Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000175

Physical Location & Seq

Genomic Coordinates Reverse (-)

8130580 .. 8133055

Gene Structure 2476 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1098100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGATACCCTTTTTGAAAGATTTTATGTTCCCATGGAAAGATTCACTGTTGGTCAGGGATCTAATCAAAATCTTGGAAATCATGAATCCACCAATCCAATTTTTCTTCCAACAAACTTGGACCACAATCATAGTGATTCGAGCTCGTCCCAGAATCTTGTAAATGGATTCCAAGTGAACCATGAACCCACCAATACACTTTTCCTTCCGCCCAACTCAGACCATCCAAGTGAATCCGAGTTTTCGAGCTCGGGTTCAGATGGAGATACTTTTGATATTAGTGTTTGCAATCATCCCGTGCTCAAGTACATAAGCGATATTCTTTTGGAAGAAGATTTGGAGGGTAAGCCCTGCATGTTGCAGGACTGCTTGGCCCTCCAAGCTGCCGAGAAATCTTTCTATGATGTTCTTAAACCGAAGGGCCCTTCGTCCAGTCAATCCCCTCTTCCGGTGGACCGAAGCTTTGAGAACTCAGATGATGATTTCAAAGAGAGTTGCCATATTAGTATTGGCTGTGTTGCTGCTAGGACAGACTCGGTTTCGGGTTCAGAAATCTCTCATATCCAATCTTGTCCGGTTGAGTCTTCATCGGATGCCTACAACTCAACATATAGATTGAAGTCAAAGAAAAATCACCTGAGGGAGGATGGCGATTATACAGAAGAAGGGAGAAGCAACAAACAGTCGGCTGCTTCTGCTGATGGGCCCGAGCCACAAGAAATGTTTGATGAGGTTTTGCTGTATAAGGATGCGAGGCGTGCGTTTGAGTCTTGTTCTGATGATCAGTCTGTCAAAACTGACGGAAGTGGGAAGTTGAAGTGCAACAAGCAACCAAAAGTTTCTAAGGCAGCACGCTCGAAGACAAAGAATAAGAACAGGGAAGTAGTAGATTTGTGCACAATGCTGACTCAATGCGCACAAGCTGTGGCAAGCTATGACCAGCAAACAGCGAGTGAACTAATCAAGAAGATAAGGAAGCACTCTTCTCCCTATGGTGAGGCAACCGAGAGATTAGCTTATTACTTTGCTAACGCCCTAGAGGCGCGGTTGGCTGGCTCCAGAACCCCCTCATATTCTCCTCTTTTAAGTCCGCAGACACCAGCTACCGAAATCTTAAAAGCTCACCAGGTGTATATTACTTCATGCCCTTTCATGAAGATGATGTACTTCTTCGCCAATAGAACAATTATGAAACTGGCGGAAAATGCTACGAGGCTTCACATTATTGATTTTGGTATTTCGTATGGTTTCCAATGGCCATGCCTTATCCAACGCCTCTCGGAGAGATGTGGTGGACCTCCTAATCTTCGTTTCACAGCAATTGAGCTCCCCCAACCAGGTTTTCGACCTACTGAAAGGGTTGAAGAGACAATGCGTCGCTTAGAAAAATATGCTAAGAGATTCGTTGTCCCATTTGAGTATAATGTCATTGCTCAGAAATGGGAAACTATCCGATTTGAGGATCTTAAAGTTGACAGGAATGAGCTGACTGTTGTTAACTGTATGCGCCGATTAAGGCACATACCTGATGAAACAGTCGTGATGAGCAGTCCGAGAGACACTGTCCTTAACTTGATCAAGAAAATAAATCCAGATCTTTTCATTCACGGAGTTGTCAACGGGACATACAATTCGCCCTTCTTTGTCAAGCGGTTCAGAGAAGCACTCTTCCATTACTCTTCGCTGTTTGATATGTTTGAGGCCACTATTCCTCGCGAAGATGAACACCGGCTGATGTTTGAAGGAGCAGTATATGGTAGAGACATAATGAATGTTATAGCATGCGAGGGGATCGAACGAGTTGAAAGGCCGGAGACATACAAGCATTGGCAGGTTAGGTATCAGCGGGCAGGGTTCAAGCAGGTGCCGCTAGACCAGGAGCTCATGAGGAAAGTGAAAGCTATGCTGAAGTTGATGCGCTATCACAACGATTTTCGAATCGATGAAGATGGCCACTGGATGCTGCAGGGATGGAAAGGAAGAATTGTCATGGCTCTTTCTGCTTTGAAACCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

673

Amino Acids

76.66

Weight (kDa)

6.37

Isoelectric Point (pI)

54.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	300 - 668	6.3e-121	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000175)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca	FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica	MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica	Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis	pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis	RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata	RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora	Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa	Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha	Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana	Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1852
Acc16I	TGCGCA	1 cut(s)	916
Acc36I	ACCTGC	2 cut(s)	1822, 1852
AccB1I	GGYRCC	1 cut(s)	1864
AccII	CGCG	2 cut(s)	1045, 1716
AciI	CCGC	7 cut(s)	209, 1045, 1091, 1199, 1651, 1846, 1868
AclWI	GGATC	3 cut(s)	67, 1470, 1799
AcoI	YGGCCR	2 cut(s)	1256, 1951
AcuI	CTGAAG	1 cut(s)	1928
AdeI	CACNNNGTG	1 cut(s)	1129
AfaI	GTAC	2 cut(s)	308, 1166
AfiI	CCNNNNNNNGG	4 cut(s)	448, 643, 1337, 1459
AgsI	TTSAA	9 cut(s)	17, 487, 619, 817, 1364, 1742, 1805, 1858, 2008
AhdI	GACNNNNNGTC	1 cut(s)	1374
AjnI	CCWGG	3 cut(s)	1125, 1336, 1875
AjuI	GAANNNNNNNTTGG	4 cut(s)	185, 217, 1326, 1358
Alw21I	GWGCWC	6 cut(s)	146, 251, 303, 899, 1329, 1884
Alw26I	GTCTC	4 cut(s)	1361, 1551, 1755, 1808
Alw44I	GTGCAC	1 cut(s)	895
AlwI	GGATC	3 cut(s)	67, 1470, 1799
Ama87I	CYCGRG	2 cut(s)	250, 707
AoxI	GGCC	7 cut(s)	372, 421, 704, 1256, 1701, 1808, 1951
ApaI	GGGCCC	2 cut(s)	425, 708
ApaLI	GTGCAC	1 cut(s)	895
ApeKI	GCWGC	5 cut(s)	383, 521, 689, 848, 1963
ArsI	GACNNNNNNTTYG	4 cut(s)	446, 478, 1615, 1647
Asp700I	GAANNNNTTC	1 cut(s)	395
AspLEI	GCGC	4 cut(s)	917, 1045, 1509, 1920
AspS9I	GGNCC	8 cut(s)	121, 373, 421, 422, 454, 704, 705, 1295
AsuHPI	GGTGA	3 cut(s)	626, 1007, 1115
AsuII	TTCGAA	1 cut(s)	1936
AvaI	CYCGRG	2 cut(s)	250, 707
AvaII	GGWCC	3 cut(s)	121, 454, 1295
AxyI	CCTNAGG	1 cut(s)	638
BaeGI	GKGCMC	3 cut(s)	425, 708, 899
BalI	TGGCCA	2 cut(s)	1258, 1953
BanI	GGYRCC	1 cut(s)	1864
BanII	GRGCYC	6 cut(s)	146, 251, 425, 708, 1329, 1884
BarI	GAAGNNNNNNTAC	2 cut(s)	1148, 1180
BbsI	GAAGAC	2 cut(s)	576, 866
Bbv12I	GWGCWC	6 cut(s)	146, 251, 303, 899, 1329, 1884
BbvI	GCAGC	5 cut(s)	370, 508, 676, 860, 1950
BccI	CCATC	6 cut(s)	231, 254, 641, 695, 1943, 1965
BcgI	CGANNNNNNTGC	2 cut(s)	837, 871
BciT130I	CCWGG	3 cut(s)	1127, 1338, 1877
BclI	TGATCA	2 cut(s)	781, 1575
BcoDI	GTCTC	4 cut(s)	1361, 1551, 1755, 1808
BfaI	CTAG	3 cut(s)	525, 1037, 1871
BfmI	CTRYAG	1 cut(s)	1964
BfuAI	ACCTGC	2 cut(s)	1822, 1852
BglI	GCCNNNNNGGC	1 cut(s)	1040
BglII	AGATCT	1 cut(s)	1594
BisI	GCNGC	6 cut(s)	384, 522, 690, 849, 1868, 1964
BlsI	GCNGC	6 cut(s)	385, 523, 691, 850, 1869, 1965
Bme1390I	CCNGG	3 cut(s)	1127, 1338, 1877
Bme18I	GGWCC	3 cut(s)	121, 454, 1295
BmeRI	GACNNNNNGTC	1 cut(s)	1374
BmeT110I	CYCGRG	2 cut(s)	250, 707
BmgT120I	GGNCC	8 cut(s)	121, 373, 421, 422, 454, 704, 705, 1295
BmiI	GGNNCC	4 cut(s)	423, 706, 1057, 1866
BmrFI	CCNGG	3 cut(s)	1127, 1338, 1877
BmsI	GCATC	4 cut(s)	583, 739, 1905, 1950
BpiI	GAAGAC	2 cut(s)	576, 866
BplI	GAGNNNNNCTC	2 cut(s)	1650, 1682
BpmI	CTGGAG	1 cut(s)	1042
Bpu14I	TTCGAA	1 cut(s)	1936
BpuEI	CTTGAG	1 cut(s)	287
Bsa29I	ATCGAT	1 cut(s)	1941
BsaJI	CCNNGG	1 cut(s)	33
BsaWI	WCCGGW	2 cut(s)	448, 574
Bsc4I	CCNNNNNNNGG	4 cut(s)	448, 643, 1337, 1459
Bse118I	RCCGGY	1 cut(s)	1728
Bse1I	ACTGG	3 cut(s)	432, 1200, 1961
Bse21I	CCTNAGG	1 cut(s)	638
Bse3DI	GCAATG	1 cut(s)	1428
BseBI	CCWGG	3 cut(s)	1127, 1338, 1877
BseCI	ATCGAT	1 cut(s)	1941
BseDI	CCNNGG	1 cut(s)	33
BseGI	GGATG	7 cut(s)	223, 292, 598, 652, 754, 1965, 1976
BseLI	CCNNNNNNNGG	4 cut(s)	448, 643, 1337, 1459
BseMI	GCAATG	1 cut(s)	1428
BseMII	CTCAG	4 cut(s)	231, 486, 629, 1448
BseNI	ACTGG	3 cut(s)	432, 1200, 1961
BseRI	GAGGAG	1 cut(s)	1068
BseSI	GKGCMC	3 cut(s)	425, 708, 899
BseXI	GCAGC	5 cut(s)	370, 508, 676, 860, 1950
Bsh1236I	CGCG	2 cut(s)	1045, 1716
BshFI	GGCC	7 cut(s)	374, 423, 706, 1258, 1703, 1810, 1953
BshNI	GGYRCC	1 cut(s)	1864
BshVI	ATCGAT	1 cut(s)	1941
BsiHKAI	GWGCWC	6 cut(s)	146, 251, 303, 899, 1329, 1884
BsiHKCI	CYCGRG	2 cut(s)	250, 707
BsiSI	CCGG	4 cut(s)	449, 575, 1729, 1811
BslFI	GGGAC	3 cut(s)	133, 1394, 1636
BslI	CCNNNNNNNGG	4 cut(s)	448, 643, 1337, 1459
BsmAI	GTCTC	4 cut(s)	1361, 1551, 1755, 1808
BsmFI	GGGAC	3 cut(s)	133, 1394, 1636
BsnI	GGCC	7 cut(s)	374, 423, 706, 1258, 1703, 1810, 1953
BsoBI	CYCGRG	2 cut(s)	250, 707
Bsp119I	TTCGAA	1 cut(s)	1936
Bsp120I	GGGCCC	2 cut(s)	421, 704
Bsp1286I	GDGCHC	8 cut(s)	146, 251, 303, 425, 708, 899, 1329, 1884
Bsp143I	GATC	6 cut(s)	59, 781, 1462, 1575, 1594, 1791
Bsp19I	CCATGG	1 cut(s)	33
Bsp68I	TCGCGA	1 cut(s)	1716
BspACI	CCGC	7 cut(s)	209, 1045, 1091, 1199, 1651, 1846, 1868
BspANI	GGCC	7 cut(s)	374, 423, 706, 1258, 1703, 1810, 1953
BspCNI	CTCAG	4 cut(s)	230, 485, 630, 1447
BspDI	ATCGAT	1 cut(s)	1941
BspFNI	CGCG	2 cut(s)	1045, 1716
BspHI	TCATGA	3 cut(s)	82, 1152, 1884
BspLI	GGNNCC	4 cut(s)	423, 706, 1057, 1866
BspMAI	CTGCAG	1 cut(s)	1968
BspMI	ACCTGC	2 cut(s)	1822, 1852
BspPI	GGATC	3 cut(s)	67, 1470, 1799
BspT104I	TTCGAA	1 cut(s)	1936
BspT107I	GGYRCC	1 cut(s)	1864
BsrDI	GCAATG	1 cut(s)	1428
BsrFI	RCCGGY	1 cut(s)	1728
BsrI	ACTGG	3 cut(s)	432, 1200, 1961
BssAI	RCCGGY	1 cut(s)	1728
BssECI	CCNNGG	1 cut(s)	33
BssMI	GATC	6 cut(s)	59, 781, 1462, 1575, 1594, 1791
BssT1I	CCWWGG	1 cut(s)	33
Bst2UI	CCWGG	3 cut(s)	1127, 1338, 1877
Bst4CI	ACNGT	6 cut(s)	49, 684, 1492, 1502, 1537, 1564
Bst6I	CTCTTC	5 cut(s)	450, 988, 1359, 1673, 1684
BstBI	TTCGAA	1 cut(s)	1936
BstC8I	GCNNGC	6 cut(s)	759, 853, 931, 1054, 1783, 1848
BstDEI	CTNAG	8 cut(s)	217, 472, 638, 843, 1381, 1395, 1434, 2016
BstDSI	CCRYGG	1 cut(s)	33
BstENI	CCTNNNNNAGG	1 cut(s)	641
BstF5I	GGATG	7 cut(s)	223, 292, 598, 652, 754, 1965, 1976
BstFNI	CGCG	2 cut(s)	1045, 1716
BstHHI	GCGC	4 cut(s)	917, 1045, 1509, 1920
BstKTI	GATC	6 cut(s)	62, 784, 1465, 1578, 1597, 1794
BstMAI	GTCTC	4 cut(s)	1361, 1551, 1755, 1808
BstMBI	GATC	6 cut(s)	59, 781, 1462, 1575, 1594, 1791
BstMWI	GCNNNNNNNGC	8 cut(s)	380, 695, 758, 1040, 1049, 1205, 1867, 2000
BstNI	CCWGG	3 cut(s)	1127, 1338, 1877
BstNSI	RCATGY	2 cut(s)	358, 1785
BstSCI	CCNGG	3 cut(s)	1125, 1336, 1875
BstSFI	CTRYAG	1 cut(s)	1964
BstSLI	GKGCMC	3 cut(s)	425, 708, 899
BstUI	CGCG	2 cut(s)	1045, 1716
BstV1I	GCAGC	5 cut(s)	370, 508, 676, 860, 1950
BstV2I	GAAGAC	2 cut(s)	576, 866
BstX2I	RGATCY	3 cut(s)	59, 1462, 1594
BstYI	RGATCY	3 cut(s)	59, 1462, 1594
Bsu15I	ATCGAT	1 cut(s)	1941
Bsu36I	CCTNAGG	1 cut(s)	638
BsuRI	GGCC	7 cut(s)	374, 423, 706, 1258, 1703, 1810, 1953
BsuTUI	ATCGAT	1 cut(s)	1941
BtgI	CCRYGG	1 cut(s)	33
BtsCI	GGATG	7 cut(s)	223, 292, 598, 652, 754, 1965, 1976
BtsIMutI	CAGTG	3 cut(s)	45, 1560, 1954
BtuMI	TCGCGA	1 cut(s)	1716
BveI	ACCTGC	2 cut(s)	1822, 1852
Cac8I	GCNNGC	6 cut(s)	759, 853, 931, 1054, 1783, 1848
CciI	TCATGA	3 cut(s)	82, 1152, 1884
CfoI	GCGC	4 cut(s)	917, 1045, 1509, 1920
Cfr10I	RCCGGY	1 cut(s)	1728
Cfr13I	GGNCC	8 cut(s)	121, 373, 421, 422, 454, 704, 705, 1295
ClaI	ATCGAT	1 cut(s)	1941
CseI	GACGC	1 cut(s)	1364
CsiI	ACCWGGT	2 cut(s)	1125, 1336
Csp6I	GTAC	2 cut(s)	307, 1165
CviQI	GTAC	2 cut(s)	307, 1165
DdeI	CTNAG	8 cut(s)	217, 472, 638, 843, 1381, 1395, 1434, 2016
DpnI	GATC	6 cut(s)	61, 783, 1464, 1577, 1596, 1793
DpnII	GATC	6 cut(s)	59, 781, 1462, 1575, 1594, 1791
DraIII	CACNNNGTG	1 cut(s)	1129
DriI	GACNNNNNGTC	1 cut(s)	1374
EaeI	YGGCCR	2 cut(s)	1256, 1951
Eam1104I	CTCTTC	5 cut(s)	450, 988, 1359, 1673, 1684
Eam1105I	GACNNNNNGTC	1 cut(s)	1374
EarI	CTCTTC	5 cut(s)	450, 988, 1359, 1673, 1684
EciI	GGCGGA	2 cut(s)	198, 1214
Ecl136II	GAGCTC	4 cut(s)	144, 249, 1327, 1882
Eco130I	CCWWGG	1 cut(s)	33
Eco24I	GRGCYC	6 cut(s)	146, 251, 425, 708, 1329, 1884
Eco47I	GGWCC	3 cut(s)	121, 454, 1295
Eco53kI	GAGCTC	4 cut(s)	144, 249, 1327, 1882
Eco57I	CTGAAG	1 cut(s)	1928
Eco81I	CCTNAGG	1 cut(s)	638
Eco88I	CYCGRG	2 cut(s)	250, 707
EcoICRI	GAGCTC	4 cut(s)	144, 249, 1327, 1882
EcoNI	CCTNNNNNAGG	1 cut(s)	641
EcoO109I	RGGNCCY	2 cut(s)	421, 422
EcoRII	CCWGG	3 cut(s)	1125, 1336, 1875
EcoT14I	CCWWGG	1 cut(s)	33
EcoT38I	GRGCYC	6 cut(s)	146, 251, 425, 708, 1329, 1884
ErhI	CCWWGG	1 cut(s)	33
FaqI	GGGAC	3 cut(s)	133, 1394, 1636
FauI	CCCGC	1 cut(s)	1839
FbaI	TGATCA	2 cut(s)	781, 1575
Fnu4HI	GCNGC	6 cut(s)	384, 522, 690, 849, 1868, 1964
FokI	GGATG	7 cut(s)	210, 279, 605, 659, 761, 1972, 1983
FriOI	GRGCYC	6 cut(s)	146, 251, 425, 708, 1329, 1884
Fsp4HI	GCNGC	6 cut(s)	384, 522, 690, 849, 1868, 1964
FspAI	RTGCGCAY	1 cut(s)	916
FspBI	CTAG	3 cut(s)	525, 1037, 1871
FspI	TGCGCA	1 cut(s)	916
GlaI	GCGC	4 cut(s)	916, 1044, 1508, 1919
GluI	GCNGC	6 cut(s)	384, 522, 690, 849, 1868, 1964
GsuI	CTGGAG	1 cut(s)	1042
HaeIII	GGCC	7 cut(s)	374, 423, 706, 1258, 1703, 1810, 1953
HapII	CCGG	4 cut(s)	449, 575, 1729, 1811
HgaI	GACGC	1 cut(s)	1364
HhaI	GCGC	4 cut(s)	917, 1045, 1509, 1920
Hin6I	GCGC	4 cut(s)	915, 1043, 1507, 1918
HinP1I	GCGC	4 cut(s)	915, 1043, 1507, 1918
HincII	GTYRAC	3 cut(s)	1474, 1498, 1618
HindII	GTYRAC	3 cut(s)	1474, 1498, 1618
HindIII	AAGCTT	1 cut(s)	460
HpaI	GTTAAC	1 cut(s)	1498
HpaII	CCGG	4 cut(s)	449, 575, 1729, 1811
HphI	GGTGA	3 cut(s)	626, 1007, 1115
Hpy166II	GTNNAC	8 cut(s)	178, 454, 897, 956, 1295, 1474, 1498, 1618
Hpy188III	TCNNGA	9 cut(s)	83, 964, 1059, 1153, 1540, 1579, 1592, 1715, 1885
Hpy8I	GTNNAC	8 cut(s)	178, 454, 897, 956, 1295, 1474, 1498, 1618
Hpy99I	CGWCG	1 cut(s)	1380
HpyAV	CCTTC	6 cut(s)	215, 412, 435, 659, 1648, 1736
HpyCH4III	ACNGT	6 cut(s)	49, 684, 1492, 1502, 1537, 1564
HpyCH4V	TGCA	6 cut(s)	288, 354, 361, 822, 897, 1966
HpyF10VI	GCNNNNNNNGC	8 cut(s)	380, 695, 758, 1040, 1049, 1205, 1867, 2000
HpyF3I	CTNAG	8 cut(s)	217, 472, 638, 843, 1381, 1395, 1434, 2016
HspAI	GCGC	4 cut(s)	915, 1043, 1507, 1918
Ksp22I	TGATCA	2 cut(s)	781, 1575
KspAI	GTTAAC	1 cut(s)	1498
Kzo9I	GATC	6 cut(s)	59, 781, 1462, 1575, 1594, 1791
LmnI	GCTCC	4 cut(s)	1061, 1332, 1745, 1879
Lsp1109I	GCAGC	5 cut(s)	370, 508, 676, 860, 1950
LweI	GCATC	4 cut(s)	583, 739, 1905, 1950
MabI	ACCWGGT	2 cut(s)	1125, 1336
MaeI	CTAG	3 cut(s)	525, 1037, 1871
MalI	GATC	6 cut(s)	61, 783, 1464, 1577, 1596, 1793
MboI	GATC	6 cut(s)	59, 781, 1462, 1575, 1594, 1791
MfeI	CAATTG	1 cut(s)	1320
MflI	RGATCY	3 cut(s)	59, 1462, 1594
MhlI	GDGCHC	8 cut(s)	146, 251, 303, 425, 708, 899, 1329, 1884
MlsI	TGGCCA	2 cut(s)	1258, 1953
MluCI	AATT	5 cut(s)	99, 1185, 1320, 1630, 1983
MluNI	TGGCCA	2 cut(s)	1258, 1953
MlyI	GAGTC	4 cut(s)	527, 590, 776, 901
MmeI	TCCRAC	2 cut(s)	134, 1294
Mox20I	TGGCCA	2 cut(s)	1258, 1953
MroXI	GAANNNNTTC	1 cut(s)	395
MscI	TGGCCA	2 cut(s)	1258, 1953
MseI	TTAA	7 cut(s)	411, 1085, 1115, 1467, 1497, 1514, 1569
MslI	CAYNNNNRTG	2 cut(s)	228, 1157
Msp20I	TGGCCA	2 cut(s)	1258, 1953
MspA1I	CMGCKG	1 cut(s)	1846
MspI	CCGG	4 cut(s)	449, 575, 1729, 1811
MspR9I	CCNGG	3 cut(s)	1127, 1338, 1877
MunI	CAATTG	1 cut(s)	1320
MvaI	CCWGG	3 cut(s)	1127, 1338, 1877
MvnI	CGCG	2 cut(s)	1045, 1716
MwoI	GCNNNNNNNGC	8 cut(s)	380, 695, 758, 1040, 1049, 1205, 1867, 2000
NcoI	CCATGG	1 cut(s)	33
NdeII	GATC	6 cut(s)	59, 781, 1462, 1575, 1594, 1791
NlaIV	GGNNCC	4 cut(s)	423, 706, 1057, 1866
NmeAIII	GCCGAG	1 cut(s)	412
NruI	TCGCGA	1 cut(s)	1716
NsbI	TGCGCA	1 cut(s)	916
NspI	RCATGY	2 cut(s)	358, 1785
NspV	TTCGAA	1 cut(s)	1936
PaeI	GCATGC	1 cut(s)	1785
PagI	TCATGA	3 cut(s)	82, 1152, 1884
PaqCI	CACCTGC	1 cut(s)	1852
PdmI	GAANNNNTTC	1 cut(s)	395
PfeI	GAWTC	8 cut(s)	42, 86, 137, 154, 168, 233, 1401, 1938
PflFI	GACNNNGTC	1 cut(s)	1562
PkrI	GCNGC	6 cut(s)	385, 523, 691, 850, 1869, 1965
PleI	GAGTC	4 cut(s)	527, 589, 775, 901
PpsI	GAGTC	4 cut(s)	527, 589, 775, 901
Psp124BI	GAGCTC	4 cut(s)	146, 251, 1329, 1884
Psp6I	CCWGG	3 cut(s)	1125, 1336, 1875
PspGI	CCWGG	3 cut(s)	1125, 1336, 1875
PspN4I	GGNNCC	4 cut(s)	423, 706, 1057, 1866
PspOMI	GGGCCC	2 cut(s)	421, 704
PspPI	GGNCC	8 cut(s)	121, 373, 421, 422, 454, 704, 705, 1295
PstI	CTGCAG	1 cut(s)	1968
PsuI	RGATCY	3 cut(s)	59, 1462, 1594
PsyI	GACNNNGTC	1 cut(s)	1562
RruI	TCGCGA	1 cut(s)	1716
RsaI	GTAC	2 cut(s)	308, 1166
RsaNI	GTAC	2 cut(s)	307, 1165
RseI	CAYNNNNRTG	2 cut(s)	228, 1157
SacI	GAGCTC	4 cut(s)	146, 251, 1329, 1884
SaqAI	TTAA	7 cut(s)	411, 1085, 1115, 1467, 1497, 1514, 1569
SatI	GCNGC	6 cut(s)	384, 522, 690, 849, 1868, 1964
Sau3AI	GATC	6 cut(s)	59, 781, 1462, 1575, 1594, 1791
Sau96I	GGNCC	8 cut(s)	121, 373, 421, 422, 454, 704, 705, 1295
SchI	GAGTC	4 cut(s)	527, 590, 776, 901
ScrFI	CCNGG	3 cut(s)	1127, 1338, 1877
SduI	GDGCHC	8 cut(s)	146, 251, 303, 425, 708, 899, 1329, 1884
SexAI	ACCWGGT	2 cut(s)	1125, 1336
SfaNI	GCATC	4 cut(s)	583, 739, 1905, 1950
SfcI	CTRYAG	1 cut(s)	1964
SfuI	TTCGAA	1 cut(s)	1936
SinI	GGWCC	3 cut(s)	121, 454, 1295
SmiMI	CAYNNNNRTG	2 cut(s)	228, 1157
SmlI	CTYRAG	1 cut(s)	302
SmoI	CTYRAG	1 cut(s)	302
SphI	GCATGC	1 cut(s)	1785
Sse9I	AATT	5 cut(s)	99, 1185, 1320, 1630, 1983
SsiI	CCGC	7 cut(s)	209, 1045, 1091, 1199, 1651, 1846, 1868
SspMI	CTAG	3 cut(s)	525, 1037, 1871
SstI	GAGCTC	4 cut(s)	146, 251, 1329, 1884
StyD4I	CCNGG	3 cut(s)	1125, 1336, 1875
StyI	CCWWGG	1 cut(s)	33
TaaI	ACNGT	6 cut(s)	49, 684, 1492, 1502, 1537, 1564
TaqI	TCGA	7 cut(s)	140, 245, 857, 1345, 1794, 1936, 1941
TaqII	GACCGA	1 cut(s)	471
TasI	AATT	5 cut(s)	99, 1185, 1320, 1630, 1983
TatI	WGTACW	2 cut(s)	306, 1164
TauI	GCSGC	1 cut(s)	1870
TfiI	GAWTC	8 cut(s)	42, 86, 137, 154, 168, 233, 1401, 1938
Tru1I	TTAA	7 cut(s)	411, 1085, 1115, 1467, 1497, 1514, 1569
Tru9I	TTAA	7 cut(s)	411, 1085, 1115, 1467, 1497, 1514, 1569
TscAI	CASTG	3 cut(s)	52, 1567, 1961
TseI	GCWGC	5 cut(s)	383, 521, 689, 848, 1963
TspGWI	ACGGA	2 cut(s)	816, 1623
TspRI	CASTG	3 cut(s)	52, 1567, 1961
Tth111I	GACNNNGTC	1 cut(s)	1562
VneI	GTGCAC	1 cut(s)	895
VpaK11BI	GGWCC	3 cut(s)	121, 454, 1295
XagI	CCTNNNNNAGG	1 cut(s)	641
XceI	RCATGY	2 cut(s)	358, 1785
XcmI	CCANNNNNNNNNTGG	1 cut(s)	506
XmnI	GAANNNNTTC	1 cut(s)	395
XspI	CTAG	3 cut(s)	525, 1037, 1871

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.