Rorug05G0373200

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000175
Physical Location & Seq
Reverse (-)
50261225 .. 50264768
3544 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0373200.1

Sequence Viewer

Length: 1563 bp
ATGGCCAGCACAGCTCCAAGAATCCAAGCTCTTGACCTTCCATGGCTACTACTACTTTTTTTCGTCTTTTCAACCTTCATCATCAGTTCTTGTTCTTCTCCCTTGAGAAAAATACCGAGGCTCCGCATCCTACAAAGACCTATAACTTTTCGAAATCACAGCACTTCTGTTGCTGCCCGCCACCATTTCAGGACGTACTATTATGCTCAAATGCTAGACCACTTCAACTACTGGCCAGGGAGTTATGCCACCTTTCTGCAGCGTTACATGGTAAGTTCTATGCATTGGAGAGGTGCCGGTGCAGCCGCTCCTATGTTCGTGTACCTTGGTGGGGAGGAGTCCTTGGACGAAAGTATTGGCTCCATCGGATTTCTCACCGATAATGCACCGAAATTTGGTGCTTTAATGGTATATATAGAGCATCGGTACTATGGGAAATCAATTCCATCTAGACCGAACATTCAGGATATATACAATGCTACCAGCCTCGGATATCTGAACTCCGCGCAAGCTCTGGCCGATTATGCAGAAATTATACTACACTTGAAGAAGAATTTATCGGCCGATGCTTCTCCAGTAATTGTCATTGGAGGATCTTATGGGGGAATGCTTGCAGCATGGTTTCGCCTCAAATACCCGCACATTGCTGTGGGGGCATTGGCCTCTTCCGCCCCACTTCTTTACTTTGATGACATTACACCATCAGATGGGCTTCATTCCGTGGTCACAAACAATTTCAGGGAAGCGAGTGAGAAATGCTACAATACCATAAAGAAATCATGGTCTGAAATCGATAGAATTGCTGTTCACCAAGACGATGGTCTTGACATCCTCACTGAGAAATTTCAAACTTGCGAACCTTTGGAGGATGGAGATGAACTCGAGCTAAAGGCCTACTTGGAGTTCATATATATAACTGCATCTCAGTATGATGACCCTCCAACATATCCAGTCAATCAGATCTGCAACAGTATAAATGCAGCAGCAGACAGAGGAGATGATATCATTGATCGAATTGCCTCGGCTGTTAATTATACTCGTCGAGGAGAGAATAGAGGTCAATGCTTGGACCTAAGTAGCGAACTTCACCCATCAGATGATGCAGTGGATGGTTTGAACTGGTTATGGCAGGCATGTACTGAAATTTTTATGCCAATCGGTCGAGAAACGAACGAGACTATGTTCCAGGCAGAACCATTTGATGCGGATTCCTACAGTCAAAGGTGCCACCAGTTATATCAAGGTGCCCTCCCTAGACCCCATTGGATCACAACTTATTATGGGGGGCATCATATAAGGATGACCTTGGAGAGGTTTGCCAGTAACATCATTTTCTCAAATGGCCAGCGTGATCCTTTTAGCGTTGCCGGAGTATTGACAAATATATCGCCCAGCATAGTAGCCGTGACTACACGTCAAGGTTCTCATTGCTTGGACTTATTACCTGCAAGGATAAACGATCCCAGATGGTTAGTTGTGCAGCGACACATAGAAGTTGGGATTATCACAGGATGGATTCGCAACTACTACAATGATTTGCGTATCTTTTCTTCTGAGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

520

Amino Acids

58.79

Weight (kDa)

5.86

Isoelectric Point (pI)

46.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S28 PF05577 70 - 496 1.7e-81 Serine carboxypeptidase S28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000175)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1453
AccB1I GGYRCC 3 cut(s) 293, 1224, 1244
AccB7I CCANNNNNTGG 1 cut(s) 707
AccBSI CCGCTC 1 cut(s) 308
AccII CGCG 1 cut(s) 506
AciI CCGC 7 cut(s) 124, 178, 306, 504, 638, 669, 1205
AclWI GGATC 4 cut(s) 601, 1274, 1346, 1454
AcoI YGGCCR 5 cut(s) 3, 233, 516, 561, 1342
AcsI RAATTY 4 cut(s) 392, 553, 842, 1143
AfaI GTAC 4 cut(s) 197, 323, 428, 1138
AfiI CCNNNNNNNGG 4 cut(s) 331, 395, 707, 1311
AflIII ACRYGT 1 cut(s) 1412
AgsI TTSAA 5 cut(s) 72, 226, 547, 848, 1117
AhdI GACNNNNNGTC 1 cut(s) 1413
AjiI CACGTC 1 cut(s) 1415
AjnI CCWGG 2 cut(s) 235, 1185
AluBI AGCT 4 cut(s) 14, 29, 512, 886
AluI AGCT 4 cut(s) 14, 29, 512, 886
Alw26I GTCTC 1 cut(s) 1169
AlwI GGATC 4 cut(s) 601, 1274, 1346, 1454
Ama87I CYCGRG 1 cut(s) 881
AoxI GGCC 7 cut(s) 3, 233, 516, 561, 660, 891, 1342
ApeKI GCWGC 7 cut(s) 173, 259, 302, 614, 980, 983, 1480
ApoI RAATTY 4 cut(s) 392, 553, 842, 1143
AspLEI GCGC 1 cut(s) 508
AspS9I GGNCC 1 cut(s) 1069
AsuHPI GGTGA 3 cut(s) 367, 800, 1079
AsuII TTCGAA 1 cut(s) 151
AvaI CYCGRG 1 cut(s) 881
AvaII GGWCC 1 cut(s) 1069
BaeGI GKGCMC 1 cut(s) 1249
BalI TGGCCA 3 cut(s) 5, 235, 1344
BanI GGYRCC 3 cut(s) 293, 1224, 1244
BarI GAAGNNNNNNTAC 1 cut(s) 1534
BbvI GCAGC 7 cut(s) 160, 271, 314, 626, 992, 995, 1492
BceAI ACGGC 1 cut(s) 1388
BcgI CGANNNNNNTGC 2 cut(s) 782, 816
BciT130I CCWGG 2 cut(s) 237, 1187
BcoDI GTCTC 1 cut(s) 1169
BfaI CTAG 3 cut(s) 215, 450, 1254
BfmI CTRYAG 2 cut(s) 257, 1213
BfuAI ACCTGC 1 cut(s) 1453
BglII AGATCT 1 cut(s) 960
BisI GCNGC 8 cut(s) 174, 260, 303, 306, 615, 981, 984, 1481
BlsI GCNGC 8 cut(s) 175, 261, 304, 307, 616, 982, 985, 1482
Bme1390I CCNGG 2 cut(s) 237, 1187
Bme18I GGWCC 1 cut(s) 1069
BmeRI GACNNNNNGTC 1 cut(s) 1413
BmeT110I CYCGRG 1 cut(s) 881
BmgBI CACGTC 1 cut(s) 1415
BmgT120I GGNCC 1 cut(s) 1069
BmiI GGNNCC 5 cut(s) 122, 295, 361, 1226, 1246
BmrFI CCNGG 2 cut(s) 237, 1187
BmsI GCATC 7 cut(s) 135, 430, 556, 929, 1090, 1192, 1297
BoxI GACNNNNGTC 1 cut(s) 819
BplI GAGNNNNNCTC 2 cut(s) 864, 896
BpmI CTGGAG 1 cut(s) 558
Bpu14I TTCGAA 1 cut(s) 151
BpuEI CTTGAG 1 cut(s) 124
Bsa29I ATCGAT 1 cut(s) 792
BsaJI CCNNGG 9 cut(s) 41, 116, 236, 325, 342, 487, 720, 1020, 1305
BsaXI ACNNNNNCTCC 2 cut(s) 105, 135
Bsc4I CCNNNNNNNGG 4 cut(s) 331, 395, 707, 1311
Bse118I RCCGGY 1 cut(s) 296
Bse1I ACTGG 6 cut(s) 236, 575, 950, 1124, 1231, 1320
Bse3DI GCAATG 2 cut(s) 642, 1426
BseBI CCWGG 2 cut(s) 237, 1187
BseCI ATCGAT 1 cut(s) 792
BseDI CCNNGG 9 cut(s) 41, 116, 236, 325, 342, 487, 720, 1020, 1305
BseGI GGATG 6 cut(s) 126, 828, 874, 1114, 1305, 1517
BseLI CCNNNNNNNGG 4 cut(s) 331, 395, 707, 1311
BseMI GCAATG 2 cut(s) 642, 1426
BseMII CTCAG 3 cut(s) 828, 938, 1545
BseNI ACTGG 6 cut(s) 236, 575, 950, 1124, 1231, 1320
BseRI GAGGAG 3 cut(s) 350, 1008, 1059
BseSI GKGCMC 1 cut(s) 1249
BseX3I CGGCCG 1 cut(s) 561
BseXI GCAGC 7 cut(s) 160, 271, 314, 626, 992, 995, 1492
BseYI CCCAGC 1 cut(s) 1391
BsgI GTGCAG 2 cut(s) 321, 1499
Bsh1236I CGCG 1 cut(s) 506
Bsh1285I CGRYCG 2 cut(s) 564, 1162
BshFI GGCC 7 cut(s) 5, 235, 518, 563, 662, 893, 1344
BshNI GGYRCC 3 cut(s) 293, 1224, 1244
BshVI ATCGAT 1 cut(s) 792
BsiEI CGRYCG 2 cut(s) 564, 1162
BsiHKCI CYCGRG 1 cut(s) 881
BsiSI CCGG 2 cut(s) 297, 1368
BslI CCNNNNNNNGG 4 cut(s) 331, 395, 707, 1311
BsmAI GTCTC 1 cut(s) 1169
BsmI GAATGC 1 cut(s) 612
BsnI GGCC 7 cut(s) 5, 235, 518, 563, 662, 893, 1344
BsoBI CYCGRG 1 cut(s) 881
Bsp119I TTCGAA 1 cut(s) 151
Bsp1286I GDGCHC 1 cut(s) 1249
Bsp143I GATC 6 cut(s) 593, 960, 1009, 1266, 1351, 1459
Bsp19I CCATGG 1 cut(s) 41
BspACI CCGC 7 cut(s) 124, 178, 306, 504, 638, 669, 1205
BspANI GGCC 7 cut(s) 5, 235, 518, 563, 662, 893, 1344
BspCNI CTCAG 3 cut(s) 829, 937, 1546
BspDI ATCGAT 1 cut(s) 792
BspFNI CGCG 1 cut(s) 506
BspLI GGNNCC 5 cut(s) 122, 295, 361, 1226, 1246
BspMAI CTGCAG 1 cut(s) 261
BspMI ACCTGC 1 cut(s) 1453
BspPI GGATC 4 cut(s) 601, 1274, 1346, 1454
BspT104I TTCGAA 1 cut(s) 151
BspT107I GGYRCC 3 cut(s) 293, 1224, 1244
BsrBI CCGCTC 1 cut(s) 308
BsrDI GCAATG 2 cut(s) 642, 1426
BsrFI RCCGGY 1 cut(s) 296
BsrI ACTGG 6 cut(s) 236, 575, 950, 1124, 1231, 1320
BssAI RCCGGY 1 cut(s) 296
BssECI CCNNGG 9 cut(s) 41, 116, 236, 325, 342, 487, 720, 1020, 1305
BssMI GATC 6 cut(s) 593, 960, 1009, 1266, 1351, 1459
BssT1I CCWWGG 4 cut(s) 41, 325, 342, 1305
Bst2UI CCWGG 2 cut(s) 237, 1187
Bst4CI ACNGT 2 cut(s) 971, 1217
Bst6I CTCTTC 1 cut(s) 670
BstBI TTCGAA 1 cut(s) 151
BstC8I GCNNGC 6 cut(s) 7, 178, 510, 612, 1131, 1346
BstDEI CTNAG 4 cut(s) 837, 924, 1073, 1554
BstDSI CCRYGG 2 cut(s) 41, 720
BstENI CCTNNNNNAGG 1 cut(s) 1309
BstF5I GGATG 6 cut(s) 126, 828, 874, 1114, 1305, 1517
BstFNI CGCG 1 cut(s) 506
BstHHI GCGC 1 cut(s) 508
BstKTI GATC 6 cut(s) 596, 963, 1012, 1269, 1354, 1462
BstMAI GTCTC 1 cut(s) 1169
BstMBI GATC 6 cut(s) 593, 960, 1009, 1266, 1351, 1459
BstMCI CGRYCG 2 cut(s) 564, 1162
BstMWI GCNNNNNNNGC 5 cut(s) 11, 302, 524, 653, 668
BstNI CCWGG 2 cut(s) 237, 1187
BstNSI RCATGY 1 cut(s) 1137
BstPAI GACNNNNGTC 1 cut(s) 819
BstSCI CCNGG 2 cut(s) 235, 1185
BstSFI CTRYAG 2 cut(s) 257, 1213
BstSLI GKGCMC 1 cut(s) 1249
BstUI CGCG 1 cut(s) 506
BstV1I GCAGC 7 cut(s) 160, 271, 314, 626, 992, 995, 1492
BstX2I RGATCY 2 cut(s) 593, 960
BstXI CCANNNNNNTGG 1 cut(s) 818
BstYI RGATCY 2 cut(s) 593, 960
BstZI CGGCCG 1 cut(s) 561
Bsu15I ATCGAT 1 cut(s) 792
BsuRI GGCC 7 cut(s) 5, 235, 518, 563, 662, 893, 1344
BsuTUI ATCGAT 1 cut(s) 792
BtgI CCRYGG 2 cut(s) 41, 720
BtrI CACGTC 1 cut(s) 1415
BtsCI GGATG 6 cut(s) 126, 828, 874, 1114, 1305, 1517
BtsI GCAGTG 1 cut(s) 1110
BtsIMutI CAGTG 2 cut(s) 834, 1110
BveI ACCTGC 1 cut(s) 1453
Cac8I GCNNGC 6 cut(s) 7, 178, 510, 612, 1131, 1346
CfoI GCGC 1 cut(s) 508
Cfr10I RCCGGY 1 cut(s) 296
Cfr13I GGNCC 1 cut(s) 1069
ClaI ATCGAT 1 cut(s) 792
Csp6I GTAC 4 cut(s) 196, 322, 427, 1137
CviAII CATG 5 cut(s) 42, 268, 618, 780, 1134
CviQI GTAC 4 cut(s) 196, 322, 427, 1137
DdeI CTNAG 4 cut(s) 837, 924, 1073, 1554
DpnI GATC 6 cut(s) 595, 962, 1011, 1268, 1353, 1461
DpnII GATC 6 cut(s) 593, 960, 1009, 1266, 1351, 1459
DriI GACNNNNNGTC 1 cut(s) 1413
EaeI YGGCCR 5 cut(s) 3, 233, 516, 561, 1342
EagI CGGCCG 1 cut(s) 561
Eam1104I CTCTTC 1 cut(s) 670
Eam1105I GACNNNNNGTC 1 cut(s) 1413
EarI CTCTTC 1 cut(s) 670
EciI GGCGGA 1 cut(s) 658
EclXI CGGCCG 1 cut(s) 561
Eco130I CCWWGG 4 cut(s) 41, 325, 342, 1305
Eco147I AGGCCT 1 cut(s) 893
Eco32I GATATC 2 cut(s) 494, 1003
Eco47I GGWCC 1 cut(s) 1069
Eco52I CGGCCG 1 cut(s) 561
Eco88I CYCGRG 1 cut(s) 881
EcoNI CCTNNNNNAGG 1 cut(s) 1309
EcoRII CCWGG 2 cut(s) 235, 1185
EcoRV GATATC 2 cut(s) 494, 1003
EcoT14I CCWWGG 4 cut(s) 41, 325, 342, 1305
EcoT22I ATGCAT 1 cut(s) 285
ErhI CCWWGG 4 cut(s) 41, 325, 342, 1305
FaeI CATG 5 cut(s) 45, 271, 621, 783, 1137
FalI AAGNNNNNCTT 2 cut(s) 881, 913
FatI CATG 5 cut(s) 41, 267, 617, 779, 1133
FauI CCCGC 2 cut(s) 185, 645
Fnu4HI GCNGC 8 cut(s) 174, 260, 303, 306, 615, 981, 984, 1481
FokI GGATG 6 cut(s) 113, 815, 881, 1121, 1312, 1524
Fsp4HI GCNGC 8 cut(s) 174, 260, 303, 306, 615, 981, 984, 1481
FspBI CTAG 3 cut(s) 215, 450, 1254
GlaI GCGC 1 cut(s) 507
GluI GCNGC 8 cut(s) 174, 260, 303, 306, 615, 981, 984, 1481
GsaI CCCAGC 1 cut(s) 1395
GsuI CTGGAG 1 cut(s) 558
HaeIII GGCC 7 cut(s) 5, 235, 518, 563, 662, 893, 1344
HapII CCGG 2 cut(s) 297, 1368
HhaI GCGC 1 cut(s) 508
Hin1II CATG 5 cut(s) 45, 271, 621, 783, 1137
Hin6I GCGC 1 cut(s) 506
HinP1I GCGC 1 cut(s) 506
HinfI GANTC 4 cut(s) 21, 338, 1208, 1516
HpaII CCGG 2 cut(s) 297, 1368
HphI GGTGA 3 cut(s) 367, 800, 1079
Hpy166II GTNNAC 2 cut(s) 322, 808
Hpy188I TCNGA 8 cut(s) 368, 491, 498, 706, 787, 960, 1096, 1555
Hpy188III TCNNGA 6 cut(s) 32, 190, 450, 464, 824, 1163
Hpy8I GTNNAC 2 cut(s) 322, 808
Hpy99I CGWCG 1 cut(s) 1044
HpyAV CCTTC 2 cut(s) 47, 85
HpyCH4III ACNGT 2 cut(s) 971, 1217
HpyCH4IV ACGT 2 cut(s) 194, 1414
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 302, 524, 653, 668
HpyF3I CTNAG 4 cut(s) 837, 924, 1073, 1554
HpySE526I ACGT 2 cut(s) 194, 1414
Hsp92II CATG 5 cut(s) 45, 271, 621, 783, 1137
HspAI GCGC 1 cut(s) 506
Kzo9I GATC 6 cut(s) 593, 960, 1009, 1266, 1351, 1459
LmnI GCTCC 4 cut(s) 19, 126, 313, 365
Lsp1109I GCAGC 7 cut(s) 160, 271, 314, 626, 992, 995, 1492
LweI GCATC 7 cut(s) 135, 430, 556, 929, 1090, 1192, 1297
MaeI CTAG 3 cut(s) 215, 450, 1254
MaeII ACGT 2 cut(s) 194, 1414
MaeIII GTNAC 4 cut(s) 263, 724, 1322, 1405
MalI GATC 6 cut(s) 595, 962, 1011, 1268, 1353, 1461
MbiI CCGCTC 1 cut(s) 308
MboI GATC 6 cut(s) 593, 960, 1009, 1266, 1351, 1459
MboII GAAGA 5 cut(s) 87, 559, 562, 657, 1542
MflI RGATCY 2 cut(s) 593, 960
MhlI GDGCHC 1 cut(s) 1249
MlsI TGGCCA 3 cut(s) 5, 235, 1344
MluNI TGGCCA 3 cut(s) 5, 235, 1344
MlyI GAGTC 1 cut(s) 347
MmeI TCCRAC 1 cut(s) 965
Mox20I TGGCCA 3 cut(s) 5, 235, 1344
Mph1103I ATGCAT 1 cut(s) 285
MscI TGGCCA 3 cut(s) 5, 235, 1344
MseI TTAA 2 cut(s) 404, 1029
MslI CAYNNNNRTG 1 cut(s) 647
Msp20I TGGCCA 3 cut(s) 5, 235, 1344
MspI CCGG 2 cut(s) 297, 1368
MspR9I CCNGG 2 cut(s) 237, 1187
Mva1269I GAATGC 1 cut(s) 612
MvaI CCWGG 2 cut(s) 237, 1187
MvnI CGCG 1 cut(s) 506
MwoI GCNNNNNNNGC 5 cut(s) 11, 302, 524, 653, 668
NcoI CCATGG 1 cut(s) 41
NdeII GATC 6 cut(s) 593, 960, 1009, 1266, 1351, 1459
NlaIII CATG 5 cut(s) 45, 271, 621, 783, 1137
NlaIV GGNNCC 5 cut(s) 122, 295, 361, 1226, 1246
NmeAIII GCCGAG 1 cut(s) 1001
NmuCI GTSAC 2 cut(s) 724, 1405
NsiI ATGCAT 1 cut(s) 285
NspI RCATGY 1 cut(s) 1137
NspV TTCGAA 1 cut(s) 151
PaeR7I CTCGAG 1 cut(s) 881
PceI AGGCCT 1 cut(s) 893
PctI GAATGC 1 cut(s) 612
PfeI GAWTC 3 cut(s) 21, 1208, 1516
PflMI CCANNNNNTGG 1 cut(s) 707
PkrI GCNGC 8 cut(s) 175, 261, 304, 307, 616, 982, 985, 1482
PleI GAGTC 1 cut(s) 346
PpsI GAGTC 1 cut(s) 346
PshAI GACNNNNGTC 1 cut(s) 819
Psp6I CCWGG 2 cut(s) 235, 1185
PspFI CCCAGC 1 cut(s) 1391
PspGI CCWGG 2 cut(s) 235, 1185
PspN4I GGNNCC 5 cut(s) 122, 295, 361, 1226, 1246
PspPI GGNCC 1 cut(s) 1069
PspXI VCTCGAGB 1 cut(s) 881
PstI CTGCAG 1 cut(s) 261
PsuI RGATCY 2 cut(s) 593, 960
RsaI GTAC 4 cut(s) 197, 323, 428, 1138
RsaNI GTAC 4 cut(s) 196, 322, 427, 1137
RseI CAYNNNNRTG 1 cut(s) 647
SaqAI TTAA 2 cut(s) 404, 1029
SatI GCNGC 8 cut(s) 174, 260, 303, 306, 615, 981, 984, 1481
Sau3AI GATC 6 cut(s) 593, 960, 1009, 1266, 1351, 1459
Sau96I GGNCC 1 cut(s) 1069
SchI GAGTC 1 cut(s) 347
ScrFI CCNGG 2 cut(s) 237, 1187
SduI GDGCHC 1 cut(s) 1249
SfaNI GCATC 7 cut(s) 135, 430, 556, 929, 1090, 1192, 1297
SfcI CTRYAG 2 cut(s) 257, 1213
Sfr274I CTCGAG 1 cut(s) 881
SfuI TTCGAA 1 cut(s) 151
SinI GGWCC 1 cut(s) 1069
SlaI CTCGAG 1 cut(s) 881
SmiMI CAYNNNNRTG 1 cut(s) 647
SmlI CTYRAG 2 cut(s) 103, 881
SmoI CTYRAG 2 cut(s) 103, 881
SseBI AGGCCT 1 cut(s) 893
SsiI CCGC 7 cut(s) 124, 178, 306, 504, 638, 669, 1205
SspMI CTAG 3 cut(s) 215, 450, 1254
StuI AGGCCT 1 cut(s) 893
StyD4I CCNGG 2 cut(s) 235, 1185
StyI CCWWGG 4 cut(s) 41, 325, 342, 1305
TaaI ACNGT 2 cut(s) 971, 1217
TaiI ACGT 2 cut(s) 197, 1417
TaqI TCGA 6 cut(s) 151, 792, 882, 1012, 1042, 1162
TaqII GACCGA 2 cut(s) 469, 1148
TatI WGTACW 1 cut(s) 1136
TauI GCSGC 1 cut(s) 308
TfiI GAWTC 3 cut(s) 21, 1208, 1516
Tru1I TTAA 2 cut(s) 404, 1029
Tru9I TTAA 2 cut(s) 404, 1029
TscAI CASTG 2 cut(s) 841, 1110
TseFI GTSAC 2 cut(s) 724, 1405
TseI GCWGC 7 cut(s) 173, 259, 302, 614, 980, 983, 1480
Tsp45I GTSAC 2 cut(s) 724, 1405
TspDTI ATGAA 4 cut(s) 67, 704, 891, 895
TspGWI ACGGA 1 cut(s) 709
TspRI CASTG 2 cut(s) 841, 1110
Van91I CCANNNNNTGG 1 cut(s) 707
VpaK11BI GGWCC 1 cut(s) 1069
XagI CCTNNNNNAGG 1 cut(s) 1309
XapI RAATTY 4 cut(s) 392, 553, 842, 1143
XbaI TCTAGA 1 cut(s) 449
XceI RCATGY 1 cut(s) 1137
XhoI CTCGAG 1 cut(s) 881
XspI CTAG 3 cut(s) 215, 450, 1254
Zsp2I ATGCAT 1 cut(s) 285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.