RLG00000035801

Reverse transcriptase (RNA-dependent DNA polymerase)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000175
Physical Location & Seq
Forward (+)
71883230 .. 71885479
2250 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035801

Sequence Viewer

Length: 2109 bp
ATGATATTACTCAAGTCTGATTCTTGCTCTCTTTCTGGATATTCTGTCTCCAATCCCATGGAGAGGTTCAAATTTGACCATGGCCCGGTTTCAGTCTGTCCAAATCCCAACCTTGTAAATGGGTTCAAAATAAATCATGAATCCACCAATCCAATAGACCTTTCTAGTGTTTCAAGTAATGAGGGTTCAGAGGTAGATGGTCTTGATATCAATGACTGCAACCGTCCTTTACTCAAATACATAAGTGATATTCTTCTAGAAGAAGACTTGGAGGGTAAGCCTTGCATGTTGCAGGACTGTTTAGCCCTCCAAGCTGCTGAGAAGTCTTTCTCTGATGTCCTTAATCAGAAGGACCCTCCTTTACCCAACCAACCTTCTAGTTTTGTGCACCAAAGCTCTGAGAGCTCAGATGATGATTCCCCACAGAGTTTCCGAAACAGTAATGGCTCTTTTGCTGTTAAGACAGATTGGGTTTGGGATCCGGAATGCTTTCCCGTCCAATCTTCTCTATTTGAGTCTTCGTCGAATACTCGTTTGGTTTCTGATTCATTGTCTGAGATGCAACGTCTTGGGAATTTTGGAGGTGTGGGGGAAGCAAGCAAGTTCCTTTCAAATCCGAAACTTGAAATGTTTGACTTAGAGAGGTTTCAATTGATGCCTCAAGGTTCAGTTGCATCTGAGTCAGGGGCTGATGGCTATAACTCAACCAATGTATCGAAGGGAAAGAAGACTCATCAAAGGGAGGATAGTCATTTTCCAGAAGAAGAGAGAAGCAACAAGCAGTCTGCTGCTGTAGGGGACGACTTTGAGCCACAAGAAATGTTTGATGAGGTTTTGCTTTGTCCTGAAAATCCTGATGCTAAGCTTTGTGCTGATTATGAGTCTTTGAAAACTGAAGGAGATGGGAAGTTGCAGCGTAACAAGCAGTCAAAAGGATTGAAGGCAAAGCGACAGAGTAACATTGGTGAGGTGGTAGATTTGTGCACAATGCTAACTCAATGTGCACAAGCTGTGGCGAACTTTGACCAACGAACTGCAAGTGAACTACTCAAGCAGATAAGGCAGCACACAACCCCCCATGGTGATGCAACCCAGAGGTTAGCCCATTACTTTGCTGATGGCCTCCACGCTCGGTTGGCTGGTGCCAAAACCCCATCATATTCGCCTCTTGTAAGTGTGCAGACATCAGCTGCTGAAATCTTAAAAGCATACCGGGTAGTTATTACAGGATGCCCTTTCAAGAAGATGTCACAATTCTTTGCCAACAAAACAATCATGAAACTAGCAGAAAAAGCAACAAGGCTTCACATTATTGATTTTGGTATTTCTTATGGATTTCAATGGCCTTGCCTGATCCAACGTCTGTCCCAAAGACCTGGTGGACCTCCTAAGCTTCGTATCACAGCCATTGAGCTTCCCCAACCAGGTTTTCGACCTACAGAAAGAGTTGAAGAGACTGGACGTCGCTTAGAAAAATATGCCAAGAGATTTGATGTCCCATTTGAGTATAATGTCATTGCCCAAAAATGGGAAACTATCCGAATTGAGGACATCAAAATTGACAGAACTGAGCTGATTGTGGTCAATTGTTTGCACCGGCCAAGGAACATACCAGATGAGACGGTGATGGTGAACAGTCCAAGAGATGCTGTCCTTAAGTTGATGAGGAAAATTAGTCCAGACCTTTTCATTCATGGTGTTGTCAATGGGACATACAATGCTGCTCCCTTCTTTCTCACACGATTTAGAGAGGCACTCCTCCACTTCTATTCACTGTTTGATATGTTTGAGGCGACCATCTCTCGTGAAGATGAACAGCGGCTGATGTTTGAACATGCAATATATGGTAGAGATATAATTAATGTCGTAGCTTGTGAAGGACTGGAAAGAGTTGAAAGGCCTGAAACATACAGGCAGTGGCAGGTCAGGAATTTGAGGGCTGGGTTCAAGCAGCTACCATTAAACCAGAAGCTGTTGAAGGAAGTGAAGACTATGTCAAAAGTAATGCGTTATCATGATGATTTTAGAGTTGATGAAGATGGCCATTGGATGCTGCAGGGATGGAAAGGAAGAACCCTCATGGCTCTTTCTTTTTGGAAGCCTACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS RVT_2

Protein Analysis

703

Amino Acids

79.58

Weight (kDa)

6.04

Isoelectric Point (pI)

46.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 329 - 700 1.8e-117 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000175)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1465
Acc36I ACCTGC 1 cut(s) 1912
AccB1I GGYRCC 1 cut(s) 1142
AccIII TCCGGA 1 cut(s) 481
AciI CCGC 1 cut(s) 1819
AclWI GGATC 3 cut(s) 473, 486, 1348
AcoI YGGCCR 2 cut(s) 1598, 2041
AcsI RAATTY 3 cut(s) 71, 574, 1930
AcuI CTGAAG 1 cut(s) 915
AcyI GRCGYC 1 cut(s) 1462
AfiI CCNNNNNNNGG 6 cut(s) 63, 85, 1424, 1527, 1528, 1546
AflII CTTAAG 1 cut(s) 1655
AhdI GACNNNNNGTC 1 cut(s) 1461
AjnI CCWGG 2 cut(s) 1375, 1423
AjuI GAANNNNNNNTTGG 6 cut(s) 145, 177, 518, 550, 1413, 1445
Alw21I GWGCWC 4 cut(s) 390, 407, 986, 1006
Alw26I GTCTC 3 cut(s) 52, 1448, 1613
Alw44I GTGCAC 3 cut(s) 386, 982, 1002
AlwI GGATC 3 cut(s) 473, 486, 1348
AlwNI CAGNNNCTG 4 cut(s) 689, 1193, 1822, 1972
Aor13HI TCCGGA 1 cut(s) 481
AoxI GGCC 6 cut(s) 82, 1120, 1343, 1598, 1898, 2041
ApaLI GTGCAC 3 cut(s) 386, 982, 1002
ApeKI GCWGC 8 cut(s) 314, 788, 913, 1063, 1190, 1721, 1951, 2053
ApoI RAATTY 3 cut(s) 71, 574, 1930
AseI ATTAAT 1 cut(s) 1860
Asp700I GAANNNNTTC 2 cut(s) 326, 489
AspS9I GGNCC 3 cut(s) 83, 352, 1382
AsuC2I CCSGG 2 cut(s) 86, 1214
AsuHPI GGTGA 4 cut(s) 977, 1094, 1636, 1642
AvaII GGWCC 2 cut(s) 352, 1382
BaeGI GKGCMC 3 cut(s) 390, 986, 1006
BaeI ACNNNNGTAYC 2 cut(s) 696, 729
BalI TGGCCA 1 cut(s) 2043
BamHI GGATCC 1 cut(s) 478
BanI GGYRCC 1 cut(s) 1142
BanII GRGCYC 1 cut(s) 407
BauI CACGAG 1 cut(s) 1803
BbsI GAAGAC 4 cut(s) 270, 510, 734, 1994
Bbv12I GWGCWC 4 cut(s) 390, 407, 986, 1006
BbvI GCAGC 8 cut(s) 301, 775, 925, 1075, 1177, 1708, 1963, 2040
BccI CCATC 9 cut(s) 191, 686, 896, 1112, 1162, 1621, 1805, 2033, 2055
BciT130I CCWGG 2 cut(s) 1377, 1425
BcnI CCSGG 2 cut(s) 86, 1214
BcoDI GTCTC 3 cut(s) 52, 1448, 1613
BfaI CTAG 5 cut(s) 165, 257, 378, 1283, 2107
BfmI CTRYAG 3 cut(s) 792, 1437, 2054
BfrI CTTAAG 1 cut(s) 1655
BfuAI ACCTGC 1 cut(s) 1912
BisI GCNGC 9 cut(s) 315, 789, 914, 1064, 1191, 1722, 1820, 1952, 2054
BlpI GCTNAGC 1 cut(s) 861
BlsI GCNGC 9 cut(s) 316, 790, 915, 1065, 1192, 1723, 1821, 1953, 2055
Bme1390I CCNGG 4 cut(s) 86, 1214, 1377, 1425
Bme18I GGWCC 2 cut(s) 352, 1382
BmeRI GACNNNNNGTC 1 cut(s) 1461
BmgT120I GGNCC 3 cut(s) 83, 352, 1382
BmiI GGNNCC 3 cut(s) 354, 480, 1144
BmrFI CCNGG 4 cut(s) 86, 1214, 1377, 1425
BmsI GCATC 8 cut(s) 549, 645, 683, 847, 1075, 1220, 1636, 2040
BpiI GAAGAC 4 cut(s) 270, 510, 734, 1994
BplI GAGNNNNNCTC 2 cut(s) 1740, 1772
Bpu10I CCTNAGC 1 cut(s) 1389
Bpu1102I GCTNAGC 1 cut(s) 861
BpuEI CTTGAG 2 cut(s) 645, 1034
BpuMI CCSGG 2 cut(s) 86, 1214
BsaHI GRCGYC 1 cut(s) 1462
BsaJI CCNNGG 4 cut(s) 57, 79, 1078, 1601
BsaWI WCCGGW 1 cut(s) 481
Bsc4I CCNNNNNNNGG 6 cut(s) 63, 85, 1424, 1527, 1528, 1546
Bse118I RCCGGY 1 cut(s) 1596
Bse1I ACTGG 2 cut(s) 1462, 1887
Bse3DI GCAATG 1 cut(s) 1515
BseAI TCCGGA 1 cut(s) 481
BseBI CCWGG 2 cut(s) 1377, 1425
BseDI CCNNGG 4 cut(s) 57, 79, 1078, 1601
BseGI GGATG 3 cut(s) 1235, 2055, 2066
BseLI CCNNNNNNNGG 6 cut(s) 63, 85, 1424, 1527, 1528, 1546
BseMI GCAATG 1 cut(s) 1515
BseMII CTCAG 6 cut(s) 309, 390, 420, 546, 669, 1560
BseNI ACTGG 2 cut(s) 1462, 1887
BseRI GAGGAG 1 cut(s) 1748
BseSI GKGCMC 3 cut(s) 390, 986, 1006
BseXI GCAGC 8 cut(s) 301, 775, 925, 1075, 1177, 1708, 1963, 2040
BseYI CCCAGC 1 cut(s) 1940
BsgI GTGCAG 1 cut(s) 1199
BshFI GGCC 6 cut(s) 84, 1122, 1345, 1600, 1900, 2043
BshNI GGYRCC 1 cut(s) 1142
BsiHKAI GWGCWC 4 cut(s) 390, 407, 986, 1006
BsiSI CCGG 4 cut(s) 86, 482, 1213, 1597
BslFI GGGAC 4 cut(s) 812, 1351, 1481, 1723
BslI CCNNNNNNNGG 6 cut(s) 63, 85, 1424, 1527, 1528, 1546
BsmAI GTCTC 3 cut(s) 52, 1448, 1613
BsmBI CGTCTC 1 cut(s) 1613
BsmFI GGGAC 4 cut(s) 812, 1351, 1481, 1723
BsmI GAATGC 1 cut(s) 491
BsnI GGCC 6 cut(s) 84, 1122, 1345, 1600, 1900, 2043
Bsp1286I GDGCHC 4 cut(s) 390, 407, 986, 1006
Bsp13I TCCGGA 1 cut(s) 481
Bsp143I GATC 2 cut(s) 478, 1353
Bsp1720I GCTNAGC 1 cut(s) 861
Bsp19I CCATGG 3 cut(s) 57, 79, 1078
BspACI CCGC 1 cut(s) 1819
BspANI GGCC 6 cut(s) 84, 1122, 1345, 1600, 1900, 2043
BspCNI CTCAG 6 cut(s) 310, 391, 419, 547, 670, 1561
BspEI TCCGGA 1 cut(s) 481
BspHI TCATGA 3 cut(s) 136, 1275, 2014
BspLI GGNNCC 3 cut(s) 354, 480, 1144
BspMAI CTGCAG 1 cut(s) 2058
BspMI ACCTGC 1 cut(s) 1912
BspPI GGATC 3 cut(s) 473, 486, 1348
BspT107I GGYRCC 1 cut(s) 1142
BspTI CTTAAG 1 cut(s) 1655
BsrDI GCAATG 1 cut(s) 1515
BsrFI RCCGGY 1 cut(s) 1596
BsrI ACTGG 2 cut(s) 1462, 1887
BssAI RCCGGY 1 cut(s) 1596
BssECI CCNNGG 4 cut(s) 57, 79, 1078, 1601
BssMI GATC 2 cut(s) 478, 1353
BssNI GRCGYC 1 cut(s) 1462
BssSI CACGAG 1 cut(s) 1803
BssT1I CCWWGG 4 cut(s) 57, 79, 1078, 1601
Bst2BI CACGAG 1 cut(s) 1803
Bst2UI CCWGG 2 cut(s) 1377, 1425
Bst4CI ACNGT 6 cut(s) 224, 299, 440, 1624, 1637, 1776
Bst6I CTCTTC 2 cut(s) 759, 1446
BstACI GRCGYC 1 cut(s) 1462
BstAFI CTTAAG 1 cut(s) 1655
BstC8I GCNNGC 1 cut(s) 598
BstDSI CCRYGG 3 cut(s) 57, 79, 1078
BstF5I GGATG 3 cut(s) 1235, 2055, 2066
BstKTI GATC 2 cut(s) 481, 1356
BstMAI GTCTC 3 cut(s) 52, 1448, 1613
BstMBI GATC 2 cut(s) 478, 1353
BstMWI GCNNNNNNNGC 6 cut(s) 311, 402, 922, 1060, 1136, 1292
BstNI CCWGG 2 cut(s) 1377, 1425
BstNSI RCATGY 2 cut(s) 289, 1838
BstSCI CCNGG 4 cut(s) 84, 1212, 1375, 1423
BstSFI CTRYAG 3 cut(s) 792, 1437, 2054
BstSLI GKGCMC 3 cut(s) 390, 986, 1006
BstV1I GCAGC 8 cut(s) 301, 775, 925, 1075, 1177, 1708, 1963, 2040
BstV2I GAAGAC 4 cut(s) 270, 510, 734, 1994
BstX2I RGATCY 1 cut(s) 478
BstXI CCANNNNNNTGG 2 cut(s) 58, 1376
BstYI RGATCY 1 cut(s) 478
BsuRI GGCC 6 cut(s) 84, 1122, 1345, 1600, 1900, 2043
BtgI CCRYGG 3 cut(s) 57, 79, 1078
BtsCI GGATG 3 cut(s) 1235, 2055, 2066
BtsI GCAGTG 1 cut(s) 1922
BtsIMutI CAGTG 2 cut(s) 1772, 1922
BveI ACCTGC 1 cut(s) 1912
Cac8I GCNNGC 1 cut(s) 598
CaiI CAGNNNCTG 4 cut(s) 689, 1193, 1822, 1972
CciI TCATGA 3 cut(s) 136, 1275, 2014
Cfr10I RCCGGY 1 cut(s) 1596
Cfr13I GGNCC 3 cut(s) 83, 352, 1382
CsiI ACCWGGT 2 cut(s) 1375, 1423
DpnI GATC 2 cut(s) 480, 1355
DpnII GATC 2 cut(s) 478, 1353
DriI GACNNNNNGTC 1 cut(s) 1461
EaeI YGGCCR 2 cut(s) 1598, 2041
Eam1104I CTCTTC 2 cut(s) 759, 1446
Eam1105I GACNNNNNGTC 1 cut(s) 1461
EarI CTCTTC 2 cut(s) 759, 1446
Ecl136II GAGCTC 1 cut(s) 405
Eco130I CCWWGG 4 cut(s) 57, 79, 1078, 1601
Eco147I AGGCCT 1 cut(s) 1900
Eco24I GRGCYC 1 cut(s) 407
Eco32I GATATC 1 cut(s) 208
Eco47I GGWCC 2 cut(s) 352, 1382
Eco53kI GAGCTC 1 cut(s) 405
Eco57I CTGAAG 1 cut(s) 915
EcoICRI GAGCTC 1 cut(s) 405
EcoO109I RGGNCCY 1 cut(s) 352
EcoRII CCWGG 2 cut(s) 1375, 1423
EcoRV GATATC 1 cut(s) 208
EcoT14I CCWWGG 4 cut(s) 57, 79, 1078, 1601
EcoT38I GRGCYC 1 cut(s) 407
ErhI CCWWGG 4 cut(s) 57, 79, 1078, 1601
Esp3I CGTCTC 1 cut(s) 1613
FaqI GGGAC 4 cut(s) 812, 1351, 1481, 1723
Fnu4HI GCNGC 9 cut(s) 315, 789, 914, 1064, 1191, 1722, 1820, 1952, 2054
FokI GGATG 3 cut(s) 1242, 2062, 2073
FriOI GRGCYC 1 cut(s) 407
Fsp4HI GCNGC 9 cut(s) 315, 789, 914, 1064, 1191, 1722, 1820, 1952, 2054
FspBI CTAG 5 cut(s) 165, 257, 378, 1283, 2107
GluI GCNGC 9 cut(s) 315, 789, 914, 1064, 1191, 1722, 1820, 1952, 2054
GsaI CCCAGC 1 cut(s) 1944
HaeIII GGCC 6 cut(s) 84, 1122, 1345, 1600, 1900, 2043
HapII CCGG 4 cut(s) 86, 482, 1213, 1597
Hin1I GRCGYC 1 cut(s) 1462
HindIII AAGCTT 2 cut(s) 863, 1391
HinfI GANTC 8 cut(s) 20, 140, 416, 515, 545, 680, 730, 881
HpaII CCGG 4 cut(s) 86, 482, 1213, 1597
HphI GGTGA 4 cut(s) 977, 1094, 1636, 1642
Hpy166II GTNNAC 6 cut(s) 388, 984, 1004, 1043, 1382, 1633
Hpy8I GTNNAC 6 cut(s) 388, 984, 1004, 1043, 1382, 1633
Hpy99I CGWCG 2 cut(s) 526, 1467
HpyAV CCTTC 8 cut(s) 343, 384, 712, 890, 934, 1738, 1871, 1972
HpyCH4III ACNGT 6 cut(s) 224, 299, 440, 1624, 1637, 1776
HpyCH4IV ACGT 3 cut(s) 565, 1360, 1462
HpyF10VI GCNNNNNNNGC 6 cut(s) 311, 402, 922, 1060, 1136, 1292
HpySE526I ACGT 3 cut(s) 565, 1360, 1462
Hsp92I GRCGYC 1 cut(s) 1462
Kpn2I TCCGGA 1 cut(s) 481
Kzo9I GATC 2 cut(s) 478, 1353
LmnI GCTCC 1 cut(s) 1729
Lsp1109I GCAGC 8 cut(s) 301, 775, 925, 1075, 1177, 1708, 1963, 2040
LweI GCATC 8 cut(s) 549, 645, 683, 847, 1075, 1220, 1636, 2040
MabI ACCWGGT 2 cut(s) 1375, 1423
MaeI CTAG 5 cut(s) 165, 257, 378, 1283, 2107
MaeII ACGT 3 cut(s) 565, 1360, 1462
MaeIII GTNAC 3 cut(s) 917, 956, 1248
MalI GATC 2 cut(s) 480, 1355
MboI GATC 2 cut(s) 478, 1353
MfeI CAATTG 2 cut(s) 650, 1585
MflI RGATCY 1 cut(s) 478
MhlI GDGCHC 4 cut(s) 390, 407, 986, 1006
MlsI TGGCCA 1 cut(s) 2043
MluNI TGGCCA 1 cut(s) 2043
MlyI GAGTC 4 cut(s) 524, 689, 724, 890
MmeI TCCRAC 1 cut(s) 1381
Mox20I TGGCCA 1 cut(s) 2043
MroI TCCGGA 1 cut(s) 481
MroXI GAANNNNTTC 2 cut(s) 326, 489
MscI TGGCCA 1 cut(s) 2043
MseI TTAA 6 cut(s) 342, 459, 1202, 1656, 1860, 1961
MslI CAYNNNNRTG 1 cut(s) 1083
Msp20I TGGCCA 1 cut(s) 2043
MspA1I CMGCKG 2 cut(s) 1190, 1819
MspCI CTTAAG 1 cut(s) 1655
MspI CCGG 4 cut(s) 86, 482, 1213, 1597
MspR9I CCNGG 4 cut(s) 86, 1214, 1377, 1425
MunI CAATTG 2 cut(s) 650, 1585
Mva1269I GAATGC 1 cut(s) 491
MvaI CCWGG 2 cut(s) 1377, 1425
MwoI GCNNNNNNNGC 6 cut(s) 311, 402, 922, 1060, 1136, 1292
NciI CCSGG 2 cut(s) 86, 1214
NcoI CCATGG 3 cut(s) 57, 79, 1078
NdeII GATC 2 cut(s) 478, 1353
NlaIV GGNNCC 3 cut(s) 354, 480, 1144
NmuCI GTSAC 1 cut(s) 1248
NspI RCATGY 2 cut(s) 289, 1838
PagI TCATGA 3 cut(s) 136, 1275, 2014
PceI AGGCCT 1 cut(s) 1900
PctI GAATGC 1 cut(s) 491
PdmI GAANNNNTTC 2 cut(s) 326, 489
PfeI GAWTC 4 cut(s) 20, 140, 416, 545
PflFI GACNNNGTC 1 cut(s) 1993
PkrI GCNGC 9 cut(s) 316, 790, 915, 1065, 1192, 1723, 1821, 1953, 2055
PleI GAGTC 4 cut(s) 523, 688, 724, 889
PpsI GAGTC 4 cut(s) 523, 688, 724, 889
PpuMI RGGWCCY 1 cut(s) 352
PshBI ATTAAT 1 cut(s) 1860
Psp124BI GAGCTC 1 cut(s) 407
Psp5II RGGWCCY 1 cut(s) 352
Psp6I CCWGG 2 cut(s) 1375, 1423
PspFI CCCAGC 1 cut(s) 1940
PspGI CCWGG 2 cut(s) 1375, 1423
PspN4I GGNNCC 3 cut(s) 354, 480, 1144
PspPI GGNCC 3 cut(s) 83, 352, 1382
PspPPI RGGWCCY 1 cut(s) 352
PsrI GAACNNNNNNTAC 2 cut(s) 169, 201
PstI CTGCAG 1 cut(s) 2058
PstNI CAGNNNCTG 4 cut(s) 689, 1193, 1822, 1972
PsuI RGATCY 1 cut(s) 478
PsyI GACNNNGTC 1 cut(s) 1993
PvuII CAGCTG 1 cut(s) 1190
RseI CAYNNNNRTG 1 cut(s) 1083
SacI GAGCTC 1 cut(s) 407
SaqAI TTAA 6 cut(s) 342, 459, 1202, 1656, 1860, 1961
SatI GCNGC 9 cut(s) 315, 789, 914, 1064, 1191, 1722, 1820, 1952, 2054
Sau3AI GATC 2 cut(s) 478, 1353
Sau96I GGNCC 3 cut(s) 83, 352, 1382
SchI GAGTC 4 cut(s) 524, 689, 724, 890
ScrFI CCNGG 4 cut(s) 86, 1214, 1377, 1425
SduI GDGCHC 4 cut(s) 390, 407, 986, 1006
SexAI ACCWGGT 2 cut(s) 1375, 1423
SfaNI GCATC 8 cut(s) 549, 645, 683, 847, 1075, 1220, 1636, 2040
SfcI CTRYAG 3 cut(s) 792, 1437, 2054
SinI GGWCC 2 cut(s) 352, 1382
SmiMI CAYNNNNRTG 1 cut(s) 1083
SmlI CTYRAG 4 cut(s) 11, 660, 1049, 1655
SmoI CTYRAG 4 cut(s) 11, 660, 1049, 1655
SseBI AGGCCT 1 cut(s) 1900
SsiI CCGC 1 cut(s) 1819
SspMI CTAG 5 cut(s) 165, 257, 378, 1283, 2107
SstI GAGCTC 1 cut(s) 407
StuI AGGCCT 1 cut(s) 1900
StyD4I CCNGG 4 cut(s) 84, 1212, 1375, 1423
StyI CCWWGG 4 cut(s) 57, 79, 1078, 1601
TaaI ACNGT 6 cut(s) 224, 299, 440, 1624, 1637, 1776
TaiI ACGT 3 cut(s) 568, 1363, 1465
TaqI TCGA 3 cut(s) 524, 716, 1432
TauI GCSGC 1 cut(s) 1822
TfiI GAWTC 4 cut(s) 20, 140, 416, 545
Tru1I TTAA 6 cut(s) 342, 459, 1202, 1656, 1860, 1961
Tru9I TTAA 6 cut(s) 342, 459, 1202, 1656, 1860, 1961
TscAI CASTG 2 cut(s) 1779, 1922
TseFI GTSAC 1 cut(s) 1248
TseI GCWGC 8 cut(s) 314, 788, 913, 1063, 1190, 1721, 1951, 2053
Tsp45I GTSAC 1 cut(s) 1248
TspDTI ATGAA 7 cut(s) 153, 537, 1292, 1678, 1682, 1827, 2049
TspRI CASTG 2 cut(s) 1779, 1922
Tth111I GACNNNGTC 1 cut(s) 1993
Vha464I CTTAAG 1 cut(s) 1655
VneI GTGCAC 3 cut(s) 386, 982, 1002
VpaK11BI GGWCC 2 cut(s) 352, 1382
VspI ATTAAT 1 cut(s) 1860
XapI RAATTY 3 cut(s) 71, 574, 1930
XbaI TCTAGA 1 cut(s) 256
XceI RCATGY 2 cut(s) 289, 1838
XcmI CCANNNNNNNNNTGG 1 cut(s) 1376
XmnI GAANNNNTTC 2 cut(s) 326, 489
XspI CTAG 5 cut(s) 165, 257, 378, 1283, 2107
ZraI GACGTC 1 cut(s) 1463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.