RchiOBHm_Chr5g0065651

Reverse transcriptase (RNA-dependent DNA polymerase)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000175
Physical Location & Seq
Forward (+)
71633128 .. 71634221
1094 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34151

Sequence Viewer

Length: 1035 bp
ATGGCAAGCTATGATCAGCGCGCTGTGAATGAACTACTCAAGCAGATAAGACAACATTCTTCCCCCCATGGTGATGCAACCCAAAGGTTATCTCATTACTTTGCCGATGGGTTAGAGGCACGGTTGGCTGGCACCATGACCCCATCATATTCGCCTGTTGCAAGTATGCAGACATCAGCTGCAGATATCTTAAGAGCTCACCGGTTATATGTCACTGCATCCCCTTTAAAGAAAATGTCAAACTTTGTTGCCAATACAACCATCATGGAATTGGCAAAAGACGCTACAAGGCTTCACATTATTGATTTCGGAATTTCTTACGGTTTCCAATGGCCCTGTCTTATCCAACATATCTCAGAGAGACCCGGTGGACCTCCTCGATACAAATCACAGCAATTGAGCTTCCCCAACGAGGTTTTCGACCTACAGAAAGGGTTGAAGAGACCGGGCGTCAAATGGGAATCTATCAGAGTTGAGGATCTTAATATTGACAGAAATGAGCTCATCGTGGTGAATTGTATGCACCGGTTAAGGCACATACTTGATGAGACAGTGATGGTGGGCAGTCCAAGAGACAGAGTACTAAAGTTGATTAAGAAAATTAATCCAGACCTTTTCGTTCATGGGATTATCAATGGGACATACAGTCCACCCTTTTTTGTCACGCGGTTCAAAGAGGCACTCTTCCATTTCGGTGCACTATTTGATATGTTTGAGGCCATTGTTCCTCGTGAAGATCAATGGAGGCAGATATTTGAGAGAGAAATATATGGGAGGGACATAATAAATGTTGTAGCATGCGAGGGACTGGAAAGAGTTGAAAGGCCCGAGACATACAAGCAATGGAATCTCAGGACTCTCAGGACTGGGTTCAAGCAGGTGCCATTAGAGCAGGATTGCTTGATGAAAGTGAAGAGTATGTTAAAGTTGACGGGTTATCATAAGGACTTTAAAATTGATGAGGATGGGGAGTGGATGCTGCAGGGATGGAAAGGAAGAACCGTTATGGCTCTCTCTTTTTGGAAACCTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS RVT_2

Protein Analysis

344

Amino Acids

39.83

Weight (kDa)

9.13

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 2 - 129 2.1e-38 GRAS domain family
GRAS PF03514 152 - 342 1.3e-55 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000175)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 868
Acc36I ACCTGC 1 cut(s) 868
AccB1I GGYRCC 2 cut(s) 131, 880
AccII CGCG 2 cut(s) 21, 667
AciI CCGC 1 cut(s) 667
AclWI GGATC 1 cut(s) 486
AcsI RAATTY 1 cut(s) 312
AcyI GRCGYC 1 cut(s) 450
AfaI GTAC 1 cut(s) 582
AfiI CCNNNNNNNGG 1 cut(s) 412
AflII CTTAAG 1 cut(s) 190
AgeI ACCGGT 2 cut(s) 201, 525
AgsI TTSAA 4 cut(s) 439, 673, 821, 874
AhdI GACNNNNNGTC 2 cut(s) 449, 645
AjuI GAANNNNNNNTTGG 2 cut(s) 401, 433
AluBI AGCT 5 cut(s) 9, 179, 197, 402, 502
AluI AGCT 5 cut(s) 9, 179, 197, 402, 502
Alw21I GWGCWC 3 cut(s) 199, 504, 700
Alw26I GTCTC 5 cut(s) 355, 436, 542, 567, 824
Alw44I GTGCAC 1 cut(s) 696
AlwI GGATC 1 cut(s) 486
Ama87I CYCGRG 1 cut(s) 827
AoxI GGCC 3 cut(s) 332, 717, 824
ApaLI GTGCAC 1 cut(s) 696
ApeKI GCWGC 2 cut(s) 179, 979
ApoI RAATTY 1 cut(s) 312
AseI ATTAAT 1 cut(s) 603
AsiGI ACCGGT 2 cut(s) 201, 525
AspLEI GCGC 2 cut(s) 21, 23
AspS9I GGNCC 3 cut(s) 333, 371, 825
AsuC2I CCSGG 2 cut(s) 366, 447
AsuHPI GGTGA 3 cut(s) 83, 191, 523
AvaI CYCGRG 1 cut(s) 827
AvaII GGWCC 1 cut(s) 371
BaeGI GKGCMC 1 cut(s) 700
BanI GGYRCC 2 cut(s) 131, 880
BanII GRGCYC 2 cut(s) 199, 504
BauI CACGAG 1 cut(s) 729
Bbv12I GWGCWC 3 cut(s) 199, 504, 700
BbvI GCAGC 2 cut(s) 166, 966
BccI CCATC 6 cut(s) 101, 151, 269, 550, 959, 981
BclI TGATCA 1 cut(s) 13
BcnI CCSGG 2 cut(s) 366, 447
BcoDI GTCTC 5 cut(s) 355, 436, 542, 567, 824
BfmI CTRYAG 3 cut(s) 180, 425, 980
BfrI CTTAAG 1 cut(s) 190
BfuAI ACCTGC 1 cut(s) 868
BisI GCNGC 2 cut(s) 180, 980
BlsI GCNGC 2 cut(s) 181, 981
BmcAI AGTACT 1 cut(s) 582
Bme1390I CCNGG 2 cut(s) 366, 447
Bme18I GGWCC 1 cut(s) 371
BmeRI GACNNNNNGTC 2 cut(s) 449, 645
BmeT110I CYCGRG 1 cut(s) 827
BmgT120I GGNCC 3 cut(s) 333, 371, 825
BmiI GGNNCC 2 cut(s) 133, 882
BmrFI CCNGG 2 cut(s) 366, 447
BmrI ACTGGG 1 cut(s) 876
BmsI GCATC 3 cut(s) 64, 227, 966
BmuI ACTGGG 1 cut(s) 876
BpuEI CTTGAG 1 cut(s) 23
BpuMI CCSGG 2 cut(s) 366, 447
BsaBI GATNNNNATC 1 cut(s) 385
BsaHI GRCGYC 1 cut(s) 450
BsaI GGTCTC 2 cut(s) 355, 436
BsaJI CCNNGG 1 cut(s) 67
BsaWI WCCGGW 2 cut(s) 201, 525
Bsc4I CCNNNNNNNGG 1 cut(s) 412
Bse118I RCCGGY 2 cut(s) 201, 525
Bse1I ACTGG 2 cut(s) 813, 871
Bse3DI GCAATG 1 cut(s) 848
Bse8I GATNNNNATC 1 cut(s) 385
BseDI CCNNGG 1 cut(s) 67
BseGI GGATG 4 cut(s) 218, 970, 981, 992
BseJI GATNNNNATC 1 cut(s) 385
BseLI CCNNNNNNNGG 1 cut(s) 412
BseMI GCAATG 1 cut(s) 848
BseMII CTCAG 3 cut(s) 369, 865, 874
BseNI ACTGG 2 cut(s) 813, 871
BsePI GCGCGC 1 cut(s) 19
BseRI GAGGAG 1 cut(s) 366
BseSI GKGCMC 1 cut(s) 700
BseXI GCAGC 2 cut(s) 166, 966
Bsh1236I CGCG 2 cut(s) 21, 667
BshFI GGCC 3 cut(s) 334, 719, 826
BshNI GGYRCC 2 cut(s) 131, 880
BshTI ACCGGT 2 cut(s) 201, 525
BsiHKAI GWGCWC 3 cut(s) 199, 504, 700
BsiHKCI CYCGRG 1 cut(s) 827
BsiSI CCGG 4 cut(s) 202, 366, 446, 526
BslFI GGGAC 3 cut(s) 652, 791, 819
BslI CCNNNNNNNGG 1 cut(s) 412
BsmAI GTCTC 5 cut(s) 355, 436, 542, 567, 824
BsmFI GGGAC 3 cut(s) 652, 791, 819
BsnI GGCC 3 cut(s) 334, 719, 826
Bso31I GGTCTC 2 cut(s) 355, 436
BsoBI CYCGRG 1 cut(s) 827
Bsp1286I GDGCHC 3 cut(s) 199, 504, 700
Bsp143I GATC 3 cut(s) 13, 478, 736
Bsp19I CCATGG 1 cut(s) 67
BspACI CCGC 1 cut(s) 667
BspANI GGCC 3 cut(s) 334, 719, 826
BspCNI CTCAG 3 cut(s) 368, 864, 873
BspFNI CGCG 2 cut(s) 21, 667
BspLI GGNNCC 2 cut(s) 133, 882
BspMAI CTGCAG 2 cut(s) 184, 984
BspMI ACCTGC 1 cut(s) 868
BspPI GGATC 1 cut(s) 486
BspT107I GGYRCC 2 cut(s) 131, 880
BspTI CTTAAG 1 cut(s) 190
BspTNI GGTCTC 2 cut(s) 355, 436
BsrDI GCAATG 1 cut(s) 848
BsrFI RCCGGY 2 cut(s) 201, 525
BsrI ACTGG 2 cut(s) 813, 871
BssAI RCCGGY 2 cut(s) 201, 525
BssECI CCNNGG 1 cut(s) 67
BssHII GCGCGC 1 cut(s) 19
BssMI GATC 3 cut(s) 13, 478, 736
BssNI GRCGYC 1 cut(s) 450
BssSI CACGAG 1 cut(s) 729
BssT1I CCWWGG 1 cut(s) 67
Bst2BI CACGAG 1 cut(s) 729
Bst4CI ACNGT 5 cut(s) 123, 323, 553, 647, 1003
Bst6I CTCTTC 3 cut(s) 434, 689, 908
BstACI GRCGYC 1 cut(s) 450
BstAFI CTTAAG 1 cut(s) 190
BstC8I GCNNGC 4 cut(s) 7, 21, 130, 799
BstDEI CTNAG 3 cut(s) 355, 851, 860
BstDSI CCRYGG 1 cut(s) 67
BstF5I GGATG 4 cut(s) 218, 970, 981, 992
BstFNI CGCG 2 cut(s) 21, 667
BstHHI GCGC 2 cut(s) 21, 23
BstKTI GATC 3 cut(s) 16, 481, 739
BstMAI GTCTC 5 cut(s) 355, 436, 542, 567, 824
BstMBI GATC 3 cut(s) 13, 478, 736
BstMWI GCNNNNNNNGC 3 cut(s) 125, 281, 889
BstNSI RCATGY 1 cut(s) 801
BstSCI CCNGG 2 cut(s) 364, 445
BstSFI CTRYAG 3 cut(s) 180, 425, 980
BstSLI GKGCMC 1 cut(s) 700
BstUI CGCG 2 cut(s) 21, 667
BstV1I GCAGC 2 cut(s) 166, 966
BstX2I RGATCY 1 cut(s) 478
BstYI RGATCY 1 cut(s) 478
BsuRI GGCC 3 cut(s) 334, 719, 826
BtgI CCRYGG 1 cut(s) 67
BtsCI GGATG 4 cut(s) 218, 970, 981, 992
BtsI GCAGTG 1 cut(s) 213
BtsIMutI CAGTG 2 cut(s) 213, 558
BveI ACCTGC 1 cut(s) 868
Cac8I GCNNGC 4 cut(s) 7, 21, 130, 799
CfoI GCGC 2 cut(s) 21, 23
Cfr10I RCCGGY 2 cut(s) 201, 525
Cfr13I GGNCC 3 cut(s) 333, 371, 825
CseI GACGC 2 cut(s) 290, 439
Csp6I GTAC 1 cut(s) 581
CspAI ACCGGT 2 cut(s) 201, 525
CviAII CATG 5 cut(s) 68, 136, 265, 623, 798
CviQI GTAC 1 cut(s) 581
DdeI CTNAG 3 cut(s) 355, 851, 860
DpnI GATC 3 cut(s) 15, 480, 738
DpnII GATC 3 cut(s) 13, 478, 736
DraI TTTAAA 2 cut(s) 228, 952
DriI GACNNNNNGTC 2 cut(s) 449, 645
Eam1104I CTCTTC 3 cut(s) 434, 689, 908
Eam1105I GACNNNNNGTC 2 cut(s) 449, 645
EarI CTCTTC 3 cut(s) 434, 689, 908
Ecl136II GAGCTC 2 cut(s) 197, 502
Eco130I CCWWGG 1 cut(s) 67
Eco24I GRGCYC 2 cut(s) 199, 504
Eco31I GGTCTC 2 cut(s) 355, 436
Eco32I GATATC 1 cut(s) 187
Eco47I GGWCC 1 cut(s) 371
Eco53kI GAGCTC 2 cut(s) 197, 502
Eco88I CYCGRG 1 cut(s) 827
EcoICRI GAGCTC 2 cut(s) 197, 502
EcoRV GATATC 1 cut(s) 187
EcoT14I CCWWGG 1 cut(s) 67
EcoT38I GRGCYC 2 cut(s) 199, 504
ErhI CCWWGG 1 cut(s) 67
FaeI CATG 5 cut(s) 71, 139, 268, 626, 801
FaqI GGGAC 3 cut(s) 652, 791, 819
FatI CATG 5 cut(s) 67, 135, 264, 622, 797
FbaI TGATCA 1 cut(s) 13
Fnu4HI GCNGC 2 cut(s) 180, 980
FokI GGATG 4 cut(s) 205, 977, 988, 999
FriOI GRGCYC 2 cut(s) 199, 504
Fsp4HI GCNGC 2 cut(s) 180, 980
GlaI GCGC 2 cut(s) 20, 22
GluI GCNGC 2 cut(s) 180, 980
HaeIII GGCC 3 cut(s) 334, 719, 826
HapII CCGG 4 cut(s) 202, 366, 446, 526
HgaI GACGC 2 cut(s) 290, 439
HhaI GCGC 2 cut(s) 21, 23
Hin1I GRCGYC 1 cut(s) 450
Hin1II CATG 5 cut(s) 71, 139, 268, 626, 801
Hin6I GCGC 2 cut(s) 19, 21
HinP1I GCGC 2 cut(s) 19, 21
HincII GTYRAC 1 cut(s) 930
HindII GTYRAC 1 cut(s) 930
HinfI GANTC 3 cut(s) 461, 847, 856
HpaII CCGG 4 cut(s) 202, 366, 446, 526
HphI GGTGA 3 cut(s) 83, 191, 523
Hpy166II GTNNAC 4 cut(s) 371, 650, 698, 930
Hpy188I TCNGA 3 cut(s) 311, 358, 470
Hpy188III TCNNGA 4 cut(s) 608, 731, 853, 862
Hpy8I GTNNAC 4 cut(s) 371, 650, 698, 930
HpyCH4III ACNGT 5 cut(s) 123, 323, 553, 647, 1003
HpyCH4V TGCA 8 cut(s) 77, 161, 169, 182, 218, 523, 698, 982
HpyF10VI GCNNNNNNNGC 3 cut(s) 125, 281, 889
HpyF3I CTNAG 3 cut(s) 355, 851, 860
Hsp92I GRCGYC 1 cut(s) 450
Hsp92II CATG 5 cut(s) 71, 139, 268, 626, 801
HspAI GCGC 2 cut(s) 19, 21
Ksp22I TGATCA 1 cut(s) 13
Kzo9I GATC 3 cut(s) 13, 478, 736
Lsp1109I GCAGC 2 cut(s) 166, 966
LweI GCATC 3 cut(s) 64, 227, 966
MaeIII GTNAC 2 cut(s) 211, 661
MalI GATC 3 cut(s) 15, 480, 738
MboI GATC 3 cut(s) 13, 478, 736
MboII GAAGA 6 cut(s) 51, 451, 676, 746, 925, 1008
MfeI CAATTG 1 cut(s) 395
MflI RGATCY 1 cut(s) 478
MhlI GDGCHC 3 cut(s) 199, 504, 700
MluCI AATT 6 cut(s) 269, 312, 395, 514, 600, 954
MlyI GAGTC 1 cut(s) 850
MmeI TCCRAC 1 cut(s) 370
MseI TTAA 8 cut(s) 191, 227, 483, 530, 594, 603, 923, 951
MslI CAYNNNNRTG 3 cut(s) 72, 509, 693
MspA1I CMGCKG 1 cut(s) 179
MspCI CTTAAG 1 cut(s) 190
MspI CCGG 4 cut(s) 202, 366, 446, 526
MspR9I CCNGG 2 cut(s) 366, 447
MunI CAATTG 1 cut(s) 395
MvnI CGCG 2 cut(s) 21, 667
MwoI GCNNNNNNNGC 3 cut(s) 125, 281, 889
NciI CCSGG 2 cut(s) 366, 447
NcoI CCATGG 1 cut(s) 67
NdeII GATC 3 cut(s) 13, 478, 736
NlaIII CATG 5 cut(s) 71, 139, 268, 626, 801
NlaIV GGNNCC 2 cut(s) 133, 882
NmuCI GTSAC 2 cut(s) 211, 661
NspI RCATGY 1 cut(s) 801
PaeI GCATGC 1 cut(s) 801
PaqCI CACCTGC 1 cut(s) 868
PauI GCGCGC 1 cut(s) 19
PcsI WCGNNNNNNNCGW 1 cut(s) 417
PfeI GAWTC 2 cut(s) 461, 847
PinAI ACCGGT 2 cut(s) 201, 525
PkrI GCNGC 2 cut(s) 181, 981
PleI GAGTC 1 cut(s) 850
PpsI GAGTC 1 cut(s) 850
PshBI ATTAAT 1 cut(s) 603
Psp124BI GAGCTC 2 cut(s) 199, 504
PspN4I GGNNCC 2 cut(s) 133, 882
PspPI GGNCC 3 cut(s) 333, 371, 825
PstI CTGCAG 2 cut(s) 184, 984
PsuI RGATCY 1 cut(s) 478
PteI GCGCGC 1 cut(s) 19
PvuII CAGCTG 1 cut(s) 179
RsaI GTAC 1 cut(s) 582
RsaNI GTAC 1 cut(s) 581
RseI CAYNNNNRTG 3 cut(s) 72, 509, 693
SacI GAGCTC 2 cut(s) 199, 504
SaqAI TTAA 8 cut(s) 191, 227, 483, 530, 594, 603, 923, 951
SatI GCNGC 2 cut(s) 180, 980
Sau3AI GATC 3 cut(s) 13, 478, 736
Sau96I GGNCC 3 cut(s) 333, 371, 825
ScaI AGTACT 1 cut(s) 582
SchI GAGTC 1 cut(s) 850
ScrFI CCNGG 2 cut(s) 366, 447
SduI GDGCHC 3 cut(s) 199, 504, 700
SfaNI GCATC 3 cut(s) 64, 227, 966
SfcI CTRYAG 3 cut(s) 180, 425, 980
SinI GGWCC 1 cut(s) 371
SmiMI CAYNNNNRTG 3 cut(s) 72, 509, 693
SmlI CTYRAG 2 cut(s) 38, 190
SmoI CTYRAG 2 cut(s) 38, 190
SphI GCATGC 1 cut(s) 801
Sse9I AATT 6 cut(s) 269, 312, 395, 514, 600, 954
SsiI CCGC 1 cut(s) 667
SspI AATATT 1 cut(s) 487
SstI GAGCTC 2 cut(s) 199, 504
StyD4I CCNGG 2 cut(s) 364, 445
StyI CCWWGG 1 cut(s) 67
TaaI ACNGT 5 cut(s) 123, 323, 553, 647, 1003
TaqI TCGA 2 cut(s) 379, 420
TasI AATT 6 cut(s) 269, 312, 395, 514, 600, 954
TatI WGTACW 1 cut(s) 580
TfiI GAWTC 2 cut(s) 461, 847
Tru1I TTAA 8 cut(s) 191, 227, 483, 530, 594, 603, 923, 951
Tru9I TTAA 8 cut(s) 191, 227, 483, 530, 594, 603, 923, 951
TscAI CASTG 2 cut(s) 220, 558
TseFI GTSAC 2 cut(s) 211, 661
TseI GCWGC 2 cut(s) 179, 979
Tsp45I GTSAC 2 cut(s) 211, 661
TspDTI ATGAA 3 cut(s) 45, 611, 920
TspRI CASTG 2 cut(s) 220, 558
Vha464I CTTAAG 1 cut(s) 190
VneI GTGCAC 1 cut(s) 696
VpaK11BI GGWCC 1 cut(s) 371
VspI ATTAAT 1 cut(s) 603
XapI RAATTY 1 cut(s) 312
XceI RCATGY 1 cut(s) 801
XcmI CCANNNNNNNNNTGG 1 cut(s) 268
ZrmI AGTACT 1 cut(s) 582
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.