Rh5AG431900

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000175
Physical Location & Seq
Forward (+)
74256441 .. 74258459
2019 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG431900.1

Sequence Viewer

Length: 2019 bp
ATGGATGAATTTCCAAGTTCCATGAATAATTTCATGTTTTACCAGAACTCAATGCCAACTTCAGGTCAGAATATCCTTGTTACTGAATCTGATCAACACAATCATGAATTCAGTGATCCCAGTTTCTTTCCATCCAATCCAAACCCTCCTTCTCGTGATGATTCATCTTCATCTTTGGGTTTGAGCTCAGAGGGGGAGTATTACTCTCCCTCTATTGCTACTCTCCAATACATAAGTCAGATGCTTATGGAAGAAGACTTGCAGAACAAACCCTGCATGCTTCAGGACTGTTTGGCCCTCCAAGCCACTGAGAAATCCTTACATGATGTCCTAGTTCAGCAATATCCTTCTTCGACTAATCACCTTCTCACTTCCACTCAGCAAAATGTTGAGATATCTGATGATTTCATTAACCACAGCAGTAATAGCTCCACTGCCGCTAGGAACTGGGATGATGGCTCAGGTTGGATTTCTTTACAAAATGTTCTAGAATCCTTTCCTGTGGAAAATACTACCCTTTCAGTTCCAAATCCTTTTTCCTCAAATGGCAAGAGTGAAATCATAGATCAAGAAAGGGACTCATCATTTCTCATACAGCCAAGGGAGCTGACTGAGGATGGGAATGACTCAACAAGCAGATCAAGGAGCAAGAAAGATAGTCAGTGGGAGGATGGTGATTATCAAGAACAAGGGAGGAGCAACAAGCAGACCGCACTTTATGCAGCTGAATCTGAGCCACCAGAGATGTTGGATCAGGTACTGCTCTATCAATATCAAAACTCAGGTTCTTCTCTTCAGGAATCTGATCAGCTTAAAACGAGAAGTGGATTTAGAGGATTAAAAGGCAAAAGAACAGGAAAGAAAAAAATGGATGACAACGGAGCAGTAGTGGATTTTCAGACACTTCTAACTCAATGTGCAAAAGCTGTTGCAAGCTATGACACAAGGACAGCGAATGAACAACTCAAGCTGATAAGGCAGCACTCATCTCCCCATGGTGATGGAACCCAACGATTAGCTCATTACTTTGCCAATGGCCTCGAAGAACGCTTGATCGCTGCGGTTCCCTTGTACAATCCCGTTTCCCTTTTCAGTTATAAGATGTCAGCTGCTGATATCTTGAAAGCTTACCAGACTTATATCAAAGCATGCCCTTTCAAGCTGATGTCAAATATCTACGCTAACAAAACTATTTTCACGCTAGCAGAGAAAGTAACGAGGCTGCACATAATCGATTTTGGTATTCTCTATGGCTACCAATGGCCTTCCCTTATCCAGATGCTTGCGAAAAGACCCTCCGGACCTCCAATGCTTCACATTACTGGTATTGAATTTCCCCAATCAGGATTTCGACCATCTGGGAGGCTTGAAGAGACGGGGAACCGCCTAGCGAAATACTGCAAGAGATTCAATGTCCCGTTTGAGTACAATTTCATAGCACAGAGTTGGGACACAATTCAATATGAAGATATCAAACTTGACAGAGATGAGTTGACTGTAGTGAACTGCTTGTACAGGCTAAAGAACTTACATGATGAAACTGTAATCAACAGTCCAAGGGATACAGTTTTGAAGCTTATCAGGAGAATCAACCCTGATATCTTCATCCATGGAGTGGTTAATGGAGCCTACAATGCACCCTTCTTCAACATACGGTTCCGGGAGGCACTCTACTATTTCTCTTCTTTGTTTGATGTGTTTGAGGAGACTTTGCCCAGAGAAGATCAACAGAGGCTGCTCTACGAACAAGAGATATTTGGTAGAGATATTATCAATGTGATAGCATGTGAGGGTTCCAGGAGGCTTGAAAGGCCTGAAACATACAAGCAGTGGCAGATAAGAAACAGTAGAGCTGGGTTCAAGCAGTTACCATTGAACCAGGAGATCGTGAAGAAAGTTAAGAATATTGTAAGGTTAGATTACCATGAGGACTTTGTTGTGGACAAAGATGGCAAGTGGCTCCTGCAGGGATGGAAAGGCCGAATAATACATGCTATTTGTTGCTGGAAATCTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

672

Amino Acids

76.98

Weight (kDa)

5.66

Isoelectric Point (pI)

57.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 300 - 670 6.9e-117 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000175)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1098
AccB7I CCANNNNNTGG 1 cut(s) 1615
AccIII TCCGGA 1 cut(s) 1298
AciI CCGC 4 cut(s) 438, 711, 1061, 1384
AclWI GGATC 2 cut(s) 110, 759
AcsI RAATTY 3 cut(s) 8, 107, 1331
AcuI CTGAAG 3 cut(s) 45, 266, 779
AfaI GTAC 4 cut(s) 759, 1073, 1427, 1514
AfiI CCNNNNNNNGG 3 cut(s) 62, 1343, 1615
AjnI CCWGG 2 cut(s) 1796, 1878
AjuI GAANNNNNNNTTGG 6 cut(s) 133, 165, 520, 552, 1332, 1364
Alw21I GWGCWC 1 cut(s) 188
Alw26I GTCTC 2 cut(s) 1367, 1700
AlwI GGATC 2 cut(s) 110, 759
AlwNI CAGNNNCTG 3 cut(s) 760, 1112, 1735
Aor13HI TCCGGA 1 cut(s) 1298
AoxI GGCC 5 cut(s) 294, 1036, 1262, 1811, 1978
ApeKI GCWGC 6 cut(s) 722, 979, 1058, 1109, 1222, 1735
ApoI RAATTY 3 cut(s) 8, 107, 1331
Asp700I GAANNNNTTC 2 cut(s) 29, 495
AspS9I GGNCC 2 cut(s) 295, 1301
AsuC2I CCSGG 1 cut(s) 1661
AsuHPI GGTGA 3 cut(s) 353, 686, 1010
AsuNHI GCTAGC 1 cut(s) 1201
AvaII GGWCC 1 cut(s) 1301
BanII GRGCYC 1 cut(s) 188
BauI CACGAG 1 cut(s) 153
BbsI GAAGAC 1 cut(s) 261
Bbv12I GWGCWC 1 cut(s) 188
BbvI GCAGC 6 cut(s) 734, 991, 1045, 1096, 1209, 1722
BccI CCATC 8 cut(s) 139, 449, 611, 665, 995, 1363, 1943, 1965
BciT130I CCWGG 2 cut(s) 1798, 1880
BciVI GTATCC 1 cut(s) 1555
BclI TGATCA 2 cut(s) 91, 805
BcnI CCSGG 1 cut(s) 1661
BcoDI GTCTC 2 cut(s) 1367, 1700
BfaI CTAG 5 cut(s) 332, 441, 488, 1202, 1388
BfmI CTRYAG 2 cut(s) 1497, 1964
BfuI GTATCC 1 cut(s) 1555
BisI GCNGC 7 cut(s) 438, 723, 980, 1059, 1110, 1223, 1736
BlsI GCNGC 7 cut(s) 439, 724, 981, 1060, 1111, 1224, 1737
Bme1390I CCNGG 3 cut(s) 1661, 1798, 1880
Bme18I GGWCC 1 cut(s) 1301
BmgT120I GGNCC 2 cut(s) 295, 1301
BmiI GGNNCC 7 cut(s) 1006, 1065, 1382, 1627, 1658, 1795, 1961
BmrFI CCNGG 3 cut(s) 1661, 1798, 1880
BmrI ACTGGG 2 cut(s) 114, 457
BmsI GCATC 2 cut(s) 231, 1269
BmtI GCTAGC 1 cut(s) 1205
BmuI ACTGGG 2 cut(s) 114, 457
BpiI GAAGAC 1 cut(s) 261
BplI GAGNNNNNCTC 2 cut(s) 188, 220
Bpu10I CCTNAGC 1 cut(s) 460
BpuEI CTTGAG 1 cut(s) 950
BpuMI CCSGG 1 cut(s) 1661
Bsa29I ATCGAT 1 cut(s) 1233
BsaJI CCNNGG 4 cut(s) 599, 994, 1556, 1609
BsaWI WCCGGW 1 cut(s) 1298
BsaXI ACNNNNNCTCC 2 cut(s) 873, 903
Bsc4I CCNNNNNNNGG 3 cut(s) 62, 1343, 1615
Bse1I ACTGG 3 cut(s) 120, 452, 1327
BseAI TCCGGA 1 cut(s) 1298
BseBI CCWGG 2 cut(s) 1798, 1880
BseCI ATCGAT 1 cut(s) 1233
BseDI CCNNGG 4 cut(s) 599, 994, 1556, 1609
BseGI GGATG 8 cut(s) 10, 131, 457, 622, 676, 877, 1605, 1976
BseLI CCNNNNNNNGG 3 cut(s) 62, 1343, 1615
BseMII CTCAG 7 cut(s) 201, 300, 392, 474, 603, 723, 795
BseNI ACTGG 3 cut(s) 120, 452, 1327
BseRI GAGGAG 2 cut(s) 709, 1718
BseXI GCAGC 6 cut(s) 734, 991, 1045, 1096, 1209, 1722
BseYI CCCAGC 1 cut(s) 1853
BsgI GTGCAG 1 cut(s) 1208
BshFI GGCC 5 cut(s) 296, 1038, 1264, 1813, 1980
BshVI ATCGAT 1 cut(s) 1233
BsiHKAI GWGCWC 1 cut(s) 188
BsiSI CCGG 2 cut(s) 1299, 1660
BslFI GGGAC 3 cut(s) 590, 1400, 1463
BslI CCNNNNNNNGG 3 cut(s) 62, 1343, 1615
BsmAI GTCTC 2 cut(s) 1367, 1700
BsmBI CGTCTC 1 cut(s) 1367
BsmFI GGGAC 3 cut(s) 590, 1400, 1463
BsnI GGCC 5 cut(s) 296, 1038, 1264, 1813, 1980
Bsp1286I GDGCHC 1 cut(s) 188
Bsp13I TCCGGA 1 cut(s) 1298
Bsp1407I TGTACA 2 cut(s) 1071, 1512
Bsp143I GATC 9 cut(s) 91, 115, 565, 638, 751, 805, 1053, 1723, 1884
Bsp19I CCATGG 2 cut(s) 994, 1609
BspACI CCGC 4 cut(s) 438, 711, 1061, 1384
BspANI GGCC 5 cut(s) 296, 1038, 1264, 1813, 1980
BspCNI CTCAG 7 cut(s) 200, 301, 391, 473, 604, 724, 794
BspDI ATCGAT 1 cut(s) 1233
BspEI TCCGGA 1 cut(s) 1298
BspHI TCATGA 1 cut(s) 103
BspLI GGNNCC 7 cut(s) 1006, 1065, 1382, 1627, 1658, 1795, 1961
BspMAI CTGCAG 1 cut(s) 1968
BspOI GCTAGC 1 cut(s) 1205
BspPI GGATC 2 cut(s) 110, 759
BsrGI TGTACA 2 cut(s) 1071, 1512
BsrI ACTGG 3 cut(s) 120, 452, 1327
BssECI CCNNGG 4 cut(s) 599, 994, 1556, 1609
BssMI GATC 9 cut(s) 91, 115, 565, 638, 751, 805, 1053, 1723, 1884
BssSI CACGAG 1 cut(s) 153
BssT1I CCWWGG 4 cut(s) 599, 994, 1556, 1609
Bst2BI CACGAG 1 cut(s) 153
Bst2UI CCWGG 2 cut(s) 1798, 1880
Bst4CI ACNGT 7 cut(s) 290, 1498, 1543, 1553, 1567, 1656, 1847
Bst6I CTCTTC 3 cut(s) 798, 1365, 1687
BstAPI GCANNNNNTGC 1 cut(s) 719
BstAUI TGTACA 2 cut(s) 1071, 1512
BstC8I GCNNGC 5 cut(s) 278, 934, 1150, 1203, 1284
BstDEI CTNAG 7 cut(s) 187, 309, 378, 460, 612, 732, 781
BstDSI CCRYGG 2 cut(s) 994, 1609
BstF5I GGATG 8 cut(s) 10, 131, 457, 622, 676, 877, 1605, 1976
BstKTI GATC 9 cut(s) 94, 118, 568, 641, 754, 808, 1056, 1726, 1887
BstMAI GTCTC 2 cut(s) 1367, 1700
BstMBI GATC 9 cut(s) 91, 115, 565, 638, 751, 805, 1053, 1723, 1884
BstMWI GCNNNNNNNGC 7 cut(s) 302, 426, 604, 719, 976, 1634, 1810
BstNI CCWGG 2 cut(s) 1798, 1880
BstNSI RCATGY 4 cut(s) 280, 1152, 1788, 1994
BstSCI CCNGG 3 cut(s) 1659, 1796, 1878
BstSFI CTRYAG 2 cut(s) 1497, 1964
BstV1I GCAGC 6 cut(s) 734, 991, 1045, 1096, 1209, 1722
BstV2I GAAGAC 1 cut(s) 261
BstXI CCANNNNNNTGG 1 cut(s) 1001
Bsu15I ATCGAT 1 cut(s) 1233
BsuI GTATCC 1 cut(s) 1555
BsuRI GGCC 5 cut(s) 296, 1038, 1264, 1813, 1980
BsuTUI ATCGAT 1 cut(s) 1233
BtgI CCRYGG 2 cut(s) 994, 1609
BtsCI GGATG 8 cut(s) 10, 131, 457, 622, 676, 877, 1605, 1976
BtsI GCAGTG 2 cut(s) 432, 1835
BtsIMutI CAGTG 5 cut(s) 118, 306, 432, 668, 1835
Cac8I GCNNGC 5 cut(s) 278, 934, 1150, 1203, 1284
CaiI CAGNNNCTG 3 cut(s) 760, 1112, 1735
CciI TCATGA 1 cut(s) 103
Cfr13I GGNCC 2 cut(s) 295, 1301
ClaI ATCGAT 1 cut(s) 1233
Csp6I GTAC 4 cut(s) 758, 1072, 1426, 1513
CviQI GTAC 4 cut(s) 758, 1072, 1426, 1513
DdeI CTNAG 7 cut(s) 187, 309, 378, 460, 612, 732, 781
DpnI GATC 9 cut(s) 93, 117, 567, 640, 753, 807, 1055, 1725, 1886
DpnII GATC 9 cut(s) 91, 115, 565, 638, 751, 805, 1053, 1723, 1884
Eam1104I CTCTTC 3 cut(s) 798, 1365, 1687
EarI CTCTTC 3 cut(s) 798, 1365, 1687
Ecl136II GAGCTC 1 cut(s) 186
Eco130I CCWWGG 4 cut(s) 599, 994, 1556, 1609
Eco147I AGGCCT 1 cut(s) 1813
Eco24I GRGCYC 1 cut(s) 188
Eco32I GATATC 4 cut(s) 396, 1117, 1471, 1600
Eco47I GGWCC 1 cut(s) 1301
Eco53kI GAGCTC 1 cut(s) 186
Eco57I CTGAAG 3 cut(s) 45, 266, 779
EcoICRI GAGCTC 1 cut(s) 186
EcoRI GAATTC 1 cut(s) 107
EcoRII CCWGG 2 cut(s) 1796, 1878
EcoRV GATATC 4 cut(s) 396, 1117, 1471, 1600
EcoT14I CCWWGG 4 cut(s) 599, 994, 1556, 1609
EcoT38I GRGCYC 1 cut(s) 188
ErhI CCWWGG 4 cut(s) 599, 994, 1556, 1609
Esp3I CGTCTC 1 cut(s) 1367
FaqI GGGAC 3 cut(s) 590, 1400, 1463
FbaI TGATCA 2 cut(s) 91, 805
Fnu4HI GCNGC 7 cut(s) 438, 723, 980, 1059, 1110, 1223, 1736
FokI GGATG 8 cut(s) 17, 118, 464, 629, 683, 884, 1592, 1983
FriOI GRGCYC 1 cut(s) 188
Fsp4HI GCNGC 7 cut(s) 438, 723, 980, 1059, 1110, 1223, 1736
FspBI CTAG 5 cut(s) 332, 441, 488, 1202, 1388
GluI GCNGC 7 cut(s) 438, 723, 980, 1059, 1110, 1223, 1736
GsaI CCCAGC 1 cut(s) 1857
HaeIII GGCC 5 cut(s) 296, 1038, 1264, 1813, 1980
HapII CCGG 2 cut(s) 1299, 1660
HincII GTYRAC 1 cut(s) 1494
HindII GTYRAC 1 cut(s) 1494
HindIII AAGCTT 2 cut(s) 1125, 1574
HinfI GANTC 9 cut(s) 86, 161, 491, 578, 626, 728, 800, 1407, 1587
HpaII CCGG 2 cut(s) 1299, 1660
HphI GGTGA 3 cut(s) 353, 686, 1010
Hpy166II GTNNAC 3 cut(s) 1494, 1504, 1942
Hpy188I TCNGA 8 cut(s) 69, 91, 190, 240, 400, 733, 805, 900
Hpy8I GTNNAC 3 cut(s) 1494, 1504, 1942
HpyAV CCTTC 5 cut(s) 159, 357, 374, 1275, 1651
HpyCH4III ACNGT 7 cut(s) 290, 1498, 1543, 1553, 1567, 1656, 1847
HpyCH4V TGCA 9 cut(s) 262, 276, 722, 920, 932, 1225, 1401, 1637, 1966
HpyF10VI GCNNNNNNNGC 7 cut(s) 302, 426, 604, 719, 976, 1634, 1810
HpyF3I CTNAG 7 cut(s) 187, 309, 378, 460, 612, 732, 781
Kpn2I TCCGGA 1 cut(s) 1298
Ksp22I TGATCA 2 cut(s) 91, 805
Kzo9I GATC 9 cut(s) 91, 115, 565, 638, 751, 805, 1053, 1723, 1884
LmnI GCTCC 7 cut(s) 434, 604, 645, 696, 881, 1625, 1965
Lsp1109I GCAGC 6 cut(s) 734, 991, 1045, 1096, 1209, 1722
LweI GCATC 2 cut(s) 231, 1269
MaeI CTAG 5 cut(s) 332, 441, 488, 1202, 1388
MaeIII GTNAC 3 cut(s) 79, 1213, 1866
MalI GATC 9 cut(s) 93, 117, 567, 640, 753, 807, 1055, 1725, 1886
MboI GATC 9 cut(s) 91, 115, 565, 638, 751, 805, 1053, 1723, 1884
MhlI GDGCHC 1 cut(s) 188
MluCI AATT 6 cut(s) 8, 28, 107, 1331, 1429, 1455
MlyI GAGTC 2 cut(s) 572, 620
MmeI TCCRAC 2 cut(s) 446, 729
MroI TCCGGA 1 cut(s) 1298
MroXI GAANNNNTTC 2 cut(s) 29, 495
MseI TTAA 5 cut(s) 411, 813, 839, 1620, 1899
MslI CAYNNNNRTG 2 cut(s) 102, 999
MspA1I CMGCKG 2 cut(s) 725, 1109
MspI CCGG 2 cut(s) 1299, 1660
MspR9I CCNGG 3 cut(s) 1661, 1798, 1880
MvaI CCWGG 2 cut(s) 1798, 1880
MwoI GCNNNNNNNGC 7 cut(s) 302, 426, 604, 719, 976, 1634, 1810
NciI CCSGG 1 cut(s) 1661
NcoI CCATGG 2 cut(s) 994, 1609
NdeII GATC 9 cut(s) 91, 115, 565, 638, 751, 805, 1053, 1723, 1884
NheI GCTAGC 1 cut(s) 1201
NlaIV GGNNCC 7 cut(s) 1006, 1065, 1382, 1627, 1658, 1795, 1961
NspI RCATGY 4 cut(s) 280, 1152, 1788, 1994
PaeI GCATGC 2 cut(s) 280, 1152
PagI TCATGA 1 cut(s) 103
PceI AGGCCT 1 cut(s) 1813
PdmI GAANNNNTTC 2 cut(s) 29, 495
PfeI GAWTC 7 cut(s) 86, 161, 491, 728, 800, 1407, 1587
PflMI CCANNNNNTGG 1 cut(s) 1615
PfoI TCCNGGA 2 cut(s) 1659, 1796
PkrI GCNGC 7 cut(s) 439, 724, 981, 1060, 1111, 1224, 1737
PleI GAGTC 2 cut(s) 572, 620
PpsI GAGTC 2 cut(s) 572, 620
PsiI TTATAA 1 cut(s) 1098
Psp124BI GAGCTC 1 cut(s) 188
Psp6I CCWGG 2 cut(s) 1796, 1878
PspFI CCCAGC 1 cut(s) 1853
PspGI CCWGG 2 cut(s) 1796, 1878
PspN4I GGNNCC 7 cut(s) 1006, 1065, 1382, 1627, 1658, 1795, 1961
PspPI GGNCC 2 cut(s) 295, 1301
PsrI GAACNNNNNNTAC 2 cut(s) 1496, 1528
PstI CTGCAG 1 cut(s) 1968
PstNI CAGNNNCTG 3 cut(s) 760, 1112, 1735
PvuII CAGCTG 2 cut(s) 725, 1109
RsaI GTAC 4 cut(s) 759, 1073, 1427, 1514
RsaNI GTAC 4 cut(s) 758, 1072, 1426, 1513
RseI CAYNNNNRTG 2 cut(s) 102, 999
SacI GAGCTC 1 cut(s) 188
SaqAI TTAA 5 cut(s) 411, 813, 839, 1620, 1899
SatI GCNGC 7 cut(s) 438, 723, 980, 1059, 1110, 1223, 1736
Sau3AI GATC 9 cut(s) 91, 115, 565, 638, 751, 805, 1053, 1723, 1884
Sau96I GGNCC 2 cut(s) 295, 1301
SbfI CCTGCAGG 1 cut(s) 1968
SchI GAGTC 2 cut(s) 572, 620
ScrFI CCNGG 3 cut(s) 1661, 1798, 1880
SdaI CCTGCAGG 1 cut(s) 1968
SduI GDGCHC 1 cut(s) 188
SfaNI GCATC 2 cut(s) 231, 1269
SfcI CTRYAG 2 cut(s) 1497, 1964
SinI GGWCC 1 cut(s) 1301
SmiMI CAYNNNNRTG 2 cut(s) 102, 999
SmlI CTYRAG 1 cut(s) 965
SmoI CTYRAG 1 cut(s) 965
SphI GCATGC 2 cut(s) 280, 1152
Sse8387I CCTGCAGG 1 cut(s) 1968
Sse9I AATT 6 cut(s) 8, 28, 107, 1331, 1429, 1455
SseBI AGGCCT 1 cut(s) 1813
SsiI CCGC 4 cut(s) 438, 711, 1061, 1384
SspI AATATT 1 cut(s) 1906
SspMI CTAG 5 cut(s) 332, 441, 488, 1202, 1388
SstI GAGCTC 1 cut(s) 188
StuI AGGCCT 1 cut(s) 1813
StyD4I CCNGG 3 cut(s) 1659, 1796, 1878
StyI CCWWGG 4 cut(s) 599, 994, 1556, 1609
TaaI ACNGT 7 cut(s) 290, 1498, 1543, 1553, 1567, 1656, 1847
TaqI TCGA 4 cut(s) 353, 1041, 1233, 1351
TasI AATT 6 cut(s) 8, 28, 107, 1331, 1429, 1455
TatI WGTACW 3 cut(s) 1071, 1425, 1512
TauI GCSGC 1 cut(s) 440
TfiI GAWTC 7 cut(s) 86, 161, 491, 728, 800, 1407, 1587
Tru1I TTAA 5 cut(s) 411, 813, 839, 1620, 1899
Tru9I TTAA 5 cut(s) 411, 813, 839, 1620, 1899
TscAI CASTG 5 cut(s) 118, 313, 439, 668, 1835
TseI GCWGC 6 cut(s) 722, 979, 1058, 1109, 1222, 1735
TspGWI ACGGA 1 cut(s) 894
TspRI CASTG 5 cut(s) 118, 313, 439, 668, 1835
Van91I CCANNNNNTGG 1 cut(s) 1615
VpaK11BI GGWCC 1 cut(s) 1301
XapI RAATTY 3 cut(s) 8, 107, 1331
XbaI TCTAGA 1 cut(s) 487
XceI RCATGY 4 cut(s) 280, 1152, 1788, 1994
XmnI GAANNNNTTC 2 cut(s) 29, 495
XspI CTAG 5 cut(s) 332, 441, 488, 1202, 1388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.