RchiOBHm_Chr5g0079131

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
84842301 .. 84844715
2415 bp
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UTR
Exon/CDS
Intron
PRQ35360

Sequence Viewer

Length: 2415 bp
ATGGCTTTTACAGTACGGCTGCTTCTGCTTATTTCCTCATTGTTTCTGGTTCTAGAATCTCTGTTTGTCCAGACTAATAGTGGCAAAGTAGATGTGGGAGCTTCTCTCTCTGCAACTGCAGGTAACAGCACCTCATGGCTTTCTCCTTCTGGCGATTTCGCCTTTGGTTTTCGACAACTCGAAAACAGTGATCTTTTCTTGCTTTCTTTATGGTATGCCAAGATTCCAGACAGAACCATAGTTTGGTATGCAAATAATGGGGATAGTCCTGCAGCTGTAGCTAAGGGTTCACTTCTGAATTTGACTGCTGACAGTGGACTAGTGCTTACAAGTCCTCGCGGTGTTCAGCTTTGGAAATCTGAATCCATTTCTGGAGTTGTTGCCTTTGGGGTCTTGAATGATACAGGCAACTTTGTTCTTGAAGGTGACAATTCAGAGAGCTTATGGGAGACCTTCAATTATCCAACTCATACAATTTTACCAGGGCAGGATATCGAAAAAGGAGGGAAGCTTCGGTCTCAACGATCCGAGACTAACTTTTCGAAAGGAAGATTCGAGCTACGTATGCAAGATGATGGCAACCTTGTACTTGTCACCATAAACTTGCCCACTGAGTTTGTCAACGCGCCTTACTATGCAAGTGACACTACCGGTGATTCAAACTCTTCTACTGCTGGTACAAAGCTGGAGTTCAATAGCTCAGGCTACATGTATGTTCTGAGAGAGAACGGCGAGAAACTCACCATCAAAGAAGCAGAGACAGTCTCAGCTAGGAGCTTCTATCTTAGAGCAACCCTCAACTTTGATGGGGTTTTCGCTCAATACTCTCACCCGAGAGATTCCTCGGGTAACTGGAGTGTTGTTTGGTCAGTGCCAGATAACATATGCAATATGGAGGTTGCTTCAGGTCTTGGTGTATGTGGCTACAACAGTATCTGCACTCTCCAAGGTCAGAGGCCAACCTGTGCATGCCCAAAAGGATACTCTTTACTGGATCCGAATGATCCGTATGGGAATTGCAAGCCGGATTTCATACAAGGCTGTGAAGAAGATAAGCTGAGTCCCACAAATGATATATATGAAGTTCAGATGCTGAACAATACGGATTGGCCATTGTCAGATTTTATGCAGTTAAATCCTTCTACTCCAGAGAGTTGCAACCAATCTTGCTTTGAAGATTGTTTGTGTGCTGTTGCTATTTACAGAGTTGAAACCTGTTGGAAAAAGAAGTTACCTCTTTCAAATGGGAGAGTGGATAGCGGGCTTAATTCACAGGCCTTCATCAAAGTCAGGAAGGGTAATTTAACTCTACCAGTTCCTCAACCGCCAAATCCGGATGACAAGAAGAGGAAGAACCAGACCACTTTAATACGCGTTGGATCAGCGCTTCTTGGTACCTCAATCTTTGCTAACGTTATGTTAAGTGCTATAGTTTGTATGGGATTTTTCTTCATTTACCGGAAGAAACATGTGAGGCCTAACCAAAATGTTTTGGACTCAAATCTGCGCTCTTTTAGTTATGAAGAGCTTAAAGAAGCAACAAATGGATTTAACGAAGAATTAGGAAAGGGTGCTTTTGGAGTTGTTTACAAAGGAATATTGCAAATTGGTTCTGGTGTCCCAGTGGCAGTGAAGAAGCTAGATTTTGTGGTACAAGATAGTGAGAAGGAATTCAAGACGGAACTGAAAATAATTGGTCAGACACATCACAAGAATCTGGTTAGACTTGTTGGATATTGTGACGAGGGACAAGAGCGGTTACTAGTATATGAGTTCTTGAGCAATGGGACATTAGCAAACTTTCTTTTTGCTGATACAAAACCAAGTTGGAAGCAAAGGATTGATATTGCTTACGGAGTTGCTAAAGGACTTCTGTACTTACATGAAGAGTGCAGTACCCAGATCATCCATTGTGACATTAAGCCTCAGAACATTCTTCTAGATGATTACTACAATGCTCGGATAGCTGACTTTGGATTGGCAAAGCTTTTAATGATGAATCAGAGCCAGACTCAAACTGCCATAAGAGGAACAAATGGGTATGTTGCACCTGAGTGGTTCCGGAACCTGCCAATCACTACCAAAGTCGATGTGTACAGCTTTGGTGTGGTGCTGCTAGAGGTCATTTGCTGCAGGAGAAGCGTTGATATGGAAAATGTTTCTGAAGAGAGAGCCATTTTAACCGATTGGGTCTATGACCGCTACCTCGAAGGAGTCTGGGATGCGATTGTTGACAACGAAATGGAGGCCTTGCATGAGAAAACAAAGCTGGAAAGGTTTGTCATGGTTGCTCTTTGGTGCATTCAAGAAGACCCTACTCTTCGACCCACTATGAGGAAGGTTGTGCATATGCTTGAAGGTGTAGTGGAAGTACATGTTCCACCATGTCCCTCACCATACAGCAGTGAAGGCTGA

Protein Analysis

804

Amino Acids

89.61

Weight (kDa)

5.24

Isoelectric Point (pI)

33.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 79 - 168 2.2e-13 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 517 - 785 3.3e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 518 - 783 5.5e-49 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000130)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43780
malus_domestica MD03G1019500.v1.1 MD03G1019800.v1.1 MD03G1019900.v1.1 MD03G1020000.v1.1 MD03G1020200.v1.1 MD03G1020300.v1.1 MD05G1226500.v1.1 MD05G1226600.v1.1 MD05G1226700.v1.1 MD05G1226800.v1.1 MD09G1060200.v1.1 MD11G1021100.v1.1 MD11G1021300.v1.1 MD11G1021400.v1.1 MD11G1021500.v1.1 MD11G1024600.v1.1 MD11G1026700.v1.1
prunus_persica Prupe.6G016300_v2.0.a1 Prupe.6G016600_v2.0.a1 Prupe.6G016700_v2.0.a1 Prupe.6G017000_v2.0.a1 Prupe.6G017100_v2.0.a1 Prupe.6G017200_v2.0.a1 Prupe.6G017300_v2.0.a1 Prupe.6G017400_v2.0.a1 Prupe.6G017500_v2.0.a1
pyrus_communis pycom02g26630 pycom03g01670 pycom03g01710 pycom03g01720 pycom05g20850 pycom11g01710 pycom11g01730 pycom11g01740 pycom11g01960
rosa_chinensis RchiOBHm_Chr1g0313471 RchiOBHm_Chr1g0313491 RchiOBHm_Chr1g0313521 RchiOBHm_Chr1g0329041 RchiOBHm_Chr5g0077581 RchiOBHm_Chr5g0077681 RchiOBHm_Chr5g0077751 RchiOBHm_Chr5g0077771 RchiOBHm_Chr5g0078381 RchiOBHm_Chr5g0078421 RchiOBHm_Chr5g0078481 RchiOBHm_Chr5g0078491 RchiOBHm_Chr5g0078511 RchiOBHm_Chr5g0078561 RchiOBHm_Chr5g0078581 RchiOBHm_Chr5g0078621 RchiOBHm_Chr5g0078631 RchiOBHm_Chr5g0078641 RchiOBHm_Chr5g0078681 RchiOBHm_Chr5g0078741 RchiOBHm_Chr5g0078781 RchiOBHm_Chr5g0078791 RchiOBHm_Chr5g0078821 RchiOBHm_Chr5g0078851 RchiOBHm_Chr5g0078861 RchiOBHm_Chr5g0078881 RchiOBHm_Chr5g0078911 RchiOBHm_Chr5g0078921 RchiOBHm_Chr5g0078931 RchiOBHm_Chr5g0078951 RchiOBHm_Chr5g0079061 RchiOBHm_Chr5g0079071 RchiOBHm_Chr5g0079101 RchiOBHm_Chr5g0079111 RchiOBHm_Chr5g0079131 RchiOBHm_Chr5g0079151 RchiOBHm_Chr5g0079161 RchiOBHm_Chr5g0079211 RchiOBHm_Chr5g0079241 RchiOBHm_Chr7g0223671
rosa_laevigata RLG00000001266 RLG00000036708 RLG00000036719 RLG00000036772 RLG00000036773 RLG00000036776 RLG00000036780 RLG00000036781 RLG00000036783 RLG00000036788 RLG00000036790 RLG00000036792 RLG00000036794 RLG00000036797 RLG00000036798 RLG00000036800 RLG00000036801 RLG00000036802 RLG00000036803 RLG00000036805 RLG00000036807 RLG00000036808
rosa_multiflora Rmu_co7998958.1_g000001 Rmu_co8175864.1_g000001 Rmu_co8214884.1_g000001 Rmu_co8225446.1_g000001 Rmu_sc0000607.1_g000011 Rmu_sc0000607.1_g000012 Rmu_sc0000631.1_g000001 Rmu_sc0000631.1_g000003 Rmu_sc0000631.1_g000010 Rmu_sc0000631.1_g000012 Rmu_sc0000631.1_g000020 Rmu_sc0001347.1_g000014 Rmu_sc0002187.1_g000011 Rmu_sc0002187.1_g000014 Rmu_sc0002187.1_g000024 Rmu_sc0002187.1_g000025 Rmu_sc0003413.1_g000051 Rmu_sc0004140.1_g000002 Rmu_sc0004140.1_g000003 Rmu_sc0004140.1_g000015 Rmu_sc0004140.1_g000026 Rmu_sc0004140.1_g000036 Rmu_sc0004140.1_g000042 Rmu_sc0004140.1_g000046 Rmu_sc0004140.1_g000048 Rmu_sc0004277.1_g000002 Rmu_sc0008700.1_g000002 Rmu_sc0011280.1_g000001 Rmu_sc0011280.1_g000002 Rmu_sc0011280.1_g000009 Rmu_sc0012487.1_g000003 Rmu_sc0012487.1_g000007 Rmu_sc0012487.1_g000009 Rmu_sc0012931.1_g000001 Rmu_sc0012931.1_g000002 Rmu_sc0012931.1_g000009 Rmu_sc0015122.1_g000002 Rmu_sc0022488.1_g000001 Rmu_ssc0000425.1_g000018
rosa_roxburghii Rroxscaffold_164G00436380 Rroxscaffold_1G00003360 Rroxscaffold_1G00003370 Rroxscaffold_1G00003660 Rroxscaffold_1G00003790 Rroxscaffold_1G00003840 Rroxscaffold_1G00003950 Rroxscaffold_1G00004380 Rroxscaffold_4G00332170
rosa_rugosa Rorug05G0455800 Rorug05G0456500 Rorug05G0460800 Rorug05G0461000 Rorug05G0461200 Rorug05G0461200 Rorug05G0461300 Rorug05G0461600 Rorug05G0461700 Rorug05G0461900 Rorug05G0462000 Rorug05G0462400 Rorug05G0462500 Rorug05G0462800 Rorug05G0463200.1 Rorug05G0463300
rosa_samantha Rh1CG000600 Rh1CG008300 Rh1CG360600 Rh5AG509700 Rh5AG509800 Rh5AG510700 Rh5AG515000 Rh5AG515600 Rh5BG531300 Rh5BG531400 Rh5BG533600 Rh5BG538200 Rh5BG538300 Rh5BG538400 Rh5BG538500 Rh5BG539100 Rh5BG539200 Rh5BG539400 Rh5DG545100 Rh5DG549000 Rh5DG549200 Rh5DG549500 Rh5DG549600 Rh5DG549800 Rh5DG549900 Rh5DG550000 Rh5DG550200 Rh5DG550300 Rh7AG436900 Rh7CG456800
rosa_wichuraiana Rw0G003110 Rw0G003120 Rw0G005240 Rw0G023800 Rw0G023830 Rw1G007840 Rw5G000030 Rw5G047760 Rw5G047780 Rw5G047810 Rw5G047900 Rw5G047920 Rw5G047970 Rw5G047980 Rw5G048000 Rw5G048010 Rw5G048030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 110, 2076
Acc65I GGTACC 1 cut(s) 1394
AccB1I GGYRCC 1 cut(s) 1394
AccB7I CCANNNNNTGG 1 cut(s) 243
AccBSI CCGCTC 1 cut(s) 1756
AccII CGCG 3 cut(s) 339, 626, 1374
AccIII TCCGGA 2 cut(s) 1333, 2061
AciI CCGC 5 cut(s) 339, 1260, 1325, 1756, 2200
AclI AACGTT 1 cut(s) 1413
AclWI GGATC 5 cut(s) 519, 989, 998, 1002, 1387
AcoI YGGCCR 1 cut(s) 1109
AcsI RAATTY 2 cut(s) 298, 1670
AcuI CTGAAG 2 cut(s) 888, 2184
AfaI GTAC 9 cut(s) 15, 588, 679, 1396, 1653, 1877, 1897, 2096, 2373
AfeI AGCGCT 1 cut(s) 1386
AfiI CCNNNNNNNGG 2 cut(s) 243, 2334
AflIII ACRYGT 4 cut(s) 708, 1372, 1468, 2374
AgeI ACCGGT 1 cut(s) 650
AhlI ACTAGT 2 cut(s) 319, 1762
AjnI CCWGG 1 cut(s) 481
AjuI GAANNNNNNNTTGG 2 cut(s) 226, 258
AleI CACNNNNGTG 1 cut(s) 2053
Alw26I GTCTC 5 cut(s) 443, 522, 524, 752, 769
AlwI GGATC 5 cut(s) 519, 989, 998, 1002, 1387
AlwNI CAGNNNCTG 2 cut(s) 936, 1093
Ama87I CYCGRG 2 cut(s) 832, 844
Aor13HI TCCGGA 2 cut(s) 1333, 2061
Aor51HI AGCGCT 1 cut(s) 1386
AoxI GGCC 5 cut(s) 956, 1109, 1275, 1475, 2247
ApeKI GCWGC 4 cut(s) 19, 272, 2113, 2130
ApoI RAATTY 2 cut(s) 298, 1670
ArsI GACNNNNNNTTYG 2 cut(s) 523, 555
AsiGI ACCGGT 1 cut(s) 650
Asp700I GAANNNNTTC 1 cut(s) 1670
Asp718I GGTACC 1 cut(s) 1394
AspLEI GCGC 3 cut(s) 628, 1387, 1509
AsuHPI GGTGA 6 cut(s) 437, 586, 665, 733, 821, 2385
AsuII TTCGAA 1 cut(s) 542
AvaI CYCGRG 2 cut(s) 832, 844
BaeI ACNNNNGTAYC 2 cut(s) 916, 949
BalI TGGCCA 1 cut(s) 1111
BamHI GGATCC 1 cut(s) 994
BanI GGYRCC 1 cut(s) 1394
BarI GAAGNNNNNNTAC 1 cut(s) 38
BbsI GAAGAC 1 cut(s) 2316
BbvI GCAGC 4 cut(s) 6, 284, 2100, 2117
BccI CCATC 3 cut(s) 569, 752, 800
BceAI ACGGC 2 cut(s) 32, 745
BciT130I CCWGG 1 cut(s) 483
BciVI GTATCC 1 cut(s) 974
BcoDI GTCTC 5 cut(s) 443, 522, 524, 752, 769
BcuI ACTAGT 2 cut(s) 319, 1762
BfaI CTAG 7 cut(s) 53, 320, 771, 1640, 1763, 1940, 2117
BfmI CTRYAG 5 cut(s) 117, 270, 276, 1428, 2131
BfoI RGCGCY 1 cut(s) 1388
BfuAI ACCTGC 2 cut(s) 110, 2076
BfuI GTATCC 1 cut(s) 974
BisI GCNGC 4 cut(s) 20, 273, 2114, 2131
BlsI GCNGC 4 cut(s) 21, 274, 2115, 2132
Bme1390I CCNGG 1 cut(s) 483
BmeT110I CYCGRG 2 cut(s) 832, 844
BmiI GGNNCC 4 cut(s) 996, 1396, 2060, 2066
BmrFI CCNGG 1 cut(s) 483
BmrI ACTGGG 1 cut(s) 1616
BmsI GCATC 2 cut(s) 1080, 2212
BmuI ACTGGG 1 cut(s) 1616
BpiI GAAGAC 1 cut(s) 2316
BplI GAGNNNNNCTC 8 cut(s) 90, 122, 749, 781, 780, 812, 1996, 2028
BpmI CTGGAG 4 cut(s) 393, 707, 874, 1131
Bpu10I CCTNAGC 2 cut(s) 282, 700
Bpu14I TTCGAA 1 cut(s) 542
BpuEI CTTGAG 1 cut(s) 1798
BsaAI YACGTR 1 cut(s) 563
BsaI GGTCTC 2 cut(s) 443, 522
BsaJI CCNNGG 3 cut(s) 482, 843, 946
BsaWI WCCGGW 4 cut(s) 650, 1333, 1458, 2061
Bsc4I CCNNNNNNNGG 2 cut(s) 243, 2334
Bse118I RCCGGY 1 cut(s) 650
Bse1I ACTGG 4 cut(s) 857, 996, 1313, 1622
Bse3DI GCAATG 1 cut(s) 1789
BseAI TCCGGA 2 cut(s) 1333, 2061
BseBI CCWGG 1 cut(s) 483
BseDI CCNNGG 3 cut(s) 482, 843, 946
BseGI GGATG 3 cut(s) 1342, 1905, 2227
BseLI CCNNNNNNNGG 2 cut(s) 243, 2334
BseMI GCAATG 1 cut(s) 1789
BseMII CTCAG 7 cut(s) 603, 710, 714, 780, 1049, 1940, 2043
BseNI ACTGG 4 cut(s) 857, 996, 1313, 1622
BseXI GCAGC 4 cut(s) 6, 284, 2100, 2117
BsgI GTGCAG 2 cut(s) 922, 1912
Bsh1236I CGCG 3 cut(s) 339, 626, 1374
BshFI GGCC 5 cut(s) 958, 1111, 1277, 1477, 2249
BshNI GGYRCC 1 cut(s) 1394
BshTI ACCGGT 1 cut(s) 650
BsiHKCI CYCGRG 2 cut(s) 832, 844
BsiSI CCGG 5 cut(s) 651, 1025, 1334, 1459, 2062
BslFI GGGAC 5 cut(s) 1047, 1604, 1761, 1801, 2373
BslI CCNNNNNNNGG 2 cut(s) 243, 2334
BsmAI GTCTC 5 cut(s) 443, 522, 524, 752, 769
BsmFI GGGAC 5 cut(s) 1047, 1604, 1761, 1801, 2373
BsmI GAATGC 1 cut(s) 2301
BsnI GGCC 5 cut(s) 958, 1111, 1277, 1477, 2249
Bso31I GGTCTC 2 cut(s) 443, 522
BsoBI CYCGRG 2 cut(s) 832, 844
Bsp119I TTCGAA 1 cut(s) 542
Bsp13I TCCGGA 2 cut(s) 1333, 2061
Bsp1407I TGTACA 1 cut(s) 2094
Bsp143I GATC 6 cut(s) 190, 524, 994, 1003, 1379, 1902
BspACI CCGC 5 cut(s) 339, 1260, 1325, 1756, 2200
BspANI GGCC 5 cut(s) 958, 1111, 1277, 1477, 2249
BspCNI CTCAG 7 cut(s) 604, 711, 713, 779, 1050, 1939, 2044
BspEI TCCGGA 2 cut(s) 1333, 2061
BspFNI CGCG 3 cut(s) 339, 626, 1374
BspLI GGNNCC 4 cut(s) 996, 1396, 2060, 2066
BspMAI CTGCAG 3 cut(s) 121, 274, 2135
BspMI ACCTGC 2 cut(s) 110, 2076
BspPI GGATC 5 cut(s) 519, 989, 998, 1002, 1387
BspQI GCTCTTC 1 cut(s) 1518
BspT104I TTCGAA 1 cut(s) 542
BspT107I GGYRCC 1 cut(s) 1394
BspTNI GGTCTC 2 cut(s) 443, 522
BsrBI CCGCTC 1 cut(s) 1756
BsrDI GCAATG 1 cut(s) 1789
BsrFI RCCGGY 1 cut(s) 650
BsrGI TGTACA 1 cut(s) 2094
BsrI ACTGG 4 cut(s) 857, 996, 1313, 1622
BssAI RCCGGY 1 cut(s) 650
BssECI CCNNGG 3 cut(s) 482, 843, 946
BssMI GATC 6 cut(s) 190, 524, 994, 1003, 1379, 1902
BssT1I CCWWGG 1 cut(s) 946
Bst2UI CCWGG 1 cut(s) 483
Bst4CI ACNGT 5 cut(s) 13, 188, 314, 763, 932
Bst6I CTCTTC 6 cut(s) 670, 1340, 1518, 1881, 2160, 2325
BstAUI TGTACA 1 cut(s) 2094
BstBAI YACGTR 1 cut(s) 563
BstBI TTCGAA 1 cut(s) 542
BstC8I GCNNGC 3 cut(s) 970, 1022, 1262
BstDEI CTNAG 9 cut(s) 282, 612, 700, 719, 766, 785, 1058, 1926, 2052
BstF5I GGATG 3 cut(s) 1342, 1905, 2227
BstFNI CGCG 3 cut(s) 339, 626, 1374
BstH2I RGCGCY 1 cut(s) 1388
BstHHI GCGC 3 cut(s) 628, 1387, 1509
BstKTI GATC 6 cut(s) 193, 527, 997, 1006, 1382, 1905
BstMAI GTCTC 5 cut(s) 443, 522, 524, 752, 769
BstMBI GATC 6 cut(s) 190, 524, 994, 1003, 1379, 1902
BstMWI GCNNNNNNNGC 6 cut(s) 25, 278, 565, 1964, 2139, 2409
BstNI CCWGG 1 cut(s) 483
BstNSI RCATGY 4 cut(s) 712, 972, 1472, 2378
BstSCI CCNGG 1 cut(s) 481
BstSFI CTRYAG 5 cut(s) 117, 270, 276, 1428, 2131
BstSNI TACGTA 1 cut(s) 563
BstUI CGCG 3 cut(s) 339, 626, 1374
BstV1I GCAGC 4 cut(s) 6, 284, 2100, 2117
BstV2I GAAGAC 1 cut(s) 2316
BstX2I RGATCY 1 cut(s) 994
BstYI RGATCY 1 cut(s) 994
BsuI GTATCC 1 cut(s) 974
BsuRI GGCC 5 cut(s) 958, 1111, 1277, 1477, 2249
BtsCI GGATG 3 cut(s) 1342, 1905, 2227
BtsI GCAGTG 2 cut(s) 1635, 2410
BtsIMutI CAGTG 7 cut(s) 193, 319, 609, 876, 1629, 1635, 2410
BveI ACCTGC 2 cut(s) 110, 2076
Cac8I GCNNGC 3 cut(s) 970, 1022, 1262
CaiI CAGNNNCTG 2 cut(s) 936, 1093
CfoI GCGC 3 cut(s) 628, 1387, 1509
Cfr10I RCCGGY 1 cut(s) 650
Csp6I GTAC 9 cut(s) 14, 587, 678, 1395, 1652, 1876, 1896, 2095, 2372
CspAI ACCGGT 1 cut(s) 650
CspCI CAANNNNNGTGG 2 cut(s) 598, 633
CviAII CATG 9 cut(s) 135, 709, 969, 1469, 1883, 2255, 2284, 2375, 2385
CviQI GTAC 9 cut(s) 14, 587, 678, 1395, 1652, 1876, 1896, 2095, 2372
DdeI CTNAG 9 cut(s) 282, 612, 700, 719, 766, 785, 1058, 1926, 2052
DpnI GATC 6 cut(s) 192, 526, 996, 1005, 1381, 1904
DpnII GATC 6 cut(s) 190, 524, 994, 1003, 1379, 1902
EaeI YGGCCR 1 cut(s) 1109
Eam1104I CTCTTC 6 cut(s) 670, 1340, 1518, 1881, 2160, 2325
EarI CTCTTC 6 cut(s) 670, 1340, 1518, 1881, 2160, 2325
Eco105I TACGTA 1 cut(s) 563
Eco130I CCWWGG 1 cut(s) 946
Eco147I AGGCCT 3 cut(s) 1277, 1477, 2249
Eco31I GGTCTC 2 cut(s) 443, 522
Eco32I GATATC 1 cut(s) 493
Eco47III AGCGCT 1 cut(s) 1386
Eco57I CTGAAG 2 cut(s) 888, 2184
Eco88I CYCGRG 2 cut(s) 832, 844
EcoRI GAATTC 1 cut(s) 1670
EcoRII CCWGG 1 cut(s) 481
EcoRV GATATC 1 cut(s) 493
EcoT14I CCWWGG 1 cut(s) 946
ErhI CCWWGG 1 cut(s) 946
FaeI CATG 9 cut(s) 138, 712, 972, 1472, 1886, 2258, 2287, 2378, 2388
FaqI GGGAC 5 cut(s) 1047, 1604, 1761, 1801, 2373
FatI CATG 9 cut(s) 134, 708, 968, 1468, 1882, 2254, 2283, 2374, 2384
FauI CCCGC 1 cut(s) 1253
FauNDI CATATG 2 cut(s) 884, 2349
Fnu4HI GCNGC 4 cut(s) 20, 273, 2114, 2131
FokI GGATG 3 cut(s) 1349, 1892, 2234
Fsp4HI GCNGC 4 cut(s) 20, 273, 2114, 2131
FspBI CTAG 7 cut(s) 53, 320, 771, 1640, 1763, 1940, 2117
GlaI GCGC 3 cut(s) 627, 1386, 1508
GluI GCNGC 4 cut(s) 20, 273, 2114, 2131
GsuI CTGGAG 4 cut(s) 393, 707, 874, 1131
HaeII RGCGCY 1 cut(s) 1388
HaeIII GGCC 5 cut(s) 958, 1111, 1277, 1477, 2249
HapII CCGG 5 cut(s) 651, 1025, 1334, 1459, 2062
HhaI GCGC 3 cut(s) 628, 1387, 1509
Hin1II CATG 9 cut(s) 138, 712, 972, 1472, 1886, 2258, 2287, 2378, 2388
Hin6I GCGC 3 cut(s) 626, 1385, 1507
HinP1I GCGC 3 cut(s) 626, 1385, 1507
HincII GTYRAC 2 cut(s) 622, 2233
HindII GTYRAC 2 cut(s) 622, 2233
HindIII AAGCTT 2 cut(s) 509, 1985
HpaII CCGG 5 cut(s) 651, 1025, 1334, 1459, 2062
HphI GGTGA 6 cut(s) 437, 586, 665, 733, 821, 2385
Hpy166II GTNNAC 6 cut(s) 290, 317, 622, 1588, 2095, 2233
Hpy8I GTNNAC 6 cut(s) 290, 317, 622, 1588, 2095, 2233
HpyCH4III ACNGT 5 cut(s) 13, 188, 314, 763, 932
HpyCH4IV ACGT 2 cut(s) 562, 1413
HpyF10VI GCNNNNNNNGC 6 cut(s) 25, 278, 565, 1964, 2139, 2409
HpyF3I CTNAG 9 cut(s) 282, 612, 700, 719, 766, 785, 1058, 1926, 2052
HpySE526I ACGT 2 cut(s) 562, 1413
Hsp92II CATG 9 cut(s) 138, 712, 972, 1472, 1886, 2258, 2287, 2378, 2388
HspAI GCGC 3 cut(s) 626, 1385, 1507
Kpn2I TCCGGA 2 cut(s) 1333, 2061
KpnI GGTACC 1 cut(s) 1398
Kzo9I GATC 6 cut(s) 190, 524, 994, 1003, 1379, 1902
LguI GCTCTTC 1 cut(s) 1518
LmnI GCTCC 2 cut(s) 98, 774
Lsp1109I GCAGC 4 cut(s) 6, 284, 2100, 2117
LweI GCATC 2 cut(s) 1080, 2212
MaeI CTAG 7 cut(s) 53, 320, 771, 1640, 1763, 1940, 2117
MaeII ACGT 2 cut(s) 562, 1413
MaeIII GTNAC 9 cut(s) 122, 425, 592, 641, 848, 1230, 1739, 1758, 1913
MalI GATC 6 cut(s) 192, 526, 996, 1005, 1381, 1904
MbiI CCGCTC 1 cut(s) 1756
MboI GATC 6 cut(s) 190, 524, 994, 1003, 1379, 1902
MflI RGATCY 1 cut(s) 994
MlsI TGGCCA 1 cut(s) 1111
MluI ACGCGT 1 cut(s) 1372
MluNI TGGCCA 1 cut(s) 1111
MlyI GAGTC 4 cut(s) 1069, 1490, 2005, 2223
MmeI TCCRAC 5 cut(s) 488, 1199, 1357, 1711, 1808
Mox20I TGGCCA 1 cut(s) 1111
MroI TCCGGA 2 cut(s) 1333, 2061
MroXI GAANNNNTTC 1 cut(s) 1670
MscI TGGCCA 1 cut(s) 1111
MslI CAYNNNNRTG 1 cut(s) 2053
Msp20I TGGCCA 1 cut(s) 1111
MspA1I CMGCKG 1 cut(s) 275
MspI CCGG 5 cut(s) 651, 1025, 1334, 1459, 2062
MspR9I CCNGG 1 cut(s) 483
Mva1269I GAATGC 1 cut(s) 2301
MvaI CCWGG 1 cut(s) 483
MvnI CGCG 3 cut(s) 339, 626, 1374
MwoI GCNNNNNNNGC 6 cut(s) 25, 278, 565, 1964, 2139, 2409
NdeI CATATG 2 cut(s) 884, 2349
NdeII GATC 6 cut(s) 190, 524, 994, 1003, 1379, 1902
NlaIII CATG 9 cut(s) 138, 712, 972, 1472, 1886, 2258, 2287, 2378, 2388
NlaIV GGNNCC 4 cut(s) 996, 1396, 2060, 2066
NmuCI GTSAC 5 cut(s) 425, 592, 641, 1739, 1913
NspI RCATGY 4 cut(s) 712, 972, 1472, 2378
NspV TTCGAA 1 cut(s) 542
OliI CACNNNNGTG 1 cut(s) 2053
PaeI GCATGC 1 cut(s) 972
PceI AGGCCT 3 cut(s) 1277, 1477, 2249
PciI ACATGT 3 cut(s) 708, 1468, 2374
PciSI GCTCTTC 1 cut(s) 1518
PcsI WCGNNNNNNNCGW 1 cut(s) 520
PctI GAATGC 1 cut(s) 2301
PdmI GAANNNNTTC 1 cut(s) 1670
PfeI GAWTC 8 cut(s) 56, 223, 362, 552, 656, 839, 1714, 1999
PflMI CCANNNNNTGG 1 cut(s) 243
PinAI ACCGGT 1 cut(s) 650
PkrI GCNGC 4 cut(s) 21, 274, 2115, 2132
PleI GAGTC 4 cut(s) 1068, 1490, 2005, 2222
PpsI GAGTC 4 cut(s) 1068, 1490, 2005, 2222
Ppu21I YACGTR 1 cut(s) 563
PscI ACATGT 3 cut(s) 708, 1468, 2374
Psp1406I AACGTT 1 cut(s) 1413
Psp6I CCWGG 1 cut(s) 481
PspGI CCWGG 1 cut(s) 481
PspN4I GGNNCC 4 cut(s) 996, 1396, 2060, 2066
PstI CTGCAG 3 cut(s) 121, 274, 2135
PstNI CAGNNNCTG 2 cut(s) 936, 1093
PsuI RGATCY 1 cut(s) 994
PvuII CAGCTG 1 cut(s) 275
RsaI GTAC 9 cut(s) 15, 588, 679, 1396, 1653, 1877, 1897, 2096, 2373
RsaNI GTAC 9 cut(s) 14, 587, 678, 1395, 1652, 1876, 1896, 2095, 2372
RseI CAYNNNNRTG 1 cut(s) 2053
SapI GCTCTTC 1 cut(s) 1518
SatI GCNGC 4 cut(s) 20, 273, 2114, 2131
Sau3AI GATC 6 cut(s) 190, 524, 994, 1003, 1379, 1902
SchI GAGTC 4 cut(s) 1069, 1490, 2005, 2223
ScrFI CCNGG 1 cut(s) 483
SfaNI GCATC 2 cut(s) 1080, 2212
SfcI CTRYAG 5 cut(s) 117, 270, 276, 1428, 2131
SfuI TTCGAA 1 cut(s) 542
SmiMI CAYNNNNRTG 1 cut(s) 2053
SmlI CTYRAG 1 cut(s) 1777
SmoI CTYRAG 1 cut(s) 1777
SnaBI TACGTA 1 cut(s) 563
SpeI ACTAGT 2 cut(s) 319, 1762
SphI GCATGC 1 cut(s) 972
SseBI AGGCCT 3 cut(s) 1277, 1477, 2249
SsiI CCGC 5 cut(s) 339, 1260, 1325, 1756, 2200
SspI AATATT 1 cut(s) 1599
SspMI CTAG 7 cut(s) 53, 320, 771, 1640, 1763, 1940, 2117
StuI AGGCCT 3 cut(s) 1277, 1477, 2249
StyD4I CCNGG 1 cut(s) 481
StyI CCWWGG 1 cut(s) 946
TaaI ACNGT 5 cut(s) 13, 188, 314, 763, 932
TaiI ACGT 2 cut(s) 565, 1416
TaqI TCGA 8 cut(s) 172, 180, 495, 542, 555, 2088, 2208, 2323
TaqII GACCGA 1 cut(s) 504
TatI WGTACW 4 cut(s) 586, 1875, 2094, 2371
TfiI GAWTC 8 cut(s) 56, 223, 362, 552, 656, 839, 1714, 1999
TscAI CASTG 7 cut(s) 193, 319, 616, 876, 1629, 1635, 2410
TseFI GTSAC 5 cut(s) 425, 592, 641, 1739, 1913
TseI GCWGC 4 cut(s) 19, 272, 2113, 2130
Tsp45I GTSAC 5 cut(s) 425, 592, 641, 1739, 1913
TspDTI ATGAA 7 cut(s) 1021, 1095, 1270, 1441, 1536, 1899, 2012
TspGWI ACGGA 4 cut(s) 996, 1118, 1694, 1869
TspRI CASTG 7 cut(s) 193, 319, 616, 876, 1629, 1635, 2410
Van91I CCANNNNNTGG 1 cut(s) 243
XapI RAATTY 2 cut(s) 298, 1670
XbaI TCTAGA 2 cut(s) 52, 1939
XceI RCATGY 4 cut(s) 712, 972, 1472, 2378
XcmI CCANNNNNNNNNTGG 1 cut(s) 77
XmnI GAANNNNTTC 1 cut(s) 1670
XspI CTAG 7 cut(s) 53, 320, 771, 1640, 1763, 1940, 2117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.