Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0000175

Physical Location & Seq

Genomic Coordinates Reverse (-)

6382830 .. 6384260

Gene Structure 1431 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g08280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

ATGCATCCAGGTCCTGATCTGCGCCCTCCGGGGACTCGCACACTGGTGAGGAGACCGGAGAATTATGGGTACAACTCAACAAATATATTGAAGGGAAAAAAGAATCATCAAAGGGAGGATGTTGATTATCCAGAAGAAGGGAGGAGCAGCAAGCTGCCAGTTGCTTTTGCTGATGACTCTGAGCCGCCGCAAGAAATGTTTGATGAAGTGTTGCTCTGTCATGGGCATCATCGTCTGGGTAACAAGCAGTCAAAAGGGGCTAAAACAACGCGTTCAAAGAAACAGAATAACAACACGGAAATGGTTGATTTGAGAGCATTGCTAACTCAATGTGCACAAGCTGTGGCAAACTATGACCAACGAACTGCAAGTGAACTACTCCAAAAGATACGGCACCACTCTTCCCCCTGTGGTGATGCAAACCAGAGATTAGCTCATTACTTTGCTGATGGCCTAGAGGCACGCTTGGCTGGCGCCACAACCCCAACATACTCTTTTCTTGTTGGTACACAAACATCAACTGCTGACATATTAAAAGCTTATCAGGTGTTTATTTCTTCATCCCCTTTCAAACTCATGTCAAATTTCATGGCCAACAGAACGATTATGAAACTCTCAGAAAACGCAACAAGGCTTCACGTTATTGATTTTGGTATTTCGTATGGTTTCCAATGGCCCTGCTTTATCCAACATCTCTCGGAGAGAACTGGTGGACCTCCTAATCTTCGTATCACAGCAATTGAGCTTCCCCAACCAGGTTTTCGACCTACCGAAAGAGTTGAAGAGACTGCGCGTCGGTTGAAAAAATATGCTGAGAGATTTAATGTTCCATTTGAGTGCAATGTCATTGCTCAGAAATGGGAGACAATCAAATTTGAGGATCTTAGAATTGACAGAAGTGAGCTGACTGTGGTCAATTGTATGTGCCGTTTAAAGCATATACCTGATGAGACGGTGATGGCGAGCAGTCCAAGAGATATTGTGCTAAAGTTGATCAAGAAAATTAATCCAGACGTTTTCATTCATGGGGTTGTCAATGGGACATACAATGCACCCTTCTTTGCCACACGGTTCAGAGAGGCACTTTACCACTACTCTGCATTCTTTGATATCTTTGAGGCCACTGTTCCCCGCGAAGATGAAATGCGTCGGTTGTTTGAAAAAGCAATTTACGGTAGAGACATCGTGAATGTCGTAGCTTGTGAGGGACTGGAAAGAGTTGAAAGGCCTGAGACATACAAGCAGTGGCAGGTTCGGAACGTGAGGGCTGGGTTCAAGCAGCTCCCACTAGACCAAGCTCTTTTGAAGCGAGTGAAGAGAATGTTGAAGTCTTATCATGATGATTTTAGGATTGATGAAGATGGGAACTGGATGTTGCAGTCATGGAGAGGAAGAACTATCTTGGCTCTTTCAATTTGGGTGCCGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

477

Amino Acids

54.8

Weight (kDa)

9.16

Isoelectric Point (pI)

49.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	104 - 473	4.2e-120	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000175)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca	FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica	MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica	Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis	pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis	RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata	RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora	Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa	Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha	Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana	Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1240
AccB1I	GGYRCC	3 cut(s)	393, 473, 1420
AccII	CGCG	3 cut(s)	271, 793, 1134
AciI	CCGC	3 cut(s)	185, 188, 1132
AclWI	GGATC	1 cut(s)	888
AcoI	YGGCCR	1 cut(s)	591
AcsI	RAATTY	2 cut(s)	583, 872
AcyI	GRCGYC	1 cut(s)	474
AfaI	GTAC	2 cut(s)	71, 508
AfiI	CCNNNNNNNGG	2 cut(s)	137, 755
AflIII	ACRYGT	1 cut(s)	269
AhdI	GACNNNNNGTC	1 cut(s)	792
AjnI	CCWGG	2 cut(s)	7, 754
AjuI	GAANNNNNNNTTGG	2 cut(s)	744, 776
AleI	CACNNNNGTG	1 cut(s)	44
AluBI	AGCT	9 cut(s)	154, 341, 434, 539, 745, 904, 1199, 1282, 1298
AluI	AGCT	9 cut(s)	154, 341, 434, 539, 745, 904, 1199, 1282, 1298
Alw21I	GWGCWC	1 cut(s)	337
Alw26I	GTCTC	6 cut(s)	46, 779, 857, 944, 1173, 1226
Alw44I	GTGCAC	1 cut(s)	333
AlwI	GGATC	1 cut(s)	888
AlwNI	CAGNNNCTG	1 cut(s)	14
AoxI	GGCC	6 cut(s)	451, 591, 674, 1119, 1226, 1425
ApaLI	GTGCAC	1 cut(s)	333
ApeKI	GCWGC	3 cut(s)	147, 154, 1279
ApoI	RAATTY	2 cut(s)	583, 872
AseI	ATTAAT	1 cut(s)	1005
AspLEI	GCGC	3 cut(s)	24, 476, 793
AspS9I	GGNCC	3 cut(s)	11, 675, 713
AsuC2I	CCSGG	1 cut(s)	30
AsuHPI	GGTGA	3 cut(s)	58, 425, 967
AvaII	GGWCC	2 cut(s)	11, 713
BaeGI	GKGCMC	1 cut(s)	337
BalI	TGGCCA	1 cut(s)	593
BanI	GGYRCC	3 cut(s)	393, 473, 1420
Bbv12I	GWGCWC	1 cut(s)	337
BbvI	GCAGC	3 cut(s)	141, 159, 1291
BccI	CCATC	3 cut(s)	443, 952, 1355
BceAI	ACGGC	2 cut(s)	407, 912
BciT130I	CCWGG	2 cut(s)	9, 756
BclI	TGATCA	1 cut(s)	993
BcnI	CCSGG	1 cut(s)	30
BcoDI	GTCTC	6 cut(s)	46, 779, 857, 944, 1173, 1226
BfaI	CTAG	3 cut(s)	455, 1289, 1429
BfoI	RGCGCY	1 cut(s)	477
BfuAI	ACCTGC	1 cut(s)	1240
BisI	GCNGC	5 cut(s)	148, 155, 185, 188, 1280
BlsI	GCNGC	5 cut(s)	149, 156, 186, 189, 1281
Bme1390I	CCNGG	3 cut(s)	9, 30, 756
Bme18I	GGWCC	2 cut(s)	11, 713
BmeRI	GACNNNNNGTC	1 cut(s)	792
BmgT120I	GGNCC	3 cut(s)	11, 675, 713
BmiI	GGNNCC	3 cut(s)	395, 475, 1422
BmrFI	CCNGG	3 cut(s)	9, 30, 756
BmsI	GCATC	3 cut(s)	13, 235, 406
BoxI	GACNNNNGTC	1 cut(s)	911
BplI	GAGNNNNNCTC	2 cut(s)	418, 450
BpuMI	CCSGG	1 cut(s)	30
BsaHI	GRCGYC	1 cut(s)	474
BsaI	GGTCTC	1 cut(s)	46
BsaJI	CCNNGG	1 cut(s)	29
BsaWI	WCCGGW	1 cut(s)	55
Bsc4I	CCNNNNNNNGG	2 cut(s)	137, 755
Bse118I	RCCGGY	1 cut(s)	1423
Bse1I	ACTGG	5 cut(s)	48, 158, 712, 1215, 1373
Bse3DI	GCAATG	3 cut(s)	317, 846, 847
BseBI	CCWGG	2 cut(s)	9, 756
BseDI	CCNNGG	1 cut(s)	29
BseGI	GGATG	4 cut(s)	4, 124, 560, 1377
BseLI	CCNNNNNNNGG	2 cut(s)	137, 755
BseMI	GCAATG	3 cut(s)	317, 846, 847
BseMII	CTCAG	5 cut(s)	171, 630, 804, 866, 1221
BseNI	ACTGG	5 cut(s)	48, 158, 712, 1215, 1373
BseRI	GAGGAG	2 cut(s)	64, 157
BseSI	GKGCMC	1 cut(s)	337
BseXI	GCAGC	3 cut(s)	141, 159, 1291
BseYI	CCCAGC	1 cut(s)	1268
Bsh1236I	CGCG	3 cut(s)	271, 793, 1134
BshFI	GGCC	6 cut(s)	453, 593, 676, 1121, 1228, 1427
BshNI	GGYRCC	3 cut(s)	393, 473, 1420
BsiHKAI	GWGCWC	1 cut(s)	337
BsiSI	CCGG	3 cut(s)	29, 56, 1424
BslFI	GGGAC	3 cut(s)	46, 1054, 1221
BslI	CCNNNNNNNGG	2 cut(s)	137, 755
BsmAI	GTCTC	6 cut(s)	46, 779, 857, 944, 1173, 1226
BsmBI	CGTCTC	1 cut(s)	944
BsmFI	GGGAC	3 cut(s)	46, 1054, 1221
BsmI	GAATGC	1 cut(s)	1100
BsnI	GGCC	6 cut(s)	453, 593, 676, 1121, 1228, 1427
Bso31I	GGTCTC	1 cut(s)	46
Bsp1286I	GDGCHC	1 cut(s)	337
Bsp143I	GATC	3 cut(s)	16, 880, 993
BspACI	CCGC	3 cut(s)	185, 188, 1132
BspANI	GGCC	6 cut(s)	453, 593, 676, 1121, 1228, 1427
BspCNI	CTCAG	5 cut(s)	172, 629, 805, 865, 1222
BspFNI	CGCG	3 cut(s)	271, 793, 1134
BspHI	TCATGA	1 cut(s)	1336
BspLI	GGNNCC	3 cut(s)	395, 475, 1422
BspMI	ACCTGC	1 cut(s)	1240
BspPI	GGATC	1 cut(s)	888
BspT107I	GGYRCC	3 cut(s)	393, 473, 1420
BspTNI	GGTCTC	1 cut(s)	46
BsrDI	GCAATG	3 cut(s)	317, 846, 847
BsrFI	RCCGGY	1 cut(s)	1423
BsrI	ACTGG	5 cut(s)	48, 158, 712, 1215, 1373
BssAI	RCCGGY	1 cut(s)	1423
BssECI	CCNNGG	1 cut(s)	29
BssMI	GATC	3 cut(s)	16, 880, 993
BssNI	GRCGYC	1 cut(s)	474
Bst2UI	CCWGG	2 cut(s)	9, 756
Bst4CI	ACNGT	5 cut(s)	910, 955, 1071, 1126, 1175
Bst6I	CTCTTC	3 cut(s)	406, 777, 1310
BstACI	GRCGYC	1 cut(s)	474
BstC8I	GCNNGC	5 cut(s)	152, 463, 472, 964, 1425
BstDEI	CTNAG	6 cut(s)	180, 616, 813, 852, 884, 1230
BstF5I	GGATG	4 cut(s)	4, 124, 560, 1377
BstFNI	CGCG	3 cut(s)	271, 793, 1134
BstH2I	RGCGCY	1 cut(s)	477
BstHHI	GCGC	3 cut(s)	24, 476, 793
BstKTI	GATC	3 cut(s)	19, 883, 996
BstMAI	GTCTC	6 cut(s)	46, 779, 857, 944, 1173, 1226
BstMBI	GATC	3 cut(s)	16, 880, 993
BstMWI	GCNNNNNNNGC	2 cut(s)	467, 471
BstNI	CCWGG	2 cut(s)	9, 756
BstPAI	GACNNNNGTC	1 cut(s)	911
BstSCI	CCNGG	3 cut(s)	7, 28, 754
BstSLI	GKGCMC	1 cut(s)	337
BstUI	CGCG	3 cut(s)	271, 793, 1134
BstV1I	GCAGC	3 cut(s)	141, 159, 1291
BstX2I	RGATCY	1 cut(s)	880
BstYI	RGATCY	1 cut(s)	880
BsuRI	GGCC	6 cut(s)	453, 593, 676, 1121, 1228, 1427
BtsCI	GGATG	4 cut(s)	4, 124, 560, 1377
BtsI	GCAGTG	1 cut(s)	1250
BtsIMutI	CAGTG	3 cut(s)	41, 1122, 1250
BveI	ACCTGC	1 cut(s)	1240
Cac8I	GCNNGC	5 cut(s)	152, 463, 472, 964, 1425
CaiI	CAGNNNCTG	1 cut(s)	14
CciI	TCATGA	1 cut(s)	1336
CfoI	GCGC	3 cut(s)	24, 476, 793
Cfr10I	RCCGGY	1 cut(s)	1423
Cfr13I	GGNCC	3 cut(s)	11, 675, 713
CseI	GACGC	2 cut(s)	782, 1136
CsiI	ACCWGGT	1 cut(s)	754
Csp6I	GTAC	2 cut(s)	70, 507
CviAII	CATG	6 cut(s)	221, 577, 589, 1025, 1337, 1383
CviQI	GTAC	2 cut(s)	70, 507
DdeI	CTNAG	6 cut(s)	180, 616, 813, 852, 884, 1230
DinI	GGCGCC	1 cut(s)	475
DpnI	GATC	3 cut(s)	18, 882, 995
DpnII	GATC	3 cut(s)	16, 880, 993
DraI	TTTAAA	1 cut(s)	933
DriI	GACNNNNNGTC	1 cut(s)	792
EaeI	YGGCCR	1 cut(s)	591
Eam1104I	CTCTTC	3 cut(s)	406, 777, 1310
Eam1105I	GACNNNNNGTC	1 cut(s)	792
EarI	CTCTTC	3 cut(s)	406, 777, 1310
Eco147I	AGGCCT	1 cut(s)	1228
Eco31I	GGTCTC	1 cut(s)	46
Eco32I	GATATC	1 cut(s)	1111
Eco47I	GGWCC	2 cut(s)	11, 713
EcoO109I	RGGNCCY	1 cut(s)	11
EcoRII	CCWGG	2 cut(s)	7, 754
EcoRV	GATATC	1 cut(s)	1111
EcoT22I	ATGCAT	1 cut(s)	6
EgeI	GGCGCC	1 cut(s)	475
EheI	GGCGCC	1 cut(s)	475
Esp3I	CGTCTC	1 cut(s)	944
FaeI	CATG	6 cut(s)	224, 580, 592, 1028, 1340, 1386
FaqI	GGGAC	3 cut(s)	46, 1054, 1221
FatI	CATG	6 cut(s)	220, 576, 588, 1024, 1336, 1382
FauI	CCCGC	1 cut(s)	1139
FbaI	TGATCA	1 cut(s)	993
Fnu4HI	GCNGC	5 cut(s)	148, 155, 185, 188, 1280
FokI	GGATG	3 cut(s)	131, 547, 1384
Fsp4HI	GCNGC	5 cut(s)	148, 155, 185, 188, 1280
FspBI	CTAG	3 cut(s)	455, 1289, 1429
GlaI	GCGC	3 cut(s)	23, 475, 792
GluI	GCNGC	5 cut(s)	148, 155, 185, 188, 1280
GsaI	CCCAGC	1 cut(s)	1272
HaeII	RGCGCY	1 cut(s)	477
HaeIII	GGCC	6 cut(s)	453, 593, 676, 1121, 1228, 1427
HapII	CCGG	3 cut(s)	29, 56, 1424
HgaI	GACGC	2 cut(s)	782, 1136
HhaI	GCGC	3 cut(s)	24, 476, 793
Hin1I	GRCGYC	1 cut(s)	474
Hin1II	CATG	6 cut(s)	224, 580, 592, 1028, 1340, 1386
Hin6I	GCGC	3 cut(s)	22, 474, 791
HinP1I	GCGC	3 cut(s)	22, 474, 791
HindIII	AAGCTT	1 cut(s)	537
HinfI	GANTC	3 cut(s)	34, 103, 176
HpaII	CCGG	3 cut(s)	29, 56, 1424
HphI	GGTGA	3 cut(s)	58, 425, 967
Hpy166II	GTNNAC	4 cut(s)	335, 374, 509, 713
Hpy188I	TCNGA	6 cut(s)	181, 619, 700, 855, 1076, 1257
Hpy188III	TCNNGA	6 cut(s)	14, 131, 997, 1010, 1186, 1337
Hpy8I	GTNNAC	4 cut(s)	335, 374, 509, 713
Hpy99I	CGWCG	2 cut(s)	798, 1152
HpyAV	CCTTC	3 cut(s)	85, 131, 1066
HpyCH4III	ACNGT	5 cut(s)	910, 955, 1071, 1126, 1175
HpyCH4IV	ACGT	3 cut(s)	639, 1014, 1260
HpyCH4V	TGCA	8 cut(s)	4, 335, 368, 419, 840, 1052, 1100, 1378
HpyF10VI	GCNNNNNNNGC	2 cut(s)	467, 471
HpyF3I	CTNAG	6 cut(s)	180, 616, 813, 852, 884, 1230
HpySE526I	ACGT	3 cut(s)	639, 1014, 1260
Hsp92I	GRCGYC	1 cut(s)	474
Hsp92II	CATG	6 cut(s)	224, 580, 592, 1028, 1340, 1386
HspAI	GCGC	3 cut(s)	22, 474, 791
KasI	GGCGCC	1 cut(s)	473
KroI	GCCGGC	1 cut(s)	1423
KroNI	GCCGGC	1 cut(s)	1425
Ksp22I	TGATCA	1 cut(s)	993
Kzo9I	GATC	3 cut(s)	16, 880, 993
LmnI	GCTCC	2 cut(s)	144, 1287
Lsp1109I	GCAGC	3 cut(s)	141, 159, 1291
LweI	GCATC	3 cut(s)	13, 235, 406
MabI	ACCWGGT	1 cut(s)	754
MaeI	CTAG	3 cut(s)	455, 1289, 1429
MaeII	ACGT	3 cut(s)	639, 1014, 1260
MaeIII	GTNAC	1 cut(s)	239
MalI	GATC	3 cut(s)	18, 882, 995
MboI	GATC	3 cut(s)	16, 880, 993
MboII	GAAGA	9 cut(s)	146, 393, 549, 716, 794, 1148, 1327, 1370, 1404
MfeI	CAATTG	2 cut(s)	738, 916
MflI	RGATCY	1 cut(s)	880
MhlI	GDGCHC	1 cut(s)	337
MlsI	TGGCCA	1 cut(s)	593
MluCI	AATT	9 cut(s)	61, 583, 738, 872, 888, 916, 1002, 1167, 1413
MluI	ACGCGT	1 cut(s)	269
MluNI	TGGCCA	1 cut(s)	593
Mly113I	GGCGCC	1 cut(s)	474
MlyI	GAGTC	2 cut(s)	28, 170
MmeI	TCCRAC	1 cut(s)	712
Mox20I	TGGCCA	1 cut(s)	593
Mph1103I	ATGCAT	1 cut(s)	6
MroNI	GCCGGC	1 cut(s)	1423
MscI	TGGCCA	1 cut(s)	593
MseI	TTAA	4 cut(s)	533, 822, 932, 1005
MslI	CAYNNNNRTG	3 cut(s)	44, 299, 835
Msp20I	TGGCCA	1 cut(s)	593
MspI	CCGG	3 cut(s)	29, 56, 1424
MspR9I	CCNGG	3 cut(s)	9, 30, 756
MunI	CAATTG	2 cut(s)	738, 916
Mva1269I	GAATGC	1 cut(s)	1100
MvaI	CCWGG	2 cut(s)	9, 756
MvnI	CGCG	3 cut(s)	271, 793, 1134
MwoI	GCNNNNNNNGC	2 cut(s)	467, 471
NaeI	GCCGGC	1 cut(s)	1425
NarI	GGCGCC	1 cut(s)	474
NciI	CCSGG	1 cut(s)	30
NdeII	GATC	3 cut(s)	16, 880, 993
NgoMIV	GCCGGC	1 cut(s)	1423
NlaIII	CATG	6 cut(s)	224, 580, 592, 1028, 1340, 1386
NlaIV	GGNNCC	3 cut(s)	395, 475, 1422
NsiI	ATGCAT	1 cut(s)	6
OliI	CACNNNNGTG	1 cut(s)	44
PagI	TCATGA	1 cut(s)	1336
PceI	AGGCCT	1 cut(s)	1228
PcsI	WCGNNNNNNNCGW	2 cut(s)	959, 1191
PctI	GAATGC	1 cut(s)	1100
PdiI	GCCGGC	1 cut(s)	1425
PfeI	GAWTC	1 cut(s)	103
PkrI	GCNGC	5 cut(s)	149, 156, 186, 189, 1281
PleI	GAGTC	2 cut(s)	28, 170
PluTI	GGCGCC	1 cut(s)	477
PpsI	GAGTC	2 cut(s)	28, 170
PpuMI	RGGWCCY	1 cut(s)	11
PshAI	GACNNNNGTC	1 cut(s)	911
PshBI	ATTAAT	1 cut(s)	1005
Psp5II	RGGWCCY	1 cut(s)	11
Psp6I	CCWGG	2 cut(s)	7, 754
PspFI	CCCAGC	1 cut(s)	1268
PspGI	CCWGG	2 cut(s)	7, 754
PspN4I	GGNNCC	3 cut(s)	395, 475, 1422
PspPI	GGNCC	3 cut(s)	11, 675, 713
PspPPI	RGGWCCY	1 cut(s)	11
PstNI	CAGNNNCTG	1 cut(s)	14
PsuI	RGATCY	1 cut(s)	880
RsaI	GTAC	2 cut(s)	71, 508
RsaNI	GTAC	2 cut(s)	70, 507
RseI	CAYNNNNRTG	3 cut(s)	44, 299, 835
SaqAI	TTAA	4 cut(s)	533, 822, 932, 1005
SatI	GCNGC	5 cut(s)	148, 155, 185, 188, 1280
Sau3AI	GATC	3 cut(s)	16, 880, 993
Sau96I	GGNCC	3 cut(s)	11, 675, 713
SchI	GAGTC	2 cut(s)	28, 170
ScrFI	CCNGG	3 cut(s)	9, 30, 756
SduI	GDGCHC	1 cut(s)	337
SexAI	ACCWGGT	1 cut(s)	754
SfaNI	GCATC	3 cut(s)	13, 235, 406
SfoI	GGCGCC	1 cut(s)	475
SinI	GGWCC	2 cut(s)	11, 713
SmiMI	CAYNNNNRTG	3 cut(s)	44, 299, 835
Sse9I	AATT	9 cut(s)	61, 583, 738, 872, 888, 916, 1002, 1167, 1413
SseBI	AGGCCT	1 cut(s)	1228
SsiI	CCGC	3 cut(s)	185, 188, 1132
SspDI	GGCGCC	1 cut(s)	473
SspMI	CTAG	3 cut(s)	455, 1289, 1429
StuI	AGGCCT	1 cut(s)	1228
StyD4I	CCNGG	3 cut(s)	7, 28, 754
TaaI	ACNGT	5 cut(s)	910, 955, 1071, 1126, 1175
TaiI	ACGT	3 cut(s)	642, 1017, 1263
TaqI	TCGA	1 cut(s)	763
TasI	AATT	9 cut(s)	61, 583, 738, 872, 888, 916, 1002, 1167, 1413
TauI	GCSGC	2 cut(s)	187, 190
TfiI	GAWTC	1 cut(s)	103
Tru1I	TTAA	4 cut(s)	533, 822, 932, 1005
Tru9I	TTAA	4 cut(s)	533, 822, 932, 1005
TscAI	CASTG	3 cut(s)	48, 1129, 1250
TseI	GCWGC	3 cut(s)	147, 154, 1279
TspDTI	ATGAA	8 cut(s)	219, 549, 577, 623, 1009, 1013, 1155, 1371
TspGWI	ACGGA	1 cut(s)	311
TspRI	CASTG	3 cut(s)	48, 1129, 1250
VneI	GTGCAC	1 cut(s)	333
VpaK11BI	GGWCC	2 cut(s)	11, 713
VspI	ATTAAT	1 cut(s)	1005
XapI	RAATTY	2 cut(s)	583, 872
XspI	CTAG	3 cut(s)	455, 1289, 1429
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.