RLG00000036794

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
84684734 .. 84685180
447 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036794

Sequence Viewer

Length: 447 bp
ATGGAAATTGCGCATGGTGTTGCCAAAGGGCTTCTGTATTTGCATGAAGAGTGTACCACGCAAATCATCCATTGTGATATAAAGCCTCAGAACATTCTTCATGATGATAATTACGTTGCTCATATCTCTGATTTCGGCTTGGCGAAACTTTTGATGACGAATCATAGCCAGACGCATACTGCCATTAGAGGAACAAAAGGGTATGTTGCACCTGAGTGGTTTAGGAACATGGCAATCACTACCAAAGTTGATGTGTATAGCTTTGGCGTTGTGCTGCTAGAGATCATTTGCTGCATGAGAAGTGTTGATATGGAAAATAACTGTGAAGAGAAAGCAATTTTGACTGATTGGGTTTGTGATTGCTACAGAGAGGGAGTGTTAGAGACTGTTCTAGATCACAAAGTCGACGCCTTGGAAGGTGAAATGAAGCTGAAGAGACTGTCATGA

Protein Analysis

149

Amino Acids

16.83

Weight (kDa)

5.39

Isoelectric Point (pI)

30.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 2 - 99 4.4e-21 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 3 - 106 2.3e-26 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 12
AccI GTMKAC 1 cut(s) 405
AcyI GRCGYC 1 cut(s) 408
AfaI GTAC 1 cut(s) 55
AleI CACNNNNGTG 1 cut(s) 214
AluBI AGCT 2 cut(s) 261, 430
AluI AGCT 2 cut(s) 261, 430
Alw26I GTCTC 2 cut(s) 377, 430
ApeKI GCWGC 2 cut(s) 274, 291
AspLEI GCGC 1 cut(s) 13
AsuHPI GGTGA 1 cut(s) 431
BbvI GCAGC 2 cut(s) 261, 278
BcoDI GTCTC 2 cut(s) 377, 430
BfaI CTAG 2 cut(s) 278, 392
BfmI CTRYAG 1 cut(s) 364
BisI GCNGC 2 cut(s) 275, 292
BlsI GCNGC 2 cut(s) 276, 293
BsaHI GRCGYC 1 cut(s) 408
BsaJI CCNNGG 1 cut(s) 411
BseDI CCNNGG 1 cut(s) 411
BseGI GGATG 1 cut(s) 66
BseMII CTCAG 2 cut(s) 101, 204
BseXI GCAGC 2 cut(s) 261, 278
BsmAI GTCTC 2 cut(s) 377, 430
Bsp143I GATC 2 cut(s) 282, 394
BspCNI CTCAG 2 cut(s) 100, 205
BspHI TCATGA 2 cut(s) 100, 443
BssECI CCNNGG 1 cut(s) 411
BssMI GATC 2 cut(s) 282, 394
BssNI GRCGYC 1 cut(s) 408
BssT1I CCWWGG 1 cut(s) 411
Bst4CI ACNGT 3 cut(s) 323, 388, 441
Bst6I CTCTTC 3 cut(s) 42, 321, 428
BstACI GRCGYC 1 cut(s) 408
BstDEI CTNAG 2 cut(s) 87, 213
BstF5I GGATG 1 cut(s) 66
BstHHI GCGC 1 cut(s) 13
BstKTI GATC 2 cut(s) 285, 397
BstMAI GTCTC 2 cut(s) 377, 430
BstMBI GATC 2 cut(s) 282, 394
BstSFI CTRYAG 1 cut(s) 364
BstV1I GCAGC 2 cut(s) 261, 278
BtsCI GGATG 1 cut(s) 66
CciI TCATGA 2 cut(s) 100, 443
CfoI GCGC 1 cut(s) 13
CseI GACGC 2 cut(s) 181, 416
Csp6I GTAC 1 cut(s) 54
CviAII CATG 6 cut(s) 14, 44, 101, 229, 295, 444
CviJI RGCY 6 cut(s) 31, 85, 138, 168, 261, 430
CviKI_1 RGCY 6 cut(s) 31, 85, 138, 168, 261, 430
CviQI GTAC 1 cut(s) 54
DdeI CTNAG 2 cut(s) 87, 213
DpnI GATC 2 cut(s) 284, 396
DpnII GATC 2 cut(s) 282, 394
Eam1104I CTCTTC 3 cut(s) 42, 321, 428
EarI CTCTTC 3 cut(s) 42, 321, 428
Eco130I CCWWGG 1 cut(s) 411
EcoT14I CCWWGG 1 cut(s) 411
ErhI CCWWGG 1 cut(s) 411
FaeI CATG 6 cut(s) 17, 47, 104, 232, 298, 447
FatI CATG 6 cut(s) 13, 43, 100, 228, 294, 443
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 2 cut(s) 275, 292
FokI GGATG 1 cut(s) 53
Fsp4HI GCNGC 2 cut(s) 275, 292
FspBI CTAG 2 cut(s) 278, 392
FspI TGCGCA 1 cut(s) 12
GlaI GCGC 1 cut(s) 12
GluI GCNGC 2 cut(s) 275, 292
HgaI GACGC 2 cut(s) 181, 416
HhaI GCGC 1 cut(s) 13
Hin1I GRCGYC 1 cut(s) 408
Hin1II CATG 6 cut(s) 17, 47, 104, 232, 298, 447
Hin6I GCGC 1 cut(s) 11
HinP1I GCGC 1 cut(s) 11
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HinfI GANTC 1 cut(s) 160
HphI GGTGA 1 cut(s) 431
Hpy166II GTNNAC 2 cut(s) 54, 406
Hpy188I TCNGA 2 cut(s) 90, 130
Hpy188III TCNNGA 3 cut(s) 101, 392, 444
Hpy8I GTNNAC 2 cut(s) 54, 406
Hpy99I CGWCG 1 cut(s) 410
HpyAV CCTTC 1 cut(s) 410
HpyCH4III ACNGT 3 cut(s) 323, 388, 441
HpyCH4IV ACGT 1 cut(s) 114
HpyCH4V TGCA 3 cut(s) 43, 209, 294
HpyF3I CTNAG 2 cut(s) 87, 213
HpySE526I ACGT 1 cut(s) 114
Hsp92I GRCGYC 1 cut(s) 408
Hsp92II CATG 6 cut(s) 17, 47, 104, 232, 298, 447
HspAI GCGC 1 cut(s) 11
Kzo9I GATC 2 cut(s) 282, 394
LpnPI CCDG 2 cut(s) 182, 225
Lsp1109I GCAGC 2 cut(s) 261, 278
MaeI CTAG 2 cut(s) 278, 392
MaeII ACGT 1 cut(s) 114
MalI GATC 2 cut(s) 284, 396
MboI GATC 2 cut(s) 282, 394
MboII GAAGA 4 cut(s) 59, 89, 338, 445
MluCI AATT 3 cut(s) 6, 109, 336
MnlI CCTC 3 cut(s) 96, 182, 364
MslI CAYNNNNRTG 1 cut(s) 214
NdeII GATC 2 cut(s) 282, 394
NlaIII CATG 6 cut(s) 17, 47, 104, 232, 298, 447
NsbI TGCGCA 1 cut(s) 12
OliI CACNNNNGTG 1 cut(s) 214
PagI TCATGA 2 cut(s) 100, 443
PfeI GAWTC 1 cut(s) 160
PkrI GCNGC 2 cut(s) 276, 293
RsaI GTAC 1 cut(s) 55
RsaNI GTAC 1 cut(s) 54
RseI CAYNNNNRTG 1 cut(s) 214
SalI GTCGAC 1 cut(s) 404
SatI GCNGC 2 cut(s) 275, 292
Sau3AI GATC 2 cut(s) 282, 394
SetI ASST 5 cut(s) 117, 214, 263, 421, 432
SfcI CTRYAG 1 cut(s) 364
SmiMI CAYNNNNRTG 1 cut(s) 214
Sse9I AATT 3 cut(s) 6, 109, 336
SspMI CTAG 2 cut(s) 278, 392
StyI CCWWGG 1 cut(s) 411
TaaI ACNGT 3 cut(s) 323, 388, 441
TaiI ACGT 1 cut(s) 117
TaqI TCGA 1 cut(s) 405
TasI AATT 3 cut(s) 6, 109, 336
TfiI GAWTC 1 cut(s) 160
TseI GCWGC 2 cut(s) 274, 291
TspDTI ATGAA 3 cut(s) 60, 89, 440
XbaI TCTAGA 1 cut(s) 391
XmiI GTMKAC 1 cut(s) 405
XspI CTAG 2 cut(s) 278, 392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.