Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000175

Physical Location & Seq

Genomic Coordinates Forward (+)

71760123 .. 71762479

Gene Structure 2357 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34165

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGATACCCTTTTTGATAGATTTTCTGGTCGCATAGAGGGACTTTATTTTGGCCATGCCCCAACTTCAACTTTCAATCCAAATCTTGCAGACGGGTGCAAAGTCACTCAGGAATCCACCAATACACTTATCTATCCAGCTAACTTAGACTATCCAAGTGATTTGAGTAAGTCTTTGAGCCCAGATTCTGAGGAAGAAACTGTTGATGTTAGTTACTCCAACAATCCTGTTATCAAGTACATAAGTGATATTCTTCTGGAGGAAGACCTGGAGGACGAGAGCTGCATGCTGCAGGACTATTTGGCCGTCCAAGCTGCTGAAAAATCTTTCTATGATGTCCTTAATCCGAATGATCCTCATTCACCCAACAAGGCTTCTCTTGGTGAATCATTTTCAGATGCTCTTTTGGTTTCAGATTCACTTTTTGAGAGGCAGAGTCTTGGAAATTTTGGAAATGTCGGGGAGGCAAACAAGGTCCTTCCTAATGGGGAATTCGATATCATTGACAAGGAGAGGTACGAATTACTGCCTGTAGCACGTTCTAACCTGGTGAAAAGGAATCTGGCATCCGATAAAAAAAATGATGTAAACAACCCAACAGATGGTATGAAGGGAAAGAAAAATCATCACAGAGAGGATGGAGATTATCCAGAGGAAGGGAGAAGCAGCAAGCAGTCAGTTGTTTCTGCTGATGACTCTGAGCCTCAAGAAATGTTTGATAAGGTGTTACTCTGTCAAGCTGAGCATCATCATCGGGAGTGGGAATCTTGTACGCCTCATTGCTCTATGAAAAGGGAGGAAACAGAGCAGTTGCAGCAAAACAGGCAGCCTAAAGGATCTAAAACAAATCGTTCAAAGCGACAAAATAAAGATGAGGAAGGAATAGATTTGACCACCATGCTAAATCAATGTGCACAAGCCGTGGCAAGCTATGAACAAGGAACGGCGAGTAAACTACTCAAGAAGATGAGGCAGCACTCCTCCCCCCATGGACATGCAACTCAGAGATTAGCTCACTACTTTGCCAATGGCCTAGAGGCGCGGCTTACTGGTGTCGGAACCCCATCATTTTCACCTCTCTTTAGTAGGCAGACATCAGCCGCTGAATACTTACTAGCTTACCAGGTATATACTACTTCATGCCCTTTCAAGATGATGTCACAATTATTTGCCAACAGAACAATCATGAAGCTAGCAAAAAATGAAACAAGGCTTCACATTATTGATTTTGGTATTTCTTATGGTTTCCAATGGCCCTTCCTTATCCAACATCTCTCCGAGAGACCTAATGGACCTCCCAAGTTACACATTACAGGAATTGAGCTTCCGCAACCTGGTTTTCGACCTAGAGAAAGGGTTGAAGAGACCGGGCGTCGCCTAGCAAGGTATTGTGCAAAGTTCAATGTCCCGTTTGAGTACGATCTCATTGTTCAAAGATGGGAAACCATACAATGTGAGGATCTTAAAATTGACCGAAACGAACTGGTAGTGGTCAATTGTCTGAACCGGTTAAAGCACATACATGATGAGACGGTGATGGAGAACTCTCCGAGAGATACTGTCCTGAATTTGATCAAGAATATAGATCCCCACCTTTTCATTCATGGGATTGTCAATGGGACGTACAATACACCCTTCTTTGCCACACGGTTCAAAGAGGCACTCTTGCACTACTATGCCGTGTTTGATATGTTTGAAGCAACTATTCCTCGTGAAGATGAACGGCGGATGATTATCGAGAGAGAAAAATGTGGTAGAGACATGATGAATATCGTAGCATGCGAGGGAGTGGAAAGGTTTGAAAGACCTGAGACATATAAGAAATGGCAGATCAGGAATGTGAGGGCTGGGTTGAAGCAGCTCCCGTTGGACCAGGAGGAGTTGAAGAAAGTGAAGAACTTGTATAAGGGTTATCATAATGATTTTAGAGTTGAAGAAGATGGGCAGTGGATACTGCAGGGATGGAAAGGAAGGATCCTCCGGGCTCTGTCACTTTGGACTCCTGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

669

Amino Acids

76.9

Weight (kDa)

5.9

Isoelectric Point (pI)

50.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	298 - 667	1.1e-115	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000175)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca	FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica	MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica	Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis	pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis	RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata	RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora	Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa	Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha	Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana	Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	602
AccII	CGCG	1 cut(s)	1042
AciI	CCGC	4 cut(s)	1042, 1101, 1328, 1726
AclWI	GGATC	6 cut(s)	347, 844, 1467, 1580, 1969, 1982
AcoI	YGGCCR	2 cut(s)	52, 303
AcsI	RAATTY	3 cut(s)	445, 491, 1567
AcyI	GRCGYC	1 cut(s)	1372
AfaI	GTAC	5 cut(s)	239, 518, 772, 1418, 1625
AfiI	CCNNNNNNNGG	3 cut(s)	602, 656, 1334
AgeI	ACCGGT	1 cut(s)	1506
AhdI	GACNNNNNGTC	1 cut(s)	1371
AjnI	CCWGG	5 cut(s)	267, 546, 1122, 1333, 1872
Alw21I	GWGCWC	1 cut(s)	916
Alw26I	GTCTC	5 cut(s)	1276, 1358, 1523, 1752, 1805
Alw44I	GTGCAC	1 cut(s)	912
AlwI	GGATC	6 cut(s)	347, 844, 1467, 1580, 1969, 1982
AlwNI	CAGNNNCTG	2 cut(s)	188, 1103
AoxI	GGCC	4 cut(s)	52, 303, 1030, 1253
ApaLI	GTGCAC	1 cut(s)	912
ApeKI	GCWGC	8 cut(s)	282, 289, 314, 666, 814, 826, 973, 1858
ApoI	RAATTY	3 cut(s)	445, 491, 1567
AsiGI	ACCGGT	1 cut(s)	1506
AspLEI	GCGC	1 cut(s)	1042
AspS9I	GGNCC	4 cut(s)	475, 1254, 1292, 1870
AsuC2I	CCSGG	2 cut(s)	1369, 1982
AsuHPI	GGTGA	5 cut(s)	354, 395, 562, 1065, 1546
AsuNHI	GCTAGC	1 cut(s)	1192
AvaII	GGWCC	3 cut(s)	475, 1292, 1870
BaeGI	GKGCMC	1 cut(s)	916
BalI	TGGCCA	1 cut(s)	54
BamHI	GGATCC	1 cut(s)	1974
BanII	GRGCYC	2 cut(s)	182, 1987
BauI	CACGAG	1 cut(s)	1710
BbsI	GAAGAC	1 cut(s)	270
Bbv12I	GWGCWC	1 cut(s)	916
BbvI	GCAGC	8 cut(s)	269, 276, 301, 678, 826, 838, 985, 1870
BccI	CCATC	7 cut(s)	596, 632, 1072, 1431, 1531, 1934, 1956
BceAI	ACGGC	5 cut(s)	290, 905, 960, 1664, 1739
BcgI	CGANNNNNNTGC	2 cut(s)	734, 768
BciT130I	CCWGG	5 cut(s)	269, 548, 1124, 1335, 1874
BciVI	GTATCC	1 cut(s)	1944
BclI	TGATCA	1 cut(s)	1572
BcnI	CCSGG	2 cut(s)	1369, 1982
BcoDI	GTCTC	5 cut(s)	1276, 1358, 1523, 1752, 1805
BfaI	CTAG	6 cut(s)	1034, 1115, 1193, 1347, 1379, 2008
BfmI	CTRYAG	3 cut(s)	290, 531, 1955
BfuI	GTATCC	1 cut(s)	1944
BlpI	GCTNAGC	1 cut(s)	741
Bme1390I	CCNGG	7 cut(s)	269, 548, 1124, 1335, 1369, 1874, 1982
Bme18I	GGWCC	3 cut(s)	475, 1292, 1870
BmeRI	GACNNNNNGTC	1 cut(s)	1371
BmgT120I	GGNCC	4 cut(s)	475, 1254, 1292, 1870
BmiI	GGNNCC	2 cut(s)	1060, 1976
BmrFI	CCNGG	7 cut(s)	269, 548, 1124, 1335, 1369, 1874, 1982
BmsI	GCATC	3 cut(s)	388, 575, 754
BmtI	GCTAGC	1 cut(s)	1196
BpiI	GAAGAC	1 cut(s)	270
BplI	GAGNNNNNCTC	2 cut(s)	997, 1029
BpmI	CTGGAG	2 cut(s)	278, 290
Bpu1102I	GCTNAGC	1 cut(s)	741
BpuEI	CTTGAG	2 cut(s)	690, 944
BpuMI	CCSGG	2 cut(s)	1369, 1982
BsaBI	GATNNNNATC	2 cut(s)	1733, 1769
BsaHI	GRCGYC	1 cut(s)	1372
BsaI	GGTCTC	2 cut(s)	1276, 1358
BsaJI	CCNNGG	2 cut(s)	921, 988
BsaWI	WCCGGW	1 cut(s)	1506
Bsc4I	CCNNNNNNNGG	3 cut(s)	602, 656, 1334
Bse118I	RCCGGY	1 cut(s)	1506
Bse1I	ACTGG	2 cut(s)	1054, 1488
Bse3DI	GCAATG	1 cut(s)	778
Bse8I	GATNNNNATC	2 cut(s)	1733, 1769
BseBI	CCWGG	5 cut(s)	269, 548, 1124, 1335, 1874
BseDI	CCNNGG	2 cut(s)	921, 988
BseGI	GGATG	4 cut(s)	566, 643, 1734, 1967
BseJI	GATNNNNATC	2 cut(s)	1733, 1769
BseLI	CCNNNNNNNGG	3 cut(s)	602, 656, 1334
BseMI	GCAATG	1 cut(s)	778
BseMII	CTCAG	6 cut(s)	122, 180, 690, 732, 1016, 1800
BseNI	ACTGG	2 cut(s)	1054, 1488
BseRI	GAGGAG	2 cut(s)	970, 1892
BseSI	GKGCMC	1 cut(s)	916
BseXI	GCAGC	8 cut(s)	269, 276, 301, 678, 826, 838, 985, 1870
BseYI	CCCAGC	1 cut(s)	1847
Bsh1236I	CGCG	1 cut(s)	1042
BshFI	GGCC	4 cut(s)	54, 305, 1032, 1255
BshTI	ACCGGT	1 cut(s)	1506
BsiHKAI	GWGCWC	1 cut(s)	916
BsiSI	CCGG	3 cut(s)	1368, 1507, 1981
BslFI	GGGAC	3 cut(s)	54, 1391, 1633
BslI	CCNNNNNNNGG	3 cut(s)	602, 656, 1334
BsmAI	GTCTC	5 cut(s)	1276, 1358, 1523, 1752, 1805
BsmBI	CGTCTC	1 cut(s)	1523
BsmFI	GGGAC	3 cut(s)	54, 1391, 1633
BsnI	GGCC	4 cut(s)	54, 305, 1032, 1255
Bso31I	GGTCTC	2 cut(s)	1276, 1358
Bsp1286I	GDGCHC	3 cut(s)	182, 916, 1987
Bsp143I	GATC	8 cut(s)	352, 836, 1420, 1459, 1572, 1585, 1830, 1974
Bsp1720I	GCTNAGC	1 cut(s)	741
Bsp19I	CCATGG	1 cut(s)	988
BspACI	CCGC	4 cut(s)	1042, 1101, 1328, 1726
BspANI	GGCC	4 cut(s)	54, 305, 1032, 1255
BspCNI	CTCAG	6 cut(s)	121, 181, 691, 733, 1015, 1801
BspFNI	CGCG	1 cut(s)	1042
BspHI	TCATGA	1 cut(s)	1185
BspLI	GGNNCC	2 cut(s)	1060, 1976
BspMAI	CTGCAG	2 cut(s)	294, 1959
BspOI	GCTAGC	1 cut(s)	1196
BspPI	GGATC	6 cut(s)	347, 844, 1467, 1580, 1969, 1982
BspTNI	GGTCTC	2 cut(s)	1276, 1358
BsrDI	GCAATG	1 cut(s)	778
BsrFI	RCCGGY	1 cut(s)	1506
BsrI	ACTGG	2 cut(s)	1054, 1488
BssAI	RCCGGY	1 cut(s)	1506
BssECI	CCNNGG	2 cut(s)	921, 988
BssMI	GATC	8 cut(s)	352, 836, 1420, 1459, 1572, 1585, 1830, 1974
BssNI	GRCGYC	1 cut(s)	1372
BssSI	CACGAG	1 cut(s)	1710
BssT1I	CCWWGG	1 cut(s)	988
Bst2BI	CACGAG	1 cut(s)	1710
Bst2UI	CCWGG	5 cut(s)	269, 548, 1124, 1335, 1874
Bst4CI	ACNGT	4 cut(s)	202, 1534, 1561, 1650
Bst6I	CTCTTC	1 cut(s)	1356
BstACI	GRCGYC	1 cut(s)	1372
BstC8I	GCNNGC	5 cut(s)	287, 671, 928, 1194, 1780
BstDEI	CTNAG	7 cut(s)	108, 145, 189, 699, 741, 1002, 1809
BstDSI	CCRYGG	2 cut(s)	921, 988
BstF5I	GGATG	4 cut(s)	566, 643, 1734, 1967
BstFNI	CGCG	1 cut(s)	1042
BstHHI	GCGC	1 cut(s)	1042
BstKTI	GATC	8 cut(s)	355, 839, 1423, 1462, 1575, 1588, 1833, 1977
BstMAI	GTCTC	5 cut(s)	1276, 1358, 1523, 1752, 1805
BstMBI	GATC	8 cut(s)	352, 836, 1420, 1459, 1572, 1585, 1830, 1974
BstMWI	GCNNNNNNNGC	3 cut(s)	311, 814, 823
BstNI	CCWGG	5 cut(s)	269, 548, 1124, 1335, 1874
BstNSI	RCATGY	3 cut(s)	289, 998, 1782
BstSCI	CCNGG	7 cut(s)	267, 546, 1122, 1333, 1367, 1872, 1980
BstSFI	CTRYAG	3 cut(s)	290, 531, 1955
BstSLI	GKGCMC	1 cut(s)	916
BstUI	CGCG	1 cut(s)	1042
BstV1I	GCAGC	8 cut(s)	269, 276, 301, 678, 826, 838, 985, 1870
BstV2I	GAAGAC	1 cut(s)	270
BstX2I	RGATCY	4 cut(s)	836, 1459, 1585, 1974
BstYI	RGATCY	4 cut(s)	836, 1459, 1585, 1974
BsuI	GTATCC	1 cut(s)	1944
BsuRI	GGCC	4 cut(s)	54, 305, 1032, 1255
BtgI	CCRYGG	2 cut(s)	921, 988
BtsCI	GGATG	4 cut(s)	566, 643, 1734, 1967
BtsI	GCAGTG	1 cut(s)	1952
BtsIMutI	CAGTG	1 cut(s)	1952
Cac8I	GCNNGC	5 cut(s)	287, 671, 928, 1194, 1780
CaiI	CAGNNNCTG	2 cut(s)	188, 1103
CciI	TCATGA	1 cut(s)	1185
CfoI	GCGC	1 cut(s)	1042
Cfr10I	RCCGGY	1 cut(s)	1506
Cfr13I	GGNCC	4 cut(s)	475, 1254, 1292, 1870
CseI	GACGC	1 cut(s)	1361
CsiI	ACCWGGT	3 cut(s)	546, 1122, 1333
Csp6I	GTAC	5 cut(s)	238, 517, 771, 1417, 1624
CspAI	ACCGGT	1 cut(s)	1506
CviQI	GTAC	5 cut(s)	238, 517, 771, 1417, 1624
DdeI	CTNAG	7 cut(s)	108, 145, 189, 699, 741, 1002, 1809
DpnI	GATC	8 cut(s)	354, 838, 1422, 1461, 1574, 1587, 1832, 1976
DpnII	GATC	8 cut(s)	352, 836, 1420, 1459, 1572, 1585, 1830, 1974
DriI	GACNNNNNGTC	1 cut(s)	1371
EaeI	YGGCCR	2 cut(s)	52, 303
Eam1104I	CTCTTC	1 cut(s)	1356
Eam1105I	GACNNNNNGTC	1 cut(s)	1371
EarI	CTCTTC	1 cut(s)	1356
EciI	GGCGGA	1 cut(s)	1741
Eco130I	CCWWGG	1 cut(s)	988
Eco24I	GRGCYC	2 cut(s)	182, 1987
Eco31I	GGTCTC	2 cut(s)	1276, 1358
Eco32I	GATATC	1 cut(s)	499
Eco47I	GGWCC	3 cut(s)	475, 1292, 1870
EcoO109I	RGGNCCY	1 cut(s)	475
EcoRI	GAATTC	1 cut(s)	491
EcoRII	CCWGG	5 cut(s)	267, 546, 1122, 1333, 1872
EcoRV	GATATC	1 cut(s)	499
EcoT14I	CCWWGG	1 cut(s)	988
EcoT38I	GRGCYC	2 cut(s)	182, 1987
ErhI	CCWWGG	1 cut(s)	988
Esp3I	CGTCTC	1 cut(s)	1523
FaqI	GGGAC	3 cut(s)	54, 1391, 1633
FbaI	TGATCA	1 cut(s)	1572
FokI	GGATG	4 cut(s)	553, 650, 1741, 1974
FriOI	GRGCYC	2 cut(s)	182, 1987
FspBI	CTAG	6 cut(s)	1034, 1115, 1193, 1347, 1379, 2008
GlaI	GCGC	1 cut(s)	1041
GsaI	CCCAGC	1 cut(s)	1851
GsuI	CTGGAG	2 cut(s)	278, 290
HaeIII	GGCC	4 cut(s)	54, 305, 1032, 1255
HapII	CCGG	3 cut(s)	1368, 1507, 1981
HgaI	GACGC	1 cut(s)	1361
HhaI	GCGC	1 cut(s)	1042
Hin1I	GRCGYC	1 cut(s)	1372
Hin6I	GCGC	1 cut(s)	1040
HinP1I	GCGC	1 cut(s)	1040
HinfI	GANTC	9 cut(s)	113, 185, 386, 416, 436, 559, 695, 764, 1999
HpaII	CCGG	3 cut(s)	1368, 1507, 1981
HphI	GGTGA	5 cut(s)	354, 395, 562, 1065, 1546
Hpy166II	GTNNAC	3 cut(s)	589, 914, 953
Hpy8I	GTNNAC	3 cut(s)	589, 914, 953
Hpy99I	CGWCG	1 cut(s)	1377
HpyAV	CCTTC	7 cut(s)	488, 604, 650, 872, 1267, 1645, 1965
HpyCH4III	ACNGT	4 cut(s)	202, 1534, 1561, 1650
HpyCH4IV	ACGT	2 cut(s)	538, 1622
HpyF10VI	GCNNNNNNNGC	3 cut(s)	311, 814, 823
HpyF3I	CTNAG	7 cut(s)	108, 145, 189, 699, 741, 1002, 1809
HpySE526I	ACGT	2 cut(s)	538, 1622
Hsp92I	GRCGYC	1 cut(s)	1372
HspAI	GCGC	1 cut(s)	1040
Ksp22I	TGATCA	1 cut(s)	1572
Kzo9I	GATC	8 cut(s)	352, 836, 1420, 1459, 1572, 1585, 1830, 1974
LmnI	GCTCC	1 cut(s)	1866
Lsp1109I	GCAGC	8 cut(s)	269, 276, 301, 678, 826, 838, 985, 1870
LweI	GCATC	3 cut(s)	388, 575, 754
MabI	ACCWGGT	3 cut(s)	546, 1122, 1333
MaeI	CTAG	6 cut(s)	1034, 1115, 1193, 1347, 1379, 2008
MaeII	ACGT	2 cut(s)	538, 1622
MaeIII	GTNAC	6 cut(s)	103, 212, 726, 1158, 1302, 1989
MalI	GATC	8 cut(s)	354, 838, 1422, 1461, 1574, 1587, 1832, 1976
MboI	GATC	8 cut(s)	352, 836, 1420, 1459, 1572, 1585, 1830, 1974
MfeI	CAATTG	1 cut(s)	1495
MflI	RGATCY	4 cut(s)	836, 1459, 1585, 1974
MhlI	GDGCHC	3 cut(s)	182, 916, 1987
MlsI	TGGCCA	1 cut(s)	54
MluCI	AATT	8 cut(s)	445, 491, 521, 1163, 1317, 1467, 1495, 1567
MluNI	TGGCCA	1 cut(s)	54
MlyI	GAGTC	3 cut(s)	445, 689, 1993
MmeI	TCCRAC	4 cut(s)	243, 1036, 1291, 1848
Mox20I	TGGCCA	1 cut(s)	54
MscI	TGGCCA	1 cut(s)	54
MseI	TTAA	3 cut(s)	342, 1464, 1511
MslI	CAYNNNNRTG	3 cut(s)	993, 1521, 1674
Msp20I	TGGCCA	1 cut(s)	54
MspA1I	CMGCKG	1 cut(s)	1103
MspI	CCGG	3 cut(s)	1368, 1507, 1981
MspR9I	CCNGG	7 cut(s)	269, 548, 1124, 1335, 1369, 1874, 1982
MunI	CAATTG	1 cut(s)	1495
MvaI	CCWGG	5 cut(s)	269, 548, 1124, 1335, 1874
MvnI	CGCG	1 cut(s)	1042
MwoI	GCNNNNNNNGC	3 cut(s)	311, 814, 823
NciI	CCSGG	2 cut(s)	1369, 1982
NcoI	CCATGG	1 cut(s)	988
NdeII	GATC	8 cut(s)	352, 836, 1420, 1459, 1572, 1585, 1830, 1974
NheI	GCTAGC	1 cut(s)	1192
NlaIV	GGNNCC	2 cut(s)	1060, 1976
NmuCI	GTSAC	3 cut(s)	103, 1158, 1989
NspI	RCATGY	3 cut(s)	289, 998, 1782
PaeI	GCATGC	2 cut(s)	289, 1782
PagI	TCATGA	1 cut(s)	1185
PcsI	WCGNNNNNNNCGW	2 cut(s)	856, 1779
PfeI	GAWTC	6 cut(s)	113, 185, 386, 416, 559, 764
PflMI	CCANNNNNTGG	1 cut(s)	602
PinAI	ACCGGT	1 cut(s)	1506
PleI	GAGTC	3 cut(s)	444, 689, 1993
PpsI	GAGTC	3 cut(s)	444, 689, 1993
PpuMI	RGGWCCY	1 cut(s)	475
Psp5II	RGGWCCY	1 cut(s)	475
Psp6I	CCWGG	5 cut(s)	267, 546, 1122, 1333, 1872
PspFI	CCCAGC	1 cut(s)	1847
PspGI	CCWGG	5 cut(s)	267, 546, 1122, 1333, 1872
PspN4I	GGNNCC	2 cut(s)	1060, 1976
PspPI	GGNCC	4 cut(s)	475, 1254, 1292, 1870
PspPPI	RGGWCCY	1 cut(s)	475
PstI	CTGCAG	2 cut(s)	294, 1959
PstNI	CAGNNNCTG	2 cut(s)	188, 1103
PsuI	RGATCY	4 cut(s)	836, 1459, 1585, 1974
RsaI	GTAC	5 cut(s)	239, 518, 772, 1418, 1625
RsaNI	GTAC	5 cut(s)	238, 517, 771, 1417, 1624
RseI	CAYNNNNRTG	3 cut(s)	993, 1521, 1674
SaqAI	TTAA	3 cut(s)	342, 1464, 1511
Sau3AI	GATC	8 cut(s)	352, 836, 1420, 1459, 1572, 1585, 1830, 1974
Sau96I	GGNCC	4 cut(s)	475, 1254, 1292, 1870
SchI	GAGTC	3 cut(s)	445, 689, 1993
ScrFI	CCNGG	7 cut(s)	269, 548, 1124, 1335, 1369, 1874, 1982
SduI	GDGCHC	3 cut(s)	182, 916, 1987
SexAI	ACCWGGT	3 cut(s)	546, 1122, 1333
SfaNI	GCATC	3 cut(s)	388, 575, 754
SfcI	CTRYAG	3 cut(s)	290, 531, 1955
SinI	GGWCC	3 cut(s)	475, 1292, 1870
SmiMI	CAYNNNNRTG	3 cut(s)	993, 1521, 1674
SmlI	CTYRAG	2 cut(s)	705, 959
SmoI	CTYRAG	2 cut(s)	705, 959
SphI	GCATGC	2 cut(s)	289, 1782
Sse9I	AATT	8 cut(s)	445, 491, 521, 1163, 1317, 1467, 1495, 1567
SsiI	CCGC	4 cut(s)	1042, 1101, 1328, 1726
SspMI	CTAG	6 cut(s)	1034, 1115, 1193, 1347, 1379, 2008
StyD4I	CCNGG	7 cut(s)	267, 546, 1122, 1333, 1367, 1872, 1980
StyI	CCWWGG	1 cut(s)	988
TaaI	ACNGT	4 cut(s)	202, 1534, 1561, 1650
TaiI	ACGT	2 cut(s)	541, 1625
TaqI	TCGA	3 cut(s)	495, 1342, 1737
TaqII	GACCGA	1 cut(s)	1488
TasI	AATT	8 cut(s)	445, 491, 521, 1163, 1317, 1467, 1495, 1567
TatI	WGTACW	1 cut(s)	237
TauI	GCSGC	2 cut(s)	1045, 1103
TfiI	GAWTC	6 cut(s)	113, 185, 386, 416, 559, 764
Tru1I	TTAA	3 cut(s)	342, 1464, 1511
Tru9I	TTAA	3 cut(s)	342, 1464, 1511
TscAI	CASTG	1 cut(s)	1952
TseFI	GTSAC	3 cut(s)	103, 1158, 1989
TseI	GCWGC	8 cut(s)	282, 289, 314, 666, 814, 826, 973, 1858
Tsp45I	GTSAC	3 cut(s)	103, 1158, 1989
TspRI	CASTG	1 cut(s)	1952
Van91I	CCANNNNNTGG	1 cut(s)	602
VneI	GTGCAC	1 cut(s)	912
VpaK11BI	GGWCC	3 cut(s)	475, 1292, 1870
XapI	RAATTY	3 cut(s)	445, 491, 1567
XceI	RCATGY	3 cut(s)	289, 998, 1782
XspI	CTAG	6 cut(s)	1034, 1115, 1193, 1347, 1379, 2008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.