RLG00000036790

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
84640036 .. 84641655
1620 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036790

Sequence Viewer

Length: 1089 bp
ATGAAATCTCTCAAAGAGGGTGTTTCATCGTCTCTTCAATTTTCATCAGGGGTGGAGGTGCAATGTCTTAGAAGTTTGAGAGGCATTTCAAAGGTCAATGACTGGCAAGAAGATGCCTGTAGAGACGCCCTCATAGTGACATCCGCATACTTAAACTCTTGGCTCTTGGCAGCTTGTTTTTGTCGAAACAGAACCATAGTTTGGTATGCAAATGGAGATAGGCCTGCACCTAAGGGATCAATTGTGAACTTGACTTCCAGCAGTGGATTAGTGCTTACAACTCCTCAGGGTGAACAGCTATGGAAATCTGATGGAACCATTGCTGGCTTTGTTGCTCATGGGGTTATGAATGATAAAGGTAACTTTGTTCTGGAAGATGAGAAGTCAGAAAAGTTATGGGAGACATTCAAGAATCCTACTGATACCATGTTACCTGGGCAAATATTAGAAAGAGGAGGGAGACTTTCTTCTCGACAATCAGAGACTAACTATGCGAGAGGACGCTTTCAGATAGATTTTCAAGAAGATGGGAATCTTGTGTTTAGTGCCAAAAAAACCTTTTTATTCTACTGCAACTACCAAGGGGACTGTTCCAGATTCACTTTCACAGCAGAGGAACGCCTAGCAAGGGACTACTATCTCCGGTCAACTCTCAACTTTGATGGGGTTTTGGCTCAATATTTTCTCCCAAAGTCTTTTGTTGACACTATCAAAGGCCAACCTTTGCTTGATCCAAGTGACCCGTACGGGAGCTGCAATCCAAATTTCGGGCATGGCTGTGAAGATGAGCCTGGTTTTTCAAAAGATCTATATGATGTTCAGGTGCTGCCAAATTCTGATTGGCTTACCCCCGGTTATGAGCTGTTAAATGCTTCTCCTGCAGACAAATGCAGTCAATATTGCAAGCAAGATTGTTTGTGTGATGTTGCTATCTACCACAATGAAACCTGTTGGAAAAAGAAATTACCTCTCTCATATGGGAGAGAAGACAGTAGTCTGAATGCAAAGACCTTCATCAAATTCAGGAAGGATAATTCAACTCTACCTGTTTGGTTTTTGTTGCAGGCAAAGATTGACAGACAGTGTTAG

Protein Analysis

363

Amino Acids

40.86

Weight (kDa)

5.79

Isoelectric Point (pI)

41.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 65 - 150 4.1e-14 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 201
AciI CCGC 1 cut(s) 144
AclWI GGATC 2 cut(s) 244, 725
AcsI RAATTY 3 cut(s) 763, 832, 1019
AcyI GRCGYC 1 cut(s) 126
AfaI GTAC 1 cut(s) 746
AfiI CCNNNNNNNGG 3 cut(s) 201, 628, 767
AgsI TTSAA 6 cut(s) 38, 90, 409, 521, 801, 1038
AjnI CCWGG 2 cut(s) 433, 790
AjuI GAANNNNNNNTTGG 2 cut(s) 184, 216
AloI GAACNNNNNNTCC 2 cut(s) 239, 271
AluBI AGCT 4 cut(s) 173, 298, 753, 862
AluI AGCT 4 cut(s) 173, 298, 753, 862
Alw26I GTCTC 5 cut(s) 36, 117, 395, 454, 476
AlwI GGATC 2 cut(s) 244, 725
AlwNI CAGNNNCTG 1 cut(s) 826
AoxI GGCC 2 cut(s) 221, 715
ApeKI GCWGC 3 cut(s) 170, 753, 826
ApoI RAATTY 3 cut(s) 763, 832, 1019
AsuC2I CCSGG 1 cut(s) 852
AsuHPI GGTGA 1 cut(s) 302
AxyI CCTNAGG 2 cut(s) 231, 285
BbsI GAAGAC 1 cut(s) 993
BbvI GCAGC 3 cut(s) 182, 740, 813
BccI CCATC 3 cut(s) 305, 521, 656
BciT130I CCWGG 2 cut(s) 435, 792
BcnI CCSGG 1 cut(s) 852
BcoDI GTCTC 5 cut(s) 36, 117, 395, 454, 476
BfaI CTAG 1 cut(s) 623
BfmI CTRYAG 2 cut(s) 118, 879
BglII AGATCT 1 cut(s) 805
BisI GCNGC 3 cut(s) 171, 754, 827
BlsI GCNGC 3 cut(s) 172, 755, 828
Bme1390I CCNGG 3 cut(s) 435, 792, 852
BmiI GGNNCC 1 cut(s) 316
BmrFI CCNGG 3 cut(s) 435, 792, 852
BmsI GCATC 1 cut(s) 103
BoxI GACNNNNGTC 1 cut(s) 993
BpiI GAAGAC 1 cut(s) 993
BplI GAGNNNNNCTC 2 cut(s) 114, 146
BpuMI CCSGG 1 cut(s) 852
BsaBI GATNNNNATC 1 cut(s) 531
BsaHI GRCGYC 1 cut(s) 126
BsaJI CCNNGG 3 cut(s) 434, 580, 850
BsaWI WCCGGW 1 cut(s) 642
Bsc4I CCNNNNNNNGG 3 cut(s) 201, 628, 767
Bse1I ACTGG 1 cut(s) 107
Bse21I CCTNAGG 2 cut(s) 231, 285
Bse3DI GCAATG 2 cut(s) 68, 318
Bse8I GATNNNNATC 1 cut(s) 531
BseBI CCWGG 2 cut(s) 435, 792
BseDI CCNNGG 3 cut(s) 434, 580, 850
BseGI GGATG 1 cut(s) 140
BseJI GATNNNNATC 1 cut(s) 531
BseLI CCNNNNNNNGG 3 cut(s) 201, 628, 767
BseMI GCAATG 2 cut(s) 68, 318
BseMII CTCAG 1 cut(s) 299
BseNI ACTGG 1 cut(s) 107
BseRI GAGGAG 2 cut(s) 273, 468
BseXI GCAGC 3 cut(s) 182, 740, 813
BsgI GTGCAG 1 cut(s) 210
BshFI GGCC 2 cut(s) 223, 717
BsiSI CCGG 2 cut(s) 643, 852
BsiWI CGTACG 1 cut(s) 744
BslFI GGGAC 2 cut(s) 599, 644
BslI CCNNNNNNNGG 3 cut(s) 201, 628, 767
BsmAI GTCTC 5 cut(s) 36, 117, 395, 454, 476
BsmBI CGTCTC 2 cut(s) 36, 117
BsmFI GGGAC 2 cut(s) 599, 644
BsmI GAATGC 1 cut(s) 1006
BsnI GGCC 2 cut(s) 223, 717
Bsp143I GATC 3 cut(s) 236, 730, 805
BspACI CCGC 1 cut(s) 144
BspANI GGCC 2 cut(s) 223, 717
BspCNI CTCAG 1 cut(s) 298
BspLI GGNNCC 1 cut(s) 316
BspMAI CTGCAG 1 cut(s) 883
BspPI GGATC 2 cut(s) 244, 725
BsrDI GCAATG 2 cut(s) 68, 318
BsrI ACTGG 1 cut(s) 107
BssECI CCNNGG 3 cut(s) 434, 580, 850
BssMI GATC 3 cut(s) 236, 730, 805
BssNI GRCGYC 1 cut(s) 126
BssT1I CCWWGG 1 cut(s) 580
Bst2UI CCWGG 2 cut(s) 435, 792
Bst4CI ACNGT 3 cut(s) 590, 992, 1083
Bst6I CTCTTC 1 cut(s) 39
BstACI GRCGYC 1 cut(s) 126
BstC8I GCNNGC 4 cut(s) 225, 325, 905, 1065
BstDEI CTNAG 3 cut(s) 68, 231, 285
BstF5I GGATG 1 cut(s) 140
BstKTI GATC 3 cut(s) 239, 733, 808
BstMAI GTCTC 5 cut(s) 36, 117, 395, 454, 476
BstMBI GATC 3 cut(s) 236, 730, 805
BstMWI GCNNNNNNNGC 1 cut(s) 878
BstNI CCWGG 2 cut(s) 435, 792
BstPAI GACNNNNGTC 1 cut(s) 993
BstSCI CCNGG 3 cut(s) 433, 790, 850
BstSFI CTRYAG 2 cut(s) 118, 879
BstV1I GCAGC 3 cut(s) 182, 740, 813
BstV2I GAAGAC 1 cut(s) 993
BstX2I RGATCY 1 cut(s) 805
BstYI RGATCY 1 cut(s) 805
Bsu36I CCTNAGG 2 cut(s) 231, 285
BsuRI GGCC 2 cut(s) 223, 717
BtsCI GGATG 1 cut(s) 140
BtsI GCAGTG 1 cut(s) 268
BtsIMutI CAGTG 2 cut(s) 268, 1088
Cac8I GCNNGC 4 cut(s) 225, 325, 905, 1065
CaiI CAGNNNCTG 1 cut(s) 826
CseI GACGC 2 cut(s) 134, 510
Csp6I GTAC 1 cut(s) 745
CviAII CATG 3 cut(s) 338, 427, 773
CviQI GTAC 1 cut(s) 745
DdeI CTNAG 3 cut(s) 68, 231, 285
DpnI GATC 3 cut(s) 238, 732, 807
DpnII GATC 3 cut(s) 236, 730, 805
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
Eco130I CCWWGG 1 cut(s) 580
Eco147I AGGCCT 1 cut(s) 223
Eco81I CCTNAGG 2 cut(s) 231, 285
EcoRII CCWGG 2 cut(s) 433, 790
EcoT14I CCWWGG 1 cut(s) 580
ErhI CCWWGG 1 cut(s) 580
Esp3I CGTCTC 2 cut(s) 36, 117
FaeI CATG 3 cut(s) 341, 430, 776
FaqI GGGAC 2 cut(s) 599, 644
FatI CATG 3 cut(s) 337, 426, 772
FauNDI CATATG 1 cut(s) 976
Fnu4HI GCNGC 3 cut(s) 171, 754, 827
FokI GGATG 1 cut(s) 127
Fsp4HI GCNGC 3 cut(s) 171, 754, 827
FspBI CTAG 1 cut(s) 623
GluI GCNGC 3 cut(s) 171, 754, 827
HaeIII GGCC 2 cut(s) 223, 717
HapII CCGG 2 cut(s) 643, 852
HgaI GACGC 2 cut(s) 134, 510
Hin1I GRCGYC 1 cut(s) 126
Hin1II CATG 3 cut(s) 341, 430, 776
HincII GTYRAC 2 cut(s) 648, 703
HindII GTYRAC 2 cut(s) 648, 703
HinfI GANTC 3 cut(s) 412, 532, 597
HpaII CCGG 2 cut(s) 643, 852
HphI GGTGA 1 cut(s) 302
Hpy166II GTNNAC 4 cut(s) 247, 293, 648, 703
Hpy188I TCNGA 6 cut(s) 310, 388, 481, 510, 838, 999
Hpy188III TCNNGA 6 cut(s) 371, 409, 471, 521, 594, 1024
Hpy8I GTNNAC 4 cut(s) 247, 293, 648, 703
HpyAV CCTTC 2 cut(s) 1021, 1021
HpyCH4III ACNGT 3 cut(s) 590, 992, 1083
HpyF10VI GCNNNNNNNGC 1 cut(s) 878
HpyF3I CTNAG 3 cut(s) 68, 231, 285
Hsp92I GRCGYC 1 cut(s) 126
Hsp92II CATG 3 cut(s) 341, 430, 776
Kzo9I GATC 3 cut(s) 236, 730, 805
LmnI GCTCC 1 cut(s) 750
Lsp1109I GCAGC 3 cut(s) 182, 740, 813
LweI GCATC 1 cut(s) 103
MaeI CTAG 1 cut(s) 623
MaeIII GTNAC 4 cut(s) 136, 359, 429, 737
MalI GATC 3 cut(s) 238, 732, 807
MboI GATC 3 cut(s) 236, 730, 805
MboII GAAGA 7 cut(s) 26, 122, 386, 459, 536, 794, 998
MfeI CAATTG 1 cut(s) 240
MflI RGATCY 1 cut(s) 805
MluCI AATT 7 cut(s) 38, 240, 763, 832, 962, 1019, 1033
MmeI TCCRAC 1 cut(s) 932
MseI TTAA 2 cut(s) 152, 866
MslI CAYNNNNRTG 1 cut(s) 777
MspI CCGG 2 cut(s) 643, 852
MspR9I CCNGG 3 cut(s) 435, 792, 852
MunI CAATTG 1 cut(s) 240
Mva1269I GAATGC 1 cut(s) 1006
MvaI CCWGG 2 cut(s) 435, 792
MwoI GCNNNNNNNGC 1 cut(s) 878
NciI CCSGG 1 cut(s) 852
NdeI CATATG 1 cut(s) 976
NdeII GATC 3 cut(s) 236, 730, 805
NlaIII CATG 3 cut(s) 341, 430, 776
NlaIV GGNNCC 1 cut(s) 316
NmuCI GTSAC 2 cut(s) 136, 737
PceI AGGCCT 1 cut(s) 223
PctI GAATGC 1 cut(s) 1006
PfeI GAWTC 3 cut(s) 412, 532, 597
Pfl23II CGTACG 1 cut(s) 744
PflMI CCANNNNNTGG 1 cut(s) 201
PkrI GCNGC 3 cut(s) 172, 755, 828
PshAI GACNNNNGTC 1 cut(s) 993
Psp6I CCWGG 2 cut(s) 433, 790
PspGI CCWGG 2 cut(s) 433, 790
PspLI CGTACG 1 cut(s) 744
PspN4I GGNNCC 1 cut(s) 316
PstI CTGCAG 1 cut(s) 883
PstNI CAGNNNCTG 1 cut(s) 826
PsuI RGATCY 1 cut(s) 805
RsaI GTAC 1 cut(s) 746
RsaNI GTAC 1 cut(s) 745
RseI CAYNNNNRTG 1 cut(s) 777
SaqAI TTAA 2 cut(s) 152, 866
SatI GCNGC 3 cut(s) 171, 754, 827
Sau3AI GATC 3 cut(s) 236, 730, 805
ScrFI CCNGG 3 cut(s) 435, 792, 852
SfaNI GCATC 1 cut(s) 103
SfcI CTRYAG 2 cut(s) 118, 879
SmiMI CAYNNNNRTG 1 cut(s) 777
Sse9I AATT 7 cut(s) 38, 240, 763, 832, 962, 1019, 1033
SseBI AGGCCT 1 cut(s) 223
SsiI CCGC 1 cut(s) 144
SspI AATATT 3 cut(s) 444, 680, 899
SspMI CTAG 1 cut(s) 623
StuI AGGCCT 1 cut(s) 223
StyD4I CCNGG 3 cut(s) 433, 790, 850
StyI CCWWGG 1 cut(s) 580
TaaI ACNGT 3 cut(s) 590, 992, 1083
TaqI TCGA 2 cut(s) 184, 472
TasI AATT 7 cut(s) 38, 240, 763, 832, 962, 1019, 1033
TfiI GAWTC 3 cut(s) 412, 532, 597
Tru1I TTAA 2 cut(s) 152, 866
Tru9I TTAA 2 cut(s) 152, 866
TscAI CASTG 2 cut(s) 268, 1088
TseFI GTSAC 2 cut(s) 136, 737
TseI GCWGC 3 cut(s) 170, 753, 826
Tsp45I GTSAC 2 cut(s) 136, 737
TspDTI ATGAA 6 cut(s) 15, 17, 33, 362, 957, 1003
TspRI CASTG 2 cut(s) 268, 1088
Van91I CCANNNNNTGG 1 cut(s) 201
XapI RAATTY 3 cut(s) 763, 832, 1019
XcmI CCANNNNNNNNNTGG 1 cut(s) 837
XspI CTAG 1 cut(s) 623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.