Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000175

Physical Location & Seq

Genomic Coordinates Reverse (-)

71607025 .. 71608779

Gene Structure 1755 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34148

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGAAGTCCTGGAAGACGAGAGCTGCACGCTGCAGGACTATTTGGCGGTCCAAGCTGCTGAAAAATCTTTCTAGCTATGATGTCCTTAATCCGAATGATCCTCATTCACCCAACAAGGCTTCTCTTGGTGAATCATTTTCAGATACTCTTTTGGTTTCAGATTCACTTTTTGAGAGGCAGAGTCTTGGAAATTTCGAAAATGTTGGGGAGGCAAACAAGTTCTTTCCTAATGGGGAATTCGATATCATTGACAAGGAGAGGTACGAATTACTGTCTGTAGCACGTTCTCACTTGGTGAAAGGGAATCTGGCATCCGATAAAAAAAATGATGTAAAGAACCCAACAGATGGTATGAAGGGAAAGAAAAATCATCACAGAGAGGATGGAGATTATCCAGAGGAAGGGAGAAGCAGCAAGCAGTCAGTTGTTTCTGCTGATGACTCTGAGCCTCAAGAAATGTTTGATAAGGTGTTACTCTGTCAAGCTGAGCATCATCATCGGGAGTGGGAATCTTGTACGCCTCATTGCTCTATGAAAAGGGAGGAAACAGAGCAGTTGCAGCAAAACAGGCAGCCTAAAGGATCTAAAACAAATCGTTCAAAGAGACAAAATAAAGATGAGGAAGGAGTAGATTTGACCACCATGCTAAATCAATGTGCACAAGCCGTGGCAAGCTATGAACAAGGAACGGCGAGTGAACTACTGAAGAAGATAAGGCAGCACTCCTCCCCCCATGGACATGCAACTCAGAGATTAGCTCACTACTTTGCCAATGGCCTAGAGGCGCGACTTACTGGTGTCGGAACCCCATCATTTTCACCTCTCTTTAGTAGGCAGACATCAGCCGCTGAATACTTACTAGCTTACCAGGTATATACTACTTCATGCCCTTTCAAGATGATGTCACAATTATTTGCCAACAGAACAATCATGAAGCTAGCAAAAAATGAAACAAGGCTTCACATTATTGATTTTGGTATTTCTTATGGTTTCCAATGGCCCTTCCTTATCCAACATCTCTCCGAGAGACCGAATGGACCTCCCAAGTTACACATCACAGGAATTGAGCTTCCGCAACGTGGTTTTCGACCTAGAGAAAGGGTTGAAGAGACCGGGCATCGCCTAGCAAGGTATTGTGCGAAGTTCAATGTCCCGTTTGAGTACGATGTCATTGCTCAAGGATGGGAAACCATACAATGTGAGGATCTTAAAATTGACCGAAACGAACTGGTAGTGGTCAATTGTCTGAACCGGTTAAAGCACATACATGATGAGACGGTGATGGAGAACTCTCCGAGAGATGCCGTCCTGAAGTTGATCAAGAATATAAACCCCAACCTTTTCATTCATGGGATCATCAATGGGACACACAATACACCCTTCTTTGCTACACGGTTCAAAGAGGCACTCTTGCATTACTATGCCCTCTTTGATATGTTTGAAGCTACTGTTCCTCGTGAAGATGAACGGCGGATGATTATCGAGAGAGAAAAATGTGGTAGAGACATAATGAATATCGTAGCATGCGAGGGAGTGGAAAGGTTTGAAAGACCTGAGACATATAAGAAATGGCAGATCAGGAATGTGAGGGCTGGGTTGAAGCAGCTCCCGTTGGACCAGGAGGAGTTGAAGAAAGTGAAGAACTTGTATAAGGGTTATCATAATGATTTTAGAGTTGAAGAAGATGGGCAGTGGATACTGCAGGGATGGAAAGGAAGGATCCTCCGCGCTCTTTCACTTTGGACTCCTGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

584

Amino Acids

67.55

Weight (kDa)

8.67

Isoelectric Point (pI)

45.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	213 - 582	4.9e-118	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000175)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca	FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica	MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica	Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis	pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis	RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata	RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora	Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa	Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha	Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana	Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	347
AccII	CGCG	2 cut(s)	787, 1728
AciI	CCGC	5 cut(s)	46, 846, 1073, 1471, 1726
AclWI	GGATC	6 cut(s)	92, 589, 1212, 1361, 1714, 1727
AcsI	RAATTY	2 cut(s)	190, 236
AcuI	CTGAAG	2 cut(s)	725, 1331
AdeI	CACNNNGTG	1 cut(s)	295
AfaI	GTAC	3 cut(s)	263, 517, 1163
AfiI	CCNNNNNNNGG	3 cut(s)	347, 401, 1079
AgeI	ACCGGT	1 cut(s)	1251
AjnI	CCWGG	3 cut(s)	8, 867, 1617
Alw21I	GWGCWC	1 cut(s)	661
Alw26I	GTCTC	6 cut(s)	598, 1021, 1103, 1268, 1497, 1550
Alw44I	GTGCAC	1 cut(s)	657
AlwI	GGATC	6 cut(s)	92, 589, 1212, 1361, 1714, 1727
AlwNI	CAGNNNCTG	1 cut(s)	848
AoxI	GGCC	2 cut(s)	775, 998
ApaLI	GTGCAC	1 cut(s)	657
ApeKI	GCWGC	8 cut(s)	23, 30, 55, 411, 559, 571, 718, 1603
ApoI	RAATTY	2 cut(s)	190, 236
AsiGI	ACCGGT	1 cut(s)	1251
AspLEI	GCGC	2 cut(s)	787, 1730
AspS9I	GGNCC	4 cut(s)	48, 999, 1037, 1615
AsuC2I	CCSGG	1 cut(s)	1114
AsuHPI	GGTGA	5 cut(s)	99, 140, 307, 810, 1291
AsuII	TTCGAA	1 cut(s)	195
AsuNHI	GCTAGC	1 cut(s)	937
AvaII	GGWCC	3 cut(s)	48, 1037, 1615
BaeGI	GKGCMC	1 cut(s)	661
BamHI	GGATCC	1 cut(s)	1719
BauI	CACGAG	1 cut(s)	1455
BbsI	GAAGAC	1 cut(s)	20
Bbv12I	GWGCWC	1 cut(s)	661
BbvI	GCAGC	8 cut(s)	10, 17, 42, 423, 571, 583, 730, 1615
BccI	CCATC	7 cut(s)	341, 377, 817, 1176, 1276, 1679, 1701
BceAI	ACGGC	4 cut(s)	650, 705, 1289, 1484
BcgI	CGANNNNNNTGC	4 cut(s)	479, 513, 1154, 1188
BciT130I	CCWGG	3 cut(s)	10, 869, 1619
BciVI	GTATCC	1 cut(s)	1689
BclI	TGATCA	1 cut(s)	1317
BcnI	CCSGG	1 cut(s)	1114
BcoDI	GTCTC	6 cut(s)	598, 1021, 1103, 1268, 1497, 1550
BfaI	CTAG	7 cut(s)	72, 779, 860, 938, 1092, 1124, 1753
BfmI	CTRYAG	3 cut(s)	31, 276, 1700
BfuI	GTATCC	1 cut(s)	1689
BisI	GCNGC	9 cut(s)	24, 31, 56, 412, 560, 572, 719, 846, 1604
BlpI	GCTNAGC	1 cut(s)	486
BlsI	GCNGC	9 cut(s)	25, 32, 57, 413, 561, 573, 720, 847, 1605
Bme1390I	CCNGG	4 cut(s)	10, 869, 1114, 1619
Bme18I	GGWCC	3 cut(s)	48, 1037, 1615
BmgT120I	GGNCC	4 cut(s)	48, 999, 1037, 1615
BmiI	GGNNCC	2 cut(s)	805, 1721
BmrFI	CCNGG	4 cut(s)	10, 869, 1114, 1619
BmsI	GCATC	4 cut(s)	320, 499, 1126, 1291
BmtI	GCTAGC	1 cut(s)	941
BpiI	GAAGAC	1 cut(s)	20
BplI	GAGNNNNNCTC	2 cut(s)	742, 774
Bpu1102I	GCTNAGC	1 cut(s)	486
Bpu14I	TTCGAA	1 cut(s)	195
BpuEI	CTTGAG	2 cut(s)	435, 1161
BpuMI	CCSGG	1 cut(s)	1114
BsaBI	GATNNNNATC	1 cut(s)	1478
BsaI	GGTCTC	2 cut(s)	1021, 1103
BsaJI	CCNNGG	2 cut(s)	666, 733
BsaWI	WCCGGW	1 cut(s)	1251
Bsc4I	CCNNNNNNNGG	3 cut(s)	347, 401, 1079
Bse118I	RCCGGY	1 cut(s)	1251
Bse1I	ACTGG	2 cut(s)	799, 1233
Bse3DI	GCAATG	2 cut(s)	523, 1170
Bse8I	GATNNNNATC	1 cut(s)	1478
BseBI	CCWGG	3 cut(s)	10, 869, 1619
BseDI	CCNNGG	2 cut(s)	666, 733
BseGI	GGATG	5 cut(s)	311, 388, 1187, 1479, 1712
BseJI	GATNNNNATC	1 cut(s)	1478
BseLI	CCNNNNNNNGG	3 cut(s)	347, 401, 1079
BseMI	GCAATG	2 cut(s)	523, 1170
BseMII	CTCAG	4 cut(s)	435, 477, 761, 1545
BseNI	ACTGG	2 cut(s)	799, 1233
BseRI	GAGGAG	2 cut(s)	715, 1637
BseSI	GKGCMC	1 cut(s)	661
BseXI	GCAGC	8 cut(s)	10, 17, 42, 423, 571, 583, 730, 1615
BseYI	CCCAGC	1 cut(s)	1592
BsgI	GTGCAG	1 cut(s)	9
Bsh1236I	CGCG	2 cut(s)	787, 1728
BshFI	GGCC	2 cut(s)	777, 1000
BshTI	ACCGGT	1 cut(s)	1251
BsiHKAI	GWGCWC	1 cut(s)	661
BsiSI	CCGG	2 cut(s)	1113, 1252
BslFI	GGGAC	2 cut(s)	1136, 1378
BslI	CCNNNNNNNGG	3 cut(s)	347, 401, 1079
BsmAI	GTCTC	6 cut(s)	598, 1021, 1103, 1268, 1497, 1550
BsmBI	CGTCTC	1 cut(s)	1268
BsmFI	GGGAC	2 cut(s)	1136, 1378
BsnI	GGCC	2 cut(s)	777, 1000
Bso31I	GGTCTC	2 cut(s)	1021, 1103
Bsp119I	TTCGAA	1 cut(s)	195
Bsp1286I	GDGCHC	1 cut(s)	661
Bsp143I	GATC	7 cut(s)	97, 581, 1204, 1317, 1353, 1575, 1719
Bsp1720I	GCTNAGC	1 cut(s)	486
Bsp19I	CCATGG	1 cut(s)	733
BspACI	CCGC	5 cut(s)	46, 846, 1073, 1471, 1726
BspANI	GGCC	2 cut(s)	777, 1000
BspCNI	CTCAG	4 cut(s)	436, 478, 760, 1546
BspFNI	CGCG	2 cut(s)	787, 1728
BspHI	TCATGA	1 cut(s)	930
BspLI	GGNNCC	2 cut(s)	805, 1721
BspMAI	CTGCAG	2 cut(s)	35, 1704
BspOI	GCTAGC	1 cut(s)	941
BspPI	GGATC	6 cut(s)	92, 589, 1212, 1361, 1714, 1727
BspT104I	TTCGAA	1 cut(s)	195
BspTNI	GGTCTC	2 cut(s)	1021, 1103
BsrDI	GCAATG	2 cut(s)	523, 1170
BsrFI	RCCGGY	1 cut(s)	1251
BsrI	ACTGG	2 cut(s)	799, 1233
BssAI	RCCGGY	1 cut(s)	1251
BssECI	CCNNGG	2 cut(s)	666, 733
BssMI	GATC	7 cut(s)	97, 581, 1204, 1317, 1353, 1575, 1719
BssSI	CACGAG	1 cut(s)	1455
BssT1I	CCWWGG	1 cut(s)	733
Bst2BI	CACGAG	1 cut(s)	1455
Bst2UI	CCWGG	3 cut(s)	10, 869, 1619
Bst4CI	ACNGT	4 cut(s)	273, 1279, 1395, 1450
Bst6I	CTCTTC	1 cut(s)	1101
BstBI	TTCGAA	1 cut(s)	195
BstC8I	GCNNGC	5 cut(s)	28, 416, 673, 939, 1525
BstDEI	CTNAG	4 cut(s)	444, 486, 747, 1554
BstDSI	CCRYGG	2 cut(s)	666, 733
BstF5I	GGATG	5 cut(s)	311, 388, 1187, 1479, 1712
BstFNI	CGCG	2 cut(s)	787, 1728
BstHHI	GCGC	2 cut(s)	787, 1730
BstKTI	GATC	7 cut(s)	100, 584, 1207, 1320, 1356, 1578, 1722
BstMAI	GTCTC	6 cut(s)	598, 1021, 1103, 1268, 1497, 1550
BstMBI	GATC	7 cut(s)	97, 581, 1204, 1317, 1353, 1575, 1719
BstMWI	GCNNNNNNNGC	3 cut(s)	52, 559, 568
BstNI	CCWGG	3 cut(s)	10, 869, 1619
BstNSI	RCATGY	2 cut(s)	743, 1527
BstSCI	CCNGG	4 cut(s)	8, 867, 1112, 1617
BstSFI	CTRYAG	3 cut(s)	31, 276, 1700
BstSLI	GKGCMC	1 cut(s)	661
BstUI	CGCG	2 cut(s)	787, 1728
BstV1I	GCAGC	8 cut(s)	10, 17, 42, 423, 571, 583, 730, 1615
BstV2I	GAAGAC	1 cut(s)	20
BstX2I	RGATCY	3 cut(s)	581, 1204, 1719
BstYI	RGATCY	3 cut(s)	581, 1204, 1719
BsuI	GTATCC	1 cut(s)	1689
BsuRI	GGCC	2 cut(s)	777, 1000
BtgI	CCRYGG	2 cut(s)	666, 733
BtgZI	GCGATG	1 cut(s)	1103
BtsCI	GGATG	5 cut(s)	311, 388, 1187, 1479, 1712
BtsI	GCAGTG	1 cut(s)	1697
BtsIMutI	CAGTG	1 cut(s)	1697
Cac8I	GCNNGC	5 cut(s)	28, 416, 673, 939, 1525
CaiI	CAGNNNCTG	1 cut(s)	848
CciI	TCATGA	1 cut(s)	930
CfoI	GCGC	2 cut(s)	787, 1730
Cfr10I	RCCGGY	1 cut(s)	1251
Cfr13I	GGNCC	4 cut(s)	48, 999, 1037, 1615
CsiI	ACCWGGT	1 cut(s)	867
Csp6I	GTAC	3 cut(s)	262, 516, 1162
CspAI	ACCGGT	1 cut(s)	1251
CviAII	CATG	8 cut(s)	643, 734, 740, 885, 931, 1268, 1349, 1524
CviQI	GTAC	3 cut(s)	262, 516, 1162
DdeI	CTNAG	4 cut(s)	444, 486, 747, 1554
DpnI	GATC	7 cut(s)	99, 583, 1206, 1319, 1355, 1577, 1721
DpnII	GATC	7 cut(s)	97, 581, 1204, 1317, 1353, 1575, 1719
DraIII	CACNNNGTG	1 cut(s)	295
Eam1104I	CTCTTC	1 cut(s)	1101
EarI	CTCTTC	1 cut(s)	1101
EciI	GGCGGA	1 cut(s)	1486
Eco130I	CCWWGG	1 cut(s)	733
Eco31I	GGTCTC	2 cut(s)	1021, 1103
Eco32I	GATATC	1 cut(s)	244
Eco47I	GGWCC	3 cut(s)	48, 1037, 1615
Eco57I	CTGAAG	2 cut(s)	725, 1331
EcoRI	GAATTC	1 cut(s)	236
EcoRII	CCWGG	3 cut(s)	8, 867, 1617
EcoRV	GATATC	1 cut(s)	244
EcoT14I	CCWWGG	1 cut(s)	733
ErhI	CCWWGG	1 cut(s)	733
Esp3I	CGTCTC	1 cut(s)	1268
FaeI	CATG	8 cut(s)	646, 737, 743, 888, 934, 1271, 1352, 1527
FaqI	GGGAC	2 cut(s)	1136, 1378
FatI	CATG	8 cut(s)	642, 733, 739, 884, 930, 1267, 1348, 1523
FbaI	TGATCA	1 cut(s)	1317
Fnu4HI	GCNGC	9 cut(s)	24, 31, 56, 412, 560, 572, 719, 846, 1604
FokI	GGATG	5 cut(s)	298, 395, 1194, 1486, 1719
Fsp4HI	GCNGC	9 cut(s)	24, 31, 56, 412, 560, 572, 719, 846, 1604
FspBI	CTAG	7 cut(s)	72, 779, 860, 938, 1092, 1124, 1753
GlaI	GCGC	2 cut(s)	786, 1729
GluI	GCNGC	9 cut(s)	24, 31, 56, 412, 560, 572, 719, 846, 1604
GsaI	CCCAGC	1 cut(s)	1596
HaeIII	GGCC	2 cut(s)	777, 1000
HapII	CCGG	2 cut(s)	1113, 1252
HhaI	GCGC	2 cut(s)	787, 1730
Hin1II	CATG	8 cut(s)	646, 737, 743, 888, 934, 1271, 1352, 1527
Hin6I	GCGC	2 cut(s)	785, 1728
HinP1I	GCGC	2 cut(s)	785, 1728
HinfI	GANTC	7 cut(s)	131, 161, 181, 304, 440, 509, 1744
HpaII	CCGG	2 cut(s)	1113, 1252
HphI	GGTGA	5 cut(s)	99, 140, 307, 810, 1291
Hpy166II	GTNNAC	2 cut(s)	659, 698
Hpy8I	GTNNAC	2 cut(s)	659, 698
HpyAV	CCTTC	6 cut(s)	349, 395, 617, 1012, 1390, 1710
HpyCH4III	ACNGT	4 cut(s)	273, 1279, 1395, 1450
HpyCH4IV	ACGT	2 cut(s)	283, 1078
HpyCH4V	TGCA	7 cut(s)	26, 33, 559, 659, 743, 1414, 1702
HpyF10VI	GCNNNNNNNGC	3 cut(s)	52, 559, 568
HpyF3I	CTNAG	4 cut(s)	444, 486, 747, 1554
HpySE526I	ACGT	2 cut(s)	283, 1078
Hsp92II	CATG	8 cut(s)	646, 737, 743, 888, 934, 1271, 1352, 1527
HspAI	GCGC	2 cut(s)	785, 1728
Ksp22I	TGATCA	1 cut(s)	1317
Kzo9I	GATC	7 cut(s)	97, 581, 1204, 1317, 1353, 1575, 1719
LmnI	GCTCC	1 cut(s)	1611
Lsp1109I	GCAGC	8 cut(s)	10, 17, 42, 423, 571, 583, 730, 1615
LweI	GCATC	4 cut(s)	320, 499, 1126, 1291
MabI	ACCWGGT	1 cut(s)	867
MaeI	CTAG	7 cut(s)	72, 779, 860, 938, 1092, 1124, 1753
MaeII	ACGT	2 cut(s)	283, 1078
MaeIII	GTNAC	3 cut(s)	471, 903, 1047
MalI	GATC	7 cut(s)	99, 583, 1206, 1319, 1355, 1577, 1721
MboI	GATC	7 cut(s)	97, 581, 1204, 1317, 1353, 1575, 1719
MboII	GAAGA	9 cut(s)	25, 718, 721, 1118, 1472, 1642, 1651, 1691, 1694
MfeI	CAATTG	1 cut(s)	1240
MflI	RGATCY	3 cut(s)	581, 1204, 1719
MhlI	GDGCHC	1 cut(s)	661
MluCI	AATT	7 cut(s)	190, 236, 266, 908, 1062, 1212, 1240
MlyI	GAGTC	3 cut(s)	190, 434, 1738
MmeI	TCCRAC	3 cut(s)	781, 1036, 1593
MseI	TTAA	3 cut(s)	87, 1209, 1256
MslI	CAYNNNNRTG	3 cut(s)	738, 1266, 1419
MspA1I	CMGCKG	1 cut(s)	848
MspI	CCGG	2 cut(s)	1113, 1252
MspR9I	CCNGG	4 cut(s)	10, 869, 1114, 1619
MunI	CAATTG	1 cut(s)	1240
MvaI	CCWGG	3 cut(s)	10, 869, 1619
MvnI	CGCG	2 cut(s)	787, 1728
MwoI	GCNNNNNNNGC	3 cut(s)	52, 559, 568
NciI	CCSGG	1 cut(s)	1114
NcoI	CCATGG	1 cut(s)	733
NdeII	GATC	7 cut(s)	97, 581, 1204, 1317, 1353, 1575, 1719
NheI	GCTAGC	1 cut(s)	937
NlaIII	CATG	8 cut(s)	646, 737, 743, 888, 934, 1271, 1352, 1527
NlaIV	GGNNCC	2 cut(s)	805, 1721
NmuCI	GTSAC	1 cut(s)	903
NspI	RCATGY	2 cut(s)	743, 1527
NspV	TTCGAA	1 cut(s)	195
PaeI	GCATGC	1 cut(s)	1527
PagI	TCATGA	1 cut(s)	930
PcsI	WCGNNNNNNNCGW	2 cut(s)	1084, 1524
PfeI	GAWTC	4 cut(s)	131, 161, 304, 509
PflMI	CCANNNNNTGG	1 cut(s)	347
PfoI	TCCNGGA	1 cut(s)	8
PinAI	ACCGGT	1 cut(s)	1251
PkrI	GCNGC	9 cut(s)	25, 32, 57, 413, 561, 573, 720, 847, 1605
PleI	GAGTC	3 cut(s)	189, 434, 1738
PpsI	GAGTC	3 cut(s)	189, 434, 1738
Psp6I	CCWGG	3 cut(s)	8, 867, 1617
PspFI	CCCAGC	1 cut(s)	1592
PspGI	CCWGG	3 cut(s)	8, 867, 1617
PspN4I	GGNNCC	2 cut(s)	805, 1721
PspPI	GGNCC	4 cut(s)	48, 999, 1037, 1615
PstI	CTGCAG	2 cut(s)	35, 1704
PstNI	CAGNNNCTG	1 cut(s)	848
PsuI	RGATCY	3 cut(s)	581, 1204, 1719
RsaI	GTAC	3 cut(s)	263, 517, 1163
RsaNI	GTAC	3 cut(s)	262, 516, 1162
RseI	CAYNNNNRTG	3 cut(s)	738, 1266, 1419
SaqAI	TTAA	3 cut(s)	87, 1209, 1256
SatI	GCNGC	9 cut(s)	24, 31, 56, 412, 560, 572, 719, 846, 1604
Sau3AI	GATC	7 cut(s)	97, 581, 1204, 1317, 1353, 1575, 1719
Sau96I	GGNCC	4 cut(s)	48, 999, 1037, 1615
SchI	GAGTC	3 cut(s)	190, 434, 1738
ScrFI	CCNGG	4 cut(s)	10, 869, 1114, 1619
SduI	GDGCHC	1 cut(s)	661
SexAI	ACCWGGT	1 cut(s)	867
SfaNI	GCATC	4 cut(s)	320, 499, 1126, 1291
SfcI	CTRYAG	3 cut(s)	31, 276, 1700
SfuI	TTCGAA	1 cut(s)	195
SinI	GGWCC	3 cut(s)	48, 1037, 1615
SmiMI	CAYNNNNRTG	3 cut(s)	738, 1266, 1419
SmlI	CTYRAG	2 cut(s)	450, 1176
SmoI	CTYRAG	2 cut(s)	450, 1176
SphI	GCATGC	1 cut(s)	1527
Sse9I	AATT	7 cut(s)	190, 236, 266, 908, 1062, 1212, 1240
SsiI	CCGC	5 cut(s)	46, 846, 1073, 1471, 1726
SspMI	CTAG	7 cut(s)	72, 779, 860, 938, 1092, 1124, 1753
StyD4I	CCNGG	4 cut(s)	8, 867, 1112, 1617
StyI	CCWWGG	1 cut(s)	733
TaaI	ACNGT	4 cut(s)	273, 1279, 1395, 1450
TaiI	ACGT	2 cut(s)	286, 1081
TaqI	TCGA	4 cut(s)	195, 240, 1087, 1482
TaqII	GACCGA	2 cut(s)	1045, 1233
TasI	AATT	7 cut(s)	190, 236, 266, 908, 1062, 1212, 1240
TauI	GCSGC	1 cut(s)	848
TfiI	GAWTC	4 cut(s)	131, 161, 304, 509
Tru1I	TTAA	3 cut(s)	87, 1209, 1256
Tru9I	TTAA	3 cut(s)	87, 1209, 1256
TscAI	CASTG	1 cut(s)	1697
TseFI	GTSAC	1 cut(s)	903
TseI	GCWGC	8 cut(s)	23, 30, 55, 411, 559, 571, 718, 1603
Tsp45I	GTSAC	1 cut(s)	903
TspRI	CASTG	1 cut(s)	1697
Van91I	CCANNNNNTGG	1 cut(s)	347
VneI	GTGCAC	1 cut(s)	657
VpaK11BI	GGWCC	3 cut(s)	48, 1037, 1615
XapI	RAATTY	2 cut(s)	190, 236
XceI	RCATGY	2 cut(s)	743, 1527
XspI	CTAG	7 cut(s)	72, 779, 860, 938, 1092, 1124, 1753

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.