nuclease HARBI1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 172, 1543 |
| Acc36I | ACCTGC | 2 cut(s) | 172, 1543 |
| Acc65I | GGTACC | 2 cut(s) | 562, 1975 |
| AccB1I | GGYRCC | 2 cut(s) | 562, 1975 |
| AccI | GTMKAC | 1 cut(s) | 1147 |
| AciI | CCGC | 3 cut(s) | 1920, 2262, 3420 |
| AclI | AACGTT | 1 cut(s) | 2176 |
| AclWI | GGATC | 6 cut(s) | 547, 716, 1254, 1724, 2303, 3309 |
| AcsI | RAATTY | 5 cut(s) | 20, 1156, 1668, 3142, 3185 |
| AcuI | CTGAAG | 2 cut(s) | 1022, 3246 |
| AcvI | CACGTG | 1 cut(s) | 222 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 282, 412, 2075 |
| AflIII | ACRYGT | 4 cut(s) | 219, 221, 652, 1351 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2247 |
| AjnI | CCWGG | 1 cut(s) | 207 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2166, 2198 |
| Alw21I | GWGCWC | 2 cut(s) | 763, 954 |
| Alw26I | GTCTC | 7 cut(s) | 286, 404, 1289, 1290, 1342, 1543, 1625 |
| Alw44I | GTGCAC | 1 cut(s) | 759 |
| AlwI | GGATC | 6 cut(s) | 547, 716, 1254, 1724, 2303, 3309 |
| Ama87I | CYCGRG | 1 cut(s) | 1082 |
| AoxI | GGCC | 2 cut(s) | 670, 1958 |
| ApaLI | GTGCAC | 1 cut(s) | 759 |
| ApeKI | GCWGC | 3 cut(s) | 146, 158, 167 |
| ApoI | RAATTY | 5 cut(s) | 20, 1156, 1668, 3142, 3185 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3310, 3342 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 507, 2116, 3386 |
| Asp718I | GGTACC | 2 cut(s) | 562, 1975 |
| AspA2I | CCTAGG | 1 cut(s) | 1733 |
| AspS9I | GGNCC | 2 cut(s) | 822, 2794 |
| AsuC2I | CCSGG | 1 cut(s) | 1905 |
| AsuHPI | GGTGA | 3 cut(s) | 2063, 2372, 3065 |
| AsuNHI | GCTAGC | 1 cut(s) | 212 |
| AvaI | CYCGRG | 1 cut(s) | 1082 |
| AvaII | GGWCC | 2 cut(s) | 822, 2794 |
| AvrII | CCTAGG | 1 cut(s) | 1733 |
| BaeGI | GKGCMC | 1 cut(s) | 763 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 546, 554, 579, 587 |
| BanI | GGYRCC | 2 cut(s) | 562, 1975 |
| BanII | GRGCYC | 1 cut(s) | 954 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2598, 2630 |
| BbrPI | CACGTG | 1 cut(s) | 222 |
| BbsI | GAAGAC | 1 cut(s) | 875 |
| Bbv12I | GWGCWC | 2 cut(s) | 763, 954 |
| BbvI | GCAGC | 3 cut(s) | 133, 145, 154 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 2927, 2961, 2978, 3012, 3351, 3385 |
| BciT130I | CCWGG | 1 cut(s) | 209 |
| BciVI | GTATCC | 2 cut(s) | 1697, 2202 |
| BcnI | CCSGG | 1 cut(s) | 1905 |
| BcoDI | GTCTC | 7 cut(s) | 286, 404, 1289, 1290, 1342, 1543, 1625 |
| BfmI | CTRYAG | 5 cut(s) | 795, 983, 1542, 1725, 2304 |
| BfuAI | ACCTGC | 2 cut(s) | 172, 1543 |
| BfuI | GTATCC | 2 cut(s) | 1697, 2202 |
| BisI | GCNGC | 3 cut(s) | 147, 159, 168 |
| BlnI | CCTAGG | 1 cut(s) | 1733 |
| BlsI | GCNGC | 3 cut(s) | 148, 160, 169 |
| Bme1390I | CCNGG | 2 cut(s) | 209, 1905 |
| Bme18I | GGWCC | 2 cut(s) | 822, 2794 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2247 |
| BmeT110I | CYCGRG | 1 cut(s) | 1082 |
| BmgT120I | GGNCC | 2 cut(s) | 822, 2794 |
| BmiI | GGNNCC | 5 cut(s) | 564, 1918, 1977, 2456, 3157 |
| BmrFI | CCNGG | 2 cut(s) | 209, 1905 |
| BmsI | GCATC | 6 cut(s) | 44, 133, 1931, 1936, 3201, 3301 |
| BmtI | GCTAGC | 1 cut(s) | 216 |
| BpiI | GAAGAC | 1 cut(s) | 875 |
| BpmI | CTGGAG | 1 cut(s) | 171 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1334, 2421, 3027, 3267 |
| BpuEI | CTTGAG | 3 cut(s) | 2547, 2648, 3362 |
| BpuMI | CCSGG | 1 cut(s) | 1905 |
| Bsa29I | ATCGAT | 1 cut(s) | 1467 |
| BsaAI | YACGTR | 1 cut(s) | 222 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1245 |
| BsaI | GGTCTC | 1 cut(s) | 1543 |
| BsaJI | CCNNGG | 5 cut(s) | 566, 1733, 1904, 2415, 3159 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1541, 1571 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 282, 412, 2075 |
| Bse1I | ACTGG | 2 cut(s) | 719, 2392 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1245 |
| BseBI | CCWGG | 1 cut(s) | 209 |
| BseCI | ATCGAT | 1 cut(s) | 1467 |
| BseDI | CCNNGG | 5 cut(s) | 566, 1733, 1904, 2415, 3159 |
| BseGI | GGATG | 3 cut(s) | 1534, 2915, 3216 |
| BseJI | GATNNNNATC | 1 cut(s) | 1245 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 282, 412, 2075 |
| BseMII | CTCAG | 4 cut(s) | 291, 967, 2435, 3041 |
| BseNI | ACTGG | 2 cut(s) | 719, 2392 |
| BseRI | GAGGAG | 1 cut(s) | 1562 |
| BseSI | GKGCMC | 1 cut(s) | 763 |
| BseXI | GCAGC | 3 cut(s) | 133, 145, 154 |
| BsgI | GTGCAG | 2 cut(s) | 144, 2906 |
| BshFI | GGCC | 2 cut(s) | 672, 1960 |
| BshNI | GGYRCC | 2 cut(s) | 562, 1975 |
| BshVI | ATCGAT | 1 cut(s) | 1467 |
| BsiHKAI | GWGCWC | 2 cut(s) | 763, 954 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1082 |
| BsiSI | CCGG | 1 cut(s) | 1904 |
| BslFI | GGGAC | 2 cut(s) | 1685, 3387 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 282, 412, 2075 |
| BsmAI | GTCTC | 7 cut(s) | 286, 404, 1289, 1290, 1342, 1543, 1625 |
| BsmBI | CGTCTC | 1 cut(s) | 1289 |
| BsmFI | GGGAC | 2 cut(s) | 1685, 3387 |
| BsmI | GAATGC | 4 cut(s) | 934, 2149, 2416, 2560 |
| BsnI | GGCC | 2 cut(s) | 672, 1960 |
| Bso31I | GGTCTC | 1 cut(s) | 1543 |
| BsoBI | CYCGRG | 1 cut(s) | 1082 |
| Bsp1286I | GDGCHC | 2 cut(s) | 763, 954 |
| Bsp19I | CCATGG | 1 cut(s) | 2415 |
| BspACI | CCGC | 3 cut(s) | 1920, 2262, 3420 |
| BspANI | GGCC | 2 cut(s) | 672, 1960 |
| BspCNI | CTCAG | 4 cut(s) | 290, 966, 2434, 3040 |
| BspDI | ATCGAT | 1 cut(s) | 1467 |
| BspHI | TCATGA | 1 cut(s) | 780 |
| BspLI | GGNNCC | 5 cut(s) | 564, 1918, 1977, 2456, 3157 |
| BspMAI | CTGCAG | 2 cut(s) | 799, 987 |
| BspMI | ACCTGC | 2 cut(s) | 172, 1543 |
| BspOI | GCTAGC | 1 cut(s) | 216 |
| BspPI | GGATC | 6 cut(s) | 547, 716, 1254, 1724, 2303, 3309 |
| BspT107I | GGYRCC | 2 cut(s) | 562, 1975 |
| BspTNI | GGTCTC | 1 cut(s) | 1543 |
| BsrI | ACTGG | 2 cut(s) | 719, 2392 |
| BssECI | CCNNGG | 5 cut(s) | 566, 1733, 1904, 2415, 3159 |
| BssNAI | GTATAC | 1 cut(s) | 1148 |
| BssT1I | CCWWGG | 3 cut(s) | 566, 1733, 2415 |
| Bst1107I | GTATAC | 1 cut(s) | 1148 |
| Bst2UI | CCWGG | 1 cut(s) | 209 |
| Bst4CI | ACNGT | 5 cut(s) | 115, 562, 1379, 2861, 2934 |
| Bst6I | CTCTTC | 3 cut(s) | 579, 1075, 3200 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 167 |
| BstBAI | YACGTR | 1 cut(s) | 222 |
| BstC8I | GCNNGC | 4 cut(s) | 214, 932, 2189, 3418 |
| BstDSI | CCRYGG | 1 cut(s) | 2415 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 410 |
| BstF5I | GGATG | 3 cut(s) | 1534, 2915, 3216 |
| BstMAI | GTCTC | 7 cut(s) | 286, 404, 1289, 1290, 1342, 1543, 1625 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 155, 164, 167, 213, 931, 3093 |
| BstNI | CCWGG | 1 cut(s) | 209 |
| BstNSI | RCATGY | 4 cut(s) | 89, 656, 1355, 1802 |
| BstSCI | CCNGG | 2 cut(s) | 207, 1903 |
| BstSFI | CTRYAG | 5 cut(s) | 795, 983, 1542, 1725, 2304 |
| BstSLI | GKGCMC | 1 cut(s) | 763 |
| BstV1I | GCAGC | 3 cut(s) | 133, 145, 154 |
| BstV2I | GAAGAC | 1 cut(s) | 875 |
| BstX2I | RGATCY | 2 cut(s) | 1729, 2308 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 208 |
| BstYI | RGATCY | 2 cut(s) | 1729, 2308 |
| BstZ17I | GTATAC | 1 cut(s) | 1148 |
| Bsu15I | ATCGAT | 1 cut(s) | 1467 |
| BsuI | GTATCC | 2 cut(s) | 1697, 2202 |
| BsuRI | GGCC | 2 cut(s) | 672, 1960 |
| BsuTUI | ATCGAT | 1 cut(s) | 1467 |
| BtgI | CCRYGG | 1 cut(s) | 2415 |
| BtgZI | GCGATG | 1 cut(s) | 1756 |
| BtsCI | GGATG | 3 cut(s) | 1534, 2915, 3216 |
| BtsIMutI | CAGTG | 4 cut(s) | 843, 2399, 2866, 2930 |
| BveI | ACCTGC | 2 cut(s) | 172, 1543 |
| Cac8I | GCNNGC | 4 cut(s) | 214, 932, 2189, 3418 |
| CciI | TCATGA | 1 cut(s) | 780 |
| Cfr13I | GGNCC | 2 cut(s) | 822, 2794 |
| ClaI | ATCGAT | 1 cut(s) | 1467 |
| CseI | GACGC | 2 cut(s) | 1371, 2876 |
| DraI | TTTAAA | 1 cut(s) | 1062 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2247 |
| Eam1104I | CTCTTC | 3 cut(s) | 579, 1075, 3200 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2247 |
| EarI | CTCTTC | 3 cut(s) | 579, 1075, 3200 |
| Ecl136II | GAGCTC | 1 cut(s) | 952 |
| Eco130I | CCWWGG | 3 cut(s) | 566, 1733, 2415 |
| Eco147I | AGGCCT | 1 cut(s) | 1960 |
| Eco24I | GRGCYC | 1 cut(s) | 954 |
| Eco31I | GGTCTC | 1 cut(s) | 1543 |
| Eco47I | GGWCC | 2 cut(s) | 822, 2794 |
| Eco53kI | GAGCTC | 1 cut(s) | 952 |
| Eco57I | CTGAAG | 2 cut(s) | 1022, 3246 |
| Eco72I | CACGTG | 1 cut(s) | 222 |
| Eco88I | CYCGRG | 1 cut(s) | 1082 |
| EcoICRI | GAGCTC | 1 cut(s) | 952 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 410 |
| EcoRII | CCWGG | 1 cut(s) | 207 |
| EcoT14I | CCWWGG | 3 cut(s) | 566, 1733, 2415 |
| EcoT22I | ATGCAT | 3 cut(s) | 59, 2484, 3316 |
| EcoT38I | GRGCYC | 1 cut(s) | 954 |
| ErhI | CCWWGG | 3 cut(s) | 566, 1733, 2415 |
| Esp3I | CGTCTC | 1 cut(s) | 1289 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2046, 2078, 2908, 2940 |
| FaqI | GGGAC | 2 cut(s) | 1685, 3387 |
| FauNDI | CATATG | 2 cut(s) | 203, 2484 |
| FblI | GTMKAC | 1 cut(s) | 1147 |
| Fnu4HI | GCNGC | 3 cut(s) | 147, 159, 168 |
| FokI | GGATG | 3 cut(s) | 1541, 2922, 3223 |
| FriOI | GRGCYC | 1 cut(s) | 954 |
| Fsp4HI | GCNGC | 3 cut(s) | 147, 159, 168 |
| GluI | GCNGC | 3 cut(s) | 147, 159, 168 |
| GsuI | CTGGAG | 1 cut(s) | 171 |
| HaeIII | GGCC | 2 cut(s) | 672, 1960 |
| HapII | CCGG | 1 cut(s) | 1904 |
| HgaI | GACGC | 2 cut(s) | 1371, 2876 |
| HincII | GTYRAC | 3 cut(s) | 1453, 2857, 3222 |
| HindII | GTYRAC | 3 cut(s) | 1453, 2857, 3222 |
| HindIII | AAGCTT | 2 cut(s) | 1256, 3228 |
| HpaI | GTTAAC | 1 cut(s) | 3222 |
| HpaII | CCGG | 1 cut(s) | 1904 |
| HphI | GGTGA | 3 cut(s) | 2063, 2372, 3065 |
| Hpy188I | TCNGA | 9 cut(s) | 962, 1041, 1416, 1927, 2098, 2235, 2389, 2646, 3106 |
| Hpy99I | CGWCG | 1 cut(s) | 1365 |
| HpyCH4III | ACNGT | 5 cut(s) | 115, 562, 1379, 2861, 2934 |
| HpyCH4IV | ACGT | 2 cut(s) | 221, 2176 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 155, 164, 167, 213, 931, 3093 |
| HpySE526I | ACGT | 2 cut(s) | 221, 2176 |
| KpnI | GGTACC | 2 cut(s) | 566, 1979 |
| KspAI | GTTAAC | 1 cut(s) | 3222 |
| LmnI | GCTCC | 2 cut(s) | 949, 1549 |
| Lsp1109I | GCAGC | 3 cut(s) | 133, 145, 154 |
| LweI | GCATC | 6 cut(s) | 44, 133, 1931, 1936, 3201, 3301 |
| MaeII | ACGT | 2 cut(s) | 221, 2176 |
| MaeIII | GTNAC | 5 cut(s) | 115, 224, 834, 1493, 2657 |
| MfeI | CAATTG | 1 cut(s) | 263 |
| MflI | RGATCY | 2 cut(s) | 1729, 2308 |
| MhlI | GDGCHC | 2 cut(s) | 763, 954 |
| MlyI | GAGTC | 7 cut(s) | 800, 1854, 1922, 2227, 2765, 3313, 3369 |
| MmeI | TCCRAC | 4 cut(s) | 119, 134, 1160, 2469 |
| Mph1103I | ATGCAT | 3 cut(s) | 59, 2484, 3316 |
| MroXI | GAANNNNTTC | 3 cut(s) | 507, 2116, 3386 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1791, 1793, 1895, 2483 |
| MspI | CCGG | 1 cut(s) | 1904 |
| MspR9I | CCNGG | 2 cut(s) | 209, 1905 |
| MunI | CAATTG | 1 cut(s) | 263 |
| Mva1269I | GAATGC | 4 cut(s) | 934, 2149, 2416, 2560 |
| MvaI | CCWGG | 1 cut(s) | 209 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 155, 164, 167, 213, 931, 3093 |
| NciI | CCSGG | 1 cut(s) | 1905 |
| NcoI | CCATGG | 1 cut(s) | 2415 |
| NdeI | CATATG | 2 cut(s) | 203, 2484 |
| NheI | GCTAGC | 1 cut(s) | 212 |
| NlaIV | GGNNCC | 5 cut(s) | 564, 1918, 1977, 2456, 3157 |
| NmuCI | GTSAC | 4 cut(s) | 115, 224, 1493, 2657 |
| NsiI | ATGCAT | 3 cut(s) | 59, 2484, 3316 |
| NspI | RCATGY | 4 cut(s) | 89, 656, 1355, 1802 |
| PagI | TCATGA | 1 cut(s) | 780 |
| PaqCI | CACCTGC | 2 cut(s) | 172, 1543 |
| PceI | AGGCCT | 1 cut(s) | 1960 |
| PciI | ACATGT | 2 cut(s) | 652, 1351 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2650 |
| PctI | GAATGC | 4 cut(s) | 934, 2149, 2416, 2560 |
| PdmI | GAANNNNTTC | 3 cut(s) | 507, 2116, 3386 |
| PfeI | GAWTC | 6 cut(s) | 1030, 1315, 1464, 1594, 1721, 2058 |
| PkrI | GCNGC | 3 cut(s) | 148, 160, 169 |
| PleI | GAGTC | 7 cut(s) | 799, 1853, 1922, 2226, 2764, 3313, 3369 |
| PmaCI | CACGTG | 1 cut(s) | 222 |
| PmlI | CACGTG | 1 cut(s) | 222 |
| PpsI | GAGTC | 7 cut(s) | 799, 1853, 1922, 2226, 2764, 3313, 3369 |
| Ppu21I | YACGTR | 1 cut(s) | 222 |
| PscI | ACATGT | 2 cut(s) | 652, 1351 |
| Psp124BI | GAGCTC | 1 cut(s) | 954 |
| Psp1406I | AACGTT | 1 cut(s) | 2176 |
| Psp6I | CCWGG | 1 cut(s) | 207 |
| PspCI | CACGTG | 1 cut(s) | 222 |
| PspGI | CCWGG | 1 cut(s) | 207 |
| PspN4I | GGNNCC | 5 cut(s) | 564, 1918, 1977, 2456, 3157 |
| PspPI | GGNCC | 2 cut(s) | 822, 2794 |
| PstI | CTGCAG | 2 cut(s) | 799, 987 |
| PsuI | RGATCY | 2 cut(s) | 1729, 2308 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1791, 1793, 1895, 2483 |
| SacI | GAGCTC | 1 cut(s) | 954 |
| SatI | GCNGC | 3 cut(s) | 147, 159, 168 |
| Sau96I | GGNCC | 2 cut(s) | 822, 2794 |
| SchI | GAGTC | 7 cut(s) | 800, 1854, 1922, 2227, 2765, 3313, 3369 |
| ScrFI | CCNGG | 2 cut(s) | 209, 1905 |
| SduI | GDGCHC | 2 cut(s) | 763, 954 |
| SfaNI | GCATC | 6 cut(s) | 44, 133, 1931, 1936, 3201, 3301 |
| SfcI | CTRYAG | 5 cut(s) | 795, 983, 1542, 1725, 2304 |
| SinI | GGWCC | 2 cut(s) | 822, 2794 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1791, 1793, 1895, 2483 |
| SmlI | CTYRAG | 3 cut(s) | 2562, 2627, 3377 |
| SmoI | CTYRAG | 3 cut(s) | 2562, 2627, 3377 |
| SseBI | AGGCCT | 1 cut(s) | 1960 |
| SsiI | CCGC | 3 cut(s) | 1920, 2262, 3420 |
| SspI | AATATT | 1 cut(s) | 2135 |
| SstI | GAGCTC | 1 cut(s) | 954 |
| StuI | AGGCCT | 1 cut(s) | 1960 |
| StyD4I | CCNGG | 2 cut(s) | 207, 1903 |
| StyI | CCWWGG | 3 cut(s) | 566, 1733, 2415 |
| TaaI | ACNGT | 5 cut(s) | 115, 562, 1379, 2861, 2934 |
| TaiI | ACGT | 2 cut(s) | 224, 2179 |
| TaqI | TCGA | 6 cut(s) | 938, 1028, 1249, 1467, 1843, 2251 |
| TatI | WGTACW | 2 cut(s) | 594, 1162 |
| TfiI | GAWTC | 6 cut(s) | 1030, 1315, 1464, 1594, 1721, 2058 |
| TscAI | CASTG | 4 cut(s) | 850, 2399, 2866, 2937 |
| TseFI | GTSAC | 4 cut(s) | 115, 224, 1493, 2657 |
| TseI | GCWGC | 3 cut(s) | 146, 158, 167 |
| Tsp45I | GTSAC | 4 cut(s) | 115, 224, 1493, 2657 |
| TspGWI | ACGGA | 3 cut(s) | 724, 1541, 2611 |
| TspRI | CASTG | 4 cut(s) | 850, 2399, 2866, 2937 |
| VneI | GTGCAC | 1 cut(s) | 759 |
| VpaK11BI | GGWCC | 2 cut(s) | 822, 2794 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 410 |
| XapI | RAATTY | 5 cut(s) | 20, 1156, 1668, 3142, 3185 |
| XbaI | TCTAGA | 1 cut(s) | 1931 |
| XceI | RCATGY | 4 cut(s) | 89, 656, 1355, 1802 |
| XmaJI | CCTAGG | 1 cut(s) | 1733 |
| XmiI | GTMKAC | 1 cut(s) | 1147 |
| XmnI | GAANNNNTTC | 3 cut(s) | 507, 2116, 3386 |
| Zsp2I | ATGCAT | 3 cut(s) | 59, 2484, 3316 |