RchiOBHm_Chr5g0079151

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
84855500 .. 84856479
980 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35361

Sequence Viewer

Length: 903 bp
ATGGGATTTTTCTTCATTTACCGGAAGAAACATGTGAGGCCTAACCATAATGTTTTGGACTCGAATTTGCGCTCTTTTAATTATGAAGAGCTTAAAGAAGCAACAAATGGATTTAATGAAGAATTAGGAAAGGGTGCTTTTGGAGTTGTTTACAAAGGAATATTGCAAATTGGTTCTGGTGTCCCCGTGGCAGTGAAGAAGCTAAAATTTGTGGTACAAGATAGTGAGAAGGAATTCAAGACGGACCTGAACATAATTGGTCAAACACATCACAAGAATCTGGTTAGACTTGTTGGATATTGTGACGAGGGACAAGAGCGGCAAAGGATTGATATTGCATATGGAGTTGCGAAAGGACTTCGGTACTTACATGAAGAGTGCAGAACCCAGATCATCCATTGTGACATTAAGCCTCAGAACATTCTTCTAGATGATCACTACACTGTTCAGATAGCTGACTTTGGATTGGCAAAGCTTTTAATGATGAATCAGAGCCAGACTCAAACTGCCATAAGAGGAACAAAAGGGTATGTTGCACCTGAGTGGTTCCGGAACATGGCAATCAGTACCAAAGTCGATGTGTATAGCTTTGGTGTGGTGCTGCTAGAGGTCATTTGCTGCAGGAGAAGCGTTGATAGGGAAAATGTTTCCGAAGAGAGAGCCATTTTAACAGATTGGGTCTATGACTGCAACCACGATGGAGTCTTGGATGCGATTGTTGACAACGAAATGGAGGCCTTGCATGAGAAAACAAAGCTAGAACGGTTTGTCATGGTTGCTCCTTGGTGTATTCAAGAAGACCCTTCTCTTCGACCCACTATGAGGAAGGTTGTGCGGATGCTTGAAGGAGTAGTGGATGTACATGTTCCACCATGTCCATCACCTTTCAGCAGAGCAGGCTGA

Protein Analysis

300

Amino Acids

34.28

Weight (kDa)

6.56

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 38 - 106 3.7e-11 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 39 - 106 3.4e-07 Protein kinase domain
Pkinase PF00069 106 - 279 1.8e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 106 - 281 8.6e-26 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 319
AccIII TCCGGA 1 cut(s) 549
AciI CCGC 2 cut(s) 319, 835
AcsI RAATTY 3 cut(s) 64, 206, 233
AfaI GTAC 4 cut(s) 216, 365, 568, 861
AfiI CCNNNNNNNGG 2 cut(s) 556, 822
AflIII ACRYGT 2 cut(s) 31, 862
AgsI TTSAA 3 cut(s) 238, 794, 845
AleI CACNNNNGTG 1 cut(s) 541
AluBI AGCT 6 cut(s) 91, 202, 455, 475, 588, 757
AluI AGCT 6 cut(s) 91, 202, 455, 475, 588, 757
Aor13HI TCCGGA 1 cut(s) 549
AoxI GGCC 2 cut(s) 38, 735
ApeKI GCWGC 2 cut(s) 601, 618
ApoI RAATTY 3 cut(s) 64, 206, 233
Asp700I GAANNNNTTC 1 cut(s) 233
AspLEI GCGC 1 cut(s) 72
AspS9I GGNCC 1 cut(s) 244
AsuHPI GGTGA 1 cut(s) 873
AvaII GGWCC 1 cut(s) 244
BbsI GAAGAC 1 cut(s) 804
BbvI GCAGC 2 cut(s) 588, 605
BccI CCATC 2 cut(s) 692, 886
BclI TGATCA 1 cut(s) 433
BfaI CTAG 3 cut(s) 428, 605, 758
BfmI CTRYAG 1 cut(s) 619
BisI GCNGC 3 cut(s) 320, 602, 619
BlsI GCNGC 3 cut(s) 321, 603, 620
Bme18I GGWCC 1 cut(s) 244
BmgT120I GGNCC 1 cut(s) 244
BmiI GGNNCC 1 cut(s) 548
BmsI GCATC 2 cut(s) 700, 828
BpiI GAAGAC 1 cut(s) 804
BplI GAGNNNNNCTC 2 cut(s) 484, 516
BsaJI CCNNGG 2 cut(s) 186, 782
BsaWI WCCGGW 2 cut(s) 21, 549
Bsc4I CCNNNNNNNGG 2 cut(s) 556, 822
BseAI TCCGGA 1 cut(s) 549
BseDI CCNNGG 2 cut(s) 186, 782
BseGI GGATG 4 cut(s) 393, 715, 843, 862
BseLI CCNNNNNNNGG 2 cut(s) 556, 822
BseMII CTCAG 2 cut(s) 428, 531
BseXI GCAGC 2 cut(s) 588, 605
BsgI GTGCAG 1 cut(s) 400
BshFI GGCC 2 cut(s) 40, 737
BsiSI CCGG 2 cut(s) 22, 550
BslFI GGGAC 2 cut(s) 167, 324
BslI CCNNNNNNNGG 2 cut(s) 556, 822
BsmFI GGGAC 2 cut(s) 167, 324
BsnI GGCC 2 cut(s) 40, 737
Bsp13I TCCGGA 1 cut(s) 549
Bsp1407I TGTACA 1 cut(s) 859
Bsp143I GATC 2 cut(s) 390, 433
BspACI CCGC 2 cut(s) 319, 835
BspANI GGCC 2 cut(s) 40, 737
BspCNI CTCAG 2 cut(s) 427, 532
BspEI TCCGGA 1 cut(s) 549
BspLI GGNNCC 1 cut(s) 548
BspMAI CTGCAG 1 cut(s) 623
BspQI GCTCTTC 1 cut(s) 81
BsrBI CCGCTC 1 cut(s) 319
BsrGI TGTACA 1 cut(s) 859
BssECI CCNNGG 2 cut(s) 186, 782
BssMI GATC 2 cut(s) 390, 433
BssT1I CCWWGG 1 cut(s) 782
Bst4CI ACNGT 2 cut(s) 445, 765
Bst6I CTCTTC 4 cut(s) 81, 369, 648, 813
BstAUI TGTACA 1 cut(s) 859
BstC8I GCNNGC 1 cut(s) 898
BstDEI CTNAG 2 cut(s) 414, 540
BstDSI CCRYGG 1 cut(s) 186
BstF5I GGATG 4 cut(s) 393, 715, 843, 862
BstHHI GCGC 1 cut(s) 72
BstKTI GATC 2 cut(s) 393, 436
BstMBI GATC 2 cut(s) 390, 433
BstMWI GCNNNNNNNGC 2 cut(s) 627, 897
BstNSI RCATGY 2 cut(s) 35, 866
BstSFI CTRYAG 1 cut(s) 619
BstV1I GCAGC 2 cut(s) 588, 605
BstV2I GAAGAC 1 cut(s) 804
BsuRI GGCC 2 cut(s) 40, 737
BtgI CCRYGG 1 cut(s) 186
BtsCI GGATG 4 cut(s) 393, 715, 843, 862
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 2 cut(s) 198, 441
Cac8I GCNNGC 1 cut(s) 898
CfoI GCGC 1 cut(s) 72
Cfr13I GGNCC 1 cut(s) 244
Csp6I GTAC 4 cut(s) 215, 364, 567, 860
CviAII CATG 7 cut(s) 32, 371, 556, 743, 772, 863, 873
CviQI GTAC 4 cut(s) 215, 364, 567, 860
DdeI CTNAG 2 cut(s) 414, 540
DpnI GATC 2 cut(s) 392, 435
DpnII GATC 2 cut(s) 390, 433
Eam1104I CTCTTC 4 cut(s) 81, 369, 648, 813
EarI CTCTTC 4 cut(s) 81, 369, 648, 813
Eco130I CCWWGG 1 cut(s) 782
Eco147I AGGCCT 2 cut(s) 40, 737
Eco47I GGWCC 1 cut(s) 244
EcoRI GAATTC 1 cut(s) 233
EcoT14I CCWWGG 1 cut(s) 782
ErhI CCWWGG 1 cut(s) 782
FaeI CATG 7 cut(s) 35, 374, 559, 746, 775, 866, 876
FaqI GGGAC 2 cut(s) 167, 324
FatI CATG 7 cut(s) 31, 370, 555, 742, 771, 862, 872
FauNDI CATATG 1 cut(s) 340
FbaI TGATCA 1 cut(s) 433
Fnu4HI GCNGC 3 cut(s) 320, 602, 619
FokI GGATG 4 cut(s) 380, 722, 850, 869
Fsp4HI GCNGC 3 cut(s) 320, 602, 619
FspBI CTAG 3 cut(s) 428, 605, 758
GlaI GCGC 1 cut(s) 71
GluI GCNGC 3 cut(s) 320, 602, 619
HaeIII GGCC 2 cut(s) 40, 737
HapII CCGG 2 cut(s) 22, 550
HhaI GCGC 1 cut(s) 72
Hin1II CATG 7 cut(s) 35, 374, 559, 746, 775, 866, 876
Hin6I GCGC 1 cut(s) 70
HinP1I GCGC 1 cut(s) 70
HincII GTYRAC 1 cut(s) 721
HindII GTYRAC 1 cut(s) 721
HindIII AAGCTT 1 cut(s) 473
HinfI GANTC 5 cut(s) 59, 277, 487, 499, 702
HpaII CCGG 2 cut(s) 22, 550
HphI GGTGA 1 cut(s) 873
Hpy166II GTNNAC 2 cut(s) 151, 721
Hpy188I TCNGA 4 cut(s) 417, 450, 492, 652
Hpy188III TCNNGA 4 cut(s) 238, 428, 550, 794
Hpy8I GTNNAC 2 cut(s) 151, 721
HpyAV CCTTC 4 cut(s) 223, 813, 820, 839
HpyCH4III ACNGT 2 cut(s) 445, 765
HpyCH4V TGCA 7 cut(s) 166, 338, 381, 536, 621, 690, 742
HpyF10VI GCNNNNNNNGC 2 cut(s) 627, 897
HpyF3I CTNAG 2 cut(s) 414, 540
Hsp92II CATG 7 cut(s) 35, 374, 559, 746, 775, 866, 876
HspAI GCGC 1 cut(s) 70
Kpn2I TCCGGA 1 cut(s) 549
Ksp22I TGATCA 1 cut(s) 433
Kzo9I GATC 2 cut(s) 390, 433
LguI GCTCTTC 1 cut(s) 81
LmnI GCTCC 1 cut(s) 784
Lsp1109I GCAGC 2 cut(s) 588, 605
LweI GCATC 2 cut(s) 700, 828
MaeI CTAG 3 cut(s) 428, 605, 758
MaeIII GTNAC 2 cut(s) 302, 401
MalI GATC 2 cut(s) 392, 435
MbiI CCGCTC 1 cut(s) 319
MboI GATC 2 cut(s) 390, 433
MluCI AATT 7 cut(s) 64, 79, 122, 168, 206, 233, 255
MlyI GAGTC 3 cut(s) 53, 493, 711
MmeI TCCRAC 1 cut(s) 274
MnlI CCTC 7 cut(s) 30, 301, 423, 509, 601, 727, 816
MroI TCCGGA 1 cut(s) 549
MroXI GAANNNNTTC 1 cut(s) 233
MseI TTAA 6 cut(s) 78, 93, 114, 408, 479, 668
MslI CAYNNNNRTG 1 cut(s) 541
MspI CCGG 2 cut(s) 22, 550
MwoI GCNNNNNNNGC 2 cut(s) 627, 897
NdeI CATATG 1 cut(s) 340
NdeII GATC 2 cut(s) 390, 433
NlaIII CATG 7 cut(s) 35, 374, 559, 746, 775, 866, 876
NlaIV GGNNCC 1 cut(s) 548
NmuCI GTSAC 2 cut(s) 302, 401
NspI RCATGY 2 cut(s) 35, 866
OliI CACNNNNGTG 1 cut(s) 541
PceI AGGCCT 2 cut(s) 40, 737
PciI ACATGT 2 cut(s) 31, 862
PciSI GCTCTTC 1 cut(s) 81
PdmI GAANNNNTTC 1 cut(s) 233
PfeI GAWTC 2 cut(s) 277, 487
PkrI GCNGC 3 cut(s) 321, 603, 620
PleI GAGTC 3 cut(s) 53, 493, 710
PpsI GAGTC 3 cut(s) 53, 493, 710
PscI ACATGT 2 cut(s) 31, 862
PspN4I GGNNCC 1 cut(s) 548
PspPI GGNCC 1 cut(s) 244
PstI CTGCAG 1 cut(s) 623
RsaI GTAC 4 cut(s) 216, 365, 568, 861
RsaNI GTAC 4 cut(s) 215, 364, 567, 860
RseI CAYNNNNRTG 1 cut(s) 541
SapI GCTCTTC 1 cut(s) 81
SaqAI TTAA 6 cut(s) 78, 93, 114, 408, 479, 668
SatI GCNGC 3 cut(s) 320, 602, 619
Sau3AI GATC 2 cut(s) 390, 433
Sau96I GGNCC 1 cut(s) 244
SchI GAGTC 3 cut(s) 53, 493, 711
SfaNI GCATC 2 cut(s) 700, 828
SfcI CTRYAG 1 cut(s) 619
SinI GGWCC 1 cut(s) 244
SmiMI CAYNNNNRTG 1 cut(s) 541
Sse9I AATT 7 cut(s) 64, 79, 122, 168, 206, 233, 255
SseBI AGGCCT 2 cut(s) 40, 737
SsiI CCGC 2 cut(s) 319, 835
SspI AATATT 1 cut(s) 162
SspMI CTAG 3 cut(s) 428, 605, 758
StuI AGGCCT 2 cut(s) 40, 737
StyI CCWWGG 1 cut(s) 782
TaaI ACNGT 2 cut(s) 445, 765
TaqI TCGA 3 cut(s) 62, 576, 811
TasI AATT 7 cut(s) 64, 79, 122, 168, 206, 233, 255
TatI WGTACW 1 cut(s) 859
TauI GCSGC 1 cut(s) 322
TfiI GAWTC 2 cut(s) 277, 487
Tru1I TTAA 6 cut(s) 78, 93, 114, 408, 479, 668
Tru9I TTAA 6 cut(s) 78, 93, 114, 408, 479, 668
TscAI CASTG 2 cut(s) 198, 448
TseFI GTSAC 2 cut(s) 302, 401
TseI GCWGC 2 cut(s) 601, 618
Tsp45I GTSAC 2 cut(s) 302, 401
TspDTI ATGAA 5 cut(s) 4, 99, 132, 387, 500
TspGWI ACGGA 1 cut(s) 257
TspRI CASTG 2 cut(s) 198, 448
VpaK11BI GGWCC 1 cut(s) 244
XapI RAATTY 3 cut(s) 64, 206, 233
XbaI TCTAGA 1 cut(s) 427
XceI RCATGY 2 cut(s) 35, 866
XmnI GAANNNNTTC 1 cut(s) 233
XspI CTAG 3 cut(s) 428, 605, 758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.