RLG00000001266

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
13182770 .. 13187293
4524 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001266

Sequence Viewer

Length: 396 bp
ATGCACTACATCGACAAGATGGAGAAGTACGTGATGATCGCATTGTGGTGTATTCATGAGGATCCATCATTGAGACCCACCGCCAAGAAACTCGCCCTGATGCTCGAAGGAACTCTTCAACAAGTTGACTTGGAGTCTTTAGCTGTTGAATTAGAAGAGGAGAACAAGCGGCTTTTGAAAGAGAAGGAAGGTTTAAAAGAGTGTAATGAGTCACAGGAGAACCCACCATCTGCAAATTCCATAAGGGATGATGCGCTTGCAAGAGTTTTAGGACCTGAAACTCGTGGAGGAGTTCGTGGGCTTGGGTTTGGTGCTACACCATCTCGAGTCAATGCTACTATTCAAGGCAGTGCAAAGGCTAAAGAACTTGAAGCTACTGTATTAAGTCAATCATAG

Protein Analysis

132

Amino Acids

14.43

Weight (kDa)

5.28

Isoelectric Point (pI)

57.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 81, 169
AclWI GGATC 2 cut(s) 56, 69
AcsI RAATTY 1 cut(s) 235
AfaI GTAC 1 cut(s) 29
AgsI TTSAA 5 cut(s) 119, 149, 178, 344, 371
AhdI GACNNNNNGTC 1 cut(s) 133
AluBI AGCT 2 cut(s) 143, 374
AluI AGCT 2 cut(s) 143, 374
Alw26I GTCTC 1 cut(s) 67
AlwI GGATC 2 cut(s) 56, 69
Ama87I CYCGRG 1 cut(s) 324
ApoI RAATTY 1 cut(s) 235
AspLEI GCGC 1 cut(s) 256
AspS9I GGNCC 1 cut(s) 272
AvaI CYCGRG 1 cut(s) 324
AvaII GGWCC 1 cut(s) 272
BamHI GGATCC 1 cut(s) 61
BauI CACGAG 1 cut(s) 282
BccI CCATC 4 cut(s) 13, 73, 235, 328
BcoDI GTCTC 1 cut(s) 67
BisI GCNGC 1 cut(s) 170
BlsI GCNGC 1 cut(s) 171
Bme18I GGWCC 1 cut(s) 272
BmeRI GACNNNNNGTC 1 cut(s) 133
BmeT110I CYCGRG 1 cut(s) 324
BmgT120I GGNCC 1 cut(s) 272
BmiI GGNNCC 1 cut(s) 63
BmsI GCATC 2 cut(s) 90, 241
BsaAI YACGTR 1 cut(s) 31
BsaI GGTCTC 1 cut(s) 67
BseGI GGATG 1 cut(s) 253
BseRI GAGGAG 2 cut(s) 173, 303
BsiHKCI CYCGRG 1 cut(s) 324
BsmAI GTCTC 1 cut(s) 67
Bso31I GGTCTC 1 cut(s) 67
BsoBI CYCGRG 1 cut(s) 324
Bsp143I GATC 2 cut(s) 36, 61
BspACI CCGC 2 cut(s) 81, 169
BspHI TCATGA 1 cut(s) 55
BspLI GGNNCC 1 cut(s) 63
BspPI GGATC 2 cut(s) 56, 69
BspTNI GGTCTC 1 cut(s) 67
BssMI GATC 2 cut(s) 36, 61
BssSI CACGAG 1 cut(s) 282
Bst2BI CACGAG 1 cut(s) 282
Bst4CI ACNGT 1 cut(s) 379
Bst6I CTCTTC 2 cut(s) 120, 150
BstBAI YACGTR 1 cut(s) 31
BstC8I GCNNGC 1 cut(s) 258
BstF5I GGATG 1 cut(s) 253
BstHHI GCGC 1 cut(s) 256
BstKTI GATC 2 cut(s) 39, 64
BstMAI GTCTC 1 cut(s) 67
BstMBI GATC 2 cut(s) 36, 61
BstX2I RGATCY 1 cut(s) 61
BstYI RGATCY 1 cut(s) 61
BtsCI GGATG 1 cut(s) 253
BtsI GCAGTG 1 cut(s) 355
BtsIMutI CAGTG 1 cut(s) 355
Cac8I GCNNGC 1 cut(s) 258
CciI TCATGA 1 cut(s) 55
CfoI GCGC 1 cut(s) 256
Cfr13I GGNCC 1 cut(s) 272
Csp6I GTAC 1 cut(s) 28
CviAII CATG 1 cut(s) 56
CviJI RGCY 5 cut(s) 143, 172, 301, 359, 374
CviKI_1 RGCY 5 cut(s) 143, 172, 301, 359, 374
CviQI GTAC 1 cut(s) 28
DpnI GATC 2 cut(s) 38, 63
DpnII GATC 2 cut(s) 36, 61
DraI TTTAAA 1 cut(s) 195
DriI GACNNNNNGTC 1 cut(s) 133
Eam1104I CTCTTC 2 cut(s) 120, 150
Eam1105I GACNNNNNGTC 1 cut(s) 133
EarI CTCTTC 2 cut(s) 120, 150
Eco31I GGTCTC 1 cut(s) 67
Eco47I GGWCC 1 cut(s) 272
Eco88I CYCGRG 1 cut(s) 324
EcoO109I RGGNCCY 1 cut(s) 272
FaeI CATG 1 cut(s) 59
FaiI YATR 3 cut(s) 57, 242, 394
FalI AAGNNNNNCTT 2 cut(s) 99, 131
FatI CATG 1 cut(s) 55
Fnu4HI GCNGC 1 cut(s) 170
FokI GGATG 1 cut(s) 260
Fsp4HI GCNGC 1 cut(s) 170
GlaI GCGC 1 cut(s) 255
GluI GCNGC 1 cut(s) 170
HhaI GCGC 1 cut(s) 256
Hin1II CATG 1 cut(s) 59
Hin6I GCGC 1 cut(s) 254
HinP1I GCGC 1 cut(s) 254
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
HinfI GANTC 3 cut(s) 134, 209, 327
Hpy166II GTNNAC 1 cut(s) 127
Hpy188III TCNNGA 2 cut(s) 56, 324
Hpy8I GTNNAC 1 cut(s) 127
HpyAV CCTTC 3 cut(s) 101, 178, 182
HpyCH4III ACNGT 1 cut(s) 379
HpyCH4IV ACGT 1 cut(s) 30
HpyCH4V TGCA 4 cut(s) 4, 233, 260, 353
HpySE526I ACGT 1 cut(s) 30
Hsp92II CATG 1 cut(s) 59
HspAI GCGC 1 cut(s) 254
Kzo9I GATC 2 cut(s) 36, 61
LpnPI CCDG 3 cut(s) 110, 200, 288
LweI GCATC 2 cut(s) 90, 241
MaeII ACGT 1 cut(s) 30
MaeIII GTNAC 1 cut(s) 210
MalI GATC 2 cut(s) 38, 63
MboI GATC 2 cut(s) 36, 61
MboII GAAGA 2 cut(s) 107, 167
MflI RGATCY 1 cut(s) 61
MluCI AATT 2 cut(s) 149, 235
MlyI GAGTC 3 cut(s) 143, 218, 336
MnlI CCTC 3 cut(s) 52, 151, 281
MseI TTAA 2 cut(s) 194, 383
MslI CAYNNNNRTG 1 cut(s) 46
NdeII GATC 2 cut(s) 36, 61
NlaIII CATG 1 cut(s) 59
NlaIV GGNNCC 1 cut(s) 63
NmuCI GTSAC 1 cut(s) 210
PaeR7I CTCGAG 1 cut(s) 324
PagI TCATGA 1 cut(s) 55
PkrI GCNGC 1 cut(s) 171
PleI GAGTC 3 cut(s) 142, 217, 335
PpsI GAGTC 3 cut(s) 142, 217, 335
Ppu21I YACGTR 1 cut(s) 31
PpuMI RGGWCCY 1 cut(s) 272
Psp5II RGGWCCY 1 cut(s) 272
PspN4I GGNNCC 1 cut(s) 63
PspPI GGNCC 1 cut(s) 272
PspPPI RGGWCCY 1 cut(s) 272
PsuI RGATCY 1 cut(s) 61
RsaI GTAC 1 cut(s) 29
RsaNI GTAC 1 cut(s) 28
RseI CAYNNNNRTG 1 cut(s) 46
SaqAI TTAA 2 cut(s) 194, 383
SatI GCNGC 1 cut(s) 170
Sau3AI GATC 2 cut(s) 36, 61
Sau96I GGNCC 1 cut(s) 272
SchI GAGTC 3 cut(s) 143, 218, 336
SetI ASST 5 cut(s) 33, 145, 193, 277, 376
SfaNI GCATC 2 cut(s) 90, 241
Sfr274I CTCGAG 1 cut(s) 324
SinI GGWCC 1 cut(s) 272
SlaI CTCGAG 1 cut(s) 324
SmiMI CAYNNNNRTG 1 cut(s) 46
SmlI CTYRAG 1 cut(s) 324
SmoI CTYRAG 1 cut(s) 324
Sse9I AATT 2 cut(s) 149, 235
SsiI CCGC 2 cut(s) 81, 169
TaaI ACNGT 1 cut(s) 379
TaiI ACGT 1 cut(s) 33
TaqI TCGA 3 cut(s) 12, 105, 325
TasI AATT 2 cut(s) 149, 235
TauI GCSGC 1 cut(s) 172
Tru1I TTAA 2 cut(s) 194, 383
Tru9I TTAA 2 cut(s) 194, 383
TscAI CASTG 1 cut(s) 355
TseFI GTSAC 1 cut(s) 210
Tsp45I GTSAC 1 cut(s) 210
TspDTI ATGAA 1 cut(s) 44
TspRI CASTG 1 cut(s) 355
VpaK11BI GGWCC 1 cut(s) 272
XapI RAATTY 1 cut(s) 235
XhoI CTCGAG 1 cut(s) 324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.