DNA ligase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Myb_DNA-bind_3 | PF12776 | 17 - 114 | 4.1e-08 | Myb/SANT-like DNA-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 112 |
| AclWI | GGATC | 1 cut(s) | 679 |
| AcsI | RAATTY | 1 cut(s) | 19 |
| AfaI | GTAC | 1 cut(s) | 142 |
| AflIII | ACRYGT | 1 cut(s) | 176 |
| AgsI | TTSAA | 6 cut(s) | 79, 133, 169, 196, 226, 569 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 636, 668 |
| AluBI | AGCT | 4 cut(s) | 8, 339, 356, 395 |
| AluI | AGCT | 4 cut(s) | 8, 339, 356, 395 |
| AlwI | GGATC | 1 cut(s) | 679 |
| AoxI | GGCC | 1 cut(s) | 399 |
| ApeKI | GCWGC | 3 cut(s) | 392, 421, 486 |
| ApoI | RAATTY | 1 cut(s) | 19 |
| AspS9I | GGNCC | 1 cut(s) | 400 |
| AsuHPI | GGTGA | 2 cut(s) | 23, 607 |
| AsuNHI | GCTAGC | 1 cut(s) | 352 |
| BbvCI | CCTCAGC | 1 cut(s) | 396 |
| BbvI | GCAGC | 3 cut(s) | 404, 433, 498 |
| BfaI | CTAG | 3 cut(s) | 353, 666, 679 |
| BisI | GCNGC | 3 cut(s) | 393, 422, 487 |
| BlsI | GCNGC | 3 cut(s) | 394, 423, 488 |
| BmgT120I | GGNCC | 1 cut(s) | 400 |
| BmiI | GGNNCC | 1 cut(s) | 402 |
| BmsI | GCATC | 2 cut(s) | 258, 592 |
| BmtI | GCTAGC | 1 cut(s) | 356 |
| BoxI | GACNNNNGTC | 1 cut(s) | 465 |
| Bpu10I | CCTNAGC | 1 cut(s) | 396 |
| BpuEI | CTTGAG | 1 cut(s) | 473 |
| Bse1I | ACTGG | 1 cut(s) | 127 |
| BseGI | GGATG | 1 cut(s) | 567 |
| BseMII | CTCAG | 2 cut(s) | 387, 512 |
| BseNI | ACTGG | 1 cut(s) | 127 |
| BseXI | GCAGC | 3 cut(s) | 404, 433, 498 |
| BshFI | GGCC | 1 cut(s) | 401 |
| BslFI | GGGAC | 2 cut(s) | 347, 453 |
| BsmFI | GGGAC | 2 cut(s) | 347, 453 |
| BsmI | GAATGC | 1 cut(s) | 591 |
| BsnI | GGCC | 1 cut(s) | 401 |
| Bsp143I | GATC | 2 cut(s) | 448, 671 |
| BspANI | GGCC | 1 cut(s) | 401 |
| BspCNI | CTCAG | 2 cut(s) | 388, 511 |
| BspLI | GGNNCC | 1 cut(s) | 402 |
| BspOI | GCTAGC | 1 cut(s) | 356 |
| BspPI | GGATC | 1 cut(s) | 679 |
| BsrI | ACTGG | 1 cut(s) | 127 |
| BssMI | GATC | 2 cut(s) | 448, 671 |
| Bst4CI | ACNGT | 1 cut(s) | 377 |
| BstC8I | GCNNGC | 2 cut(s) | 162, 354 |
| BstDEI | CTNAG | 2 cut(s) | 396, 498 |
| BstF5I | GGATG | 1 cut(s) | 567 |
| BstKTI | GATC | 2 cut(s) | 451, 674 |
| BstMBI | GATC | 2 cut(s) | 448, 671 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 398 |
| BstNSI | RCATGY | 2 cut(s) | 164, 180 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 465 |
| BstV1I | GCAGC | 3 cut(s) | 404, 433, 498 |
| BstX2I | RGATCY | 1 cut(s) | 671 |
| BstYI | RGATCY | 1 cut(s) | 671 |
| BsuRI | GGCC | 1 cut(s) | 401 |
| BtsCI | GGATG | 1 cut(s) | 567 |
| Cac8I | GCNNGC | 2 cut(s) | 162, 354 |
| Cfr13I | GGNCC | 1 cut(s) | 400 |
| Csp6I | GTAC | 1 cut(s) | 141 |
| CviAII | CATG | 4 cut(s) | 161, 177, 262, 472 |
| CviJI | RGCY | 7 cut(s) | 8, 339, 352, 356, 395, 401, 489 |
| CviKI_1 | RGCY | 7 cut(s) | 8, 339, 352, 356, 395, 401, 489 |
| CviQI | GTAC | 1 cut(s) | 141 |
| DdeI | CTNAG | 2 cut(s) | 396, 498 |
| DpnI | GATC | 2 cut(s) | 450, 673 |
| DpnII | GATC | 2 cut(s) | 448, 671 |
| EcoO109I | RGGNCCY | 1 cut(s) | 400 |
| FaeI | CATG | 4 cut(s) | 164, 180, 265, 475 |
| FaqI | GGGAC | 2 cut(s) | 347, 453 |
| FatI | CATG | 4 cut(s) | 160, 176, 261, 471 |
| Fnu4HI | GCNGC | 3 cut(s) | 393, 422, 487 |
| FokI | GGATG | 1 cut(s) | 574 |
| Fsp4HI | GCNGC | 3 cut(s) | 393, 422, 487 |
| FspBI | CTAG | 3 cut(s) | 353, 666, 679 |
| GluI | GCNGC | 3 cut(s) | 393, 422, 487 |
| HaeIII | GGCC | 1 cut(s) | 401 |
| Hin1II | CATG | 4 cut(s) | 164, 180, 265, 475 |
| HincII | GTYRAC | 1 cut(s) | 147 |
| HindII | GTYRAC | 1 cut(s) | 147 |
| HinfI | GANTC | 4 cut(s) | 68, 215, 540, 572 |
| HpaI | GTTAAC | 1 cut(s) | 147 |
| HphI | GGTGA | 2 cut(s) | 23, 607 |
| Hpy166II | GTNNAC | 3 cut(s) | 107, 147, 206 |
| Hpy188I | TCNGA | 1 cut(s) | 25 |
| Hpy188III | TCNNGA | 2 cut(s) | 452, 576 |
| Hpy8I | GTNNAC | 3 cut(s) | 107, 147, 206 |
| HpyAV | CCTTC | 2 cut(s) | 190, 476 |
| HpyCH4III | ACNGT | 1 cut(s) | 377 |
| HpyCH4IV | ACGT | 3 cut(s) | 112, 143, 294 |
| HpyCH4V | TGCA | 4 cut(s) | 284, 392, 551, 589 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 398 |
| HpyF3I | CTNAG | 2 cut(s) | 396, 498 |
| HpySE526I | ACGT | 3 cut(s) | 112, 143, 294 |
| Hsp92II | CATG | 4 cut(s) | 164, 180, 265, 475 |
| KspAI | GTTAAC | 1 cut(s) | 147 |
| Kzo9I | GATC | 2 cut(s) | 448, 671 |
| LmnI | GCTCC | 2 cut(s) | 51, 418 |
| LpnPI | CCDG | 7 cut(s) | 87, 108, 123, 270, 417, 485, 561 |
| Lsp1109I | GCAGC | 3 cut(s) | 404, 433, 498 |
| LweI | GCATC | 2 cut(s) | 258, 592 |
| MaeI | CTAG | 3 cut(s) | 353, 666, 679 |
| MaeII | ACGT | 3 cut(s) | 112, 143, 294 |
| MaeIII | GTNAC | 1 cut(s) | 595 |
| MalI | GATC | 2 cut(s) | 450, 673 |
| MboI | GATC | 2 cut(s) | 448, 671 |
| MboII | GAAGA | 5 cut(s) | 77, 238, 449, 545, 581 |
| MflI | RGATCY | 1 cut(s) | 671 |
| MluCI | AATT | 3 cut(s) | 19, 184, 190 |
| MlyI | GAGTC | 1 cut(s) | 224 |
| MnlI | CCTC | 7 cut(s) | 55, 342, 391, 436, 505, 510, 621 |
| MseI | TTAA | 2 cut(s) | 146, 297 |
| MspA1I | CMGCKG | 1 cut(s) | 395 |
| Mva1269I | GAATGC | 1 cut(s) | 591 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 398 |
| NdeII | GATC | 2 cut(s) | 448, 671 |
| NheI | GCTAGC | 1 cut(s) | 352 |
| NlaIII | CATG | 4 cut(s) | 164, 180, 265, 475 |
| NlaIV | GGNNCC | 1 cut(s) | 402 |
| NmuCI | GTSAC | 1 cut(s) | 595 |
| NspI | RCATGY | 2 cut(s) | 164, 180 |
| PaeI | GCATGC | 1 cut(s) | 164 |
| PciI | ACATGT | 1 cut(s) | 176 |
| PctI | GAATGC | 1 cut(s) | 591 |
| PfeI | GAWTC | 3 cut(s) | 68, 540, 572 |
| PkrI | GCNGC | 3 cut(s) | 394, 423, 488 |
| PleI | GAGTC | 1 cut(s) | 223 |
| PpsI | GAGTC | 1 cut(s) | 223 |
| PscI | ACATGT | 1 cut(s) | 176 |
| PshAI | GACNNNNGTC | 1 cut(s) | 465 |
| Psp1406I | AACGTT | 1 cut(s) | 112 |
| PspN4I | GGNNCC | 1 cut(s) | 402 |
| PspPI | GGNCC | 1 cut(s) | 400 |
| PsuI | RGATCY | 1 cut(s) | 671 |
| PvuII | CAGCTG | 1 cut(s) | 395 |
| RsaI | GTAC | 1 cut(s) | 142 |
| RsaNI | GTAC | 1 cut(s) | 141 |
| SaqAI | TTAA | 2 cut(s) | 146, 297 |
| SatI | GCNGC | 3 cut(s) | 393, 422, 487 |
| Sau3AI | GATC | 2 cut(s) | 448, 671 |
| Sau96I | GGNCC | 1 cut(s) | 400 |
| SchI | GAGTC | 1 cut(s) | 224 |
| SfaNI | GCATC | 2 cut(s) | 258, 592 |
| SmlI | CTYRAG | 1 cut(s) | 452 |
| SmoI | CTYRAG | 1 cut(s) | 452 |
| SphI | GCATGC | 1 cut(s) | 164 |
| Sse9I | AATT | 3 cut(s) | 19, 184, 190 |
| SspMI | CTAG | 3 cut(s) | 353, 666, 679 |
| TaaI | ACNGT | 1 cut(s) | 377 |
| TaiI | ACGT | 3 cut(s) | 115, 146, 297 |
| TasI | AATT | 3 cut(s) | 19, 184, 190 |
| TfiI | GAWTC | 3 cut(s) | 68, 540, 572 |
| Tru1I | TTAA | 2 cut(s) | 146, 297 |
| Tru9I | TTAA | 2 cut(s) | 146, 297 |
| TseFI | GTSAC | 1 cut(s) | 595 |
| TseI | GCWGC | 3 cut(s) | 392, 421, 486 |
| Tsp45I | GTSAC | 1 cut(s) | 595 |
| TspDTI | ATGAA | 4 cut(s) | 30, 339, 450, 546 |
| TspGWI | ACGGA | 1 cut(s) | 399 |
| XapI | RAATTY | 1 cut(s) | 19 |
| XceI | RCATGY | 2 cut(s) | 164, 180 |
| XspI | CTAG | 3 cut(s) | 353, 666, 679 |