Rh5BG447900

Reverse transcriptase (RNA-dependent DNA polymerase)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000175
Physical Location & Seq
Forward (+)
71805489 .. 71818631
13143 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG447900.1

Sequence Viewer

Length: 1542 bp
ATGGATACCCTTCTTAAAAGATTTTATGGCTCAGCTTCAGTCTCTTCTAATCAAAATCTTGCAAATAGATTCCAAGTAAACCATGAATCCACAAATCCACTTTTTCCAACCAACATTAACCATCCTTATCGTCCATGTACATCTTCGGAGGAAGATACTTGTGACAATAATGACTGCAATAACCCTATGCTCAAGTACATAAGTGATACTCTTCTTGAAGAAGACCTAGAGGGTAAACCTTGCATGTTGCAAAACTGTTTGGCACTCCAAGCTGCTGAAAAATCTTTCTATGATCTCCTCAATCCAAAGTATCGCCCTTCATTTGACCAACCTCCCCATTCTGTGTACCAAAGCTTTGAGAACTCAGATGATGATTCCACACAGAGTTGTCATAGTAGTATTGGCTCTATTACTCCTGTTACTCCTAAGACAAATCCATTTCATGTCGAATCTTCCTTTACCGAGACTATATCAGATACCATTTTGGTTTCACATTCACTTTCTCAGATGGAAAGACTTGGGTTTCTAGGAGTAAGGGAAGCAATCAAAAATGTGGTTTATGAGCCAGAGAATGACAGCTACAGCTCAACAAATGGACCAAAGGGAAAGAAACATCAGCAAAGGGAGGATGGTAATAATCCATACAATGGGAGAAGCAACAAGCAGTCAGCAGCTTCTGCTCAGGACTTTGAGCCGCAAGAAATGTTTGAAAAGGTGTTTCTCTGTCAGGGAGAAAATCATGAGTCCGAGTGTCGTTCTCCTCGTGAATTTATTAAATCTGAGGAAAGTGGGAAGTTGCGGCTTAAGAGACAACCAAGAGGATCAAAGAAACACAACAACAAAATAGTGGATGTATGCGCATTGCTAAATCAGTGTGCACAAGCCATGGCAAGCTATGATCAGCGCGCTGTGAATGAACTACTCAAGCAGATAAGACAACATTCTTCCCCCCATGGTGATGCAACCCAAAGGTTATCTCATTACTTTGCCGATGGGTTAGAGGCACGGTTGGCTGGCACCATGACCCCATCATATTCACCTGTTGCAAGTATGCAGACATCAGCTGCAGATATCTTAAGAGCTCACCGGTTATATGTCACTGCATCCCCTTTAAAGAAAATGTCAAACTTTGTTGCCAATACAACCATCATGGAATTGGCAAAAGACGCTACAAGGCTTCACATTATTGATTTCGGCATTTCTTACGGTTTCCAATGGCCCTGTCTTATCCAACATATCTCAGAGAGACCCGGTGGACCTCCTCAGATACAAATCACAGCAATTGAGCTTCCCCAACCAGGTTTTCGACCTACAGAAAGGGTTGAAGAGACCGGGCGTCGTCTAGCAAGGTATTGTGCAAAGTTCAATGTCCCGTTTGAGTACAATGTCATTGCACAGAAATGGGAATCTATCAGAGTTGAGGATCTTAATATTGACAGAAATGAGCTCATCGTGGTGAATTGTATGCACCGGTTAAGGCACATACCTGATGAGACAGTGATGCTTCGATCTTGGATGATTAAGAATGAAGAATCTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS RVT_2

Protein Analysis

513

Amino Acids

58.22

Weight (kDa)

6.12

Isoelectric Point (pI)

54.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 287 - 504 1.1e-69 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000175)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 859
AccB1I GGYRCC 1 cut(s) 1016
AccB7I CCANNNNNTGG 1 cut(s) 647
AccII CGCG 1 cut(s) 906
AciI CCGC 2 cut(s) 695, 799
AclWI GGATC 2 cut(s) 829, 1431
AcsI RAATTY 1 cut(s) 767
AcuI CTGAAG 1 cut(s) 21
AcyI GRCGYC 1 cut(s) 1336
AfaI GTAC 4 cut(s) 139, 197, 347, 1382
AfiI CCNNNNNNNGG 2 cut(s) 647, 1298
AflII CTTAAG 2 cut(s) 803, 1075
AgeI ACCGGT 2 cut(s) 1086, 1470
AgsI TTSAA 4 cut(s) 218, 710, 1325, 1366
AhdI GACNNNNNGTC 1 cut(s) 1335
AjnI CCWGG 1 cut(s) 1297
AjuI GAANNNNNNNTTGG 2 cut(s) 1287, 1319
Alw21I GWGCWC 3 cut(s) 880, 1084, 1449
Alw26I GTCTC 6 cut(s) 46, 458, 802, 1240, 1322, 1487
Alw44I GTGCAC 1 cut(s) 876
AlwI GGATC 2 cut(s) 829, 1431
AlwNI CAGNNNCTG 1 cut(s) 677
AoxI GGCC 1 cut(s) 1217
ApaLI GTGCAC 1 cut(s) 876
ApeKI GCWGC 3 cut(s) 272, 671, 1064
ApoI RAATTY 1 cut(s) 767
AsiGI ACCGGT 2 cut(s) 1086, 1470
AspLEI GCGC 3 cut(s) 860, 906, 908
AspS9I GGNCC 3 cut(s) 596, 1218, 1256
AsuC2I CCSGG 2 cut(s) 1251, 1333
AsuHPI GGTGA 4 cut(s) 968, 1029, 1076, 1468
AvaII GGWCC 2 cut(s) 596, 1256
BaeGI GKGCMC 1 cut(s) 880
BanI GGYRCC 1 cut(s) 1016
BanII GRGCYC 2 cut(s) 1084, 1449
BauI CACGAG 1 cut(s) 762
BbsI GAAGAC 1 cut(s) 228
Bbv12I GWGCWC 3 cut(s) 880, 1084, 1449
BbvI GCAGC 3 cut(s) 259, 683, 1051
BccI CCATC 6 cut(s) 129, 502, 623, 986, 1036, 1154
BciT130I CCWGG 1 cut(s) 1299
BclI TGATCA 1 cut(s) 898
BcnI CCSGG 2 cut(s) 1251, 1333
BcoDI GTCTC 6 cut(s) 46, 458, 802, 1240, 1322, 1487
BfaI CTAG 3 cut(s) 227, 527, 1343
BfmI CTRYAG 3 cut(s) 580, 1065, 1311
BfrI CTTAAG 2 cut(s) 803, 1075
BisI GCNGC 5 cut(s) 273, 672, 695, 800, 1065
BlpI GCTNAGC 1 cut(s) 31
BlsI GCNGC 5 cut(s) 274, 673, 696, 801, 1066
Bme1390I CCNGG 3 cut(s) 1251, 1299, 1333
Bme18I GGWCC 2 cut(s) 596, 1256
BmeRI GACNNNNNGTC 1 cut(s) 1335
BmgT120I GGNCC 3 cut(s) 596, 1218, 1256
BmiI GGNNCC 1 cut(s) 1018
BmrFI CCNGG 3 cut(s) 1251, 1299, 1333
BmsI GCATC 3 cut(s) 949, 1112, 1491
BpiI GAAGAC 1 cut(s) 228
Bpu10I CCTNAGC 1 cut(s) 681
Bpu1102I GCTNAGC 1 cut(s) 31
BpuEI CTTGAG 2 cut(s) 176, 908
BpuMI CCSGG 2 cut(s) 1251, 1333
BsaBI GATNNNNATC 1 cut(s) 1271
BsaHI GRCGYC 1 cut(s) 1336
BsaI GGTCTC 2 cut(s) 1240, 1322
BsaJI CCNNGG 2 cut(s) 885, 952
BsaWI WCCGGW 2 cut(s) 1086, 1470
Bsc4I CCNNNNNNNGG 2 cut(s) 647, 1298
Bse118I RCCGGY 2 cut(s) 1086, 1470
Bse3DI GCAATG 2 cut(s) 860, 1389
Bse8I GATNNNNATC 1 cut(s) 1271
BseBI CCWGG 1 cut(s) 1299
BseDI CCNNGG 2 cut(s) 885, 952
BseGI GGATG 5 cut(s) 121, 634, 856, 1103, 1521
BseJI GATNNNNATC 1 cut(s) 1271
BseLI CCNNNNNNNGG 2 cut(s) 647, 1298
BseMI GCAATG 2 cut(s) 860, 1389
BseMII CTCAG 7 cut(s) 45, 378, 518, 695, 771, 1254, 1277
BsePI GCGCGC 1 cut(s) 904
BseRI GAGGAG 3 cut(s) 287, 750, 1251
BseSI GKGCMC 1 cut(s) 880
BseXI GCAGC 3 cut(s) 259, 683, 1051
Bsh1236I CGCG 1 cut(s) 906
BshFI GGCC 1 cut(s) 1219
BshNI GGYRCC 1 cut(s) 1016
BshTI ACCGGT 2 cut(s) 1086, 1470
BsiHKAI GWGCWC 3 cut(s) 880, 1084, 1449
BsiSI CCGG 4 cut(s) 1087, 1251, 1332, 1471
BslFI GGGAC 1 cut(s) 1355
BslI CCNNNNNNNGG 2 cut(s) 647, 1298
BsmAI GTCTC 6 cut(s) 46, 458, 802, 1240, 1322, 1487
BsmFI GGGAC 1 cut(s) 1355
BsnI GGCC 1 cut(s) 1219
Bso31I GGTCTC 2 cut(s) 1240, 1322
Bsp1286I GDGCHC 3 cut(s) 880, 1084, 1449
Bsp1407I TGTACA 1 cut(s) 137
Bsp143I GATC 5 cut(s) 292, 821, 898, 1423, 1508
Bsp1720I GCTNAGC 1 cut(s) 31
Bsp19I CCATGG 2 cut(s) 885, 952
BspACI CCGC 2 cut(s) 695, 799
BspANI GGCC 1 cut(s) 1219
BspCNI CTCAG 7 cut(s) 44, 377, 517, 694, 772, 1253, 1276
BspFNI CGCG 1 cut(s) 906
BspHI TCATGA 1 cut(s) 739
BspLI GGNNCC 1 cut(s) 1018
BspMAI CTGCAG 1 cut(s) 1069
BspPI GGATC 2 cut(s) 829, 1431
BspT107I GGYRCC 1 cut(s) 1016
BspTI CTTAAG 2 cut(s) 803, 1075
BspTNI GGTCTC 2 cut(s) 1240, 1322
BsrDI GCAATG 2 cut(s) 860, 1389
BsrFI RCCGGY 2 cut(s) 1086, 1470
BsrGI TGTACA 1 cut(s) 137
BssAI RCCGGY 2 cut(s) 1086, 1470
BssECI CCNNGG 2 cut(s) 885, 952
BssHII GCGCGC 1 cut(s) 904
BssMI GATC 5 cut(s) 292, 821, 898, 1423, 1508
BssNI GRCGYC 1 cut(s) 1336
BssSI CACGAG 1 cut(s) 762
BssT1I CCWWGG 2 cut(s) 885, 952
Bst2BI CACGAG 1 cut(s) 762
Bst2UI CCWGG 1 cut(s) 1299
Bst4CI ACNGT 4 cut(s) 257, 1008, 1208, 1498
Bst6I CTCTTC 3 cut(s) 49, 216, 1320
BstACI GRCGYC 1 cut(s) 1336
BstAFI CTTAAG 2 cut(s) 803, 1075
BstAPI GCANNNNNTGC 1 cut(s) 677
BstAUI TGTACA 1 cut(s) 137
BstC8I GCNNGC 3 cut(s) 892, 906, 1015
BstDEI CTNAG 8 cut(s) 31, 364, 426, 504, 681, 780, 1240, 1263
BstDSI CCRYGG 2 cut(s) 885, 952
BstF5I GGATG 5 cut(s) 121, 634, 856, 1103, 1521
BstFNI CGCG 1 cut(s) 906
BstHHI GCGC 3 cut(s) 860, 906, 908
BstKTI GATC 5 cut(s) 295, 824, 901, 1426, 1511
BstMAI GTCTC 6 cut(s) 46, 458, 802, 1240, 1322, 1487
BstMBI GATC 5 cut(s) 292, 821, 898, 1423, 1508
BstMWI GCNNNNNNNGC 4 cut(s) 269, 677, 1010, 1166
BstNI CCWGG 1 cut(s) 1299
BstNSI RCATGY 1 cut(s) 247
BstSCI CCNGG 3 cut(s) 1249, 1297, 1331
BstSFI CTRYAG 3 cut(s) 580, 1065, 1311
BstSLI GKGCMC 1 cut(s) 880
BstUI CGCG 1 cut(s) 906
BstV1I GCAGC 3 cut(s) 259, 683, 1051
BstV2I GAAGAC 1 cut(s) 228
BstX2I RGATCY 1 cut(s) 1423
BstYI RGATCY 1 cut(s) 1423
BsuRI GGCC 1 cut(s) 1219
BtgI CCRYGG 2 cut(s) 885, 952
BtsCI GGATG 5 cut(s) 121, 634, 856, 1103, 1521
BtsI GCAGTG 1 cut(s) 1098
BtsIMutI CAGTG 3 cut(s) 878, 1098, 1503
Cac8I GCNNGC 3 cut(s) 892, 906, 1015
CaiI CAGNNNCTG 1 cut(s) 677
CciI TCATGA 1 cut(s) 739
CfoI GCGC 3 cut(s) 860, 906, 908
Cfr10I RCCGGY 2 cut(s) 1086, 1470
Cfr13I GGNCC 3 cut(s) 596, 1218, 1256
CseI GACGC 2 cut(s) 1175, 1325
CsiI ACCWGGT 1 cut(s) 1297
Csp6I GTAC 4 cut(s) 138, 196, 346, 1381
CspAI ACCGGT 2 cut(s) 1086, 1470
CviAII CATG 9 cut(s) 83, 135, 244, 443, 740, 886, 953, 1021, 1150
CviQI GTAC 4 cut(s) 138, 196, 346, 1381
DdeI CTNAG 8 cut(s) 31, 364, 426, 504, 681, 780, 1240, 1263
DpnI GATC 5 cut(s) 294, 823, 900, 1425, 1510
DpnII GATC 5 cut(s) 292, 821, 898, 1423, 1508
DraI TTTAAA 1 cut(s) 1113
DriI GACNNNNNGTC 1 cut(s) 1335
Eam1104I CTCTTC 3 cut(s) 49, 216, 1320
Eam1105I GACNNNNNGTC 1 cut(s) 1335
EarI CTCTTC 3 cut(s) 49, 216, 1320
Ecl136II GAGCTC 2 cut(s) 1082, 1447
Eco130I CCWWGG 2 cut(s) 885, 952
Eco24I GRGCYC 2 cut(s) 1084, 1449
Eco31I GGTCTC 2 cut(s) 1240, 1322
Eco32I GATATC 1 cut(s) 1072
Eco47I GGWCC 2 cut(s) 596, 1256
Eco53kI GAGCTC 2 cut(s) 1082, 1447
Eco57I CTGAAG 1 cut(s) 21
EcoICRI GAGCTC 2 cut(s) 1082, 1447
EcoRII CCWGG 1 cut(s) 1297
EcoRV GATATC 1 cut(s) 1072
EcoT14I CCWWGG 2 cut(s) 885, 952
EcoT38I GRGCYC 2 cut(s) 1084, 1449
ErhI CCWWGG 2 cut(s) 885, 952
FaeI CATG 9 cut(s) 86, 138, 247, 446, 743, 889, 956, 1024, 1153
FaqI GGGAC 1 cut(s) 1355
FatI CATG 9 cut(s) 82, 134, 243, 442, 739, 885, 952, 1020, 1149
FbaI TGATCA 1 cut(s) 898
Fnu4HI GCNGC 5 cut(s) 273, 672, 695, 800, 1065
FokI GGATG 5 cut(s) 108, 641, 863, 1090, 1528
FriOI GRGCYC 2 cut(s) 1084, 1449
Fsp4HI GCNGC 5 cut(s) 273, 672, 695, 800, 1065
FspAI RTGCGCAY 1 cut(s) 859
FspBI CTAG 3 cut(s) 227, 527, 1343
FspI TGCGCA 1 cut(s) 859
GlaI GCGC 3 cut(s) 859, 905, 907
GluI GCNGC 5 cut(s) 273, 672, 695, 800, 1065
HaeIII GGCC 1 cut(s) 1219
HapII CCGG 4 cut(s) 1087, 1251, 1332, 1471
HgaI GACGC 2 cut(s) 1175, 1325
HhaI GCGC 3 cut(s) 860, 906, 908
Hin1I GRCGYC 1 cut(s) 1336
Hin1II CATG 9 cut(s) 86, 138, 247, 446, 743, 889, 956, 1024, 1153
Hin6I GCGC 3 cut(s) 858, 904, 906
HinP1I GCGC 3 cut(s) 858, 904, 906
HindIII AAGCTT 1 cut(s) 352
HinfI GANTC 7 cut(s) 69, 86, 374, 449, 743, 1406, 1532
HpaII CCGG 4 cut(s) 1087, 1251, 1332, 1471
HphI GGTGA 4 cut(s) 968, 1029, 1076, 1468
Hpy166II GTNNAC 5 cut(s) 79, 236, 346, 878, 1256
Hpy188I TCNGA 9 cut(s) 148, 367, 475, 507, 748, 781, 1243, 1266, 1415
Hpy188III TCNNGA 4 cut(s) 215, 683, 740, 764
Hpy8I GTNNAC 5 cut(s) 79, 236, 346, 878, 1256
Hpy99I CGWCG 1 cut(s) 1341
HpyAV CCTTC 2 cut(s) 20, 327
HpyCH4III ACNGT 4 cut(s) 257, 1008, 1208, 1498
HpyF10VI GCNNNNNNNGC 4 cut(s) 269, 677, 1010, 1166
HpyF3I CTNAG 8 cut(s) 31, 364, 426, 504, 681, 780, 1240, 1263
Hsp92I GRCGYC 1 cut(s) 1336
Hsp92II CATG 9 cut(s) 86, 138, 247, 446, 743, 889, 956, 1024, 1153
HspAI GCGC 3 cut(s) 858, 904, 906
Ksp22I TGATCA 1 cut(s) 898
Kzo9I GATC 5 cut(s) 292, 821, 898, 1423, 1508
Lsp1109I GCAGC 3 cut(s) 259, 683, 1051
LweI GCATC 3 cut(s) 949, 1112, 1491
MabI ACCWGGT 1 cut(s) 1297
MaeI CTAG 3 cut(s) 227, 527, 1343
MaeIII GTNAC 3 cut(s) 161, 418, 1096
MalI GATC 5 cut(s) 294, 823, 900, 1425, 1510
MboI GATC 5 cut(s) 292, 821, 898, 1423, 1508
MfeI CAATTG 1 cut(s) 1281
MflI RGATCY 1 cut(s) 1423
MhlI GDGCHC 3 cut(s) 880, 1084, 1449
MluCI AATT 4 cut(s) 767, 1154, 1281, 1459
MlyI GAGTC 1 cut(s) 752
MmeI TCCRAC 2 cut(s) 131, 1255
MseI TTAA 9 cut(s) 15, 117, 774, 804, 1076, 1112, 1428, 1475, 1521
MslI CAYNNNNRTG 3 cut(s) 957, 1399, 1454
MspA1I CMGCKG 1 cut(s) 1064
MspCI CTTAAG 2 cut(s) 803, 1075
MspI CCGG 4 cut(s) 1087, 1251, 1332, 1471
MspR9I CCNGG 3 cut(s) 1251, 1299, 1333
MunI CAATTG 1 cut(s) 1281
MvaI CCWGG 1 cut(s) 1299
MvnI CGCG 1 cut(s) 906
MwoI GCNNNNNNNGC 4 cut(s) 269, 677, 1010, 1166
NciI CCSGG 2 cut(s) 1251, 1333
NcoI CCATGG 2 cut(s) 885, 952
NdeII GATC 5 cut(s) 292, 821, 898, 1423, 1508
NlaIII CATG 9 cut(s) 86, 138, 247, 446, 743, 889, 956, 1024, 1153
NlaIV GGNNCC 1 cut(s) 1018
NmuCI GTSAC 2 cut(s) 161, 1096
NsbI TGCGCA 1 cut(s) 859
NspI RCATGY 1 cut(s) 247
PagI TCATGA 1 cut(s) 739
PauI GCGCGC 1 cut(s) 904
PcsI WCGNNNNNNNCGW 1 cut(s) 760
PfeI GAWTC 6 cut(s) 69, 86, 374, 449, 1406, 1532
PflMI CCANNNNNTGG 1 cut(s) 647
PinAI ACCGGT 2 cut(s) 1086, 1470
PkrI GCNGC 5 cut(s) 274, 673, 696, 801, 1066
PleI GAGTC 1 cut(s) 751
PpsI GAGTC 1 cut(s) 751
Psp124BI GAGCTC 2 cut(s) 1084, 1449
Psp6I CCWGG 1 cut(s) 1297
PspGI CCWGG 1 cut(s) 1297
PspN4I GGNNCC 1 cut(s) 1018
PspPI GGNCC 3 cut(s) 596, 1218, 1256
PstI CTGCAG 1 cut(s) 1069
PstNI CAGNNNCTG 1 cut(s) 677
PsuI RGATCY 1 cut(s) 1423
PteI GCGCGC 1 cut(s) 904
PvuII CAGCTG 1 cut(s) 1064
RsaI GTAC 4 cut(s) 139, 197, 347, 1382
RsaNI GTAC 4 cut(s) 138, 196, 346, 1381
RseI CAYNNNNRTG 3 cut(s) 957, 1399, 1454
SacI GAGCTC 2 cut(s) 1084, 1449
SaqAI TTAA 9 cut(s) 15, 117, 774, 804, 1076, 1112, 1428, 1475, 1521
SatI GCNGC 5 cut(s) 273, 672, 695, 800, 1065
Sau3AI GATC 5 cut(s) 292, 821, 898, 1423, 1508
Sau96I GGNCC 3 cut(s) 596, 1218, 1256
SchI GAGTC 1 cut(s) 752
ScrFI CCNGG 3 cut(s) 1251, 1299, 1333
SduI GDGCHC 3 cut(s) 880, 1084, 1449
SexAI ACCWGGT 1 cut(s) 1297
SfaNI GCATC 3 cut(s) 949, 1112, 1491
SfcI CTRYAG 3 cut(s) 580, 1065, 1311
SinI GGWCC 2 cut(s) 596, 1256
SmiMI CAYNNNNRTG 3 cut(s) 957, 1399, 1454
SmlI CTYRAG 4 cut(s) 191, 803, 923, 1075
SmoI CTYRAG 4 cut(s) 191, 803, 923, 1075
Sse9I AATT 4 cut(s) 767, 1154, 1281, 1459
SsiI CCGC 2 cut(s) 695, 799
SspI AATATT 1 cut(s) 1432
SspMI CTAG 3 cut(s) 227, 527, 1343
SstI GAGCTC 2 cut(s) 1084, 1449
StyD4I CCNGG 3 cut(s) 1249, 1297, 1331
StyI CCWWGG 2 cut(s) 885, 952
TaaI ACNGT 4 cut(s) 257, 1008, 1208, 1498
TaqI TCGA 3 cut(s) 447, 1306, 1507
TasI AATT 4 cut(s) 767, 1154, 1281, 1459
TatI WGTACW 3 cut(s) 137, 195, 1380
TauI GCSGC 2 cut(s) 697, 802
TfiI GAWTC 6 cut(s) 69, 86, 374, 449, 1406, 1532
Tru1I TTAA 9 cut(s) 15, 117, 774, 804, 1076, 1112, 1428, 1475, 1521
Tru9I TTAA 9 cut(s) 15, 117, 774, 804, 1076, 1112, 1428, 1475, 1521
TscAI CASTG 3 cut(s) 878, 1105, 1503
TseFI GTSAC 2 cut(s) 161, 1096
TseI GCWGC 3 cut(s) 272, 671, 1064
Tsp45I GTSAC 2 cut(s) 161, 1096
TspDTI ATGAA 5 cut(s) 99, 309, 431, 930, 1542
TspRI CASTG 3 cut(s) 878, 1105, 1503
Van91I CCANNNNNTGG 1 cut(s) 647
Vha464I CTTAAG 2 cut(s) 803, 1075
VneI GTGCAC 1 cut(s) 876
VpaK11BI GGWCC 2 cut(s) 596, 1256
XapI RAATTY 1 cut(s) 767
XceI RCATGY 1 cut(s) 247
XcmI CCANNNNNNNNNTGG 1 cut(s) 1153
XspI CTAG 3 cut(s) 227, 527, 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.