MD03G1019800.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
1541361 .. 1543790
2430 bp
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UTR
Exon/CDS
Intron
MD03G1019800.v1.1.491

Sequence Viewer

Length: 2430 bp
ATGGCAATGGCTTTTTCTGTGCGGATGCTTTTGTTCTCCTCATTGTTTTTGCTTCCAATTTCTGTGTTTTCCCAAAATAATGGAAGAGTAGCAGTTGGAAATTCTTTAACTGCAACTACAAGTAACTCCTCATCATGGCTTTCTCCATCCGGTGATTTCGCGTTTGGATTTTTGCCCCTTGGAGGCGATGATCTTTTCTTGCTTTCAATATGGTACGCCAAAATCCAAAACCAAACCGTAGTTTGGCATGCATATGAGGATAACAACCCCATAGTTGCACCTAAGGGATCCACTTTGAACATGAATGCCAGCAGTGGACTAGTTCTTAACGATCCTCACGGTATGGAGATATGGAAATCTGAAACAACTTTCGGGGTTGTTGCAAACGGGGTCATGAATGACACCGGAAACTTTGTTCTTCAAGACAAAAACTCGGGGAGCTTATGGGAGACCTTCAACAATCCTACAGACACCATTTTGCCTGGACAGACAATTGAGAGAAATGGGAAGCTTTCGTCTAGACAATCGGAGAGTAACTACACGAAGGGGCGGTTCCAGCTGCGCTTGCAAGATGATGGAAATCTCGTGCTCAACACCATAAACTTGCCAACAGATTTTGCCAACGAGCCTTACTTTGCCACGGACACAACAGCGGGGACTCTGGAAGGTAAACAATTGGTGTTCAACAACTCAGGGGACATGTTTGTTTTGAGAGAAAATGGTGGAACATTCATTCTCACATCGGCAGGAGTCTCCTGGGTGAGGGACAGCTACATAAGGGCAACCCTTGATTTTGATGGGATTTTCATGCTATACTCTTACCCGAAAAATTTCATTGGAATCGCAAGCTGGAGTCCCCTGTGGTATCAGCCGAATGATATTTGCCAAGCACTTATGGAAGACACGGGCGTTGGTGTTTGTGGATACAACAGTGTCTGTAAGATGAATCAAGATCATAGGCCAACCTGCGAATGCCCGAGAGGGTTTTCTTTTCTTGATCCCAAGGACTTATACCGAGGCTGTAAACCCGATTTTATACAAGGCTGTGAAGCAGATGAGGTACAAAGTCCCAGAAAAGATTTGTATGATGTCGAAATGCAGACAAATACTGATTGGCCAACCTCAGATTATATGCGGCTAAAACCTTTTACCGCGGAGAAGTGCAAAGAGTCTTGCTTTCAAGATTGTTTGTGCGCTGTTGCTGTTTTCAGGTCTGAAACCTGCTGGAAAAAGAAGTTACCTCTCTCAAACGGGAGAGTGCAGTTCAATCTTAGTTCACAGACCTTCATCAAAGTCCGAAAGGATAATGTAACTCTGCAGTTTCCTCCAATGCCAATTCCTCCTCCAATGCCAATTCCAGATGATAAAGAGAAGAGCAAGATCACTGTTATACGTGTGGGATCAGCACTATTAGGGACCTCCATATTTGTTAATGTTGCTGCTCTCTGTCTCGGTTTTTTCTTCATATTCCGGAAGAAACCAGTAAGATCTAGTACCGATATTGTTTTGGACTCGAATTTGCGCTCTTTTAGCTATGAAGAGCTACAAGAAGCTACAAATGGATTTACGGAAGAATTAGGAAAGGGTGCTTTTGGAGTGGTTTTCAAAGGGGCGATGCAAATTGGTTCTGGTGTCGAAGTGGCGGTGAAGAAGCTACGCTATGTTATGCAAGATGTCGAGAAGGAGTTTAAAACAGAACTGAATGTAATTGGTAAGACGCATCATAAGAATCTGGTTCGTCTTTTTGGATATTGTGATGAGGGGCAACAGAAATTGCTAGTTTATGAGTTCTTGAGCAATGGCACACTGGCAAGCTTTCTTTTTTCTGATATCAAACCAAGTTGGAAACAGCGAATTGAAATCGCTTATGGCATTGCGAAAGGGCTTTTGTACTTGCATGAAGAGTGCAGCACGCAGATTATCCATTGTGACATAAAGCCACAGAACATACTTCTCGATGATTATTACACTCCTCGGATTTCTGATTTTGGATTGGCAAAACTTTTGATGATGAATCAGAGCCAGACTCATACTGCTATCCGAGGAACAAAAGGTTATGTTGCACCTGAGTGGTTCAGGAACTTGCCAATCACTACCAAAGTTGATGTGTACAGCTTTGGTGTTGTGCTGCTGGAGATTATTTGTTGTAGGAGAAATGTTGACGTGGAAGGTAACTTGGAAGAGAGAGCAATTTTAACGGATTGGGTTTATGATTGCTACGTTGAAGGAGTATTAGATGCTGTTGTAGATCATGAAGTTGAGGCATTGGGTGATCGAGCGACACTGGAAAAGTTTGTGATGGTTGGGATTTGGTGCATTCAGGAAGATCCTTCTCTTAGGCCTACTATGAGGAGGGTTGTGCAGATGTTTGAAGCAGTTGTCGAAGTGCATGTTCCACCATGTCCATCTCCATATACCAGAGCAGGCTGA

Protein Analysis

810

Amino Acids

90.76

Weight (kDa)

5.37

Isoelectric Point (pI)

33.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 79 - 172 9.8e-14 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 522 - 789 4.4e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 523 - 788 1.2e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 974, 1229
AccII CGCG 2 cut(s) 161, 1154
AccIII TCCGGA 1 cut(s) 1470
AciI CCGC 7 cut(s) 22, 550, 653, 1135, 1152, 1154, 1643
AclWI GGATC 6 cut(s) 282, 295, 326, 992, 1408, 2321
AcoI YGGCCR 1 cut(s) 1115
AcsI RAATTY 3 cut(s) 100, 829, 1516
AfaI GTAC 5 cut(s) 215, 1062, 1495, 1892, 2111
AfiI CCNNNNNNNGG 4 cut(s) 135, 182, 243, 762
AflIII ACRYGT 2 cut(s) 699, 1393
AhlI ACTAGT 1 cut(s) 319
AjiI CACGTC 1 cut(s) 2164
AjnI CCWGG 2 cut(s) 481, 755
AleI CACNNNNGTG 1 cut(s) 2068
AloI GAACNNNNNNTCC 2 cut(s) 399, 431
Alw21I GWGCWC 1 cut(s) 591
Alw26I GTCTC 3 cut(s) 443, 757, 1454
AlwI GGATC 6 cut(s) 282, 295, 326, 992, 1408, 2321
AlwNI CAGNNNCTG 1 cut(s) 936
Ama87I CYCGRG 2 cut(s) 433, 976
Aor13HI TCCGGA 1 cut(s) 1470
AoxI GGCC 3 cut(s) 959, 1115, 2339
ApeKI GCWGC 4 cut(s) 559, 1439, 1908, 2128
ApoI RAATTY 3 cut(s) 100, 829, 1516
Asp700I GAANNNNTTC 1 cut(s) 830
AspLEI GCGC 3 cut(s) 564, 1196, 1524
AspS9I GGNCC 1 cut(s) 1416
AsuHPI GGTGA 4 cut(s) 164, 772, 1657, 2282
AvaI CYCGRG 2 cut(s) 433, 976
AvaII GGWCC 1 cut(s) 1416
AxyI CCTNAGG 1 cut(s) 282
BaeI ACNNNNGTAYC 2 cut(s) 916, 949
BalI TGGCCA 1 cut(s) 1117
BamHI GGATCC 1 cut(s) 287
BauI CACGAG 1 cut(s) 584
BbsI GAAGAC 1 cut(s) 906
Bbv12I GWGCWC 1 cut(s) 591
BbvI GCAGC 4 cut(s) 546, 1426, 1920, 2115
BccI CCATC 5 cut(s) 154, 569, 791, 2293, 2413
BciT130I CCWGG 2 cut(s) 483, 757
BciVI GTATCC 1 cut(s) 917
BcoDI GTCTC 3 cut(s) 443, 757, 1454
BcuI ACTAGT 1 cut(s) 319
BfaI CTAG 4 cut(s) 320, 519, 1491, 1778
BfmI CTRYAG 2 cut(s) 465, 1316
BfuAI ACCTGC 2 cut(s) 974, 1229
BfuI GTATCC 1 cut(s) 917
BglII AGATCT 1 cut(s) 1487
BisI GCNGC 5 cut(s) 560, 1136, 1440, 1909, 2129
BlsI GCNGC 5 cut(s) 561, 1137, 1441, 1910, 2130
Bme1390I CCNGG 2 cut(s) 483, 757
Bme18I GGWCC 1 cut(s) 1416
BmeT110I CYCGRG 2 cut(s) 433, 976
BmgBI CACGTC 1 cut(s) 2164
BmgT120I GGNCC 1 cut(s) 1416
BmiI GGNNCC 3 cut(s) 289, 554, 1417
BmrFI CCNGG 2 cut(s) 483, 757
BmsI GCATC 4 cut(s) 15, 1605, 1729, 2227
BpiI GAAGAC 1 cut(s) 906
BplI GAGNNNNNCTC 2 cut(s) 2011, 2043
BpmI CTGGAG 2 cut(s) 871, 2153
BpuEI CTTGAG 1 cut(s) 1813
BsaAI YACGTR 1 cut(s) 1394
BsaBI GATNNNNATC 1 cut(s) 579
BsaI GGTCTC 1 cut(s) 443
BsaJI CCNNGG 8 cut(s) 178, 639, 756, 1002, 1015, 1152, 1973, 2041
BsaWI WCCGGW 3 cut(s) 149, 404, 1470
Bsc4I CCNNNNNNNGG 4 cut(s) 135, 182, 243, 762
Bse1I ACTGG 3 cut(s) 1481, 1812, 2289
Bse21I CCTNAGG 1 cut(s) 282
Bse3DI GCAATG 3 cut(s) 12, 1804, 1872
Bse8I GATNNNNATC 1 cut(s) 579
BseAI TCCGGA 1 cut(s) 1470
BseBI CCWGG 2 cut(s) 483, 757
BseDI CCNNGG 8 cut(s) 178, 639, 756, 1002, 1015, 1152, 1973, 2041
BseGI GGATG 2 cut(s) 30, 146
BseJI GATNNNNATC 1 cut(s) 579
BseLI CCNNNNNNNGG 4 cut(s) 135, 182, 243, 762
BseMI GCAATG 3 cut(s) 12, 1804, 1872
BseMII CTCAG 3 cut(s) 705, 1137, 2058
BseNI ACTGG 3 cut(s) 1481, 1812, 2289
BseRI GAGGAG 5 cut(s) 28, 118, 1332, 1962, 2365
BseXI GCAGC 4 cut(s) 546, 1426, 1920, 2115
BsgI GTGCAG 3 cut(s) 1280, 1927, 2381
Bsh1236I CGCG 2 cut(s) 161, 1154
BshFI GGCC 3 cut(s) 961, 1117, 2341
BsiHKAI GWGCWC 1 cut(s) 591
BsiHKCI CYCGRG 2 cut(s) 433, 976
BsiSI CCGG 3 cut(s) 150, 405, 1471
BslFI GGGAC 6 cut(s) 670, 710, 779, 840, 1053, 1429
BslI CCNNNNNNNGG 4 cut(s) 135, 182, 243, 762
BsmAI GTCTC 3 cut(s) 443, 757, 1454
BsmFI GGGAC 6 cut(s) 670, 710, 779, 840, 1053, 1429
BsmI GAATGC 3 cut(s) 310, 977, 2316
BsnI GGCC 3 cut(s) 961, 1117, 2341
Bso31I GGTCTC 1 cut(s) 443
BsoBI CYCGRG 2 cut(s) 433, 976
Bsp1286I GDGCHC 1 cut(s) 591
Bsp13I TCCGGA 1 cut(s) 1470
Bsp1407I TGTACA 1 cut(s) 2109
BspACI CCGC 7 cut(s) 22, 550, 653, 1135, 1152, 1154, 1643
BspANI GGCC 3 cut(s) 961, 1117, 2341
BspCNI CTCAG 3 cut(s) 704, 1136, 2059
BspEI TCCGGA 1 cut(s) 1470
BspFNI CGCG 2 cut(s) 161, 1154
BspHI TCATGA 2 cut(s) 393, 2251
BspLI GGNNCC 3 cut(s) 289, 554, 1417
BspMAI CTGCAG 1 cut(s) 1320
BspMI ACCTGC 2 cut(s) 974, 1229
BspPI GGATC 6 cut(s) 282, 295, 326, 992, 1408, 2321
BspQI GCTCTTC 2 cut(s) 1367, 1533
BspTNI GGTCTC 1 cut(s) 443
BsrDI GCAATG 3 cut(s) 12, 1804, 1872
BsrGI TGTACA 1 cut(s) 2109
BsrI ACTGG 3 cut(s) 1481, 1812, 2289
BssECI CCNNGG 8 cut(s) 178, 639, 756, 1002, 1015, 1152, 1973, 2041
BssSI CACGAG 1 cut(s) 584
BssT1I CCWWGG 2 cut(s) 178, 1002
Bst2BI CACGAG 1 cut(s) 584
Bst2UI CCWGG 2 cut(s) 483, 757
Bst4CI ACNGT 4 cut(s) 238, 341, 932, 1387
Bst6I CTCTTC 5 cut(s) 79, 1367, 1533, 1896, 2175
BstAUI TGTACA 1 cut(s) 2109
BstBAI YACGTR 1 cut(s) 1394
BstC8I GCNNGC 7 cut(s) 249, 310, 566, 847, 1813, 1913, 2425
BstDEI CTNAG 6 cut(s) 282, 691, 1123, 1271, 2067, 2336
BstDSI CCRYGG 2 cut(s) 639, 1152
BstENI CCTNNNNNAGG 1 cut(s) 760
BstF5I GGATG 2 cut(s) 30, 146
BstFNI CGCG 2 cut(s) 161, 1154
BstHHI GCGC 3 cut(s) 564, 1196, 1524
BstMAI GTCTC 3 cut(s) 443, 757, 1454
BstMWI GCNNNNNNNGC 3 cut(s) 556, 565, 1530
BstNI CCWGG 2 cut(s) 483, 757
BstNSI RCATGY 3 cut(s) 251, 703, 2393
BstSCI CCNGG 2 cut(s) 481, 755
BstSFI CTRYAG 2 cut(s) 465, 1316
BstUI CGCG 2 cut(s) 161, 1154
BstV1I GCAGC 4 cut(s) 546, 1426, 1920, 2115
BstV2I GAAGAC 1 cut(s) 906
BstX2I RGATCY 3 cut(s) 287, 1487, 2326
BstXI CCANNNNNNTGG 1 cut(s) 80
BstYI RGATCY 3 cut(s) 287, 1487, 2326
Bsu36I CCTNAGG 1 cut(s) 282
BsuI GTATCC 1 cut(s) 917
BsuRI GGCC 3 cut(s) 961, 1117, 2341
BtgI CCRYGG 2 cut(s) 639, 1152
BtgZI GCGATG 2 cut(s) 201, 1628
BtrI CACGTC 1 cut(s) 2164
BtsCI GGATG 2 cut(s) 30, 146
BtsI GCAGTG 1 cut(s) 319
BtsIMutI CAGTG 5 cut(s) 319, 937, 1383, 1805, 2282
BveI ACCTGC 2 cut(s) 974, 1229
Cac8I GCNNGC 7 cut(s) 249, 310, 566, 847, 1813, 1913, 2425
CaiI CAGNNNCTG 1 cut(s) 936
CciI TCATGA 2 cut(s) 393, 2251
CfoI GCGC 3 cut(s) 564, 1196, 1524
Cfr13I GGNCC 1 cut(s) 1416
Cfr42I CCGCGG 1 cut(s) 1155
CseI GACGC 1 cut(s) 1726
Csp6I GTAC 5 cut(s) 214, 1061, 1494, 1891, 2110
CviQI GTAC 5 cut(s) 214, 1061, 1494, 1891, 2110
DdeI CTNAG 6 cut(s) 282, 691, 1123, 1271, 2067, 2336
DraI TTTAAA 1 cut(s) 1690
EaeI YGGCCR 1 cut(s) 1115
Eam1104I CTCTTC 5 cut(s) 79, 1367, 1533, 1896, 2175
EarI CTCTTC 5 cut(s) 79, 1367, 1533, 1896, 2175
Eco130I CCWWGG 2 cut(s) 178, 1002
Eco147I AGGCCT 1 cut(s) 2341
Eco31I GGTCTC 1 cut(s) 443
Eco32I GATATC 1 cut(s) 1831
Eco47I GGWCC 1 cut(s) 1416
Eco81I CCTNAGG 1 cut(s) 282
Eco88I CYCGRG 2 cut(s) 433, 976
EcoNI CCTNNNNNAGG 1 cut(s) 760
EcoO109I RGGNCCY 1 cut(s) 1416
EcoRII CCWGG 2 cut(s) 481, 755
EcoRV GATATC 1 cut(s) 1831
EcoT14I CCWWGG 2 cut(s) 178, 1002
EcoT22I ATGCAT 1 cut(s) 253
ErhI CCWWGG 2 cut(s) 178, 1002
FaqI GGGAC 6 cut(s) 670, 710, 779, 840, 1053, 1429
FauI CCCGC 1 cut(s) 646
FauNDI CATATG 1 cut(s) 253
Fnu4HI GCNGC 5 cut(s) 560, 1136, 1440, 1909, 2129
FokI GGATG 2 cut(s) 37, 133
Fsp4HI GCNGC 5 cut(s) 560, 1136, 1440, 1909, 2129
FspBI CTAG 4 cut(s) 320, 519, 1491, 1778
GlaI GCGC 3 cut(s) 563, 1195, 1523
GluI GCNGC 5 cut(s) 560, 1136, 1440, 1909, 2129
GsuI CTGGAG 2 cut(s) 871, 2153
HaeIII GGCC 3 cut(s) 961, 1117, 2341
HapII CCGG 3 cut(s) 150, 405, 1471
HgaI GACGC 1 cut(s) 1726
HhaI GCGC 3 cut(s) 564, 1196, 1524
Hin6I GCGC 3 cut(s) 562, 1194, 1522
HinP1I GCGC 3 cut(s) 562, 1194, 1522
HincII GTYRAC 1 cut(s) 2161
HindII GTYRAC 1 cut(s) 2161
HindIII AAGCTT 2 cut(s) 509, 1813
HpaII CCGG 3 cut(s) 150, 405, 1471
HphI GGTGA 4 cut(s) 164, 772, 1657, 2282
Hpy166II GTNNAC 6 cut(s) 317, 671, 1025, 1277, 2110, 2161
Hpy8I GTNNAC 6 cut(s) 317, 671, 1025, 1277, 2110, 2161
HpyAV CCTTC 8 cut(s) 463, 538, 659, 1294, 1675, 2162, 2219, 2340
HpyCH4III ACNGT 4 cut(s) 238, 341, 932, 1387
HpyCH4IV ACGT 3 cut(s) 1393, 2163, 2220
HpyF10VI GCNNNNNNNGC 3 cut(s) 556, 565, 1530
HpyF3I CTNAG 6 cut(s) 282, 691, 1123, 1271, 2067, 2336
HpySE526I ACGT 3 cut(s) 1393, 2163, 2220
HspAI GCGC 3 cut(s) 562, 1194, 1522
Kpn2I TCCGGA 1 cut(s) 1470
KspI CCGCGG 1 cut(s) 1155
LguI GCTCTTC 2 cut(s) 1367, 1533
LmnI GCTCC 1 cut(s) 438
Lsp1109I GCAGC 4 cut(s) 546, 1426, 1920, 2115
LweI GCATC 4 cut(s) 15, 1605, 1729, 2227
MaeI CTAG 4 cut(s) 320, 519, 1491, 1778
MaeII ACGT 3 cut(s) 1393, 2163, 2220
MaeIII GTNAC 6 cut(s) 122, 533, 1236, 1309, 1928, 2171
MfeI CAATTG 2 cut(s) 492, 674
MflI RGATCY 3 cut(s) 287, 1487, 2326
MhlI GDGCHC 1 cut(s) 591
MlsI TGGCCA 1 cut(s) 1117
MluNI TGGCCA 1 cut(s) 1117
MlyI GAGTC 6 cut(s) 652, 759, 862, 1178, 1505, 2020
MmeI TCCRAC 2 cut(s) 76, 1823
Mox20I TGGCCA 1 cut(s) 1117
Mph1103I ATGCAT 1 cut(s) 253
MroI TCCGGA 1 cut(s) 1470
MroXI GAANNNNTTC 1 cut(s) 830
MscI TGGCCA 1 cut(s) 1117
MseI TTAA 5 cut(s) 107, 327, 1431, 1689, 2195
MslI CAYNNNNRTG 2 cut(s) 252, 2068
Msp20I TGGCCA 1 cut(s) 1117
MspA1I CMGCKG 3 cut(s) 559, 653, 1154
MspI CCGG 3 cut(s) 150, 405, 1471
MspR9I CCNGG 2 cut(s) 483, 757
MunI CAATTG 2 cut(s) 492, 674
Mva1269I GAATGC 3 cut(s) 310, 977, 2316
MvaI CCWGG 2 cut(s) 483, 757
MvnI CGCG 2 cut(s) 161, 1154
MwoI GCNNNNNNNGC 3 cut(s) 556, 565, 1530
NdeI CATATG 1 cut(s) 253
NlaIV GGNNCC 3 cut(s) 289, 554, 1417
NmuCI GTSAC 1 cut(s) 1928
NsiI ATGCAT 1 cut(s) 253
NspI RCATGY 3 cut(s) 251, 703, 2393
OliI CACNNNNGTG 1 cut(s) 2068
PaeI GCATGC 1 cut(s) 251
PagI TCATGA 2 cut(s) 393, 2251
PceI AGGCCT 1 cut(s) 2341
PciI ACATGT 1 cut(s) 699
PciSI GCTCTTC 2 cut(s) 1367, 1533
PctI GAATGC 3 cut(s) 310, 977, 2316
PdmI GAANNNNTTC 1 cut(s) 830
PfeI GAWTC 4 cut(s) 840, 946, 1729, 2014
PkrI GCNGC 5 cut(s) 561, 1137, 1441, 1910, 2130
PleI GAGTC 6 cut(s) 652, 758, 861, 1177, 1505, 2020
PpsI GAGTC 6 cut(s) 652, 758, 861, 1177, 1505, 2020
Ppu21I YACGTR 1 cut(s) 1394
PpuMI RGGWCCY 1 cut(s) 1416
PscI ACATGT 1 cut(s) 699
Psp5II RGGWCCY 1 cut(s) 1416
Psp6I CCWGG 2 cut(s) 481, 755
PspGI CCWGG 2 cut(s) 481, 755
PspN4I GGNNCC 3 cut(s) 289, 554, 1417
PspPI GGNCC 1 cut(s) 1416
PspPPI RGGWCCY 1 cut(s) 1416
PstI CTGCAG 1 cut(s) 1320
PstNI CAGNNNCTG 1 cut(s) 936
PsuI RGATCY 3 cut(s) 287, 1487, 2326
PvuII CAGCTG 1 cut(s) 559
RsaI GTAC 5 cut(s) 215, 1062, 1495, 1892, 2111
RsaNI GTAC 5 cut(s) 214, 1061, 1494, 1891, 2110
RseI CAYNNNNRTG 2 cut(s) 252, 2068
SacII CCGCGG 1 cut(s) 1155
SapI GCTCTTC 2 cut(s) 1367, 1533
SaqAI TTAA 5 cut(s) 107, 327, 1431, 1689, 2195
SatI GCNGC 5 cut(s) 560, 1136, 1440, 1909, 2129
Sau96I GGNCC 1 cut(s) 1416
SchI GAGTC 6 cut(s) 652, 759, 862, 1178, 1505, 2020
ScrFI CCNGG 2 cut(s) 483, 757
SduI GDGCHC 1 cut(s) 591
SfaNI GCATC 4 cut(s) 15, 1605, 1729, 2227
SfcI CTRYAG 2 cut(s) 465, 1316
Sfr303I CCGCGG 1 cut(s) 1155
SgrBI CCGCGG 1 cut(s) 1155
SinI GGWCC 1 cut(s) 1416
SmiMI CAYNNNNRTG 2 cut(s) 252, 2068
SmlI CTYRAG 1 cut(s) 1792
SmoI CTYRAG 1 cut(s) 1792
SpeI ACTAGT 1 cut(s) 319
SphI GCATGC 1 cut(s) 251
SseBI AGGCCT 1 cut(s) 2341
SsiI CCGC 7 cut(s) 22, 550, 653, 1135, 1152, 1154, 1643
SspMI CTAG 4 cut(s) 320, 519, 1491, 1778
StuI AGGCCT 1 cut(s) 2341
StyD4I CCNGG 2 cut(s) 481, 755
StyI CCWWGG 2 cut(s) 178, 1002
TaaI ACNGT 4 cut(s) 238, 341, 932, 1387
TaiI ACGT 3 cut(s) 1396, 2166, 2223
TaqI TCGA 7 cut(s) 1092, 1514, 1635, 1677, 1956, 2275, 2382
TatI WGTACW 2 cut(s) 1890, 2109
TauI GCSGC 1 cut(s) 1138
TfiI GAWTC 4 cut(s) 840, 946, 1729, 2014
Tru1I TTAA 5 cut(s) 107, 327, 1431, 1689, 2195
Tru9I TTAA 5 cut(s) 107, 327, 1431, 1689, 2195
TscAI CASTG 5 cut(s) 319, 937, 1390, 1812, 2289
TseFI GTSAC 1 cut(s) 1928
TseI GCWGC 4 cut(s) 559, 1439, 1908, 2128
Tsp45I GTSAC 1 cut(s) 1928
TspGWI ACGGA 3 cut(s) 656, 1583, 2213
TspRI CASTG 5 cut(s) 319, 937, 1390, 1812, 2289
VpaK11BI GGWCC 1 cut(s) 1416
XagI CCTNNNNNAGG 1 cut(s) 760
XapI RAATTY 3 cut(s) 100, 829, 1516
XbaI TCTAGA 1 cut(s) 518
XceI RCATGY 3 cut(s) 251, 703, 2393
XmnI GAANNNNTTC 1 cut(s) 830
XspI CTAG 4 cut(s) 320, 519, 1491, 1778
Zsp2I ATGCAT 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.