Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000175

Physical Location & Seq

Genomic Coordinates Reverse (-)

5020790 .. 5022844

Gene Structure 2055 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G073600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGAAGAACTTAATTTTGGCCATGGCTCAAATTCAGTCTCTTCTGATCAAAACCTTGTAAATGGGCTCCAAGTAAATCATGAACCCACCAATAAACTTCTTCTTCCAGCCAACTTAGACCGTCCTAGTGATTCAGGCACTTCTTCAGAGGGTGATACTGTTGACAGTAGTGACTGCAATCTTCCTGTGCTCAAGTACATAAGTGATATTCTTCTAGAAGAAGACCTGGAGGGTAAGCCCTGCATGTTGGAGGACATTTTGGGCCTCCAAGCTGCTGAAAAATCTTTCTATGATGCCCTTAATCAGAAGGATCCTCCTTTACCTAACCAACCCTCTTTCTCTGTGTATCAAAGCTTTGAGAACTCAGATGGTGGTTTTCAAAGCAGTAATGGCTCTATTGCTGCTAAGACAGGCAGCGTTTGGGATTTTTCAGAAACATCTCATGTCCAAACTTCTCCTGTTGAGTCTCTCTCTGATACAGCTTTGGTTTCAGATTCATTTTCTGATATGCAAAGTCTTGGGAATTTTAGAGGTGTAGGGGAAGGAAATGAAATCATTGACCTTGAGGGGTACCAGTGTACACCTCCAGGTCCTAACACACTGTACAGGAATTTGGCATCCGTGCCAGAGAATTATGGCTACAACTCAACAAATGGATCAAAGGGAAAGAAGAATCATCAAAGGGAGGAAGGTCATTACACAGAAGAAGGGAGAAGCAACAAGCAGTCAGCTGCTTTTGCTGACGATTCTGATCTCCAAGAAATGTTTGATAAGGTATTACAGGGTGTGAATCCTGAATCCGAGTCCTGTTTTCATGATGAATCTTTAAACGCTGAGGGAACTAGGAAGTTGCAGCACAACAAGCAGTCAAAAGGATCTAAGACAACATGTTCAAAGAAACCGAACAGCAACCGGCAAGTAGTAGACTTGTGCAAACTGCTAACTGAATGTGCACAAGCTGTGGGAAGCTATGACCAACAATCTGCAAGTGAACTTCTCAAGCAGATAAGACAGCATTCTTCCCCCTATGGTTATGCAACCCAGAGATTAGCTCATTACTTTGCCGAAGGCCTAGAGGCACGCTTGGCTGGTGCGAGATCCCTATCATATCCACCTCTTCTATTTATGCACGCATCAACTACCGAAATCTTAAAAGCGTATCAGGTGTATGTTTCTGCATGCCCCTTCAAGAAGATGTTACACTTCTTTGCCAACAGAACAATTATGAAACAAACAGAGAAGGCAACGAGGCTTCACATTATTGATTTTGGTATTTCTTATGGTTTACAATGGCCCTGCCTTATCCAAAGTCTCTCAGAGAAAGCTGGTGGACCTCCTAATCTTCGTATCACAGCAATTGAGCTTCCCCAACCAGGTTTTCGACCAGCCGAAAGAATTGAAGAGACAGGGCGCCGCTTAGCTAAATATTCTAAGAGGTATGGTGTCCCATTTGAGTATAATGTCATTGCTAAGAAATGGGAAACCATCCGACTGGAGGAACTTCAAATTGACAGAAATGAAGTGATTGTGGTTAACTGTATGCACCGGTTGAAGCAAATTCCTGATGAAACAGTAATGATGAACAATCCAAGAGACGCCGTCTTAAATTTGATTAAGAGAATTAATCCAGACCTTTTCATGCATGGGGTTGTCAATGGGACATACAATGCACCTGCCTTTGTCACACGGTTCAAACAGTTGCTCTTCCACTTCCAAGCGCTATTCGATATGTATGAGGCCACTGTCCCTCGCGAAGATGAACATCGGTTGTTGTTCGAAAGAGCAATATTTGGCAGGGACATAATGAATGTAATAGCGTGTGAGGGACTGGAAAGAGTTGAAAGGCCTGAGACATACAAGCAGTGGCAGGCTAGGTATGTGAGGGCTGGGTTCAAGCAGCTCCCATTAGACCGGGAGCTCTTTAAGAAAGTGAAGACTATGTCGAAGATGATGGGGTATCATAAGGATTTTGGAATTGAAGATGATGGTGAGTGGATGCTGCAGGGATGGAAAGGAAGGATTATCTTAGCTCTTTCTGCTTTGAAGCCTGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

685

Amino Acids

77.02

Weight (kDa)

5.8

Isoelectric Point (pI)

52.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000175)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca	FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica	MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica	Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis	pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis	RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata	RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora	Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa	Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha	Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana	Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1681
Acc36I	ACCTGC	1 cut(s)	1681
Acc65I	GGTACC	1 cut(s)	570
AccB1I	GGYRCC	2 cut(s)	570, 1410
AccI	GTMKAC	1 cut(s)	924
AccII	CGCG	1 cut(s)	1752
AciI	CCGC	1 cut(s)	1414
AclWI	GGATC	5 cut(s)	305, 318, 664, 883, 1092
AcoI	YGGCCR	1 cut(s)	19
AcsI	RAATTY	5 cut(s)	31, 523, 610, 1557, 1606
AcuI	CTGAAG	1 cut(s)	129
AcyI	GRCGYC	2 cut(s)	1411, 1596
AfaI	GTAC	4 cut(s)	197, 572, 580, 605
AfeI	AGCGCT	1 cut(s)	1719
AfiI	CCNNNNNNNGG	2 cut(s)	1373, 1495
AflIII	ACRYGT	1 cut(s)	887
AgeI	ACCGGT	1 cut(s)	1545
AjnI	CCWGG	3 cut(s)	225, 586, 1372
AjuI	GAANNNNNNNTTGG	3 cut(s)	32, 1362, 1394
Alw21I	GWGCWC	3 cut(s)	192, 955, 1920
Alw26I	GTCTC	6 cut(s)	43, 471, 1316, 1397, 1587, 1844
Alw44I	GTGCAC	1 cut(s)	951
AlwI	GGATC	5 cut(s)	305, 318, 664, 883, 1092
Aor51HI	AGCGCT	1 cut(s)	1719
AoxI	GGCC	6 cut(s)	19, 262, 1069, 1292, 1737, 1844
ApaLI	GTGCAC	1 cut(s)	951
ApeKI	GCWGC	7 cut(s)	272, 401, 414, 731, 853, 1897, 1999
ApoI	RAATTY	5 cut(s)	31, 523, 610, 1557, 1606
AseI	ATTAAT	1 cut(s)	1623
AsiGI	ACCGGT	1 cut(s)	1545
Asp718I	GGTACC	1 cut(s)	570
AspLEI	GCGC	2 cut(s)	1413, 1720
AspS9I	GGNCC	4 cut(s)	262, 590, 1293, 1331
AsuC2I	CCSGG	1 cut(s)	1913
AsuHPI	GGTGA	2 cut(s)	164, 2000
AsuII	TTCGAA	1 cut(s)	1776
AvaII	GGWCC	2 cut(s)	590, 1331
BaeGI	GKGCMC	1 cut(s)	955
BaeI	ACNNNNGTAYC	2 cut(s)	562, 595
BalI	TGGCCA	1 cut(s)	21
BamHI	GGATCC	1 cut(s)	310
BanI	GGYRCC	2 cut(s)	570, 1410
BanII	GRGCYC	2 cut(s)	69, 1920
BbsI	GAAGAC	2 cut(s)	228, 1940
Bbv12I	GWGCWC	3 cut(s)	192, 955, 1920
BbvCI	CCTCAGC	1 cut(s)	834
BbvI	GCAGC	7 cut(s)	259, 388, 426, 718, 865, 1909, 1986
BccI	CCATC	5 cut(s)	362, 1493, 1945, 1979, 2001
BceAI	ACGGC	1 cut(s)	1583
BciT130I	CCWGG	3 cut(s)	227, 588, 1374
BclI	TGATCA	1 cut(s)	46
BcnI	CCSGG	1 cut(s)	1913
BcoDI	GTCTC	6 cut(s)	43, 471, 1316, 1397, 1587, 1844
BfaI	CTAG	5 cut(s)	126, 215, 843, 1073, 1872
BfmI	CTRYAG	1 cut(s)	2000
BfoI	RGCGCY	2 cut(s)	1414, 1721
BfuAI	ACCTGC	1 cut(s)	1681
BisI	GCNGC	8 cut(s)	273, 402, 415, 732, 854, 1414, 1898, 2000
BlpI	GCTNAGC	1 cut(s)	1417
BlsI	GCNGC	8 cut(s)	274, 403, 416, 733, 855, 1415, 1899, 2001
Bme1390I	CCNGG	4 cut(s)	227, 588, 1374, 1913
Bme18I	GGWCC	2 cut(s)	590, 1331
BmgT120I	GGNCC	4 cut(s)	262, 590, 1293, 1331
BmiI	GGNNCC	4 cut(s)	68, 312, 572, 1412
BmrFI	CCNGG	4 cut(s)	227, 588, 1374, 1913
BmsI	GCATC	4 cut(s)	283, 626, 1142, 1986
BpiI	GAAGAC	2 cut(s)	228, 1940
BplI	GAGNNNNNCTC	4 cut(s)	455, 487, 1036, 1068
BpmI	CTGGAG	3 cut(s)	248, 570, 1514
Bpu10I	CCTNAGC	1 cut(s)	834
Bpu1102I	GCTNAGC	1 cut(s)	1417
Bpu14I	TTCGAA	1 cut(s)	1776
BpuEI	CTTGAG	3 cut(s)	176, 584, 983
BpuMI	CCSGG	1 cut(s)	1913
BsaBI	GATNNNNATC	3 cut(s)	750, 1102, 1761
BsaHI	GRCGYC	2 cut(s)	1411, 1596
BsaJI	CCNNGG	1 cut(s)	22
BsaWI	WCCGGW	1 cut(s)	1545
Bsc4I	CCNNNNNNNGG	2 cut(s)	1373, 1495
Bse118I	RCCGGY	2 cut(s)	912, 1545
Bse1I	ACTGG	3 cut(s)	574, 1497, 1833
Bse3DI	GCAATG	1 cut(s)	1464
Bse8I	GATNNNNATC	3 cut(s)	750, 1102, 1761
BseBI	CCWGG	3 cut(s)	227, 588, 1374
BseDI	CCNNGG	1 cut(s)	22
BseGI	GGATG	4 cut(s)	617, 1485, 2001, 2012
BseJI	GATNNNNATC	3 cut(s)	750, 1102, 1761
BseLI	CCNNNNNNNGG	2 cut(s)	1373, 1495
BseMI	GCAATG	1 cut(s)	1464
BseMII	CTCAG	4 cut(s)	378, 825, 1329, 1839
BseNI	ACTGG	3 cut(s)	574, 1497, 1833
BseSI	GKGCMC	1 cut(s)	955
BseXI	GCAGC	7 cut(s)	259, 388, 426, 718, 865, 1909, 1986
BseYI	CCCAGC	1 cut(s)	1886
Bsh1236I	CGCG	1 cut(s)	1752
BshFI	GGCC	6 cut(s)	21, 264, 1071, 1294, 1739, 1846
BshNI	GGYRCC	2 cut(s)	570, 1410
BshTI	ACCGGT	1 cut(s)	1545
BsiHKAI	GWGCWC	3 cut(s)	192, 955, 1920
BsiSI	CCGG	3 cut(s)	913, 1546, 1912
BslFI	GGGAC	5 cut(s)	1430, 1672, 1730, 1811, 1839
BslI	CCNNNNNNNGG	2 cut(s)	1373, 1495
BsmAI	GTCTC	6 cut(s)	43, 471, 1316, 1397, 1587, 1844
BsmBI	CGTCTC	1 cut(s)	1587
BsmFI	GGGAC	5 cut(s)	1430, 1672, 1730, 1811, 1839
BsmI	GAATGC	1 cut(s)	1015
BsnI	GGCC	6 cut(s)	21, 264, 1071, 1294, 1739, 1846
Bsp119I	TTCGAA	1 cut(s)	1776
Bsp1286I	GDGCHC	4 cut(s)	69, 192, 955, 1920
Bsp1407I	TGTACA	2 cut(s)	578, 603
Bsp143I	GATC	6 cut(s)	46, 310, 656, 751, 875, 1097
Bsp1720I	GCTNAGC	1 cut(s)	1417
Bsp19I	CCATGG	1 cut(s)	22
Bsp68I	TCGCGA	1 cut(s)	1752
BspACI	CCGC	1 cut(s)	1414
BspANI	GGCC	6 cut(s)	21, 264, 1071, 1294, 1739, 1846
BspCNI	CTCAG	4 cut(s)	377, 826, 1328, 1840
BspFNI	CGCG	1 cut(s)	1752
BspHI	TCATGA	2 cut(s)	79, 814
BspLI	GGNNCC	4 cut(s)	68, 312, 572, 1412
BspMAI	CTGCAG	1 cut(s)	2004
BspMI	ACCTGC	1 cut(s)	1681
BspPI	GGATC	5 cut(s)	305, 318, 664, 883, 1092
BspQI	GCTCTTC	1 cut(s)	1709
BspT104I	TTCGAA	1 cut(s)	1776
BspT107I	GGYRCC	2 cut(s)	570, 1410
BsrDI	GCAATG	1 cut(s)	1464
BsrFI	RCCGGY	2 cut(s)	912, 1545
BsrGI	TGTACA	2 cut(s)	578, 603
BsrI	ACTGG	3 cut(s)	574, 1497, 1833
BssAI	RCCGGY	2 cut(s)	912, 1545
BssECI	CCNNGG	1 cut(s)	22
BssMI	GATC	6 cut(s)	46, 310, 656, 751, 875, 1097
BssNI	GRCGYC	2 cut(s)	1411, 1596
BssT1I	CCWWGG	1 cut(s)	22
Bst2UI	CCWGG	3 cut(s)	227, 588, 1374
Bst4CI	ACNGT	9 cut(s)	122, 160, 167, 603, 1538, 1573, 1689, 1698, 1744
Bst6I	CTCTTC	4 cut(s)	46, 1122, 1395, 1709
BstACI	GRCGYC	2 cut(s)	1411, 1596
BstAUI	TGTACA	2 cut(s)	578, 603
BstBI	TTCGAA	1 cut(s)	1776
BstC8I	GCNNGC	5 cut(s)	1081, 1131, 1180, 1869, 2049
BstDSI	CCRYGG	1 cut(s)	22
BstF5I	GGATG	4 cut(s)	617, 1485, 2001, 2012
BstFNI	CGCG	1 cut(s)	1752
BstH2I	RGCGCY	2 cut(s)	1414, 1721
BstHHI	GCGC	2 cut(s)	1413, 1720
BstKTI	GATC	6 cut(s)	49, 313, 659, 754, 878, 1100
BstMAI	GTCTC	6 cut(s)	43, 471, 1316, 1397, 1587, 1844
BstMBI	GATC	6 cut(s)	46, 310, 656, 751, 875, 1097
BstMWI	GCNNNNNNNGC	5 cut(s)	390, 737, 862, 1085, 2036
BstNI	CCWGG	3 cut(s)	227, 588, 1374
BstNSI	RCATGY	3 cut(s)	247, 891, 1182
BstSCI	CCNGG	4 cut(s)	225, 586, 1372, 1911
BstSFI	CTRYAG	1 cut(s)	2000
BstSLI	GKGCMC	1 cut(s)	955
BstUI	CGCG	1 cut(s)	1752
BstV1I	GCAGC	7 cut(s)	259, 388, 426, 718, 865, 1909, 1986
BstV2I	GAAGAC	2 cut(s)	228, 1940
BstX2I	RGATCY	3 cut(s)	310, 875, 1097
BstXI	CCANNNNNNTGG	1 cut(s)	1492
BstYI	RGATCY	3 cut(s)	310, 875, 1097
BsuRI	GGCC	6 cut(s)	21, 264, 1071, 1294, 1739, 1846
BtgI	CCRYGG	1 cut(s)	22
BtsCI	GGATG	4 cut(s)	617, 1485, 2001, 2012
BtsI	GCAGTG	1 cut(s)	1868
BtsIMutI	CAGTG	4 cut(s)	581, 599, 1740, 1868
BtuMI	TCGCGA	1 cut(s)	1752
BveI	ACCTGC	1 cut(s)	1681
Cac8I	GCNNGC	5 cut(s)	1081, 1131, 1180, 1869, 2049
CciI	TCATGA	2 cut(s)	79, 814
CfoI	GCGC	2 cut(s)	1413, 1720
Cfr10I	RCCGGY	2 cut(s)	912, 1545
Cfr13I	GGNCC	4 cut(s)	262, 590, 1293, 1331
CseI	GACGC	1 cut(s)	1604
CsiI	ACCWGGT	1 cut(s)	1372
Csp6I	GTAC	4 cut(s)	196, 571, 579, 604
CspAI	ACCGGT	1 cut(s)	1545
CviAII	CATG	9 cut(s)	23, 80, 244, 443, 815, 888, 1179, 1639, 1643
CviQI	GTAC	4 cut(s)	196, 571, 579, 604
DinI	GGCGCC	1 cut(s)	1412
DpnI	GATC	6 cut(s)	48, 312, 658, 753, 877, 1099
DpnII	GATC	6 cut(s)	46, 310, 656, 751, 875, 1097
DraI	TTTAAA	1 cut(s)	828
EaeI	YGGCCR	1 cut(s)	19
Eam1104I	CTCTTC	4 cut(s)	46, 1122, 1395, 1709
EarI	CTCTTC	4 cut(s)	46, 1122, 1395, 1709
Ecl136II	GAGCTC	1 cut(s)	1918
Eco130I	CCWWGG	1 cut(s)	22
Eco147I	AGGCCT	2 cut(s)	1071, 1846
Eco24I	GRGCYC	2 cut(s)	69, 1920
Eco47I	GGWCC	2 cut(s)	590, 1331
Eco47III	AGCGCT	1 cut(s)	1719
Eco53kI	GAGCTC	1 cut(s)	1918
Eco57I	CTGAAG	1 cut(s)	129
EcoICRI	GAGCTC	1 cut(s)	1918
EcoO109I	RGGNCCY	1 cut(s)	590
EcoRII	CCWGG	3 cut(s)	225, 586, 1372
EcoT14I	CCWWGG	1 cut(s)	22
EcoT22I	ATGCAT	1 cut(s)	1644
EcoT38I	GRGCYC	2 cut(s)	69, 1920
EgeI	GGCGCC	1 cut(s)	1412
EheI	GGCGCC	1 cut(s)	1412
ErhI	CCWWGG	1 cut(s)	22
Esp3I	CGTCTC	1 cut(s)	1587
FaeI	CATG	9 cut(s)	26, 83, 247, 446, 818, 891, 1182, 1642, 1646
FaqI	GGGAC	5 cut(s)	1430, 1672, 1730, 1811, 1839
FatI	CATG	9 cut(s)	22, 79, 243, 442, 814, 887, 1178, 1638, 1642
FbaI	TGATCA	1 cut(s)	46
FblI	GTMKAC	1 cut(s)	924
Fnu4HI	GCNGC	8 cut(s)	273, 402, 415, 732, 854, 1414, 1898, 2000
FokI	GGATG	4 cut(s)	604, 1472, 2008, 2019
FriOI	GRGCYC	2 cut(s)	69, 1920
Fsp4HI	GCNGC	8 cut(s)	273, 402, 415, 732, 854, 1414, 1898, 2000
FspBI	CTAG	5 cut(s)	126, 215, 843, 1073, 1872
GlaI	GCGC	2 cut(s)	1412, 1719
GluI	GCNGC	8 cut(s)	273, 402, 415, 732, 854, 1414, 1898, 2000
GsaI	CCCAGC	1 cut(s)	1890
GsuI	CTGGAG	3 cut(s)	248, 570, 1514
HaeII	RGCGCY	2 cut(s)	1414, 1721
HaeIII	GGCC	6 cut(s)	21, 264, 1071, 1294, 1739, 1846
HapII	CCGG	3 cut(s)	913, 1546, 1912
HgaI	GACGC	1 cut(s)	1604
HhaI	GCGC	2 cut(s)	1413, 1720
Hin1I	GRCGYC	2 cut(s)	1411, 1596
Hin1II	CATG	9 cut(s)	26, 83, 247, 446, 818, 891, 1182, 1642, 1646
Hin6I	GCGC	2 cut(s)	1411, 1718
HinP1I	GCGC	2 cut(s)	1411, 1718
HincII	GTYRAC	2 cut(s)	163, 1534
HindII	GTYRAC	2 cut(s)	163, 1534
HindIII	AAGCTT	1 cut(s)	352
HinfI	GANTC	9 cut(s)	131, 464, 494, 673, 746, 790, 797, 803, 821
HpaI	GTTAAC	1 cut(s)	1534
HpaII	CCGG	3 cut(s)	913, 1546, 1912
HphI	GGTGA	2 cut(s)	164, 2000
Hpy166II	GTNNAC	9 cut(s)	163, 579, 581, 925, 953, 992, 1286, 1331, 1534
Hpy188III	TCNNGA	8 cut(s)	80, 215, 794, 815, 1189, 1562, 1628, 1751
Hpy8I	GTNNAC	9 cut(s)	163, 579, 581, 925, 953, 992, 1286, 1331, 1534
HpyAV	CCTTC	8 cut(s)	301, 536, 683, 701, 1061, 1195, 1234, 2010
HpyCH4III	ACNGT	9 cut(s)	122, 160, 167, 603, 1538, 1573, 1689, 1698, 1744
HpyF10VI	GCNNNNNNNGC	5 cut(s)	390, 737, 862, 1085, 2036
Hsp92I	GRCGYC	2 cut(s)	1411, 1596
Hsp92II	CATG	9 cut(s)	26, 83, 247, 446, 818, 891, 1182, 1642, 1646
HspAI	GCGC	2 cut(s)	1411, 1718
KasI	GGCGCC	1 cut(s)	1410
KpnI	GGTACC	1 cut(s)	574
Ksp22I	TGATCA	1 cut(s)	46
KspAI	GTTAAC	1 cut(s)	1534
Kzo9I	GATC	6 cut(s)	46, 310, 656, 751, 875, 1097
LguI	GCTCTTC	1 cut(s)	1709
LmnI	GCTCC	3 cut(s)	72, 1905, 1915
Lsp1109I	GCAGC	7 cut(s)	259, 388, 426, 718, 865, 1909, 1986
LweI	GCATC	4 cut(s)	283, 626, 1142, 1986
MabI	ACCWGGT	1 cut(s)	1372
MaeI	CTAG	5 cut(s)	126, 215, 843, 1073, 1872
MaeIII	GTNAC	3 cut(s)	170, 1197, 1681
MalI	GATC	6 cut(s)	48, 312, 658, 753, 877, 1099
MboI	GATC	6 cut(s)	46, 310, 656, 751, 875, 1097
MfeI	CAATTG	1 cut(s)	1356
MflI	RGATCY	3 cut(s)	310, 875, 1097
MhlI	GDGCHC	4 cut(s)	69, 192, 955, 1920
MlsI	TGGCCA	1 cut(s)	21
MluNI	TGGCCA	1 cut(s)	21
Mly113I	GGCGCC	1 cut(s)	1411
MlyI	GAGTC	2 cut(s)	473, 812
MmeI	TCCRAC	2 cut(s)	228, 1513
Mox20I	TGGCCA	1 cut(s)	21
Mph1103I	ATGCAT	1 cut(s)	1644
MscI	TGGCCA	1 cut(s)	21
MseI	TTAA	9 cut(s)	12, 300, 827, 1151, 1533, 1604, 1614, 1623, 1923
Msp20I	TGGCCA	1 cut(s)	21
MspA1I	CMGCKG	1 cut(s)	731
MspI	CCGG	3 cut(s)	913, 1546, 1912
MspR9I	CCNGG	4 cut(s)	227, 588, 1374, 1913
MunI	CAATTG	1 cut(s)	1356
Mva1269I	GAATGC	1 cut(s)	1015
MvaI	CCWGG	3 cut(s)	227, 588, 1374
MvnI	CGCG	1 cut(s)	1752
MwoI	GCNNNNNNNGC	5 cut(s)	390, 737, 862, 1085, 2036
NarI	GGCGCC	1 cut(s)	1411
NciI	CCSGG	1 cut(s)	1913
NcoI	CCATGG	1 cut(s)	22
NdeII	GATC	6 cut(s)	46, 310, 656, 751, 875, 1097
NlaIII	CATG	9 cut(s)	26, 83, 247, 446, 818, 891, 1182, 1642, 1646
NlaIV	GGNNCC	4 cut(s)	68, 312, 572, 1412
NmuCI	GTSAC	2 cut(s)	170, 1681
NruI	TCGCGA	1 cut(s)	1752
NsiI	ATGCAT	1 cut(s)	1644
NspI	RCATGY	3 cut(s)	247, 891, 1182
NspV	TTCGAA	1 cut(s)	1776
PaeI	GCATGC	1 cut(s)	1182
PagI	TCATGA	2 cut(s)	79, 814
PaqCI	CACCTGC	1 cut(s)	1681
PceI	AGGCCT	2 cut(s)	1071, 1846
PciI	ACATGT	1 cut(s)	887
PciSI	GCTCTTC	1 cut(s)	1709
PctI	GAATGC	1 cut(s)	1015
PfeI	GAWTC	7 cut(s)	131, 494, 673, 746, 790, 797, 821
PflFI	GACNNNGTC	2 cut(s)	1598, 1939
PinAI	ACCGGT	1 cut(s)	1545
PkrI	GCNGC	8 cut(s)	274, 403, 416, 733, 855, 1415, 1899, 2001
PleI	GAGTC	2 cut(s)	472, 811
PluTI	GGCGCC	1 cut(s)	1414
PpsI	GAGTC	2 cut(s)	472, 811
PpuMI	RGGWCCY	1 cut(s)	590
PscI	ACATGT	1 cut(s)	887
PshBI	ATTAAT	1 cut(s)	1623
Psp124BI	GAGCTC	1 cut(s)	1920
Psp5II	RGGWCCY	1 cut(s)	590
Psp6I	CCWGG	3 cut(s)	225, 586, 1372
PspFI	CCCAGC	1 cut(s)	1886
PspGI	CCWGG	3 cut(s)	225, 586, 1372
PspN4I	GGNNCC	4 cut(s)	68, 312, 572, 1412
PspPI	GGNCC	4 cut(s)	262, 590, 1293, 1331
PspPPI	RGGWCCY	1 cut(s)	590
PstI	CTGCAG	1 cut(s)	2004
PsuI	RGATCY	3 cut(s)	310, 875, 1097
PsyI	GACNNNGTC	2 cut(s)	1598, 1939
PvuII	CAGCTG	1 cut(s)	731
RruI	TCGCGA	1 cut(s)	1752
RsaI	GTAC	4 cut(s)	197, 572, 580, 605
RsaNI	GTAC	4 cut(s)	196, 571, 579, 604
SacI	GAGCTC	1 cut(s)	1920
SapI	GCTCTTC	1 cut(s)	1709
SaqAI	TTAA	9 cut(s)	12, 300, 827, 1151, 1533, 1604, 1614, 1623, 1923
SatI	GCNGC	8 cut(s)	273, 402, 415, 732, 854, 1414, 1898, 2000
Sau3AI	GATC	6 cut(s)	46, 310, 656, 751, 875, 1097
Sau96I	GGNCC	4 cut(s)	262, 590, 1293, 1331
SchI	GAGTC	2 cut(s)	473, 812
ScrFI	CCNGG	4 cut(s)	227, 588, 1374, 1913
SduI	GDGCHC	4 cut(s)	69, 192, 955, 1920
SexAI	ACCWGGT	1 cut(s)	1372
SfaNI	GCATC	4 cut(s)	283, 626, 1142, 1986
SfcI	CTRYAG	1 cut(s)	2000
SfoI	GGCGCC	1 cut(s)	1412
SfuI	TTCGAA	1 cut(s)	1776
SinI	GGWCC	2 cut(s)	590, 1331
SmlI	CTYRAG	3 cut(s)	191, 563, 998
SmoI	CTYRAG	3 cut(s)	191, 563, 998
SphI	GCATGC	1 cut(s)	1182
SseBI	AGGCCT	2 cut(s)	1071, 1846
SsiI	CCGC	1 cut(s)	1414
SspDI	GGCGCC	1 cut(s)	1410
SspI	AATATT	2 cut(s)	1427, 1788
SspMI	CTAG	5 cut(s)	126, 215, 843, 1073, 1872
SstI	GAGCTC	1 cut(s)	1920
StuI	AGGCCT	2 cut(s)	1071, 1846
StyD4I	CCNGG	4 cut(s)	225, 586, 1372, 1911
StyI	CCWWGG	1 cut(s)	22
TaaI	ACNGT	9 cut(s)	122, 160, 167, 603, 1538, 1573, 1689, 1698, 1744
TaqI	TCGA	4 cut(s)	1381, 1725, 1776, 1943
TatI	WGTACW	3 cut(s)	195, 578, 603
TauI	GCSGC	1 cut(s)	1416
TfiI	GAWTC	7 cut(s)	131, 494, 673, 746, 790, 797, 821
Tru1I	TTAA	9 cut(s)	12, 300, 827, 1151, 1533, 1604, 1614, 1623, 1923
Tru9I	TTAA	9 cut(s)	12, 300, 827, 1151, 1533, 1604, 1614, 1623, 1923
TscAI	CASTG	4 cut(s)	581, 606, 1747, 1868
TseFI	GTSAC	2 cut(s)	170, 1681
TseI	GCWGC	7 cut(s)	272, 401, 414, 731, 853, 1897, 1999
Tsp45I	GTSAC	2 cut(s)	170, 1681
TspGWI	ACGGA	1 cut(s)	610
TspRI	CASTG	4 cut(s)	581, 606, 1747, 1868
Tth111I	GACNNNGTC	2 cut(s)	1598, 1939
VneI	GTGCAC	1 cut(s)	951
VpaK11BI	GGWCC	2 cut(s)	590, 1331
VspI	ATTAAT	1 cut(s)	1623
XapI	RAATTY	5 cut(s)	31, 523, 610, 1557, 1606
XbaI	TCTAGA	1 cut(s)	214
XceI	RCATGY	3 cut(s)	247, 891, 1182
XmiI	GTMKAC	1 cut(s)	924
XspI	CTAG	5 cut(s)	126, 215, 843, 1073, 1872
Zsp2I	ATGCAT	1 cut(s)	1644

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.