Reverse transcriptase (RNA-dependent DNA polymerase)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 461 |
| AciI | CCGC | 1 cut(s) | 509 |
| AfaI | GTAC | 2 cut(s) | 11, 161 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 461 |
| AgsI | TTSAA | 3 cut(s) | 32, 524, 541 |
| AluBI | AGCT | 6 cut(s) | 86, 168, 393, 399, 488, 545 |
| AluI | AGCT | 6 cut(s) | 86, 168, 393, 399, 488, 545 |
| Alw26I | GTCTC | 1 cut(s) | 272 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 491 |
| ApeKI | GCWGC | 2 cut(s) | 86, 485 |
| AspS9I | GGNCC | 1 cut(s) | 410 |
| AvaII | GGWCC | 1 cut(s) | 410 |
| BbsI | GAAGAC | 1 cut(s) | 42 |
| BbvI | GCAGC | 2 cut(s) | 73, 497 |
| BccI | CCATC | 1 cut(s) | 316 |
| BcoDI | GTCTC | 1 cut(s) | 272 |
| BfaI | CTAG | 2 cut(s) | 41, 341 |
| BfmI | CTRYAG | 1 cut(s) | 394 |
| BisI | GCNGC | 3 cut(s) | 87, 486, 509 |
| BlsI | GCNGC | 3 cut(s) | 88, 487, 510 |
| Bme18I | GGWCC | 1 cut(s) | 410 |
| BmgT120I | GGNCC | 1 cut(s) | 410 |
| BpiI | GAAGAC | 1 cut(s) | 42 |
| Bpu10I | CCTNAGC | 1 cut(s) | 495 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 461 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 461 |
| BseMII | CTCAG | 3 cut(s) | 192, 332, 509 |
| BseRI | GAGGAG | 1 cut(s) | 101 |
| BseXI | GCAGC | 2 cut(s) | 73, 497 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 461 |
| BsmAI | GTCTC | 1 cut(s) | 272 |
| Bsp143I | GATC | 1 cut(s) | 106 |
| BspACI | CCGC | 1 cut(s) | 509 |
| BspCNI | CTCAG | 3 cut(s) | 191, 331, 508 |
| BssMI | GATC | 1 cut(s) | 106 |
| Bst4CI | ACNGT | 1 cut(s) | 71 |
| Bst6I | CTCTTC | 1 cut(s) | 30 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 491 |
| BstDEI | CTNAG | 5 cut(s) | 178, 240, 318, 495, 546 |
| BstKTI | GATC | 1 cut(s) | 109 |
| BstMAI | GTCTC | 1 cut(s) | 272 |
| BstMBI | GATC | 1 cut(s) | 106 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 83, 491 |
| BstNSI | RCATGY | 1 cut(s) | 61 |
| BstSFI | CTRYAG | 1 cut(s) | 394 |
| BstV1I | GCAGC | 2 cut(s) | 73, 497 |
| BstV2I | GAAGAC | 1 cut(s) | 42 |
| CaiI | CAGNNNCTG | 1 cut(s) | 491 |
| Cfr13I | GGNCC | 1 cut(s) | 410 |
| Csp6I | GTAC | 2 cut(s) | 10, 160 |
| CviAII | CATG | 2 cut(s) | 58, 257 |
| CviJI | RGCY | 9 cut(s) | 86, 168, 219, 379, 393, 399, 488, 508, 545 |
| CviKI_1 | RGCY | 9 cut(s) | 86, 168, 219, 379, 393, 399, 488, 508, 545 |
| CviQI | GTAC | 2 cut(s) | 10, 160 |
| DdeI | CTNAG | 5 cut(s) | 178, 240, 318, 495, 546 |
| DpnI | GATC | 1 cut(s) | 108 |
| DpnII | GATC | 1 cut(s) | 106 |
| Eam1104I | CTCTTC | 1 cut(s) | 30 |
| EarI | CTCTTC | 1 cut(s) | 30 |
| Eco47I | GGWCC | 1 cut(s) | 410 |
| FaeI | CATG | 2 cut(s) | 61, 260 |
| FaiI | YATR | 8 cut(s) | 14, 59, 105, 207, 258, 284, 375, 457 |
| FatI | CATG | 2 cut(s) | 57, 256 |
| Fnu4HI | GCNGC | 3 cut(s) | 87, 486, 509 |
| Fsp4HI | GCNGC | 3 cut(s) | 87, 486, 509 |
| FspBI | CTAG | 2 cut(s) | 41, 341 |
| GluI | GCNGC | 3 cut(s) | 87, 486, 509 |
| Hin1II | CATG | 2 cut(s) | 61, 260 |
| HindIII | AAGCTT | 2 cut(s) | 166, 543 |
| HinfI | GANTC | 2 cut(s) | 188, 263 |
| Hpy166II | GTNNAC | 2 cut(s) | 50, 160 |
| Hpy188I | TCNGA | 3 cut(s) | 181, 289, 321 |
| Hpy188III | TCNNGA | 3 cut(s) | 29, 497, 538 |
| Hpy8I | GTNNAC | 2 cut(s) | 50, 160 |
| HpyAV | CCTTC | 1 cut(s) | 141 |
| HpyCH4III | ACNGT | 1 cut(s) | 71 |
| HpyCH4V | TGCA | 2 cut(s) | 57, 64 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 83, 491 |
| HpyF3I | CTNAG | 5 cut(s) | 178, 240, 318, 495, 546 |
| Hsp92II | CATG | 2 cut(s) | 61, 260 |
| Kzo9I | GATC | 1 cut(s) | 106 |
| LpnPI | CCDG | 3 cut(s) | 243, 393, 482 |
| Lsp1109I | GCAGC | 2 cut(s) | 73, 497 |
| MaeI | CTAG | 2 cut(s) | 41, 341 |
| MaeIII | GTNAC | 1 cut(s) | 232 |
| MalI | GATC | 1 cut(s) | 108 |
| MboI | GATC | 1 cut(s) | 106 |
| MboII | GAAGA | 4 cut(s) | 17, 44, 47, 258 |
| MnlI | CCTC | 4 cut(s) | 37, 122, 156, 433 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 83, 491 |
| NdeII | GATC | 1 cut(s) | 106 |
| NlaIII | CATG | 2 cut(s) | 61, 260 |
| NmeAIII | GCCGAG | 1 cut(s) | 301 |
| NspI | RCATGY | 1 cut(s) | 61 |
| PfeI | GAWTC | 2 cut(s) | 188, 263 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 461 |
| PkrI | GCNGC | 3 cut(s) | 88, 487, 510 |
| PspPI | GGNCC | 1 cut(s) | 410 |
| PstNI | CAGNNNCTG | 1 cut(s) | 491 |
| RsaI | GTAC | 2 cut(s) | 11, 161 |
| RsaNI | GTAC | 2 cut(s) | 10, 160 |
| SatI | GCNGC | 3 cut(s) | 87, 486, 509 |
| Sau3AI | GATC | 1 cut(s) | 106 |
| Sau96I | GGNCC | 1 cut(s) | 410 |
| SfcI | CTRYAG | 1 cut(s) | 394 |
| SinI | GGWCC | 1 cut(s) | 410 |
| SmlI | CTYRAG | 1 cut(s) | 5 |
| SmoI | CTYRAG | 1 cut(s) | 5 |
| SsiI | CCGC | 1 cut(s) | 509 |
| SspMI | CTAG | 2 cut(s) | 41, 341 |
| TaaI | ACNGT | 1 cut(s) | 71 |
| TaqI | TCGA | 1 cut(s) | 261 |
| TatI | WGTACW | 1 cut(s) | 9 |
| TauI | GCSGC | 1 cut(s) | 511 |
| TfiI | GAWTC | 2 cut(s) | 188, 263 |
| TseI | GCWGC | 2 cut(s) | 86, 485 |
| TspDTI | ATGAA | 2 cut(s) | 123, 245 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 461 |
| VpaK11BI | GGWCC | 1 cut(s) | 410 |
| XceI | RCATGY | 1 cut(s) | 61 |
| XspI | CTAG | 2 cut(s) | 41, 341 |