DNA ligase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Myb_DNA-bind_3 | PF12776 | 17 - 114 | 1e-09 | Myb/SANT-like DNA-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 215 |
| AfaI | GTAC | 1 cut(s) | 142 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 417 |
| AflII | CTTAAG | 1 cut(s) | 233 |
| AflIII | ACRYGT | 1 cut(s) | 43 |
| AgsI | TTSAA | 6 cut(s) | 62, 79, 133, 226, 311, 626 |
| AjiI | CACGTC | 1 cut(s) | 44 |
| AluBI | AGCT | 2 cut(s) | 57, 407 |
| AluI | AGCT | 2 cut(s) | 57, 407 |
| Ama87I | CYCGRG | 1 cut(s) | 555 |
| ApeKI | GCWGC | 1 cut(s) | 346 |
| AspS9I | GGNCC | 2 cut(s) | 51, 451 |
| AsuHPI | GGTGA | 1 cut(s) | 23 |
| AvaI | CYCGRG | 1 cut(s) | 555 |
| AvaII | GGWCC | 2 cut(s) | 51, 451 |
| BbvCI | CCTCAGC | 1 cut(s) | 447 |
| BbvI | GCAGC | 1 cut(s) | 358 |
| BccI | CCATC | 2 cut(s) | 363, 419 |
| BceAI | ACGGC | 1 cut(s) | 139 |
| BciVI | GTATCC | 2 cut(s) | 328, 396 |
| BfaI | CTAG | 1 cut(s) | 404 |
| BfrI | CTTAAG | 1 cut(s) | 233 |
| BfuI | GTATCC | 2 cut(s) | 328, 396 |
| BisI | GCNGC | 1 cut(s) | 347 |
| BlsI | GCNGC | 1 cut(s) | 348 |
| Bme18I | GGWCC | 2 cut(s) | 51, 451 |
| BmeT110I | CYCGRG | 1 cut(s) | 555 |
| BmgBI | CACGTC | 1 cut(s) | 44 |
| BmgT120I | GGNCC | 2 cut(s) | 51, 451 |
| BmiI | GGNNCC | 1 cut(s) | 453 |
| BpmI | CTGGAG | 1 cut(s) | 123 |
| Bpu10I | CCTNAGC | 1 cut(s) | 447 |
| BsaAI | YACGTR | 1 cut(s) | 339 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 412, 442 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 417 |
| Bse1I | ACTGG | 1 cut(s) | 439 |
| BseGI | GGATG | 1 cut(s) | 374 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 417 |
| BseMII | CTCAG | 1 cut(s) | 438 |
| BseNI | ACTGG | 1 cut(s) | 439 |
| BseRI | GAGGAG | 1 cut(s) | 485 |
| BseXI | GCAGC | 1 cut(s) | 358 |
| Bsh1285I | CGRYCG | 1 cut(s) | 565 |
| BsiEI | CGRYCG | 1 cut(s) | 565 |
| BsiHKCI | CYCGRG | 1 cut(s) | 555 |
| BslFI | GGGAC | 3 cut(s) | 165, 437, 561 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 417 |
| BsmFI | GGGAC | 3 cut(s) | 165, 437, 561 |
| BsmI | GAATGC | 2 cut(s) | 166, 648 |
| BsoBI | CYCGRG | 1 cut(s) | 555 |
| BspCNI | CTCAG | 1 cut(s) | 439 |
| BspLI | GGNNCC | 1 cut(s) | 453 |
| BspTI | CTTAAG | 1 cut(s) | 233 |
| BsrI | ACTGG | 1 cut(s) | 439 |
| Bst4CI | ACNGT | 1 cut(s) | 428 |
| Bst6I | CTCTTC | 1 cut(s) | 60 |
| BstAFI | CTTAAG | 1 cut(s) | 233 |
| BstBAI | YACGTR | 1 cut(s) | 339 |
| BstC8I | GCNNGC | 2 cut(s) | 606, 648 |
| BstDEI | CTNAG | 1 cut(s) | 447 |
| BstF5I | GGATG | 1 cut(s) | 374 |
| BstMCI | CGRYCG | 1 cut(s) | 565 |
| BstSNI | TACGTA | 1 cut(s) | 339 |
| BstV1I | GCAGC | 1 cut(s) | 358 |
| BsuI | GTATCC | 2 cut(s) | 328, 396 |
| BtrI | CACGTC | 1 cut(s) | 44 |
| BtsCI | GGATG | 1 cut(s) | 374 |
| Cac8I | GCNNGC | 2 cut(s) | 606, 648 |
| Cfr13I | GGNCC | 2 cut(s) | 51, 451 |
| Csp6I | GTAC | 1 cut(s) | 141 |
| CviAII | CATG | 3 cut(s) | 262, 285, 523 |
| CviJI | RGCY | 4 cut(s) | 57, 407, 446, 519 |
| CviKI_1 | RGCY | 4 cut(s) | 57, 407, 446, 519 |
| CviQI | GTAC | 1 cut(s) | 141 |
| DdeI | CTNAG | 1 cut(s) | 447 |
| DraI | TTTAAA | 1 cut(s) | 168 |
| Eam1104I | CTCTTC | 1 cut(s) | 60 |
| EarI | CTCTTC | 1 cut(s) | 60 |
| Eco105I | TACGTA | 1 cut(s) | 339 |
| Eco32I | GATATC | 1 cut(s) | 295 |
| Eco47I | GGWCC | 2 cut(s) | 51, 451 |
| Eco57I | CTGAAG | 1 cut(s) | 215 |
| Eco88I | CYCGRG | 1 cut(s) | 555 |
| EcoO109I | RGGNCCY | 1 cut(s) | 451 |
| EcoRV | GATATC | 1 cut(s) | 295 |
| FaeI | CATG | 3 cut(s) | 265, 288, 526 |
| FaqI | GGGAC | 3 cut(s) | 165, 437, 561 |
| FatI | CATG | 3 cut(s) | 261, 284, 522 |
| Fnu4HI | GCNGC | 1 cut(s) | 347 |
| FokI | GGATG | 1 cut(s) | 381 |
| Fsp4HI | GCNGC | 1 cut(s) | 347 |
| FspBI | CTAG | 1 cut(s) | 404 |
| GluI | GCNGC | 1 cut(s) | 347 |
| GsuI | CTGGAG | 1 cut(s) | 123 |
| Hin1II | CATG | 3 cut(s) | 265, 288, 526 |
| HinfI | GANTC | 3 cut(s) | 68, 215, 629 |
| HphI | GGTGA | 1 cut(s) | 23 |
| Hpy166II | GTNNAC | 1 cut(s) | 206 |
| Hpy188I | TCNGA | 2 cut(s) | 195, 567 |
| Hpy188III | TCNNGA | 3 cut(s) | 39, 86, 633 |
| Hpy8I | GTNNAC | 1 cut(s) | 206 |
| HpyAV | CCTTC | 1 cut(s) | 190 |
| HpyCH4III | ACNGT | 1 cut(s) | 428 |
| HpyCH4IV | ACGT | 2 cut(s) | 43, 338 |
| HpyCH4V | TGCA | 5 cut(s) | 284, 306, 346, 608, 646 |
| HpyF3I | CTNAG | 1 cut(s) | 447 |
| HpySE526I | ACGT | 2 cut(s) | 43, 338 |
| Hsp92II | CATG | 3 cut(s) | 265, 288, 526 |
| LmnI | GCTCC | 1 cut(s) | 472 |
| LpnPI | CCDG | 6 cut(s) | 67, 87, 123, 420, 468, 618 |
| Lsp1109I | GCAGC | 1 cut(s) | 358 |
| MaeI | CTAG | 1 cut(s) | 404 |
| MaeII | ACGT | 2 cut(s) | 43, 338 |
| MaeIII | GTNAC | 2 cut(s) | 116, 422 |
| MboII | GAAGA | 6 cut(s) | 74, 77, 238, 500, 602, 638 |
| MluCI | AATT | 4 cut(s) | 93, 184, 597, 617 |
| MlyI | GAGTC | 2 cut(s) | 77, 224 |
| MmeI | TCCRAC | 2 cut(s) | 447, 545 |
| MnlI | CCTC | 5 cut(s) | 98, 442, 463, 525, 567 |
| MseI | TTAA | 3 cut(s) | 146, 167, 234 |
| MslI | CAYNNNNRTG | 1 cut(s) | 527 |
| MspCI | CTTAAG | 1 cut(s) | 233 |
| Mva1269I | GAATGC | 2 cut(s) | 166, 648 |
| NlaIII | CATG | 3 cut(s) | 265, 288, 526 |
| NlaIV | GGNNCC | 1 cut(s) | 453 |
| NmuCI | GTSAC | 2 cut(s) | 116, 422 |
| PctI | GAATGC | 2 cut(s) | 166, 648 |
| PfeI | GAWTC | 1 cut(s) | 629 |
| PkrI | GCNGC | 1 cut(s) | 348 |
| PleI | GAGTC | 2 cut(s) | 76, 223 |
| PpsI | GAGTC | 2 cut(s) | 76, 223 |
| Ppu21I | YACGTR | 1 cut(s) | 339 |
| PpuMI | RGGWCCY | 1 cut(s) | 451 |
| Psp5II | RGGWCCY | 1 cut(s) | 451 |
| PspN4I | GGNNCC | 1 cut(s) | 453 |
| PspPI | GGNCC | 2 cut(s) | 51, 451 |
| PspPPI | RGGWCCY | 1 cut(s) | 451 |
| RsaI | GTAC | 1 cut(s) | 142 |
| RsaNI | GTAC | 1 cut(s) | 141 |
| RseI | CAYNNNNRTG | 1 cut(s) | 527 |
| SaqAI | TTAA | 3 cut(s) | 146, 167, 234 |
| SatI | GCNGC | 1 cut(s) | 347 |
| Sau96I | GGNCC | 2 cut(s) | 51, 451 |
| SchI | GAGTC | 2 cut(s) | 77, 224 |
| SetI | ASST | 5 cut(s) | 46, 59, 341, 409, 453 |
| SinI | GGWCC | 2 cut(s) | 51, 451 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 527 |
| SmlI | CTYRAG | 1 cut(s) | 233 |
| SmoI | CTYRAG | 1 cut(s) | 233 |
| SnaBI | TACGTA | 1 cut(s) | 339 |
| Sse9I | AATT | 4 cut(s) | 93, 184, 597, 617 |
| SspMI | CTAG | 1 cut(s) | 404 |
| TaaI | ACNGT | 1 cut(s) | 428 |
| TaiI | ACGT | 2 cut(s) | 46, 341 |
| TaqII | GACCGA | 1 cut(s) | 551 |
| TasI | AATT | 4 cut(s) | 93, 184, 597, 617 |
| TfiI | GAWTC | 1 cut(s) | 629 |
| Tru1I | TTAA | 3 cut(s) | 146, 167, 234 |
| Tru9I | TTAA | 3 cut(s) | 146, 167, 234 |
| TseFI | GTSAC | 2 cut(s) | 116, 422 |
| TseI | GCWGC | 1 cut(s) | 346 |
| Tsp45I | GTSAC | 2 cut(s) | 116, 422 |
| TspDTI | ATGAA | 5 cut(s) | 30, 281, 339, 501, 603 |
| TspGWI | ACGGA | 1 cut(s) | 105 |
| Vha464I | CTTAAG | 1 cut(s) | 233 |
| VpaK11BI | GGWCC | 2 cut(s) | 51, 451 |
| XspI | CTAG | 1 cut(s) | 404 |