Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

scaffold_35

Orthogroup ID

OG0000175

Physical Location & Seq

Genomic Coordinates Forward (+)

13496 .. 16456

Gene Structure 2961 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.I004500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGGGTTCCATCCAAGTAAATCAAGAATCCACAAGTCCAGTTTGCCTTTCAACCAATTTGGACCACCTTAGTGATTCAAATACTTCTTTGAGCTCTGGTTCAGATGGAGATGCTATTGACATTAGTGAGTACAATCATCCTGTGATTAAGTACATAAGTGATATTCTAGAAGAAGACCTTGAGGGTAAGCCCTGCATGTTGCAGGACTGTTTGGCCCTCCAAGCTGCTGAAAAATCTTTCTATGATGTCCTTAATCAGAATGACCATCCTTCACCCAAGCAACCCCCTCTTTCTGTGCACCAAAGCTTTGAGAACTCAGATGATGATTCCCCACATAGTTGTCATAGCAGTAATGGCTCTATTGCTGTGAAGACAAACTGGGTTTTTGATCGTTCAGAAGCTTCACATGTCCAATCTTCTCTTGTTCAGTCCCTATCAGATGCTGGTTTGGTTTCAGATTCACTTTCTGAGATGCAAAGTCTTGGGCATTTTGGAGGGTTAGGGGAAGCAAGCAAGTTCCTTCCAAATGTAAAACTGGAGGGGTACCGGTTAATGCTTCCGGGTCTTGATCAGTGGCCTTCAAGTACTAACATACTGATGACAACGCCAGACAATGATGGCTACAAGTCAACAAATGGATCAAAGGGAAAGAAAAATAATCAAAGGGAGGATGCTGATTATCCAGAAGAAGGCAGAAGCAACAAGCAGCCAGTTGCTTTTGCTGATGACTCGGAGCCGCAAGAAATGTTTGATGAGGTATTACTTTGTCATGGGAATCATGAGTTTGAGTCGTGTTCTCCTGATGAATCTTTGATAACTGTGGGAAGTGGGAAGTTGCAGCGCAACAAGCAAAAAGGATCTAAAACAGCGCGTTCAAAGAAACAGAATAACAACTGGGAACTAGTAGATTTGAGCACACTGTTAACTCAATGTGCACAAGCTGTGGCAAGCTATGACCAAAGAACTGCAAGTGAACTACTCAAGCAGATAAGGCAGCATTCTTCCCCCTATGGTGATGCTAACCAGAGATTAGCTCATTACTTTGCGGATGGCCTAGAGGCACGCTTGGCTGGAGCCAGAACTCCATCATACTCTTTCCTTGTTAGTATGCAGATATCAGCTGCTGAAATCTTAAAAGCTTATGAGGTATTTGTTACTTCATCCCCTTTCAAGACGGTGTCACATTTCTTGGCGAACAAAACAATTCTGAAACTAGCAGAAAAAGCAACTAGGCTTCATGTTATTGATTTTGGCATTTCTTATGGTTTCCAATGGCCCTGCTTTATCCAACATCTCTCCAAGAGACCGGGTGGACCTCCTAAGCTTCGTATCACAGCAATTGAGCTTCCCCAACCAGGTTTCCGACCTACAGAAAGGGTTGAAGAGACGGGGCGTCGCCTGAAAAAATATGCTGAGAGATTTAATGTCCCATTTGAGTACAATGTCATTGCTCAGAAGTGGGAAACAATCCAATTTGAGGATCTTAAAATTGACAGAAATGAGGTGATTGTGGTCAATTGTATGAACCGACTAAAGCACATACCTGATGAGACAGTGATGGTGAACAGCCCAAGAGACATTGTCCTAAAGTTGATCAAGAAAATTAATCCAAACCTATTCATTCATGGGGTTGTCAATGGGACATACAATTCACCCTTCTTTGTCACACGGTTCAGAGAGGCACTCTTCCACTTCTCTGCACTGTTTGATGTGTTTGAGGCCAGTGTTCCTCGTGAAGATGAACGGCGGCTGATGTTCGAAAAATATGTATATGGCAGGGACATATTGAATGTCGTAGCGTGTGAGGGACTGGAAAGAGTTGAAAGGCCTGAGACATACAAGCAGTGGCAGGTTAGGAATGTGAGGGCTGGGTTCAAGCAACTCCCAGTAGACCAAGAGCTTTTGAAGAAAATGAAGAGAATTTTGAAGTTTATGGGTTATCATAATGATTTTAGGATTGATGAAGATGGCCATTGGATTCTGCAGGGATGGAAAGGAAGAACCATTTTAGCTCTTTCCTTCTGGAAAAAAGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

679

Amino Acids

76.74

Weight (kDa)

6.16

Isoelectric Point (pI)

46.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000175)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46600 AT3G46600 AT3G46600 AT5G59450
fragaria_vesca	FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36690 FvH4_3g36691 FvH4_3g36700 FvH4_3g36711 FvH4_3g36711 FvH4_3g36720 FvH4_3g36730 FvH4_3g36760
malus_domestica	MD03G1088900.v1.1 MD03G1089100.v1.1 MD03G1089200.v1.1 MD03G1089300.v1.1 MD11G1097900.v1.1 MD11G1098000.v1.1 MD11G1098100.v1.1 MD11G1098400.v1.1 MD11G1098900.v1.1
prunus_persica	Prupe.6G073300_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073400_v2.0.a1 Prupe.6G073500_v2.0.a1 Prupe.6G073600_v2.0.a1 Prupe.6G073700_v2.0.a1 Prupe.6G073800_v2.0.a1 Prupe.I004400_v2.0.a1 Prupe.I004500_v2.0.a1
pyrus_communis	pycom03g07050 pycom03g07060 pycom03g07070 pycom03g07110 pycom04g11870 pycom11g08270 pycom11g08280
rosa_chinensis	RchiOBHm_Chr5g0065591 RchiOBHm_Chr5g0065601 RchiOBHm_Chr5g0065621 RchiOBHm_Chr5g0065631 RchiOBHm_Chr5g0065641 RchiOBHm_Chr5g0065651 RchiOBHm_Chr5g0065671 RchiOBHm_Chr5g0065721 RchiOBHm_Chr5g0065731 RchiOBHm_Chr5g0065751 RchiOBHm_Chr5g0065791 RchiOBHm_Chr5g0065811
rosa_laevigata	RLG00000035800 RLG00000035801 RLG00000035803 RLG00000035804 RLG00000035805 RLG00000035806 RLG00000035807 RLG00000035808 RLG00000035809 RLG00000035810 RLG00000035813 RLG00000035814 RLG00000035816
rosa_multiflora	Rmu_co8233911.1_g000001 Rmu_co8258053.1_g000001 Rmu_co8279117.1_g000001 Rmu_sc0000235.1_g000004 Rmu_sc0000235.1_g000024 Rmu_sc0000235.1_g000060 Rmu_sc0000235.1_g000074 Rmu_sc0001010.1_g000001 Rmu_sc0001010.1_g000015 Rmu_sc0001010.1_g000030 Rmu_sc0001010.1_g000037 Rmu_sc0001010.1_g000043 Rmu_sc0001010.1_g000063 Rmu_sc0001010.1_g000066 Rmu_sc0003636.1_g000008 Rmu_sc0003636.1_g000011 Rmu_sc0003636.1_g000012 Rmu_sc0003636.1_g000015 Rmu_sc0005971.1_g000017 Rmu_sc0008231.1_g000001 Rmu_sc0032155.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015360 Rroxscaffold_1G00015390 Rroxscaffold_1G00015410 Rroxscaffold_1G00015430 Rroxscaffold_1G00015490 Rroxscaffold_1G00015520 Rroxscaffold_1G00015530 Rroxscaffold_1G00015550 Rroxscaffold_1G00015560 Rroxscaffold_1G00015580 Rroxscaffold_1G00015600 Rroxscaffold_1G00015610 Rroxscaffold_1G00015620 Rroxscaffold_1G00015630
rosa_rugosa	Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0372800 Rorug05G0373100 Rorug05G0373100 Rorug05G0373200 Rorug05G0373300 Rorug05G0373400 Rorug05G0373500 Rorug05G0373600 Rorug05G0373700 Rorug05G0378700
rosa_samantha	Rh5AG430900 Rh5AG431000 Rh5AG431100 Rh5AG431200 Rh5AG431700 Rh5AG431800 Rh5AG431900 Rh5AG432200 Rh5AG432500 Rh5BG445200 Rh5BG446000 Rh5BG447100 Rh5BG447200 Rh5BG447400 Rh5BG447800 Rh5BG447900 Rh5BG448000 Rh5BG448100 Rh5BG448300 Rh5BG448400 Rh5BG448500 Rh5BG448600 Rh5CG467400 Rh5CG468000 Rh5CG469000 Rh5CG469100 Rh5CG469400 Rh5CG469700 Rh5CG469900 Rh5CG470100 Rh5CG470200 Rh5CG470600 Rh5CG470700 Rh5CG470800 Rh5DG459500 Rh5DG459700 Rh5DG459800 Rh5DG460000 Rh5DG460900 Rh5DG461300 Rh5DG461500 Rh5DG461900 Rh5DG462000 Rh5DG462100
rosa_wichuraiana	Rw5G040420 Rw5G040430 Rw5G040440 Rw5G040470 Rw5G040480 Rw5G040500 Rw5G040510 Rw5G040530 Rw5G040550 Rw5G040560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1840
Acc65I	GGTACC	1 cut(s)	543
AccB1I	GGYRCC	1 cut(s)	543
AccI	GTMKAC	1 cut(s)	1890
AccII	CGCG	1 cut(s)	871
AciI	CCGC	3 cut(s)	737, 1046, 1747
AclWI	GGATC	3 cut(s)	646, 865, 1488
AcoI	YGGCCR	1 cut(s)	1969
AcsI	RAATTY	1 cut(s)	1920
AcyI	GRCGYC	1 cut(s)	1393
AfaI	GTAC	5 cut(s)	131, 152, 545, 586, 1439
AfiI	CCNNNNNNNGG	3 cut(s)	689, 1355, 1477
AflIII	ACRYGT	1 cut(s)	406
AgeI	ACCGGT	1 cut(s)	546
AhdI	GACNNNNNGTC	1 cut(s)	1392
AhlI	ACTAGT	1 cut(s)	901
AjnI	CCWGG	1 cut(s)	1354
AleI	CACNNNNGTG	1 cut(s)	69
Alw21I	GWGCWC	4 cut(s)	95, 300, 917, 937
Alw26I	GTCTC	5 cut(s)	1297, 1379, 1544, 1569, 1826
Alw44I	GTGCAC	2 cut(s)	296, 933
AlwI	GGATC	3 cut(s)	646, 865, 1488
AlwNI	CAGNNNCTG	2 cut(s)	443, 1124
AoxI	GGCC	7 cut(s)	213, 575, 1051, 1274, 1719, 1826, 1969
ApaLI	GTGCAC	2 cut(s)	296, 933
ApeKI	GCWGC	5 cut(s)	224, 706, 838, 994, 1121
ApoI	RAATTY	1 cut(s)	1920
AseI	ATTAAT	1 cut(s)	1605
AsiGI	ACCGGT	1 cut(s)	546
Asp718I	GGTACC	1 cut(s)	543
AspLEI	GCGC	2 cut(s)	843, 871
AspS9I	GGNCC	4 cut(s)	61, 214, 1275, 1313
AsuC2I	CCSGG	2 cut(s)	561, 1308
AsuHPI	GGTGA	5 cut(s)	264, 1025, 1516, 1573, 1644
AsuII	TTCGAA	1 cut(s)	1758
AvaII	GGWCC	2 cut(s)	61, 1313
BaeGI	GKGCMC	2 cut(s)	300, 937
BalI	TGGCCA	1 cut(s)	1971
BanI	GGYRCC	1 cut(s)	543
BanII	GRGCYC	1 cut(s)	95
BauI	CACGAG	1 cut(s)	1731
BbsI	GAAGAC	2 cut(s)	180, 377
Bbv12I	GWGCWC	4 cut(s)	95, 300, 917, 937
BbvI	GCAGC	5 cut(s)	211, 718, 850, 1006, 1108
BccI	CCATC	9 cut(s)	17, 98, 273, 611, 1043, 1093, 1552, 1961, 1983
BceAI	ACGGC	1 cut(s)	1760
BciT130I	CCWGG	1 cut(s)	1356
BclI	TGATCA	2 cut(s)	568, 1593
BcnI	CCSGG	2 cut(s)	561, 1308
BcoDI	GTCTC	5 cut(s)	1297, 1379, 1544, 1569, 1826
BcuI	ACTAGT	1 cut(s)	901
BfaI	CTAG	6 cut(s)	167, 902, 1055, 1214, 1230, 2035
BfmI	CTRYAG	2 cut(s)	1368, 1982
BfuAI	ACCTGC	1 cut(s)	1840
BisI	GCNGC	7 cut(s)	225, 707, 737, 839, 995, 1122, 1748
BlsI	GCNGC	7 cut(s)	226, 708, 738, 840, 996, 1123, 1749
BmcAI	AGTACT	1 cut(s)	586
Bme1390I	CCNGG	3 cut(s)	561, 1308, 1356
Bme18I	GGWCC	2 cut(s)	61, 1313
BmeRI	GACNNNNNGTC	1 cut(s)	1392
BmgT120I	GGNCC	4 cut(s)	61, 214, 1275, 1313
BmiI	GGNNCC	4 cut(s)	7, 545, 735, 1075
BmrFI	CCNGG	3 cut(s)	561, 1308, 1356
BmrI	ACTGGG	3 cut(s)	388, 904, 1880
BmsI	GCATC	5 cut(s)	100, 430, 462, 661, 1006
BmuI	ACTGGG	3 cut(s)	388, 904, 1880
BpiI	GAAGAC	2 cut(s)	180, 377
BplI	GAGNNNNNCTC	4 cut(s)	1018, 1050, 1668, 1700
BpmI	CTGGAG	2 cut(s)	557, 1092
Bpu10I	CCTNAGC	1 cut(s)	1320
Bpu14I	TTCGAA	1 cut(s)	1758
BpuEI	CTTGAG	2 cut(s)	200, 965
BpuMI	CCSGG	2 cut(s)	561, 1308
BsaHI	GRCGYC	1 cut(s)	1393
BsaI	GGTCTC	1 cut(s)	1297
BsaWI	WCCGGW	1 cut(s)	546
Bsc4I	CCNNNNNNNGG	3 cut(s)	689, 1355, 1477
Bse118I	RCCGGY	1 cut(s)	546
Bse1I	ACTGG	8 cut(s)	38, 383, 540, 710, 899, 1722, 1815, 1886
Bse3DI	GCAATG	1 cut(s)	1446
BseBI	CCWGG	1 cut(s)	1356
BseGI	GGATG	7 cut(s)	9, 136, 265, 676, 1054, 1160, 1994
BseLI	CCNNNNNNNGG	3 cut(s)	689, 1355, 1477
BseMI	GCAATG	1 cut(s)	1446
BseMII	CTCAG	5 cut(s)	330, 459, 1404, 1466, 1821
BseNI	ACTGG	8 cut(s)	38, 383, 540, 710, 899, 1722, 1815, 1886
BseSI	GKGCMC	2 cut(s)	300, 937
BseXI	GCAGC	5 cut(s)	211, 718, 850, 1006, 1108
BseYI	CCCAGC	1 cut(s)	1868
BsgI	GTGCAG	1 cut(s)	1683
Bsh1236I	CGCG	1 cut(s)	871
BshFI	GGCC	7 cut(s)	215, 577, 1053, 1276, 1721, 1828, 1971
BshNI	GGYRCC	1 cut(s)	543
BshTI	ACCGGT	1 cut(s)	546
BsiHKAI	GWGCWC	4 cut(s)	95, 300, 917, 937
BsiSI	CCGG	3 cut(s)	547, 560, 1307
BslFI	GGGAC	5 cut(s)	415, 1412, 1654, 1793, 1821
BslI	CCNNNNNNNGG	3 cut(s)	689, 1355, 1477
BsmAI	GTCTC	5 cut(s)	1297, 1379, 1544, 1569, 1826
BsmBI	CGTCTC	1 cut(s)	1379
BsmFI	GGGAC	5 cut(s)	415, 1412, 1654, 1793, 1821
BsmI	GAATGC	1 cut(s)	997
BsnI	GGCC	7 cut(s)	215, 577, 1053, 1276, 1721, 1828, 1971
Bso31I	GGTCTC	1 cut(s)	1297
Bsp119I	TTCGAA	1 cut(s)	1758
Bsp1286I	GDGCHC	4 cut(s)	95, 300, 917, 937
Bsp143I	GATC	6 cut(s)	388, 568, 638, 857, 1480, 1593
BspACI	CCGC	3 cut(s)	737, 1046, 1747
BspANI	GGCC	7 cut(s)	215, 577, 1053, 1276, 1721, 1828, 1971
BspCNI	CTCAG	5 cut(s)	329, 460, 1405, 1465, 1822
BspFNI	CGCG	1 cut(s)	871
BspHI	TCATGA	1 cut(s)	778
BspLI	GGNNCC	4 cut(s)	7, 545, 735, 1075
BspMAI	CTGCAG	1 cut(s)	1986
BspMI	ACCTGC	1 cut(s)	1840
BspPI	GGATC	3 cut(s)	646, 865, 1488
BspT104I	TTCGAA	1 cut(s)	1758
BspT107I	GGYRCC	1 cut(s)	543
BspTNI	GGTCTC	1 cut(s)	1297
BsrDI	GCAATG	1 cut(s)	1446
BsrFI	RCCGGY	1 cut(s)	546
BsrI	ACTGG	8 cut(s)	38, 383, 540, 710, 899, 1722, 1815, 1886
BssAI	RCCGGY	1 cut(s)	546
BssMI	GATC	6 cut(s)	388, 568, 638, 857, 1480, 1593
BssNI	GRCGYC	1 cut(s)	1393
BssSI	CACGAG	1 cut(s)	1731
Bst2BI	CACGAG	1 cut(s)	1731
Bst2UI	CCWGG	1 cut(s)	1356
Bst4CI	ACNGT	7 cut(s)	209, 820, 921, 1177, 1555, 1671, 1704
Bst6I	CTCTTC	3 cut(s)	1377, 1691, 1910
BstACI	GRCGYC	1 cut(s)	1393
BstBI	TTCGAA	1 cut(s)	1758
BstC8I	GCNNGC	3 cut(s)	511, 949, 1063
BstDEI	CTNAG	7 cut(s)	68, 316, 468, 1320, 1413, 1452, 1830
BstF5I	GGATG	7 cut(s)	9, 136, 265, 676, 1054, 1160, 1994
BstFNI	CGCG	1 cut(s)	871
BstHHI	GCGC	2 cut(s)	843, 871
BstKTI	GATC	6 cut(s)	391, 571, 641, 860, 1483, 1596
BstMAI	GTCTC	5 cut(s)	1297, 1379, 1544, 1569, 1826
BstMBI	GATC	6 cut(s)	388, 568, 638, 857, 1480, 1593
BstMWI	GCNNNNNNNGC	6 cut(s)	221, 354, 847, 991, 1067, 1223
BstNI	CCWGG	1 cut(s)	1356
BstNSI	RCATGY	2 cut(s)	199, 410
BstSCI	CCNGG	3 cut(s)	559, 1306, 1354
BstSFI	CTRYAG	2 cut(s)	1368, 1982
BstSLI	GKGCMC	2 cut(s)	300, 937
BstUI	CGCG	1 cut(s)	871
BstV1I	GCAGC	5 cut(s)	211, 718, 850, 1006, 1108
BstV2I	GAAGAC	2 cut(s)	180, 377
BstX2I	RGATCY	2 cut(s)	857, 1480
BstYI	RGATCY	2 cut(s)	857, 1480
BsuRI	GGCC	7 cut(s)	215, 577, 1053, 1276, 1721, 1828, 1971
BtsCI	GGATG	7 cut(s)	9, 136, 265, 676, 1054, 1160, 1994
BtsI	GCAGTG	1 cut(s)	1850
BtsIMutI	CAGTG	6 cut(s)	578, 917, 1560, 1700, 1729, 1850
BveI	ACCTGC	1 cut(s)	1840
Cac8I	GCNNGC	3 cut(s)	511, 949, 1063
CaiI	CAGNNNCTG	2 cut(s)	443, 1124
CciI	TCATGA	1 cut(s)	778
CfoI	GCGC	2 cut(s)	843, 871
Cfr10I	RCCGGY	1 cut(s)	546
Cfr13I	GGNCC	4 cut(s)	61, 214, 1275, 1313
CseI	GACGC	1 cut(s)	1382
CsiI	ACCWGGT	1 cut(s)	1354
Csp6I	GTAC	5 cut(s)	130, 151, 544, 585, 1438
CspAI	ACCGGT	1 cut(s)	546
CviAII	CATG	6 cut(s)	196, 407, 770, 779, 1238, 1625
CviQI	GTAC	5 cut(s)	130, 151, 544, 585, 1438
DdeI	CTNAG	7 cut(s)	68, 316, 468, 1320, 1413, 1452, 1830
DpnI	GATC	6 cut(s)	390, 570, 640, 859, 1482, 1595
DpnII	GATC	6 cut(s)	388, 568, 638, 857, 1480, 1593
DriI	GACNNNNNGTC	1 cut(s)	1392
EaeI	YGGCCR	1 cut(s)	1969
Eam1104I	CTCTTC	3 cut(s)	1377, 1691, 1910
Eam1105I	GACNNNNNGTC	1 cut(s)	1392
EarI	CTCTTC	3 cut(s)	1377, 1691, 1910
Ecl136II	GAGCTC	1 cut(s)	93
Eco147I	AGGCCT	1 cut(s)	1828
Eco24I	GRGCYC	1 cut(s)	95
Eco31I	GGTCTC	1 cut(s)	1297
Eco32I	GATATC	1 cut(s)	1116
Eco47I	GGWCC	2 cut(s)	61, 1313
Eco53kI	GAGCTC	1 cut(s)	93
EcoICRI	GAGCTC	1 cut(s)	93
EcoRII	CCWGG	1 cut(s)	1354
EcoRV	GATATC	1 cut(s)	1116
EcoT38I	GRGCYC	1 cut(s)	95
Esp3I	CGTCTC	1 cut(s)	1379
FaeI	CATG	6 cut(s)	199, 410, 773, 782, 1241, 1628
FalI	AAGNNNNNCTT	2 cut(s)	162, 194
FaqI	GGGAC	5 cut(s)	415, 1412, 1654, 1793, 1821
FatI	CATG	6 cut(s)	195, 406, 769, 778, 1237, 1624
FbaI	TGATCA	2 cut(s)	568, 1593
FblI	GTMKAC	1 cut(s)	1890
Fnu4HI	GCNGC	7 cut(s)	225, 707, 737, 839, 995, 1122, 1748
FokI	GGATG	6 cut(s)	123, 252, 683, 1061, 1147, 2001
FriOI	GRGCYC	1 cut(s)	95
Fsp4HI	GCNGC	7 cut(s)	225, 707, 737, 839, 995, 1122, 1748
FspBI	CTAG	6 cut(s)	167, 902, 1055, 1214, 1230, 2035
GlaI	GCGC	2 cut(s)	842, 870
GluI	GCNGC	7 cut(s)	225, 707, 737, 839, 995, 1122, 1748
GsaI	CCCAGC	1 cut(s)	1872
GsuI	CTGGAG	2 cut(s)	557, 1092
HaeIII	GGCC	7 cut(s)	215, 577, 1053, 1276, 1721, 1828, 1971
HapII	CCGG	3 cut(s)	547, 560, 1307
HgaI	GACGC	1 cut(s)	1382
HhaI	GCGC	2 cut(s)	843, 871
Hin1I	GRCGYC	1 cut(s)	1393
Hin1II	CATG	6 cut(s)	199, 410, 773, 782, 1241, 1628
Hin6I	GCGC	2 cut(s)	841, 869
HinP1I	GCGC	2 cut(s)	841, 869
HincII	GTYRAC	2 cut(s)	630, 924
HindII	GTYRAC	2 cut(s)	630, 924
HindIII	AAGCTT	4 cut(s)	304, 399, 1137, 1322
HinfI	GANTC	9 cut(s)	26, 74, 326, 458, 728, 775, 788, 806, 1978
HpaI	GTTAAC	1 cut(s)	924
HpaII	CCGG	3 cut(s)	547, 560, 1307
HphI	GGTGA	5 cut(s)	264, 1025, 1516, 1573, 1644
Hpy166II	GTNNAC	8 cut(s)	298, 630, 924, 935, 974, 1313, 1564, 1891
Hpy8I	GTNNAC	8 cut(s)	298, 630, 924, 935, 974, 1313, 1564, 1891
Hpy99I	CGWCG	1 cut(s)	1398
HpyAV	CCTTC	6 cut(s)	279, 530, 588, 683, 1666, 2029
HpyCH4III	ACNGT	7 cut(s)	209, 820, 921, 1177, 1555, 1671, 1704
HpyF10VI	GCNNNNNNNGC	6 cut(s)	221, 354, 847, 991, 1067, 1223
HpyF3I	CTNAG	7 cut(s)	68, 316, 468, 1320, 1413, 1452, 1830
Hsp92I	GRCGYC	1 cut(s)	1393
Hsp92II	CATG	6 cut(s)	199, 410, 773, 782, 1241, 1628
HspAI	GCGC	2 cut(s)	841, 869
KpnI	GGTACC	1 cut(s)	547
Ksp22I	TGATCA	2 cut(s)	568, 1593
KspAI	GTTAAC	1 cut(s)	924
Kzo9I	GATC	6 cut(s)	388, 568, 638, 857, 1480, 1593
LmnI	GCTCC	2 cut(s)	733, 1073
Lsp1109I	GCAGC	5 cut(s)	211, 718, 850, 1006, 1108
LweI	GCATC	5 cut(s)	100, 430, 462, 661, 1006
MabI	ACCWGGT	1 cut(s)	1354
MaeI	CTAG	6 cut(s)	167, 902, 1055, 1214, 1230, 2035
MaeIII	GTNAC	3 cut(s)	1153, 1179, 1663
MalI	GATC	6 cut(s)	390, 570, 640, 859, 1482, 1595
MboI	GATC	6 cut(s)	388, 568, 638, 857, 1480, 1593
MfeI	CAATTG	2 cut(s)	1338, 1516
MflI	RGATCY	2 cut(s)	857, 1480
MhlI	GDGCHC	4 cut(s)	95, 300, 917, 937
MlsI	TGGCCA	1 cut(s)	1971
MluCI	AATT	9 cut(s)	55, 1203, 1338, 1472, 1488, 1516, 1602, 1648, 1920
MluNI	TGGCCA	1 cut(s)	1971
MlyI	GAGTC	2 cut(s)	722, 797
MmeI	TCCRAC	2 cut(s)	1312, 1387
Mox20I	TGGCCA	1 cut(s)	1971
MscI	TGGCCA	1 cut(s)	1971
MseI	TTAA	8 cut(s)	147, 252, 551, 923, 1133, 1422, 1485, 1605
MslI	CAYNNNNRTG	2 cut(s)	69, 596
Msp20I	TGGCCA	1 cut(s)	1971
MspA1I	CMGCKG	1 cut(s)	1121
MspI	CCGG	3 cut(s)	547, 560, 1307
MspR9I	CCNGG	3 cut(s)	561, 1308, 1356
MunI	CAATTG	2 cut(s)	1338, 1516
Mva1269I	GAATGC	1 cut(s)	997
MvaI	CCWGG	1 cut(s)	1356
MvnI	CGCG	1 cut(s)	871
MwoI	GCNNNNNNNGC	6 cut(s)	221, 354, 847, 991, 1067, 1223
NciI	CCSGG	2 cut(s)	561, 1308
NdeII	GATC	6 cut(s)	388, 568, 638, 857, 1480, 1593
NlaIII	CATG	6 cut(s)	199, 410, 773, 782, 1241, 1628
NlaIV	GGNNCC	4 cut(s)	7, 545, 735, 1075
NmuCI	GTSAC	2 cut(s)	1179, 1663
NspI	RCATGY	2 cut(s)	199, 410
NspV	TTCGAA	1 cut(s)	1758
OliI	CACNNNNGTG	1 cut(s)	69
PagI	TCATGA	1 cut(s)	778
PceI	AGGCCT	1 cut(s)	1828
PciI	ACATGT	1 cut(s)	406
PctI	GAATGC	1 cut(s)	997
PfeI	GAWTC	7 cut(s)	26, 74, 326, 458, 775, 806, 1978
PflFI	GACNNNGTC	2 cut(s)	1177, 1580
PinAI	ACCGGT	1 cut(s)	546
PkrI	GCNGC	7 cut(s)	226, 708, 738, 840, 996, 1123, 1749
PleI	GAGTC	2 cut(s)	722, 796
PpsI	GAGTC	2 cut(s)	722, 796
PscI	ACATGT	1 cut(s)	406
PshBI	ATTAAT	1 cut(s)	1605
Psp124BI	GAGCTC	1 cut(s)	95
Psp6I	CCWGG	1 cut(s)	1354
PspFI	CCCAGC	1 cut(s)	1868
PspGI	CCWGG	1 cut(s)	1354
PspN4I	GGNNCC	4 cut(s)	7, 545, 735, 1075
PspPI	GGNCC	4 cut(s)	61, 214, 1275, 1313
PstI	CTGCAG	1 cut(s)	1986
PstNI	CAGNNNCTG	2 cut(s)	443, 1124
PsuI	RGATCY	2 cut(s)	857, 1480
PsyI	GACNNNGTC	2 cut(s)	1177, 1580
PvuII	CAGCTG	1 cut(s)	1121
RsaI	GTAC	5 cut(s)	131, 152, 545, 586, 1439
RsaNI	GTAC	5 cut(s)	130, 151, 544, 585, 1438
RseI	CAYNNNNRTG	2 cut(s)	69, 596
SacI	GAGCTC	1 cut(s)	95
SaqAI	TTAA	8 cut(s)	147, 252, 551, 923, 1133, 1422, 1485, 1605
SatI	GCNGC	7 cut(s)	225, 707, 737, 839, 995, 1122, 1748
Sau3AI	GATC	6 cut(s)	388, 568, 638, 857, 1480, 1593
Sau96I	GGNCC	4 cut(s)	61, 214, 1275, 1313
ScaI	AGTACT	1 cut(s)	586
SchI	GAGTC	2 cut(s)	722, 797
ScrFI	CCNGG	3 cut(s)	561, 1308, 1356
SduI	GDGCHC	4 cut(s)	95, 300, 917, 937
SexAI	ACCWGGT	1 cut(s)	1354
SfaNI	GCATC	5 cut(s)	100, 430, 462, 661, 1006
SfcI	CTRYAG	2 cut(s)	1368, 1982
SfuI	TTCGAA	1 cut(s)	1758
SinI	GGWCC	2 cut(s)	61, 1313
SmiMI	CAYNNNNRTG	2 cut(s)	69, 596
SmlI	CTYRAG	2 cut(s)	179, 980
SmoI	CTYRAG	2 cut(s)	179, 980
SpeI	ACTAGT	1 cut(s)	901
Sse9I	AATT	9 cut(s)	55, 1203, 1338, 1472, 1488, 1516, 1602, 1648, 1920
SseBI	AGGCCT	1 cut(s)	1828
SsiI	CCGC	3 cut(s)	737, 1046, 1747
SspMI	CTAG	6 cut(s)	167, 902, 1055, 1214, 1230, 2035
SstI	GAGCTC	1 cut(s)	95
StuI	AGGCCT	1 cut(s)	1828
StyD4I	CCNGG	3 cut(s)	559, 1306, 1354
TaaI	ACNGT	7 cut(s)	209, 820, 921, 1177, 1555, 1671, 1704
TaqI	TCGA	1 cut(s)	1758
TasI	AATT	9 cut(s)	55, 1203, 1338, 1472, 1488, 1516, 1602, 1648, 1920
TatI	WGTACW	4 cut(s)	129, 150, 584, 1437
TauI	GCSGC	2 cut(s)	739, 1750
TfiI	GAWTC	7 cut(s)	26, 74, 326, 458, 775, 806, 1978
Tru1I	TTAA	8 cut(s)	147, 252, 551, 923, 1133, 1422, 1485, 1605
Tru9I	TTAA	8 cut(s)	147, 252, 551, 923, 1133, 1422, 1485, 1605
TscAI	CASTG	6 cut(s)	578, 924, 1560, 1707, 1729, 1850
TseFI	GTSAC	2 cut(s)	1179, 1663
TseI	GCWGC	5 cut(s)	224, 706, 838, 994, 1121
Tsp45I	GTSAC	2 cut(s)	1179, 1663
TspDTI	ATGAA	9 cut(s)	819, 1149, 1226, 1538, 1609, 1613, 1755, 1928, 1977
TspRI	CASTG	6 cut(s)	578, 924, 1560, 1707, 1729, 1850
Tth111I	GACNNNGTC	2 cut(s)	1177, 1580
VneI	GTGCAC	2 cut(s)	296, 933
VpaK11BI	GGWCC	2 cut(s)	61, 1313
VspI	ATTAAT	1 cut(s)	1605
XapI	RAATTY	1 cut(s)	1920
XbaI	TCTAGA	1 cut(s)	166
XceI	RCATGY	2 cut(s)	199, 410
XmiI	GTMKAC	1 cut(s)	1890
XspI	CTAG	6 cut(s)	167, 902, 1055, 1214, 1230, 2035
ZrmI	AGTACT	1 cut(s)	586

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.