6 cut(s) 50, 55, 695, 914, 1652, 2025
FriOI GRGCYC 2 cut(s) 197, 822
FspBI CTAG 4 cut(s) 372, 557, 600, 963
GlaI GCGC 1 cut(s) 1424
GsaI CCCAGC 1 cut(s) 1899
HaeII RGCGCY 1 cut(s) 1426
HaeIII GGCC 4 cut(s) 875, 1306, 1855, 2022
HapII CCGG 4 cut(s) 676, 899, 1637, 1702
HhaI GCGC 1 cut(s) 1425
Hin1I GRCGYC 1 cut(s) 1423
Hin6I GCGC 1 cut(s) 1423
HinP1I GCGC 1 cut(s) 1423
HincII GTYRAC 1 cut(s) 469
HindII GTYRAC 1 cut(s) 469
HpaII CCGG 4 cut(s) 676, 899, 1637, 1702
HphI GGTGA 4 cut(s) 112, 217, 641, 797
Hpy166II GTNNAC 4 cut(s) 469, 950, 1470, 1546
Hpy188I TCNGA 9 cut(s) 199, 239, 317, 378, 475, 817, 1402, 1760, 1960
Hpy8I GTNNAC 4 cut(s) 469, 950, 1470, 1546
HpyAV CCTTC 6 cut(s) 20, 183, 554, 1246, 1407, 1826
HpyCH4III ACNGT 4 cut(s) 508, 1540, 1609, 1698
HpyCH4IV ACGT 1 cut(s) 796
HpyF3I CTNAG 7 cut(s) 128, 236, 324, 744, 816, 987, 1757
HpySE526I ACGT 1 cut(s) 796
Hsp92I GRCGYC 1 cut(s) 1423
HspAI GCGC 1 cut(s) 1423
KasI GGCGCC 1 cut(s) 1422
KpnI GGTACC 1 cut(s) 1300
Ksp22I TGATCA 3 cut(s) 94, 763, 1620
LmnI GCTCC 4 cut(s) 200, 657, 708, 825
Lsp1109I GCAGC 9 cut(s) 307, 439, 447, 828, 856, 1021, 1100, 1138, 1764
LweI GCATC 3 cut(s) 243, 574, 1570
MaeI CTAG 4 cut(s) 372, 557, 600, 963
MaeII ACGT 1 cut(s) 796
MaeIII GTNAC 2 cut(s) 547, 671
MflI RGATCY 4 cut(s) 358, 553, 866, 1807
MhlI GDGCHC 3 cut(s) 197, 822, 952
Mly113I GGCGCC 1 cut(s) 1423
MlyI GAGTC 5 cut(s) 215, 418, 464, 647, 1062
MroXI GAANNNNTTC 3 cut(s) 21, 41, 1497
MseI TTAA 3 cut(s) 1200, 1562, 1662
MspA1I CMGCKG 2 cut(s) 1091, 1151
MspI CCGG 4 cut(s) 676, 899, 1637, 1702
MspR9I CCNGG 6 cut(s) 347, 677, 1261, 1338, 1637, 1703
Mva1269I GAATGC 1 cut(s) 985
MvaI CCWGG 3 cut(s) 347, 1261, 1338
NarI GGCGCC 1 cut(s) 1423
NciI CCSGG 3 cut(s) 677, 1637, 1703
NcoI CCATGG 1 cut(s) 1350
NheI GCTAGC 1 cut(s) 962
NlaIV GGNNCC 6 cut(s) 360, 868, 1298, 1424, 1669, 1700
NspI RCATGY 4 cut(s) 295, 1147, 1194, 1830
PaeI GCATGC 2 cut(s) 295, 1194
PagI TCATGA 1 cut(s) 112
PaqCI CACCTGC 1 cut(s) 1986
PceI AGGCCT 1 cut(s) 1855
PciI ACATGT 1 cut(s) 1143
PctI GAATGC 1 cut(s) 985
PdmI GAANNNNTTC 3 cut(s) 21, 41, 1497
PfeI GAWTC 5 cut(s) 240, 379, 511, 1449, 1629
PflMI CCANNNNNTGG 1 cut(s) 462
PfoI TCCNGGA 1 cut(s) 1701
PleI GAGTC 5 cut(s) 215, 417, 464, 646, 1062
PluTI GGCGCC 1 cut(s) 1426
PpsI GAGTC 5 cut(s) 215, 417, 464, 646, 1062
PscI ACATGT 1 cut(s) 1143
PsiI TTATAA 1 cut(s) 1814
Psp124BI GAGCTC 2 cut(s) 197, 822
Psp6I CCWGG 3 cut(s) 345, 1259, 1336
PspFI CCCAGC 1 cut(s) 1895
PspGI CCWGG 3 cut(s) 345, 1259, 1336
PspN4I GGNNCC 6 cut(s) 360, 868, 1298, 1424, 1669, 1700
PspPI GGNCC 1 cut(s) 1343
PstI CTGCAG 3 cut(s) 583, 846, 1090
PstNI CAGNNNCTG 4 cut(s) 462, 934, 1154, 1777
PsuI RGATCY 4 cut(s) 358, 553, 866, 1807
PvuII CAGCTG 1 cut(s) 1151
RsaI GTAC 4 cut(s) 771, 1112, 1298, 1469
RsaNI GTAC 4 cut(s) 770, 1111, 1297, 1468
SacI GAGCTC 2 cut(s) 197, 822
SaqAI TTAA 3 cut(s) 1200, 1562, 1662
Sau96I GGNCC 1 cut(s) 1343
SchI GAGTC 5 cut(s) 215, 418, 464, 647, 1062
ScrFI CCNGG 6 cut(s) 347, 677, 1261, 1338, 1637, 1703
SduI GDGCHC 3 cut(s) 197, 822, 952
SfaNI GCATC 3 cut(s) 243, 574, 1570
SfcI CTRYAG 5 cut(s) 579, 842, 1086, 1430, 1539
SfoI GGCGCC 1 cut(s) 1424
SinI GGWCC 1 cut(s) 1343
SpeI ACTAGT 1 cut(s) 371
SphI GCATGC 2 cut(s) 295, 1194
SseBI AGGCCT 1 cut(s) 1855
SsiI CCGC 4 cut(s) 141, 1091, 1341, 1426
SspDI GGCGCC 1 cut(s) 1422
SspMI CTAG 4 cut(s) 372, 557, 600, 963
SstI GAGCTC 2 cut(s) 197, 822
StuI AGGCCT 1 cut(s) 1855
StyD4I CCNGG 6 cut(s) 345, 675, 1259, 1336, 1635, 1701
StyI CCWWGG 2 cut(s) 870, 1350
TaaI ACNGT 4 cut(s) 508, 1540, 1609, 1698
TaiI ACGT 1 cut(s) 799
TaqI TCGA 8 cut(s) 480, 1071, 1211, 1328, 1393, 1521, 1689, 1983
TatI WGTACW 2 cut(s) 1110, 1467
TauI GCSGC 1 cut(s) 1428
TfiI GAWTC 5 cut(s) 240, 379, 511, 1449, 1629
Tru1I TTAA 3 cut(s) 1200, 1562, 1662
Tru9I TTAA 3 cut(s) 1200, 1562, 1662
TscAI CASTG 4 cut(s) 253, 939, 1477, 1877
TseI GCWGC 9 cut(s) 320, 435, 452, 841, 844, 1009, 1088, 1151, 1777
TspRI CASTG 4 cut(s) 253, 939, 1477, 1877
Van91I CCANNNNNTGG 1 cut(s) 462
VneI GTGCAC 1 cut(s) 948
VpaK11BI GGWCC 1 cut(s) 1343
XagI CCTNNNNNAGG 1 cut(s) 350
XapI RAATTY 5 cut(s) 28, 145, 208, 610, 1213
XbaI TCTAGA 1 cut(s) 556
XceI RCATGY 4 cut(s) 295, 1147, 1194, 1830
XmnI GAANNNNTTC 3 cut(s) 21, 41, 1497
XspI CTAG 4 cut(s) 372, 557, 600, 963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.