Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000175

Physical Location & Seq

Genomic Coordinates Reverse (-)

8118511 .. 8120535

Gene Structure 2025 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1097900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGGATACCTTTCTGGATGAATTTCCAAGTCCCATGAACAACTTCGTGTTCGAGCAAGCCCCCGTTCCGGCCTACTCGAATCCCAATCTTGTTCATGAGTTTGAAGCCAACCATGATTTCACTGATCCTAGTTTCTTCCTTGTCAATCCCGACCCTGTTAGTGATTTATCTTCGTCGCCGGGCGTGAGCTCGGAGGTGGATTCTCCGGACAGCGGTGACACATCCAATGAAATTCTCAGGTACATAAGTCAGATGCTTATGGAGGAAGAGGAATACTTGGAGAACAAGCCTTGCATGCTGCACGAATGTTTGGCCCTCCAAGCTGCTGAAAAATCACTGCATGATGTGCTTGTTCAGGAGCAGAATCCCTTCTCAACTGATCCACTTCTTGATTCCGTGTATCGATATGTTGAGAGCCCGAACCCAGGCAGTAATCACAGCAGTTCTGGCTCTGTTGCTTCTGCAAACTGGGTTGGATCGGATTGGGATTGTGTTCAAGATGTTTCCAAGTTCTCTCCTGCCCAAATTCCAAACCCTTTGGTTTCGAGCGGCGAGGGTGAAATCGCGCATCTGGAACACAACTCATCGCTTGTTATGGCGCCGAGGGAGCTGCAGGTTAAGGATGTGAGTAACTCTCCGAATGGATCAAGGAACAAGAAGAATCGCCAGAGGGAAGACGGGGATTCTGTAGATGACGGGAGGAGCAACAAGCTTTCAGCGGTTTATGCTGACGAAGTTGAACTACCGGAGCTGCTTGATAAGGTACTGCTCTGTGAGAATGACAAACAAGAGTCCAACTCATGTTCTCCCCAGGAAAGCAAGAAGTTGCAGCTCAACGGGAAGTCGAGAGGATCGAAGGGCAAGAAAACACGCAAGAAAAAGCCAGACGACAATGCAGGGATGGTTGATTTATGGTCGATGCTGACTCAATGTGCACAAGCTGTTGCAAGCTATGACAGAAGGAATGCAGATGAACTACTCAAGCAGATAAGGCTCAACTCTTCTCCCTCCGGCGATGGCACACAGAGATTAGCTCATTACTTGGCAGATGGCCTCGAACTGCGCTTGGGTTCTGGCGTTCCCTCGTACACTTCCCTTCCCAACAGTATGTCAGCTGCTGATCTCTTAAAAGCTTACCAGACTTACATCAAGGCTTGCCCCTTCCACAAGATGTCGAATTTATATGCTAACAAAACGATTCTGAAACTAGCGGAGAAAGCGACAAGGCTTCACATCATTGATTTCGGTGTCCTCTATGGCTTCCAATGGCCTTGCCTCATCAAAGGCCTCTCCAAGAGACCTGGCGGACCTCCCATGCTTCGTATTACTGGAGTTGAGTTTCCCCAACCAGGTTTTCGGCCTTCGGAAAGGGTTGAACAGACGGGGCGCCGCCTAGAGAATTACTGCAGGAGGTTCAATGTCCAGTTCGAGTACACTGCCATAGCAAATAATTGGGAAACAATTCGGTATGAGGATATCAAAACCGACAGAGATGAGTTAACCGTAGTCAACTGCTTGTACCGGCTAAAGAACCTACCCGATGAAACAGTGACAGACTGTCCGAGGGATACAGTTCTGAAGCTGATCCGGGAAATTAACCCGGATCTATTCATCCACGGGGTAGTCAATGGAACCTACAATGCACCCTTCTTCGACACACGCTTCCGGGAGACGCTCTTCCATTTCTCTTCCCTGTTCGACATGTTCGAGGAGACACTGCCGCGAGAAGATCAACATAGGCTGCTATATGAAAGAGAAGTATATGGTAGAGATGCTATCAATGTGATAGCATGTGAGGGTTCAAGGAGGGTCGAAAGGCCGGAGACGTACAAGCAGTGGCAGATTAGAAACAAGAGAGCTGGGTTCAGGCAGTTACCGTCGGACCAGGAGATCTTGAAGTTAGTCAGGAGTATGGTGAAGAGAGATTACCATAAGGATTTCATCGTCGACGAAGATGGCATGTGGGTGTTGCAGGGATGGAAGGGCAGGATAGTCCATGCTATTTCGTACTGGAAACCTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

675

Amino Acids

76.65

Weight (kDa)

5.45

Isoelectric Point (pI)

49.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	306 - 672	5.5e-113	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000175)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca	FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica	MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica	Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis	pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis	RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata	RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora	Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa	Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha	Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana	Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	604
AccB1I	GGYRCC	2 cut(s)	598, 1386
AccBSI	CCGCTC	1 cut(s)	549
AccI	GTMKAC	1 cut(s)	1947
AccII	CGCG	2 cut(s)	566, 1723
AccIII	TCCGGA	1 cut(s)	205
AciI	CCGC	7 cut(s)	213, 549, 719, 1211, 1305, 1390, 1721
AclWI	GGATC	7 cut(s)	119, 374, 484, 652, 859, 1579, 1611
AcsI	RAATTY	4 cut(s)	20, 231, 525, 1177
AcuI	CTGAAG	1 cut(s)	1598
AcyI	GRCGYC	2 cut(s)	599, 1387
AfaI	GTAC	7 cut(s)	242, 765, 1088, 1433, 1520, 1829, 2009
AfiI	CCNNNNNNNGG	4 cut(s)	67, 212, 425, 1349
AflIII	ACRYGT	1 cut(s)	1701
AgsI	TTSAA	7 cut(s)	104, 497, 740, 1376, 1417, 1803, 1897
AhdI	GACNNNNNGTC	1 cut(s)	1557
AjnI	CCWGG	5 cut(s)	424, 810, 1300, 1348, 1884
AjuI	GAANNNNNNNTTGG	4 cut(s)	101, 133, 1338, 1370
Alw21I	GWGCWC	2 cut(s)	191, 937
Alw26I	GTCTC	4 cut(s)	1291, 1664, 1706, 1817
Alw44I	GTGCAC	1 cut(s)	933
AlwI	GGATC	7 cut(s)	119, 374, 484, 652, 859, 1579, 1611
AlwNI	CAGNNNCTG	1 cut(s)	1118
Aor13HI	TCCGGA	1 cut(s)	205
AoxI	GGCC	7 cut(s)	69, 312, 1051, 1268, 1285, 1358, 1817
ApaLI	GTGCAC	1 cut(s)	933
ApeKI	GCWGC	7 cut(s)	298, 323, 610, 751, 829, 1115, 1741
ApoI	RAATTY	4 cut(s)	20, 231, 525, 1177
Asp700I	GAANNNNTTC	3 cut(s)	41, 368, 1461
AspLEI	GCGC	4 cut(s)	568, 601, 1065, 1389
AspS9I	GGNCC	3 cut(s)	313, 1307, 1882
AsuC2I	CCSGG	4 cut(s)	180, 1589, 1601, 1667
AsuHPI	GGTGA	3 cut(s)	227, 569, 1927
AvaII	GGWCC	2 cut(s)	1307, 1882
BaeGI	GKGCMC	1 cut(s)	937
BaeI	ACNNNNGTAYC	2 cut(s)	232, 265
BanI	GGYRCC	2 cut(s)	598, 1386
BanII	GRGCYC	2 cut(s)	191, 419
BarI	GAAGNNNNNNTAC	4 cut(s)	726, 758, 1910, 1942
BbsI	GAAGAC	1 cut(s)	681
Bbv12I	GWGCWC	2 cut(s)	191, 937
BbvI	GCAGC	7 cut(s)	285, 310, 597, 738, 841, 1102, 1728
BccI	CCATC	5 cut(s)	895, 1010, 1043, 1949, 1971
BcgI	CGANNNNNNTGC	4 cut(s)	592, 626, 1418, 1452
BciT130I	CCWGG	5 cut(s)	426, 812, 1302, 1350, 1886
BciVI	GTATCC	1 cut(s)	1561
BcnI	CCSGG	4 cut(s)	180, 1589, 1601, 1667
BcoDI	GTCTC	4 cut(s)	1291, 1664, 1706, 1817
BfaI	CTAG	3 cut(s)	129, 1208, 1394
BfmI	CTRYAG	3 cut(s)	611, 687, 1405
BfoI	RGCGCY	2 cut(s)	602, 1390
BfuAI	ACCTGC	1 cut(s)	604
BfuI	GTATCC	1 cut(s)	1561
BglII	AGATCT	1 cut(s)	1890
Bme1390I	CCNGG	9 cut(s)	180, 426, 812, 1302, 1350, 1589, 1601, 1667, 1886
Bme18I	GGWCC	2 cut(s)	1307, 1882
BmeRI	GACNNNNNGTC	1 cut(s)	1557
BmgT120I	GGNCC	3 cut(s)	313, 1307, 1882
BmiI	GGNNCC	3 cut(s)	600, 1388, 1633
BmrFI	CCNGG	9 cut(s)	180, 426, 812, 1302, 1350, 1589, 1601, 1667, 1886
BmrI	ACTGGG	1 cut(s)	478
BmsI	GCATC	4 cut(s)	243, 577, 909, 1762
BmuI	ACTGGG	1 cut(s)	478
BpiI	GAAGAC	1 cut(s)	681
BplI	GAGNNNNNCTC	6 cut(s)	619, 651, 782, 814, 1018, 1050
BpmI	CTGGAG	1 cut(s)	1350
BpuEI	CTTGAG	1 cut(s)	965
BpuMI	CCSGG	4 cut(s)	180, 1589, 1601, 1667
Bsa29I	ATCGAT	1 cut(s)	403
BsaHI	GRCGYC	2 cut(s)	599, 1387
BsaI	GGTCTC	1 cut(s)	1291
BsaJI	CCNNGG	5 cut(s)	424, 602, 810, 1562, 1615
BsaWI	WCCGGW	2 cut(s)	205, 745
Bsc4I	CCNNNNNNNGG	4 cut(s)	67, 212, 425, 1349
Bse118I	RCCGGY	1 cut(s)	1521
Bse1I	ACTGG	4 cut(s)	473, 1333, 1423, 2015
BseAI	TCCGGA	1 cut(s)	205
BseBI	CCWGG	5 cut(s)	426, 812, 1302, 1350, 1886
BseCI	ATCGAT	1 cut(s)	403
BseDI	CCNNGG	5 cut(s)	424, 602, 810, 1562, 1615
BseGI	GGATG	6 cut(s)	22, 221, 628, 906, 1611, 1982
BseLI	CCNNNNNNNGG	4 cut(s)	67, 212, 425, 1349
BseMII	CTCAG	1 cut(s)	250
BseNI	ACTGG	4 cut(s)	473, 1333, 1423, 2015
BseRI	GAGGAG	2 cut(s)	715, 1724
BseSI	GKGCMC	1 cut(s)	937
BseXI	GCAGC	7 cut(s)	285, 310, 597, 738, 841, 1102, 1728
BseYI	CCCAGC	1 cut(s)	1859
BsgI	GTGCAG	1 cut(s)	284
Bsh1236I	CGCG	2 cut(s)	566, 1723
BshFI	GGCC	7 cut(s)	71, 314, 1053, 1270, 1287, 1360, 1819
BshNI	GGYRCC	2 cut(s)	598, 1386
BshVI	ATCGAT	1 cut(s)	403
BsiHKAI	GWGCWC	2 cut(s)	191, 937
BslFI	GGGAC	1 cut(s)	15
BslI	CCNNNNNNNGG	4 cut(s)	67, 212, 425, 1349
BsmAI	GTCTC	4 cut(s)	1291, 1664, 1706, 1817
BsmBI	CGTCTC	2 cut(s)	1664, 1817
BsmFI	GGGAC	1 cut(s)	15
BsmI	GAATGC	1 cut(s)	970
BsnI	GGCC	7 cut(s)	71, 314, 1053, 1270, 1287, 1360, 1819
Bso31I	GGTCTC	1 cut(s)	1291
Bsp1286I	GDGCHC	3 cut(s)	191, 419, 937
Bsp13I	TCCGGA	1 cut(s)	205
BspACI	CCGC	7 cut(s)	213, 549, 719, 1211, 1305, 1390, 1721
BspANI	GGCC	7 cut(s)	71, 314, 1053, 1270, 1287, 1360, 1819
BspCNI	CTCAG	1 cut(s)	249
BspDI	ATCGAT	1 cut(s)	403
BspEI	TCCGGA	1 cut(s)	205
BspFNI	CGCG	2 cut(s)	566, 1723
BspHI	TCATGA	1 cut(s)	94
BspLI	GGNNCC	3 cut(s)	600, 1388, 1633
BspMAI	CTGCAG	2 cut(s)	615, 1409
BspMI	ACCTGC	1 cut(s)	604
BspPI	GGATC	7 cut(s)	119, 374, 484, 652, 859, 1579, 1611
BspQI	GCTCTTC	1 cut(s)	1682
BspT107I	GGYRCC	2 cut(s)	598, 1386
BspTNI	GGTCTC	1 cut(s)	1291
BsrBI	CCGCTC	1 cut(s)	549
BsrFI	RCCGGY	1 cut(s)	1521
BsrI	ACTGG	4 cut(s)	473, 1333, 1423, 2015
BssAI	RCCGGY	1 cut(s)	1521
BssECI	CCNNGG	5 cut(s)	424, 602, 810, 1562, 1615
BssNI	GRCGYC	2 cut(s)	599, 1387
Bst2UI	CCWGG	5 cut(s)	426, 812, 1302, 1350, 1886
Bst4CI	ACNGT	6 cut(s)	1106, 1504, 1549, 1559, 1573, 1878
Bst6I	CTCTTC	5 cut(s)	261, 1006, 1682, 1693, 1913
BstACI	GRCGYC	2 cut(s)	599, 1387
BstAPI	GCANNNNNTGC	1 cut(s)	346
BstC8I	GCNNGC	4 cut(s)	57, 296, 949, 1156
BstDEI	CTNAG	1 cut(s)	236
BstDSI	CCRYGG	1 cut(s)	1615
BstF5I	GGATG	6 cut(s)	22, 221, 628, 906, 1611, 1982
BstFNI	CGCG	2 cut(s)	566, 1723
BstH2I	RGCGCY	2 cut(s)	602, 1390
BstHHI	GCGC	4 cut(s)	568, 601, 1065, 1389
BstMAI	GTCTC	4 cut(s)	1291, 1664, 1706, 1817
BstMWI	GCNNNNNNNGC	8 cut(s)	295, 320, 346, 447, 607, 725, 991, 1217
BstNI	CCWGG	5 cut(s)	426, 812, 1302, 1350, 1886
BstNSI	RCATGY	4 cut(s)	298, 1705, 1794, 1963
BstSCI	CCNGG	9 cut(s)	178, 424, 810, 1300, 1348, 1587, 1599, 1665, 1884
BstSFI	CTRYAG	3 cut(s)	611, 687, 1405
BstSLI	GKGCMC	1 cut(s)	937
BstUI	CGCG	2 cut(s)	566, 1723
BstV1I	GCAGC	7 cut(s)	285, 310, 597, 738, 841, 1102, 1728
BstV2I	GAAGAC	1 cut(s)	681
BstX2I	RGATCY	2 cut(s)	1603, 1890
BstYI	RGATCY	2 cut(s)	1603, 1890
Bsu15I	ATCGAT	1 cut(s)	403
BsuI	GTATCC	1 cut(s)	1561
BsuRI	GGCC	7 cut(s)	71, 314, 1053, 1270, 1287, 1360, 1819
BsuTUI	ATCGAT	1 cut(s)	403
BtgI	CCRYGG	1 cut(s)	1615
BtgZI	GCGATG	2 cut(s)	570, 1029
BtsCI	GGATG	6 cut(s)	22, 221, 628, 906, 1611, 1982
BtsI	GCAGTG	4 cut(s)	335, 1434, 1715, 1841
BtsIMutI	CAGTG	6 cut(s)	120, 335, 1434, 1554, 1715, 1841
BveI	ACCTGC	1 cut(s)	604
Cac8I	GCNNGC	4 cut(s)	57, 296, 949, 1156
CaiI	CAGNNNCTG	1 cut(s)	1118
CciI	TCATGA	1 cut(s)	94
CfoI	GCGC	4 cut(s)	568, 601, 1065, 1389
Cfr10I	RCCGGY	1 cut(s)	1521
Cfr13I	GGNCC	3 cut(s)	313, 1307, 1882
ClaI	ATCGAT	1 cut(s)	403
CseI	GACGC	1 cut(s)	1681
CsiI	ACCWGGT	1 cut(s)	1348
Csp6I	GTAC	7 cut(s)	241, 764, 1087, 1432, 1519, 1828, 2008
CviQI	GTAC	7 cut(s)	241, 764, 1087, 1432, 1519, 1828, 2008
DdeI	CTNAG	1 cut(s)	236
DinI	GGCGCC	2 cut(s)	600, 1388
DriI	GACNNNNNGTC	1 cut(s)	1557
Eam1104I	CTCTTC	5 cut(s)	261, 1006, 1682, 1693, 1913
Eam1105I	GACNNNNNGTC	1 cut(s)	1557
EarI	CTCTTC	5 cut(s)	261, 1006, 1682, 1693, 1913
EciI	GGCGGA	1 cut(s)	1320
Ecl136II	GAGCTC	1 cut(s)	189
Eco147I	AGGCCT	1 cut(s)	1287
Eco24I	GRGCYC	2 cut(s)	191, 419
Eco31I	GGTCTC	1 cut(s)	1291
Eco32I	GATATC	1 cut(s)	1477
Eco47I	GGWCC	2 cut(s)	1307, 1882
Eco53kI	GAGCTC	1 cut(s)	189
Eco57I	CTGAAG	1 cut(s)	1598
EcoICRI	GAGCTC	1 cut(s)	189
EcoRII	CCWGG	5 cut(s)	424, 810, 1300, 1348, 1884
EcoRV	GATATC	1 cut(s)	1477
EcoT38I	GRGCYC	2 cut(s)	191, 419
EgeI	GGCGCC	2 cut(s)	600, 1388
EheI	GGCGCC	2 cut(s)	600, 1388
Esp3I	CGTCTC	2 cut(s)	1664, 1817
FaqI	GGGAC	1 cut(s)	15
FblI	GTMKAC	1 cut(s)	1947
FokI	GGATG	6 cut(s)	29, 208, 635, 913, 1598, 1989
FriOI	GRGCYC	2 cut(s)	191, 419
FspBI	CTAG	3 cut(s)	129, 1208, 1394
GlaI	GCGC	4 cut(s)	567, 600, 1064, 1388
GsaI	CCCAGC	1 cut(s)	1863
GsuI	CTGGAG	1 cut(s)	1350
HaeII	RGCGCY	2 cut(s)	602, 1390
HaeIII	GGCC	7 cut(s)	71, 314, 1053, 1270, 1287, 1360, 1819
HgaI	GACGC	1 cut(s)	1681
HhaI	GCGC	4 cut(s)	568, 601, 1065, 1389
Hin1I	GRCGYC	2 cut(s)	599, 1387
Hin6I	GCGC	4 cut(s)	566, 599, 1063, 1387
HinP1I	GCGC	4 cut(s)	566, 599, 1063, 1387
HincII	GTYRAC	3 cut(s)	1500, 1510, 1948
HindII	GTYRAC	3 cut(s)	1500, 1510, 1948
HindIII	AAGCTT	2 cut(s)	710, 1131
HinfI	GANTC	9 cut(s)	79, 200, 364, 392, 661, 683, 791, 925, 1198
HpaI	GTTAAC	1 cut(s)	1500
HphI	GGTGA	3 cut(s)	227, 569, 1927
Hpy166II	GTNNAC	6 cut(s)	935, 1089, 1434, 1500, 1510, 1948
Hpy188I	TCNGA	9 cut(s)	193, 252, 481, 639, 1203, 1366, 1563, 1578, 1882
Hpy8I	GTNNAC	6 cut(s)	935, 1089, 1434, 1500, 1510, 1948
Hpy99I	CGWCG	4 cut(s)	178, 1882, 1949, 1952
HpyAV	CCTTC	8 cut(s)	379, 850, 954, 1106, 1171, 1371, 1657, 1975
HpyCH4III	ACNGT	6 cut(s)	1106, 1504, 1549, 1559, 1573, 1878
HpyCH4IV	ACGT	1 cut(s)	1826
HpyF10VI	GCNNNNNNNGC	8 cut(s)	295, 320, 346, 447, 607, 725, 991, 1217
HpyF3I	CTNAG	1 cut(s)	236
HpySE526I	ACGT	1 cut(s)	1826
Hsp92I	GRCGYC	2 cut(s)	599, 1387
HspAI	GCGC	4 cut(s)	566, 599, 1063, 1387
KasI	GGCGCC	2 cut(s)	598, 1386
Kpn2I	TCCGGA	1 cut(s)	205
KspAI	GTTAAC	1 cut(s)	1500
LguI	GCTCTTC	1 cut(s)	1682
LmnI	GCTCC	4 cut(s)	358, 607, 702, 748
Lsp1109I	GCAGC	7 cut(s)	285, 310, 597, 738, 841, 1102, 1728
LweI	GCATC	4 cut(s)	243, 577, 909, 1762
MabI	ACCWGGT	1 cut(s)	1348
MaeI	CTAG	3 cut(s)	129, 1208, 1394
MaeII	ACGT	1 cut(s)	1826
MaeIII	GTNAC	4 cut(s)	215, 629, 1549, 1872
MbiI	CCGCTC	1 cut(s)	549
MflI	RGATCY	2 cut(s)	1603, 1890
MhlI	GDGCHC	3 cut(s)	191, 419, 937
MluCI	AATT	8 cut(s)	20, 231, 525, 1177, 1399, 1450, 1461, 1593
Mly113I	GGCGCC	2 cut(s)	599, 1387
MlyI	GAGTC	2 cut(s)	800, 919
MmeI	TCCRAC	3 cut(s)	454, 819, 1860
MroI	TCCGGA	1 cut(s)	205
MroXI	GAANNNNTTC	3 cut(s)	41, 368, 1461
MseI	TTAA	4 cut(s)	618, 1127, 1499, 1596
MslI	CAYNNNNRTG	1 cut(s)	1964
MspA1I	CMGCKG	3 cut(s)	213, 719, 1115
MspR9I	CCNGG	9 cut(s)	180, 426, 812, 1302, 1350, 1589, 1601, 1667, 1886
Mva1269I	GAATGC	1 cut(s)	970
MvaI	CCWGG	5 cut(s)	426, 812, 1302, 1350, 1886
MvnI	CGCG	2 cut(s)	566, 1723
MwoI	GCNNNNNNNGC	8 cut(s)	295, 320, 346, 447, 607, 725, 991, 1217
NarI	GGCGCC	2 cut(s)	599, 1387
NciI	CCSGG	4 cut(s)	180, 1589, 1601, 1667
NlaIV	GGNNCC	3 cut(s)	600, 1388, 1633
NmeAIII	GCCGAG	1 cut(s)	627
NmuCI	GTSAC	2 cut(s)	215, 1549
NspI	RCATGY	4 cut(s)	298, 1705, 1794, 1963
PaeI	GCATGC	1 cut(s)	298
PagI	TCATGA	1 cut(s)	94
PceI	AGGCCT	1 cut(s)	1287
PciI	ACATGT	1 cut(s)	1701
PciSI	GCTCTTC	1 cut(s)	1682
PcsI	WCGNNNNNNNCGW	2 cut(s)	851, 1704
PctI	GAATGC	1 cut(s)	970
PdmI	GAANNNNTTC	3 cut(s)	41, 368, 1461
PfeI	GAWTC	7 cut(s)	79, 200, 364, 392, 661, 683, 1198
PfoI	TCCNGGA	2 cut(s)	1587, 1665
PleI	GAGTC	2 cut(s)	799, 919
PluTI	GGCGCC	2 cut(s)	602, 1390
PpsI	GAGTC	2 cut(s)	799, 919
PscI	ACATGT	1 cut(s)	1701
Psp124BI	GAGCTC	1 cut(s)	191
Psp6I	CCWGG	5 cut(s)	424, 810, 1300, 1348, 1884
PspFI	CCCAGC	1 cut(s)	1859
PspGI	CCWGG	5 cut(s)	424, 810, 1300, 1348, 1884
PspN4I	GGNNCC	3 cut(s)	600, 1388, 1633
PspPI	GGNCC	3 cut(s)	313, 1307, 1882
PstI	CTGCAG	2 cut(s)	615, 1409
PstNI	CAGNNNCTG	1 cut(s)	1118
PsuI	RGATCY	2 cut(s)	1603, 1890
PvuII	CAGCTG	1 cut(s)	1115
RsaI	GTAC	7 cut(s)	242, 765, 1088, 1433, 1520, 1829, 2009
RsaNI	GTAC	7 cut(s)	241, 764, 1087, 1432, 1519, 1828, 2008
RseI	CAYNNNNRTG	1 cut(s)	1964
SacI	GAGCTC	1 cut(s)	191
SalI	GTCGAC	1 cut(s)	1946
SapI	GCTCTTC	1 cut(s)	1682
SaqAI	TTAA	4 cut(s)	618, 1127, 1499, 1596
Sau96I	GGNCC	3 cut(s)	313, 1307, 1882
SchI	GAGTC	2 cut(s)	800, 919
ScrFI	CCNGG	9 cut(s)	180, 426, 812, 1302, 1350, 1589, 1601, 1667, 1886
SduI	GDGCHC	3 cut(s)	191, 419, 937
SexAI	ACCWGGT	1 cut(s)	1348
SfaNI	GCATC	4 cut(s)	243, 577, 909, 1762
SfcI	CTRYAG	3 cut(s)	611, 687, 1405
SfoI	GGCGCC	2 cut(s)	600, 1388
SgrDI	CGTCGACG	1 cut(s)	1946
SinI	GGWCC	2 cut(s)	1307, 1882
SmiMI	CAYNNNNRTG	1 cut(s)	1964
SmlI	CTYRAG	1 cut(s)	980
SmoI	CTYRAG	1 cut(s)	980
SphI	GCATGC	1 cut(s)	298
Sse9I	AATT	8 cut(s)	20, 231, 525, 1177, 1399, 1450, 1461, 1593
SseBI	AGGCCT	1 cut(s)	1287
SsiI	CCGC	7 cut(s)	213, 549, 719, 1211, 1305, 1390, 1721
SspDI	GGCGCC	2 cut(s)	598, 1386
SspMI	CTAG	3 cut(s)	129, 1208, 1394
SstI	GAGCTC	1 cut(s)	191
StuI	AGGCCT	1 cut(s)	1287
StyD4I	CCNGG	9 cut(s)	178, 424, 810, 1300, 1348, 1587, 1599, 1665, 1884
TaaI	ACNGT	6 cut(s)	1106, 1504, 1549, 1559, 1573, 1878
TaiI	ACGT	1 cut(s)	1829
TasI	AATT	8 cut(s)	20, 231, 525, 1177, 1399, 1450, 1461, 1593
TatI	WGTACW	1 cut(s)	1431
TauI	GCSGC	3 cut(s)	552, 1392, 1723
TfiI	GAWTC	7 cut(s)	79, 200, 364, 392, 661, 683, 1198
Tru1I	TTAA	4 cut(s)	618, 1127, 1499, 1596
Tru9I	TTAA	4 cut(s)	618, 1127, 1499, 1596
TscAI	CASTG	6 cut(s)	127, 342, 1441, 1554, 1722, 1841
TseFI	GTSAC	2 cut(s)	215, 1549
TseI	GCWGC	7 cut(s)	298, 323, 610, 751, 829, 1115, 1741
Tsp45I	GTSAC	2 cut(s)	215, 1549
TspDTI	ATGAA	9 cut(s)	33, 50, 83, 243, 987, 1557, 1600, 1764, 1930
TspGWI	ACGGA	1 cut(s)	385
TspRI	CASTG	6 cut(s)	127, 342, 1441, 1554, 1722, 1841
VneI	GTGCAC	1 cut(s)	933
VpaK11BI	GGWCC	2 cut(s)	1307, 1882
XapI	RAATTY	4 cut(s)	20, 231, 525, 1177
XceI	RCATGY	4 cut(s)	298, 1705, 1794, 1963
XmiI	GTMKAC	1 cut(s)	1947
XmnI	GAANNNNTTC	3 cut(s)	41, 368, 1461
XspI	CTAG	3 cut(s)	129, 1208, 1394

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.