Belongs to the GRAS family
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1795 |
| Acc36I | ACCTGC | 2 cut(s) | 1765, 1795 |
| Acc65I | GGTACC | 1 cut(s) | 534 |
| AccB1I | GGYRCC | 2 cut(s) | 534, 1807 |
| AccBSI | CCGCTC | 1 cut(s) | 858 |
| AccI | GTMKAC | 1 cut(s) | 1093 |
| AccII | CGCG | 1 cut(s) | 783 |
| AciI | CCGC | 3 cut(s) | 317, 856, 1672 |
| AclWI | GGATC | 4 cut(s) | 139, 290, 303, 900 |
| AcsI | RAATTY | 2 cut(s) | 463, 574 |
| AcuI | CTGAAG | 4 cut(s) | 411, 986, 1871, 1892 |
| AcvI | CACGTG | 1 cut(s) | 328 |
| AcyI | GRCGYC | 1 cut(s) | 1378 |
| AfaI | GTAC | 4 cut(s) | 182, 332, 536, 1424 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 554, 1340, 1497 |
| AflIII | ACRYGT | 2 cut(s) | 327, 1161 |
| AgeI | ACCGGT | 1 cut(s) | 1452 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1377 |
| AjiI | CACGTC | 1 cut(s) | 526 |
| AjnI | CCWGG | 2 cut(s) | 1339, 1818 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 62, 94, 306, 338 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 481, 513 |
| AluBI | AGCT | 6 cut(s) | 126, 339, 695, 1202, 1330, 1429 |
| AluI | AGCT | 6 cut(s) | 126, 339, 695, 1202, 1330, 1429 |
| Alw21I | GWGCWC | 4 cut(s) | 128, 177, 348, 922 |
| Alw26I | GTCTC | 2 cut(s) | 1364, 1751 |
| Alw44I | GTGCAC | 1 cut(s) | 918 |
| AlwI | GGATC | 4 cut(s) | 139, 290, 303, 900 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1109, 1675 |
| Ama87I | CYCGRG | 2 cut(s) | 127, 550 |
| AoxI | GGCC | 6 cut(s) | 246, 924, 1036, 1259, 1644, 1751 |
| ApaLI | GTGCAC | 1 cut(s) | 918 |
| ApeKI | GCWGC | 6 cut(s) | 257, 681, 695, 820, 1397, 1669 |
| ApoI | RAATTY | 2 cut(s) | 463, 574 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 401, 433 |
| AseI | ATTAAT | 1 cut(s) | 1530 |
| AsiGI | ACCGGT | 1 cut(s) | 1452 |
| Asp718I | GGTACC | 1 cut(s) | 534 |
| AspA2I | CCTAGG | 1 cut(s) | 1496 |
| AspLEI | GCGC | 1 cut(s) | 1609 |
| AspS9I | GGNCC | 3 cut(s) | 247, 1260, 1298 |
| AsuC2I | CCSGG | 3 cut(s) | 115, 551, 552 |
| AsuHPI | GGTGA | 4 cut(s) | 716, 1010, 1498, 1569 |
| AvaI | CYCGRG | 2 cut(s) | 127, 550 |
| AvaII | GGWCC | 1 cut(s) | 1298 |
| AvrII | CCTAGG | 1 cut(s) | 1496 |
| BaeGI | GKGCMC | 1 cut(s) | 922 |
| BamHI | GGATCC | 1 cut(s) | 295 |
| BanI | GGYRCC | 2 cut(s) | 534, 1807 |
| BanII | GRGCYC | 1 cut(s) | 128 |
| BauI | CACGAG | 1 cut(s) | 1656 |
| BbrPI | CACGTG | 1 cut(s) | 328 |
| Bbv12I | GWGCWC | 4 cut(s) | 128, 177, 348, 922 |
| BbvI | GCAGC | 6 cut(s) | 244, 682, 693, 832, 1384, 1681 |
| BccI | CCATC | 7 cut(s) | 108, 131, 593, 647, 1028, 1886, 1908 |
| BceAI | ACGGC | 1 cut(s) | 911 |
| BciT130I | CCWGG | 2 cut(s) | 1341, 1820 |
| BclI | TGATCA | 1 cut(s) | 1518 |
| BcnI | CCSGG | 3 cut(s) | 115, 551, 552 |
| BcoDI | GTCTC | 2 cut(s) | 1364, 1751 |
| BfaI | CTAG | 4 cut(s) | 393, 402, 1199, 1497 |
| BfmI | CTRYAG | 1 cut(s) | 1353 |
| BfoI | RGCGCY | 1 cut(s) | 1610 |
| BfuAI | ACCTGC | 2 cut(s) | 1765, 1795 |
| BglII | AGATCT | 1 cut(s) | 395 |
| BisI | GCNGC | 7 cut(s) | 258, 682, 696, 821, 1398, 1670, 1673 |
| BlnI | CCTAGG | 1 cut(s) | 1496 |
| BlpI | GCTNAGC | 1 cut(s) | 714 |
| BlsI | GCNGC | 7 cut(s) | 259, 683, 697, 822, 1399, 1671, 1674 |
| Bme1390I | CCNGG | 5 cut(s) | 115, 551, 552, 1341, 1820 |
| Bme18I | GGWCC | 1 cut(s) | 1298 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1377 |
| BmeT110I | CYCGRG | 2 cut(s) | 127, 550 |
| BmgBI | CACGTC | 1 cut(s) | 526 |
| BmgT120I | GGNCC | 3 cut(s) | 247, 1260, 1298 |
| BmiI | GGNNCC | 4 cut(s) | 297, 536, 1060, 1809 |
| BmrFI | CCNGG | 5 cut(s) | 115, 551, 552, 1341, 1820 |
| BmsI | GCATC | 2 cut(s) | 991, 1893 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1003, 1035 |
| Bpu10I | CCTNAGC | 1 cut(s) | 585 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 714 |
| BpuEI | CTTGAG | 2 cut(s) | 161, 1061 |
| BpuMI | CCSGG | 3 cut(s) | 115, 551, 552 |
| BsaAI | YACGTR | 1 cut(s) | 328 |
| BsaHI | GRCGYC | 1 cut(s) | 1378 |
| BsaJI | CCNNGG | 5 cut(s) | 549, 550, 927, 1479, 1496 |
| BsaWI | WCCGGW | 1 cut(s) | 1452 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 554, 1340, 1497 |
| Bse118I | RCCGGY | 1 cut(s) | 1452 |
| Bse1I | ACTGG | 4 cut(s) | 1103, 1414, 1491, 1740 |
| Bse3DI | GCAATG | 2 cut(s) | 1632, 1863 |
| BseBI | CCWGG | 2 cut(s) | 1341, 1820 |
| BseDI | CCNNGG | 5 cut(s) | 549, 550, 927, 1479, 1496 |
| BseGI | GGATG | 4 cut(s) | 100, 658, 1908, 1919 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 554, 1340, 1497 |
| BseMI | GCAATG | 2 cut(s) | 1632, 1863 |
| BseMII | CTCAG | 8 cut(s) | 41, 252, 363, 557, 576, 624, 705, 1746 |
| BseNI | ACTGG | 4 cut(s) | 1103, 1414, 1491, 1740 |
| BseRI | GAGGAG | 2 cut(s) | 486, 583 |
| BseSI | GKGCMC | 1 cut(s) | 922 |
| BseXI | GCAGC | 6 cut(s) | 244, 682, 693, 832, 1384, 1681 |
| BseYI | CCCAGC | 2 cut(s) | 1335, 1793 |
| Bsh1236I | CGCG | 1 cut(s) | 783 |
| BshFI | GGCC | 6 cut(s) | 248, 926, 1038, 1261, 1646, 1753 |
| BshNI | GGYRCC | 2 cut(s) | 534, 1807 |
| BshTI | ACCGGT | 1 cut(s) | 1452 |
| BsiHKAI | GWGCWC | 4 cut(s) | 128, 177, 348, 922 |
| BsiHKCI | CYCGRG | 2 cut(s) | 127, 550 |
| BsiSI | CCGG | 3 cut(s) | 114, 551, 1453 |
| BslFI | GGGAC | 2 cut(s) | 530, 1514 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 554, 1340, 1497 |
| BsmAI | GTCTC | 2 cut(s) | 1364, 1751 |
| BsmBI | CGTCTC | 1 cut(s) | 1364 |
| BsmFI | GGGAC | 2 cut(s) | 530, 1514 |
| BsnI | GGCC | 6 cut(s) | 248, 926, 1038, 1261, 1646, 1753 |
| BsoBI | CYCGRG | 2 cut(s) | 127, 550 |
| Bsp1286I | GDGCHC | 4 cut(s) | 128, 177, 348, 922 |
| Bsp143I | GATC | 5 cut(s) | 131, 295, 395, 892, 1518 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 714 |
| Bsp68I | TCGCGA | 1 cut(s) | 783 |
| BspACI | CCGC | 3 cut(s) | 317, 856, 1672 |
| BspANI | GGCC | 6 cut(s) | 248, 926, 1038, 1261, 1646, 1753 |
| BspCNI | CTCAG | 8 cut(s) | 40, 253, 362, 558, 577, 623, 706, 1747 |
| BspFNI | CGCG | 1 cut(s) | 783 |
| BspHI | TCATGA | 2 cut(s) | 58, 1867 |
| BspLI | GGNNCC | 4 cut(s) | 297, 536, 1060, 1809 |
| BspMI | ACCTGC | 2 cut(s) | 1765, 1795 |
| BspPI | GGATC | 4 cut(s) | 139, 290, 303, 900 |
| BspT107I | GGYRCC | 2 cut(s) | 534, 1807 |
| BsrBI | CCGCTC | 1 cut(s) | 858 |
| BsrDI | GCAATG | 2 cut(s) | 1632, 1863 |
| BsrFI | RCCGGY | 1 cut(s) | 1452 |
| BsrI | ACTGG | 4 cut(s) | 1103, 1414, 1491, 1740 |
| BssAI | RCCGGY | 1 cut(s) | 1452 |
| BssECI | CCNNGG | 5 cut(s) | 549, 550, 927, 1479, 1496 |
| BssMI | GATC | 5 cut(s) | 131, 295, 395, 892, 1518 |
| BssNAI | GTATAC | 1 cut(s) | 1094 |
| BssNI | GRCGYC | 1 cut(s) | 1378 |
| BssSI | CACGAG | 1 cut(s) | 1656 |
| BssT1I | CCWWGG | 1 cut(s) | 1496 |
| Bst1107I | GTATAC | 1 cut(s) | 1094 |
| Bst2BI | CACGAG | 1 cut(s) | 1656 |
| Bst2UI | CCWGG | 2 cut(s) | 1341, 1820 |
| Bst4CI | ACNGT | 5 cut(s) | 164, 242, 1435, 1480, 1596 |
| Bst6I | CTCTTC | 5 cut(s) | 198, 327, 991, 1362, 1826 |
| BstACI | GRCGYC | 1 cut(s) | 1378 |
| BstBAI | YACGTR | 1 cut(s) | 328 |
| BstC8I | GCNNGC | 3 cut(s) | 686, 1048, 1448 |
| BstDEI | CTNAG | 9 cut(s) | 27, 261, 349, 566, 585, 610, 714, 1755, 1959 |
| BstDSI | CCRYGG | 2 cut(s) | 927, 1479 |
| BstEII | GGTNACC | 1 cut(s) | 1486 |
| BstF5I | GGATG | 4 cut(s) | 100, 658, 1908, 1919 |
| BstFNI | CGCG | 1 cut(s) | 783 |
| BstH2I | RGCGCY | 1 cut(s) | 1610 |
| BstHHI | GCGC | 1 cut(s) | 1609 |
| BstKTI | GATC | 5 cut(s) | 134, 298, 398, 895, 1521 |
| BstMAI | GTCTC | 2 cut(s) | 1364, 1751 |
| BstMBI | GATC | 5 cut(s) | 131, 295, 395, 892, 1518 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 254, 829, 1052, 1208, 1336 |
| BstNI | CCWGG | 2 cut(s) | 1341, 1820 |
| BstNSI | RCATGY | 3 cut(s) | 232, 1165, 1450 |
| BstPI | GGTNACC | 1 cut(s) | 1486 |
| BstSCI | CCNGG | 5 cut(s) | 113, 549, 550, 1339, 1818 |
| BstSFI | CTRYAG | 1 cut(s) | 1353 |
| BstSLI | GKGCMC | 1 cut(s) | 922 |
| BstUI | CGCG | 1 cut(s) | 783 |
| BstV1I | GCAGC | 6 cut(s) | 244, 682, 693, 832, 1384, 1681 |
| BstX2I | RGATCY | 3 cut(s) | 295, 395, 892 |
| BstYI | RGATCY | 3 cut(s) | 295, 395, 892 |
| BstZ17I | GTATAC | 1 cut(s) | 1094 |
| BsuRI | GGCC | 6 cut(s) | 248, 926, 1038, 1261, 1646, 1753 |
| BtgI | CCRYGG | 2 cut(s) | 927, 1479 |
| BtrI | CACGTC | 1 cut(s) | 526 |
| BtsCI | GGATG | 4 cut(s) | 100, 658, 1908, 1919 |
| BtsI | GCAGTG | 2 cut(s) | 805, 1775 |
| BtsIMutI | CAGTG | 3 cut(s) | 563, 805, 1775 |
| BtuMI | TCGCGA | 1 cut(s) | 783 |
| BveI | ACCTGC | 2 cut(s) | 1765, 1795 |
| Cac8I | GCNNGC | 3 cut(s) | 686, 1048, 1448 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1109, 1675 |
| CciI | TCATGA | 2 cut(s) | 58, 1867 |
| CfoI | GCGC | 1 cut(s) | 1609 |
| Cfr10I | RCCGGY | 1 cut(s) | 1452 |
| Cfr13I | GGNCC | 3 cut(s) | 247, 1260, 1298 |
| Cfr9I | CCCGGG | 1 cut(s) | 550 |
| CseI | GACGC | 2 cut(s) | 719, 1367 |
| Csp6I | GTAC | 4 cut(s) | 181, 331, 535, 1423 |
| CspAI | ACCGGT | 1 cut(s) | 1452 |
| CviAII | CATG | 7 cut(s) | 59, 229, 752, 767, 1162, 1447, 1868 |
| CviQI | GTAC | 4 cut(s) | 181, 331, 535, 1423 |
| DdeI | CTNAG | 9 cut(s) | 27, 261, 349, 566, 585, 610, 714, 1755, 1959 |
| DpnI | GATC | 5 cut(s) | 133, 297, 397, 894, 1520 |
| DpnII | GATC | 5 cut(s) | 131, 295, 395, 892, 1518 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1377 |
| Eam1104I | CTCTTC | 5 cut(s) | 198, 327, 991, 1362, 1826 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1377 |
| EarI | CTCTTC | 5 cut(s) | 198, 327, 991, 1362, 1826 |
| Ecl136II | GAGCTC | 1 cut(s) | 126 |
| Eco130I | CCWWGG | 1 cut(s) | 1496 |
| Eco147I | AGGCCT | 1 cut(s) | 1753 |
| Eco24I | GRGCYC | 1 cut(s) | 128 |
| Eco47I | GGWCC | 1 cut(s) | 1298 |
| Eco53kI | GAGCTC | 1 cut(s) | 126 |
| Eco57I | CTGAAG | 4 cut(s) | 411, 986, 1871, 1892 |
| Eco72I | CACGTG | 1 cut(s) | 328 |
| Eco88I | CYCGRG | 2 cut(s) | 127, 550 |
| Eco91I | GGTNACC | 1 cut(s) | 1486 |
| EcoICRI | GAGCTC | 1 cut(s) | 126 |
| EcoO65I | GGTNACC | 1 cut(s) | 1486 |
| EcoRII | CCWGG | 2 cut(s) | 1339, 1818 |
| EcoT14I | CCWWGG | 1 cut(s) | 1496 |
| EcoT38I | GRGCYC | 1 cut(s) | 128 |
| ErhI | CCWWGG | 1 cut(s) | 1496 |
| Esp3I | CGTCTC | 1 cut(s) | 1364 |
| FaeI | CATG | 7 cut(s) | 62, 232, 755, 770, 1165, 1450, 1871 |
| FaqI | GGGAC | 2 cut(s) | 530, 1514 |
| FatI | CATG | 7 cut(s) | 58, 228, 751, 766, 1161, 1446, 1867 |
| FauI | CCCGC | 1 cut(s) | 863 |
| FauNDI | CATATG | 1 cut(s) | 1246 |
| FbaI | TGATCA | 1 cut(s) | 1518 |
| FblI | GTMKAC | 1 cut(s) | 1093 |
| Fnu4HI | GCNGC | 7 cut(s) | 258, 682, 696, 821, 1398, 1670, 1673 |
| FokI | GGATG | 4 cut(s) | 87, 665, 1915, 1926 |
| FriOI | GRGCYC | 1 cut(s) | 128 |
| Fsp4HI | GCNGC | 7 cut(s) | 258, 682, 696, 821, 1398, 1670, 1673 |
| FspBI | CTAG | 4 cut(s) | 393, 402, 1199, 1497 |
| GlaI | GCGC | 1 cut(s) | 1608 |
| GluI | GCNGC | 7 cut(s) | 258, 682, 696, 821, 1398, 1670, 1673 |
| GsaI | CCCAGC | 2 cut(s) | 1339, 1797 |
| HaeII | RGCGCY | 1 cut(s) | 1610 |
| HaeIII | GGCC | 6 cut(s) | 248, 926, 1038, 1261, 1646, 1753 |
| HapII | CCGG | 3 cut(s) | 114, 551, 1453 |
| HgaI | GACGC | 2 cut(s) | 719, 1367 |
| HhaI | GCGC | 1 cut(s) | 1609 |
| Hin1I | GRCGYC | 1 cut(s) | 1378 |
| Hin1II | CATG | 7 cut(s) | 62, 232, 755, 770, 1165, 1450, 1871 |
| Hin6I | GCGC | 1 cut(s) | 1607 |
| HinP1I | GCGC | 1 cut(s) | 1607 |
| HincII | GTYRAC | 2 cut(s) | 1441, 1561 |
| HindII | GTYRAC | 2 cut(s) | 1441, 1561 |
| HpaI | GTTAAC | 1 cut(s) | 1441 |
| HpaII | CCGG | 3 cut(s) | 114, 551, 1453 |
| HphI | GGTGA | 4 cut(s) | 716, 1010, 1498, 1569 |
| Hpy166II | GTNNAC | 7 cut(s) | 331, 920, 959, 1094, 1298, 1441, 1561 |
| Hpy188I | TCNGA | 6 cut(s) | 30, 136, 352, 430, 1285, 1523 |
| Hpy188III | TCNNGA | 9 cut(s) | 59, 129, 393, 782, 1535, 1658, 1828, 1868, 1948 |
| Hpy8I | GTNNAC | 7 cut(s) | 331, 920, 959, 1094, 1298, 1441, 1561 |
| Hpy99I | CGWCG | 2 cut(s) | 713, 1383 |
| HpyAV | CCTTC | 8 cut(s) | 92, 286, 312, 619, 665, 1591, 1724, 1846 |
| HpyCH4III | ACNGT | 5 cut(s) | 164, 242, 1435, 1480, 1596 |
| HpyCH4IV | ACGT | 2 cut(s) | 327, 525 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 254, 829, 1052, 1208, 1336 |
| HpyF3I | CTNAG | 9 cut(s) | 27, 261, 349, 566, 585, 610, 714, 1755, 1959 |
| HpySE526I | ACGT | 2 cut(s) | 327, 525 |
| Hsp92I | GRCGYC | 1 cut(s) | 1378 |
| Hsp92II | CATG | 7 cut(s) | 62, 232, 755, 770, 1165, 1450, 1871 |
| HspAI | GCGC | 1 cut(s) | 1607 |
| KpnI | GGTACC | 1 cut(s) | 538 |
| Ksp22I | TGATCA | 1 cut(s) | 1518 |
| KspAI | GTTAAC | 1 cut(s) | 1441 |
| Kzo9I | GATC | 5 cut(s) | 131, 295, 395, 892, 1518 |
| Lsp1109I | GCAGC | 6 cut(s) | 244, 682, 693, 832, 1384, 1681 |
| LweI | GCATC | 2 cut(s) | 991, 1893 |
| MaeI | CTAG | 4 cut(s) | 393, 402, 1199, 1497 |
| MaeII | ACGT | 2 cut(s) | 327, 525 |
| MaeIII | GTNAC | 5 cut(s) | 158, 704, 1164, 1486, 1588 |
| MalI | GATC | 5 cut(s) | 133, 297, 397, 894, 1520 |
| MbiI | CCGCTC | 1 cut(s) | 858 |
| MboI | GATC | 5 cut(s) | 131, 295, 395, 892, 1518 |
| MfeI | CAATTG | 1 cut(s) | 1323 |
| MflI | RGATCY | 3 cut(s) | 295, 395, 892 |
| MhlI | GDGCHC | 4 cut(s) | 128, 177, 348, 922 |
| MluCI | AATT | 7 cut(s) | 453, 463, 574, 1188, 1323, 1527, 1573 |
| MlyI | GAGTC | 3 cut(s) | 19, 404, 1563 |
| MmeI | TCCRAC | 4 cut(s) | 110, 128, 1203, 1297 |
| MseI | TTAA | 8 cut(s) | 285, 1118, 1140, 1194, 1407, 1440, 1457, 1530 |
| MslI | CAYNNNNRTG | 3 cut(s) | 351, 524, 765 |
| MspA1I | CMGCKG | 2 cut(s) | 695, 1672 |
| MspI | CCGG | 3 cut(s) | 114, 551, 1453 |
| MspR9I | CCNGG | 5 cut(s) | 115, 551, 552, 1341, 1820 |
| MunI | CAATTG | 1 cut(s) | 1323 |
| MvaI | CCWGG | 2 cut(s) | 1341, 1820 |
| MvnI | CGCG | 1 cut(s) | 783 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 254, 829, 1052, 1208, 1336 |
| NciI | CCSGG | 3 cut(s) | 115, 551, 552 |
| NdeI | CATATG | 1 cut(s) | 1246 |
| NdeII | GATC | 5 cut(s) | 131, 295, 395, 892, 1518 |
| NlaIII | CATG | 7 cut(s) | 62, 232, 755, 770, 1165, 1450, 1871 |
| NlaIV | GGNNCC | 4 cut(s) | 297, 536, 1060, 1809 |
| NmuCI | GTSAC | 4 cut(s) | 158, 704, 1486, 1588 |
| NruI | TCGCGA | 1 cut(s) | 783 |
| NspI | RCATGY | 3 cut(s) | 232, 1165, 1450 |
| PaeI | GCATGC | 1 cut(s) | 1450 |
| PagI | TCATGA | 2 cut(s) | 58, 1867 |
| PaqCI | CACCTGC | 1 cut(s) | 1795 |
| PceI | AGGCCT | 1 cut(s) | 1753 |
| PciI | ACATGT | 1 cut(s) | 1161 |
| PflFI | GACNNNGTC | 1 cut(s) | 1505 |
| PinAI | ACCGGT | 1 cut(s) | 1452 |
| PkrI | GCNGC | 7 cut(s) | 259, 683, 697, 822, 1399, 1671, 1674 |
| PleI | GAGTC | 3 cut(s) | 19, 404, 1562 |
| PmaCI | CACGTG | 1 cut(s) | 328 |
| PmlI | CACGTG | 1 cut(s) | 328 |
| PpsI | GAGTC | 3 cut(s) | 19, 404, 1562 |
| Ppu21I | YACGTR | 1 cut(s) | 328 |
| PscI | ACATGT | 1 cut(s) | 1161 |
| PshBI | ATTAAT | 1 cut(s) | 1530 |
| Psp124BI | GAGCTC | 1 cut(s) | 128 |
| Psp6I | CCWGG | 2 cut(s) | 1339, 1818 |
| PspCI | CACGTG | 1 cut(s) | 328 |
| PspEI | GGTNACC | 1 cut(s) | 1486 |
| PspFI | CCCAGC | 2 cut(s) | 1335, 1793 |
| PspGI | CCWGG | 2 cut(s) | 1339, 1818 |
| PspN4I | GGNNCC | 4 cut(s) | 297, 536, 1060, 1809 |
| PspPI | GGNCC | 3 cut(s) | 247, 1260, 1298 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1109, 1675 |
| PsuI | RGATCY | 3 cut(s) | 295, 395, 892 |
| PsyI | GACNNNGTC | 1 cut(s) | 1505 |
| PvuII | CAGCTG | 1 cut(s) | 695 |
| RruI | TCGCGA | 1 cut(s) | 783 |
| RsaI | GTAC | 4 cut(s) | 182, 332, 536, 1424 |
| RsaNI | GTAC | 4 cut(s) | 181, 331, 535, 1423 |
| RseI | CAYNNNNRTG | 3 cut(s) | 351, 524, 765 |
| SacI | GAGCTC | 1 cut(s) | 128 |
| SaqAI | TTAA | 8 cut(s) | 285, 1118, 1140, 1194, 1407, 1440, 1457, 1530 |
| SatI | GCNGC | 7 cut(s) | 258, 682, 696, 821, 1398, 1670, 1673 |
| Sau3AI | GATC | 5 cut(s) | 131, 295, 395, 892, 1518 |
| Sau96I | GGNCC | 3 cut(s) | 247, 1260, 1298 |
| SchI | GAGTC | 3 cut(s) | 19, 404, 1563 |
| ScrFI | CCNGG | 5 cut(s) | 115, 551, 552, 1341, 1820 |
| SduI | GDGCHC | 4 cut(s) | 128, 177, 348, 922 |
| SfaNI | GCATC | 2 cut(s) | 991, 1893 |
| SfcI | CTRYAG | 1 cut(s) | 1353 |
| SinI | GGWCC | 1 cut(s) | 1298 |
| SmaI | CCCGGG | 1 cut(s) | 552 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 351, 524, 765 |
| SmlI | CTYRAG | 2 cut(s) | 176, 1040 |
| SmoI | CTYRAG | 2 cut(s) | 176, 1040 |
| SphI | GCATGC | 1 cut(s) | 1450 |
| Sse9I | AATT | 7 cut(s) | 453, 463, 574, 1188, 1323, 1527, 1573 |
| SseBI | AGGCCT | 1 cut(s) | 1753 |
| SsiI | CCGC | 3 cut(s) | 317, 856, 1672 |
| SspI | AATATT | 1 cut(s) | 1309 |
| SspMI | CTAG | 4 cut(s) | 393, 402, 1199, 1497 |
| SstI | GAGCTC | 1 cut(s) | 128 |
| StuI | AGGCCT | 1 cut(s) | 1753 |
| StyD4I | CCNGG | 5 cut(s) | 113, 549, 550, 1339, 1818 |
| StyI | CCWWGG | 1 cut(s) | 1496 |
| TaaI | ACNGT | 5 cut(s) | 164, 242, 1435, 1480, 1596 |
| TaiI | ACGT | 2 cut(s) | 330, 528 |
| TaqI | TCGA | 3 cut(s) | 23, 122, 420 |
| TaqII | GACCGA | 1 cut(s) | 1925 |
| TasI | AATT | 7 cut(s) | 453, 463, 574, 1188, 1323, 1527, 1573 |
| TatI | WGTACW | 2 cut(s) | 180, 1422 |
| TauI | GCSGC | 1 cut(s) | 1675 |
| Tru1I | TTAA | 8 cut(s) | 285, 1118, 1140, 1194, 1407, 1440, 1457, 1530 |
| Tru9I | TTAA | 8 cut(s) | 285, 1118, 1140, 1194, 1407, 1440, 1457, 1530 |
| TscAI | CASTG | 3 cut(s) | 570, 805, 1775 |
| TseFI | GTSAC | 4 cut(s) | 158, 704, 1486, 1588 |
| TseI | GCWGC | 6 cut(s) | 257, 681, 695, 820, 1397, 1669 |
| Tsp45I | GTSAC | 4 cut(s) | 158, 704, 1486, 1588 |
| TspDTI | ATGAA | 8 cut(s) | 17, 75, 684, 783, 1233, 1488, 1727, 1902 |
| TspGWI | ACGGA | 1 cut(s) | 1566 |
| TspMI | CCCGGG | 1 cut(s) | 550 |
| TspRI | CASTG | 3 cut(s) | 570, 805, 1775 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1505 |
| VneI | GTGCAC | 1 cut(s) | 918 |
| VpaK11BI | GGWCC | 1 cut(s) | 1298 |
| VspI | ATTAAT | 1 cut(s) | 1530 |
| XapI | RAATTY | 2 cut(s) | 463, 574 |
| XbaI | TCTAGA | 1 cut(s) | 392 |
| XceI | RCATGY | 3 cut(s) | 232, 1165, 1450 |
| XmaI | CCCGGG | 1 cut(s) | 550 |
| XmaJI | CCTAGG | 1 cut(s) | 1496 |
| XmiI | GTMKAC | 1 cut(s) | 1093 |
| XspI | CTAG | 4 cut(s) | 393, 402, 1199, 1497 |