Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000261

Physical Location & Seq

Genomic Coordinates Reverse (-)

16974377 .. 16977630

Gene Structure 3254 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G014870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2616 bp

ATGAAAATATTGAAGAAGCAGTTCCGTATAGTTTATGAAATGGTGAACAAAACTGGGTTTGAATGGAATGATGAAAAGAAATGTGTGATGGTTGATACTGATGAGACATGGAAAGCGTATCTTCAGCATCACAAGGAGGCAGATGGGTGGAGGGGTAAATTTTTTCCGCTTTATGACAGGCTTGGTTATATATTCAAAGCGGACTGTGCACTTGGAGAAGGGTCTCGAACTTCAGCTGATATAGATCAGGAGTTGAATTGTATGGATGTTAGTACAACTGACTTTGAGATAGAGGAAGACACTTTTCCAAGGTCAGTTGACCAAGTCTCAACTAACAAGCAAACAGATCAATCTCATTCCTCACCAAGTAAGAGGAGAAGAGATGATGACTCCGGAGGTAGTAGTCAAATCAATGAAACAAATGAAAAGAATGGCAGACATTTATGGACCAAGGAGGAGGAGGATGCAGTTTTAGGCATTCTAGAGGATCTAGTTGCAAAGGGTCCTCTTTATGATGATGGTACTTTCAGATCTGGTACATTCACTCAAATAGAAGATGCCTTGCGTCATTTATGTCTAGCCTCAGGGCTGAAAGCTAGACATATTGAGTCAAAAGTTAAGAACTGGAAAAGGAAATGCAGCATAGTAAGTGACATGCTCAACAGAACTGGGTTTAGCTGGAATAATGTGATGAAATGTGTGGAGGTTGACAATGGAGAAACATGGAAATCCTATGTTCAGACTCATAGGGAGGCAGATAAGTGGAGGGGAAAATATTTTCCAATTTTTGACAGACTTACTCATATATTTGATGTGGACCGCGCTACTGTAATAACAACCCAAGCACGAGCTGAGATAGCCGAGGAGATCAACTGTTTTGAGGTTAATTCAACTGACTTTGGGATAGAGGAAGGCACTTGTCCAAGGTCAGTTGACCAATTGATTACCAAGCAAACAGATCATTCTCATTCCTCACAAAGAAAGAGGAGGAGAGAGGATGATACAGGAGGTAGTAGTCATATCGATGAGACAAGTAAAAGAAGGCGCAGACGTACGTGGACCGAGGAGGAGGAAGACGCACTTTTAGGCATTCTAGAGGATCTAATTGCGAAGGGTCACCGTTACGAAAAGGGTACTTTCAAACCTGGTACGTCAACTCTAATAGAAGATGCCTTATCCAAATTATGTCCAGCCTCAGGACTGAAAGCTAGCCCACATGTTGAGTCAAAAATTAAAAAGTTGAAACAGGAATGCAGTATTGTATGTGACATGCTCAACACAGATGGCTTTAGTTGGAACAATGAGATGAAATGTGTGGAGGTTGACAGTGAAACATGGAAAAGATATGTTCAGCATAAGGAGGCAGATAAGTGGAGGGGGAAATTTTTTCCACTTTTTGAAAGACTTATTTATATATTTGAAGTGGGCAGCCCAATTGCAAAAACAACCCAAACTCCAGCTGAAATGGTTGAGGAGATGAACTGTGTTGAGTTTAATACAACTGACTTTGGGACACTGAAAGATGCTTGTCCAAAGGCAGTTGAACAAGTCTCAACAACCAAGGACATAGATCAATCTCATTCACTACCAAGTAAGGGAAGAGAAGATGATATGGGAGGTATTCATCATATCAATGAGACAAATAGAAAAAGGAGAAGGCGTAAATGGACCAAGGAGGAGGAGGATGCACTTTTAAGCATCTTAGAGGATCTAGTTGCAAAGGGTCATCGTTTCCATAATAAAACTTTCAGATCTGGTACATTGACACTAATAGAAAACACTTTGTGCAATTTATGTCCAGCATCAGGACTGAAAGCTTACCCACACGTTGAGTCAAAAATTAAAAAATTGAAGAAGGGATTCAGTACAGTGTGTGACATACTCAACAGTGGGTTTGGGTGGAATGATAGAACAAAATGTGTGGTGGTTGAATGTGAAGAATCATGGAAAGGCTTTGTTCAGCATCATAAGGAGGCAGGGAAGTGGAGATACAGACATTTTCCACTTTATGATAGACTTGCTCATATATTTGGAGTGGACCCCTCAAATGTAAAAGCATCTCAAGCTCATATTGAAGCAGTAGAGGGGATTAACAGTGATGAGGTTGAGTCAGTTGACTTGGGGATAGAGGAAGACACTAACTCAAGGTCTGTTGACCGCATCTCAACAAACAAAGAAGCAGATAATTCTCATTCCCCACAAAGAAATAGCAGAAGACAAGATGATGATTTAGGTGCTTCGTTAAACAAAGTTGCTGCGTCATTTGTGGGAATGATGCAAACTTCAAAGGAGCAAATGCGAGTACTAATCGAAAATCTGCAGTCGAAAGATAAAAATGAGTCCCTGCAACCAAAAGATGTCAATGAGTCTCTATCCAAAGATAAGAATGAATCTCAGCAATCCAAAGGTAACAATGAATCTCTGCAGTCAAAAGATAACAGAACAGGTCAGTTACGGTCTGAGCTTAAAAAGTTGGGGCTTTCTATTACTGATCGAGTGAAAGCATTAAGACTACTCATGGCTGATACTTGGAATGCTGATTTTTTTCTTACTTTGGATGAGGAAGAGAAATTGGAATTTGTAAAGCAACTCATTGATGAATCATCTAAGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006338 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0051276 GO:0070013 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MRG Tudor-knot

Protein Analysis

871

Amino Acids

99.76

Weight (kDa)

6.03

Isoelectric Point (pI)

53.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_3	PF12776	149 - 245	1.8e-06	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_3	PF12776	352 - 449	7.9e-11	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_3	PF12776	555 - 650	1.7e-08	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000261)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g18411 FvH4_1g22560 FvH4_1g24290 FvH4_1g24290 FvH4_1g24290 FvH4_1g29434 FvH4_2g04031 FvH4_2g04811 FvH4_2g07610 FvH4_2g09412 FvH4_3g15552 FvH4_3g30720 FvH4_4g05810 FvH4_4g09541 FvH4_4g15171 FvH4_6g09145 FvH4_6g49541 FvH4_7g00320 FvH4_7g11552
malus_domestica	MD00G1072400.v1.1 MD01G1188100.v1.1 MD07G1132000.v1.1 MD08G1190700.v1.1 MD10G1011200.v1.1 MD14G1164100.v1.1 MD15G1289200.v1.1 MD15G1289300.v1.1 MD17G1245100.v1.1
prunus_persica	Prupe.6G228600_v2.0.a1
pyrus_communis	pycom01g07070 pycom02g06890 pycom02g06900 pycom02g13930 pycom04g07470 pycom04g11770 pycom04g21930 pycom05g08520 pycom06g04490 pycom06g09560 pycom07g03750 pycom08g08760 pycom08g13660 pycom09g11520 pycom09g14250 pycom09g14770 pycom10g00720 pycom10g01290 pycom10g10480 pycom10g15700 pycom12420g00130 pycom12g05380 pycom12g08750 pycom13g19010 pycom13g29080 pycom14g06210 pycom14g13680 pycom14g19850 pycom15g22070 pycom15g23440 pycom15g24950 pycom15g25280 pycom16g11100 pycom16g17080 pycom16g26310 pycom17g15650 pycom17g15670 pycom17g20370
rosa_chinensis	RchiOBHm_Chr1g0373591 RchiOBHm_Chr2g0105551 RchiOBHm_Chr2g0106711 RchiOBHm_Chr2g0106721 RchiOBHm_Chr7g0219611
rosa_laevigata	RLG00000013773 RLG00000017436 RLG00000017533
rosa_multiflora	Rmu_co8001842.1_g000001 Rmu_co8158450.1_g000001 Rmu_sc0000516.1_g000067 Rmu_sc0000566.1_g000009 Rmu_sc0000965.1_g000025 Rmu_sc0001718.1_g000001 Rmu_sc0001719.1_g000020 Rmu_sc0001822.1_g000025 Rmu_sc0002219.1_g000003 Rmu_sc0002460.1_g000059 Rmu_sc0002757.1_g000001 Rmu_sc0002860.1_g000001 Rmu_sc0004531.1_g000001 Rmu_sc0005558.1_g000003 Rmu_sc0011218.1_g000001 Rmu_sc0011998.1_g000003 Rmu_sc0015560.1_g000002 Rmu_sc0015560.1_g000003
rosa_roxburghii	Rroxscaffold_1G00004200 Rroxscaffold_1G00026570 Rroxscaffold_1G00040370 Rroxscaffold_1G00044120 Rroxscaffold_1G00049590 Rroxscaffold_1G00059030 Rroxscaffold_2G00108440 Rroxscaffold_2G00108850 Rroxscaffold_2G00130680 Rroxscaffold_2G00132980 Rroxscaffold_2G00136860 Rroxscaffold_3G00218610 Rroxscaffold_4G00309940 Rroxscaffold_6G00405560
rosa_rugosa	Rorug02G0138000 Rorug02G0138100 Rorug02G0138100 Rorug06G0154000
rosa_samantha	Rh1AG121500 Rh1CG116300 Rh2AG189000 Rh2AG509600 Rh2BG200200 Rh2CG194100 Rh2DG195300 Rh5AG114400 Rh5DG488800
rosa_wichuraiana	Rw0G022020 Rw1G023650 Rw1G026380 Rw1G034750 Rw1G040770 Rw2G014870 Rw2G016560 Rw4G031190 Rw5G026570 Rw6G003020 Rw6G012060 Rw7G014300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	822
AccIII	TCCGGA	1 cut(s)	392
AciI	CCGC	4 cut(s)	167, 200, 820, 2158
AclWI	GGATC	3 cut(s)	495, 1107, 1716
AcsI	RAATTY	3 cut(s)	158, 1382, 2576
AcuI	CTGAAG	2 cut(s)	107, 216
AdeI	CACNNNGTG	1 cut(s)	1785
AfaI	GTAC	9 cut(s)	274, 523, 538, 1054, 1135, 1150, 1759, 1867, 2304
AfiI	CCNNNNNNNGG	3 cut(s)	1196, 1595, 1805
AflIII	ACRYGT	2 cut(s)	1216, 1825
AjnI	CCWGG	1 cut(s)	1144
AluBI	AGCT	9 cut(s)	236, 596, 678, 851, 1208, 1460, 1817, 2066, 2464
AluI	AGCT	9 cut(s)	236, 596, 678, 851, 1208, 1460, 1817, 2066, 2464
Alw21I	GWGCWC	1 cut(s)	211
Alw26I	GTCTC	7 cut(s)	98, 228, 331, 1022, 1555, 1631, 2373
Alw44I	GTGCAC	1 cut(s)	207
AlwI	GGATC	3 cut(s)	495, 1107, 1716
Aor13HI	TCCGGA	1 cut(s)	392
ApaLI	GTGCAC	1 cut(s)	207
ApeKI	GCWGC	3 cut(s)	639, 1428, 2255
ApoI	RAATTY	3 cut(s)	158, 1382, 2576
Asp700I	GAANNNNTTC	2 cut(s)	20, 1859
AspLEI	GCGC	2 cut(s)	824, 1047
AspS9I	GGNCC	6 cut(s)	447, 503, 817, 1059, 1668, 2038
AsuHPI	GGTGA	3 cut(s)	55, 354, 1109
AsuNHI	GCTAGC	1 cut(s)	1208
AvaII	GGWCC	6 cut(s)	447, 503, 817, 1059, 1668, 2038
AxyI	CCTNAGG	2 cut(s)	583, 1195
BaeGI	GKGCMC	1 cut(s)	211
BarI	GAAGNNNNNNTAC	2 cut(s)	1973, 2005
BauI	CACGAG	1 cut(s)	846
BbsI	GAAGAC	4 cut(s)	303, 1080, 2139, 2221
Bbv12I	GWGCWC	1 cut(s)	211
BbvI	GCAGC	3 cut(s)	651, 1440, 2242
BccI	CCATC	4 cut(s)	82, 137, 512, 1277
BciT130I	CCWGG	1 cut(s)	1146
BcoDI	GTCTC	7 cut(s)	98, 228, 331, 1022, 1555, 1631, 2373
BfaI	CTAG	7 cut(s)	482, 491, 578, 597, 1094, 1209, 1712
BfmI	CTRYAG	2 cut(s)	2318, 2423
BglII	AGATCT	2 cut(s)	530, 1751
BisI	GCNGC	3 cut(s)	640, 1429, 2256
BlsI	GCNGC	3 cut(s)	641, 1430, 2257
BmcAI	AGTACT	1 cut(s)	2304
Bme1390I	CCNGG	1 cut(s)	1146
Bme18I	GGWCC	6 cut(s)	447, 503, 817, 1059, 1668, 2038
BmgT120I	GGNCC	6 cut(s)	447, 503, 817, 1059, 1668, 2038
BmiI	GGNNCC	2 cut(s)	504, 2040
BmrFI	CCNGG	1 cut(s)	1146
BmrI	ACTGGG	2 cut(s)	63, 678
BmtI	GCTAGC	1 cut(s)	1212
BmuI	ACTGGG	2 cut(s)	63, 678
BpiI	GAAGAC	4 cut(s)	303, 1080, 2139, 2221
BpmI	CTGGAG	1 cut(s)	1440
BpuEI	CTTGAG	2 cut(s)	2046, 2128
Bsa29I	ATCGAT	1 cut(s)	1023
BsaAI	YACGTR	1 cut(s)	1056
BsaBI	GATNNNNATC	1 cut(s)	243
BsaI	GGTCTC	1 cut(s)	228
BsaJI	CCNNGG	7 cut(s)	308, 450, 861, 923, 1062, 1560, 1671
BsaWI	WCCGGW	1 cut(s)	392
BsaXI	ACNNNNNCTCC	4 cut(s)	1438, 1468, 1645, 1675
Bsc4I	CCNNNNNNNGG	3 cut(s)	1196, 1595, 1805
Bse1I	ACTGG	3 cut(s)	58, 629, 673
Bse21I	CCTNAGG	2 cut(s)	583, 1195
Bse8I	GATNNNNATC	1 cut(s)	243
BseAI	TCCGGA	1 cut(s)	392
BseBI	CCWGG	1 cut(s)	1146
BseCI	ATCGAT	1 cut(s)	1023
BseDI	CCNNGG	7 cut(s)	308, 450, 861, 923, 1062, 1560, 1671
BseGI	GGATG	5 cut(s)	271, 469, 1003, 1690, 2563
BseJI	GATNNNNATC	1 cut(s)	243
BseLI	CCNNNNNNNGG	3 cut(s)	1196, 1595, 1805
BseMII	CTCAG	5 cut(s)	597, 843, 1209, 2408, 2451
BseNI	ACTGG	3 cut(s)	58, 629, 673
BseSI	GKGCMC	1 cut(s)	211
BseXI	GCAGC	3 cut(s)	651, 1440, 2242
Bsh1236I	CGCG	1 cut(s)	822
BshVI	ATCGAT	1 cut(s)	1023
BsiHKAI	GWGCWC	1 cut(s)	211
BsiSI	CCGG	1 cut(s)	393
BsiWI	CGTACG	1 cut(s)	1052
BslFI	GGGAC	2 cut(s)	1525, 2326
BslI	CCNNNNNNNGG	3 cut(s)	1196, 1595, 1805
BsmAI	GTCTC	7 cut(s)	98, 228, 331, 1022, 1555, 1631, 2373
BsmFI	GGGAC	2 cut(s)	1525, 2326
BsmI	GAATGC	4 cut(s)	477, 1089, 1256, 2539
Bso31I	GGTCTC	1 cut(s)	228
Bsp1286I	GDGCHC	1 cut(s)	211
Bsp13I	TCCGGA	1 cut(s)	392
BspACI	CCGC	4 cut(s)	167, 200, 820, 2158
BspCNI	CTCAG	5 cut(s)	596, 844, 1208, 2407, 2452
BspDI	ATCGAT	1 cut(s)	1023
BspEI	TCCGGA	1 cut(s)	392
BspFNI	CGCG	1 cut(s)	822
BspLI	GGNNCC	2 cut(s)	504, 2040
BspMAI	CTGCAG	2 cut(s)	2322, 2427
BspOI	GCTAGC	1 cut(s)	1212
BspPI	GGATC	3 cut(s)	495, 1107, 1716
BspTNI	GGTCTC	1 cut(s)	228
BsrI	ACTGG	3 cut(s)	58, 629, 673
BssECI	CCNNGG	7 cut(s)	308, 450, 861, 923, 1062, 1560, 1671
BssSI	CACGAG	1 cut(s)	846
BssT1I	CCWWGG	5 cut(s)	308, 450, 923, 1560, 1671
Bst2BI	CACGAG	1 cut(s)	846
Bst2UI	CCWGG	1 cut(s)	1146
Bst6I	CTCTTC	3 cut(s)	373, 1594, 2559
BstBAI	YACGTR	1 cut(s)	1056
BstC8I	GCNNGC	1 cut(s)	1210
BstDEI	CTNAG	7 cut(s)	583, 852, 1195, 1702, 2394, 2460, 2607
BstEII	GGTNACC	1 cut(s)	1115
BstF5I	GGATG	5 cut(s)	271, 469, 1003, 1690, 2563
BstFNI	CGCG	1 cut(s)	822
BstHHI	GCGC	2 cut(s)	824, 1047
BstMAI	GTCTC	7 cut(s)	98, 228, 331, 1022, 1555, 1631, 2373
BstMWI	GCNNNNNNNGC	3 cut(s)	206, 857, 2063
BstNI	CCWGG	1 cut(s)	1146
BstNSI	RCATGY	3 cut(s)	658, 1220, 1273
BstPI	GGTNACC	1 cut(s)	1115
BstSCI	CCNGG	1 cut(s)	1144
BstSFI	CTRYAG	2 cut(s)	2318, 2423
BstSLI	GKGCMC	1 cut(s)	211
BstUI	CGCG	1 cut(s)	822
BstV1I	GCAGC	3 cut(s)	651, 1440, 2242
BstV2I	GAAGAC	4 cut(s)	303, 1080, 2139, 2221
BstX2I	RGATCY	5 cut(s)	487, 530, 1099, 1708, 1751
BstYI	RGATCY	5 cut(s)	487, 530, 1099, 1708, 1751
Bsu15I	ATCGAT	1 cut(s)	1023
Bsu36I	CCTNAGG	2 cut(s)	583, 1195
BsuTUI	ATCGAT	1 cut(s)	1023
BtsCI	GGATG	5 cut(s)	271, 469, 1003, 1690, 2563
BtsIMutI	CAGTG	5 cut(s)	1333, 1514, 1875, 1894, 2101
Cac8I	GCNNGC	1 cut(s)	1210
CfoI	GCGC	2 cut(s)	824, 1047
Cfr13I	GGNCC	6 cut(s)	447, 503, 817, 1059, 1668, 2038
ClaI	ATCGAT	1 cut(s)	1023
CseI	GACGC	3 cut(s)	554, 1085, 2247
CsiI	ACCWGGT	1 cut(s)	1144
Csp6I	GTAC	9 cut(s)	273, 522, 537, 1053, 1134, 1149, 1758, 1866, 2303
CspCI	CAANNNNNGTGG	2 cut(s)	1902, 1937
CviAII	CATG	8 cut(s)	108, 655, 723, 1217, 1270, 1335, 1944, 2518
CviQI	GTAC	9 cut(s)	273, 522, 537, 1053, 1134, 1149, 1758, 1866, 2303
DdeI	CTNAG	7 cut(s)	583, 852, 1195, 1702, 2394, 2460, 2607
DraIII	CACNNNGTG	1 cut(s)	1785
Eam1104I	CTCTTC	3 cut(s)	373, 1594, 2559
EarI	CTCTTC	3 cut(s)	373, 1594, 2559
Eco130I	CCWWGG	5 cut(s)	308, 450, 923, 1560, 1671
Eco31I	GGTCTC	1 cut(s)	228
Eco47I	GGWCC	6 cut(s)	447, 503, 817, 1059, 1668, 2038
Eco57I	CTGAAG	2 cut(s)	107, 216
Eco81I	CCTNAGG	2 cut(s)	583, 1195
Eco91I	GGTNACC	1 cut(s)	1115
EcoO109I	RGGNCCY	1 cut(s)	503
EcoO65I	GGTNACC	1 cut(s)	1115
EcoRII	CCWGG	1 cut(s)	1144
EcoT14I	CCWWGG	5 cut(s)	308, 450, 923, 1560, 1671
ErhI	CCWWGG	5 cut(s)	308, 450, 923, 1560, 1671
FaeI	CATG	8 cut(s)	111, 658, 726, 1220, 1273, 1338, 1947, 2521
FalI	AAGNNNNNCTT	4 cut(s)	105, 137, 1065, 1097
FaqI	GGGAC	2 cut(s)	1525, 2326
FatI	CATG	8 cut(s)	107, 654, 722, 1216, 1269, 1334, 1943, 2517
Fnu4HI	GCNGC	3 cut(s)	640, 1429, 2256
FokI	GGATG	5 cut(s)	278, 476, 1010, 1697, 2570
Fsp4HI	GCNGC	3 cut(s)	640, 1429, 2256
FspBI	CTAG	7 cut(s)	482, 491, 578, 597, 1094, 1209, 1712
GlaI	GCGC	2 cut(s)	823, 1046
GluI	GCNGC	3 cut(s)	640, 1429, 2256
GsuI	CTGGAG	1 cut(s)	1440
HapII	CCGG	1 cut(s)	393
HgaI	GACGC	3 cut(s)	554, 1085, 2247
HhaI	GCGC	2 cut(s)	824, 1047
Hin1II	CATG	8 cut(s)	111, 658, 726, 1220, 1273, 1338, 1947, 2521
Hin6I	GCGC	2 cut(s)	822, 1045
HinP1I	GCGC	2 cut(s)	822, 1045
HincII	GTYRAC	7 cut(s)	319, 709, 934, 1155, 1324, 2116, 2155
HindII	GTYRAC	7 cut(s)	319, 709, 934, 1155, 1324, 2116, 2155
HindIII	AAGCTT	1 cut(s)	1815
HpaII	CCGG	1 cut(s)	393
HphI	GGTGA	3 cut(s)	55, 354, 1109
Hpy188I	TCNGA	4 cut(s)	530, 741, 1751, 2461
Hpy188III	TCNNGA	7 cut(s)	225, 248, 393, 482, 1094, 1197, 1806
HpyAV	CCTTC	6 cut(s)	212, 905, 1035, 1105, 1650, 1849
HpyCH4IV	ACGT	4 cut(s)	1051, 1055, 1151, 1827
HpyF10VI	GCNNNNNNNGC	3 cut(s)	206, 857, 2063
HpyF3I	CTNAG	7 cut(s)	583, 852, 1195, 1702, 2394, 2460, 2607
HpySE526I	ACGT	4 cut(s)	1051, 1055, 1151, 1827
Hsp92II	CATG	8 cut(s)	111, 658, 726, 1220, 1273, 1338, 1947, 2521
HspAI	GCGC	2 cut(s)	822, 1045
Kpn2I	TCCGGA	1 cut(s)	392
LmnI	GCTCC	1 cut(s)	2290
Lsp1109I	GCAGC	3 cut(s)	651, 1440, 2242
MabI	ACCWGGT	1 cut(s)	1144
MaeI	CTAG	7 cut(s)	482, 491, 578, 597, 1094, 1209, 1712
MaeII	ACGT	4 cut(s)	1051, 1055, 1151, 1827
MaeIII	GTNAC	7 cut(s)	650, 1115, 1121, 1265, 1874, 2408, 2451
MfeI	CAATTG	2 cut(s)	938, 1434
MflI	RGATCY	5 cut(s)	487, 530, 1099, 1708, 1751
MhlI	GDGCHC	1 cut(s)	211
MlyI	GAGTC	8 cut(s)	383, 617, 736, 1232, 1841, 2117, 2348, 2375
MmeI	TCCRAC	1 cut(s)	1274
MroI	TCCGGA	1 cut(s)	392
MroXI	GAANNNNTTC	2 cut(s)	20, 1859
MslI	CAYNNNNRTG	2 cut(s)	1023, 1632
MspA1I	CMGCKG	2 cut(s)	236, 1460
MspI	CCGG	1 cut(s)	393
MspR9I	CCNGG	1 cut(s)	1146
MunI	CAATTG	2 cut(s)	938, 1434
Mva1269I	GAATGC	4 cut(s)	477, 1089, 1256, 2539
MvaI	CCWGG	1 cut(s)	1146
MvnI	CGCG	1 cut(s)	822
MwoI	GCNNNNNNNGC	3 cut(s)	206, 857, 2063
NheI	GCTAGC	1 cut(s)	1208
NlaIII	CATG	8 cut(s)	111, 658, 726, 1220, 1273, 1338, 1947, 2521
NlaIV	GGNNCC	2 cut(s)	504, 2040
NmeAIII	GCCGAG	1 cut(s)	886
NmuCI	GTSAC	4 cut(s)	650, 1115, 1265, 1874
NspI	RCATGY	3 cut(s)	658, 1220, 1273
PciI	ACATGT	1 cut(s)	1216
PctI	GAATGC	4 cut(s)	477, 1089, 1256, 2539
PdmI	GAANNNNTTC	2 cut(s)	20, 1859
PfeI	GAWTC	5 cut(s)	1860, 1940, 2390, 2417, 2600
Pfl23II	CGTACG	1 cut(s)	1052
PflFI	GACNNNGTC	1 cut(s)	323
PkrI	GCNGC	3 cut(s)	641, 1430, 2257
PleI	GAGTC	8 cut(s)	383, 616, 736, 1231, 1840, 2116, 2347, 2374
PpsI	GAGTC	8 cut(s)	383, 616, 736, 1231, 1840, 2116, 2347, 2374
Ppu21I	YACGTR	1 cut(s)	1056
PpuMI	RGGWCCY	1 cut(s)	503
PscI	ACATGT	1 cut(s)	1216
Psp5II	RGGWCCY	1 cut(s)	503
Psp6I	CCWGG	1 cut(s)	1144
PspEI	GGTNACC	1 cut(s)	1115
PspGI	CCWGG	1 cut(s)	1144
PspLI	CGTACG	1 cut(s)	1052
PspN4I	GGNNCC	2 cut(s)	504, 2040
PspPI	GGNCC	6 cut(s)	447, 503, 817, 1059, 1668, 2038
PspPPI	RGGWCCY	1 cut(s)	503
PstI	CTGCAG	2 cut(s)	2322, 2427
PsuI	RGATCY	5 cut(s)	487, 530, 1099, 1708, 1751
PsyI	GACNNNGTC	1 cut(s)	323
PvuII	CAGCTG	2 cut(s)	236, 1460
RsaI	GTAC	9 cut(s)	274, 523, 538, 1054, 1135, 1150, 1759, 1867, 2304
RsaNI	GTAC	9 cut(s)	273, 522, 537, 1053, 1134, 1149, 1758, 1866, 2303
RseI	CAYNNNNRTG	2 cut(s)	1023, 1632
SatI	GCNGC	3 cut(s)	640, 1429, 2256
Sau96I	GGNCC	6 cut(s)	447, 503, 817, 1059, 1668, 2038
ScaI	AGTACT	1 cut(s)	2304
SchI	GAGTC	8 cut(s)	383, 617, 736, 1232, 1841, 2117, 2348, 2375
ScrFI	CCNGG	1 cut(s)	1146
SduI	GDGCHC	1 cut(s)	211
SexAI	ACCWGGT	1 cut(s)	1144
SfcI	CTRYAG	2 cut(s)	2318, 2423
SinI	GGWCC	6 cut(s)	447, 503, 817, 1059, 1668, 2038
SmiMI	CAYNNNNRTG	2 cut(s)	1023, 1632
SmlI	CTYRAG	2 cut(s)	2061, 2143
SmoI	CTYRAG	2 cut(s)	2061, 2143
SsiI	CCGC	4 cut(s)	167, 200, 820, 2158
SspI	AATATT	2 cut(s)	9, 776
SspMI	CTAG	7 cut(s)	482, 491, 578, 597, 1094, 1209, 1712
StyD4I	CCNGG	1 cut(s)	1144
StyI	CCWWGG	5 cut(s)	308, 450, 923, 1560, 1671
TaiI	ACGT	4 cut(s)	1054, 1058, 1154, 1830
TaqI	TCGA	5 cut(s)	226, 1023, 2310, 2324, 2494
TaqII	GACCGA	1 cut(s)	1076
TatI	WGTACW	3 cut(s)	272, 1865, 2302
TfiI	GAWTC	5 cut(s)	1860, 1940, 2390, 2417, 2600
TscAI	CASTG	5 cut(s)	1333, 1521, 1875, 1894, 2101
TseFI	GTSAC	4 cut(s)	650, 1115, 1265, 1874
TseI	GCWGC	3 cut(s)	639, 1428, 2255
Tsp45I	GTSAC	4 cut(s)	650, 1115, 1265, 1874
TspGWI	ACGGA	1 cut(s)	14
TspRI	CASTG	5 cut(s)	1333, 1521, 1875, 1894, 2101
Tth111I	GACNNNGTC	1 cut(s)	323
VneI	GTGCAC	1 cut(s)	207
VpaK11BI	GGWCC	6 cut(s)	447, 503, 817, 1059, 1668, 2038
XapI	RAATTY	3 cut(s)	158, 1382, 2576
XbaI	TCTAGA	2 cut(s)	481, 1093
XceI	RCATGY	3 cut(s)	658, 1220, 1273
XmnI	GAANNNNTTC	2 cut(s)	20, 1859
XspI	CTAG	7 cut(s)	482, 491, 578, 597, 1094, 1209, 1712
ZrmI	AGTACT	1 cut(s)	2304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.